ENCSR759QKO
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RBM25
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RBM25 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RBM25
Analysis
View Data Processing
Analysis page is available for ENCSR759QKO.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.4 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF066NPP | ENCFF066NPP.fastq | fastq (reads) | reads | 591.5 MB | link | ||
| ENCFF353VKL | ENCFF353VKL.fastq | fastq (reads) | reads | 448.8 MB | link | ||
| ENCFF410QTN | ENCFF410QTN.fastq | fastq (reads) | reads | 465.1 MB | link | ||
| ENCFF701SYD | ENCFF701SYD.fastq | fastq (reads) | reads | 462.3 MB | link | ||
| ENCFF897ZRK | ENCFF897ZRK.fastq | fastq (reads) | reads | 448.7 MB | link | ||
| ENCFF135TEV | ENCFF135TEV.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF170PGF | ENCFF170PGF.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF485TKI | ENCFF485TKI.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF872SLK | ENCFF872SLK.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF252CDY | ENCFF252CDY.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF514QXS | ENCFF514QXS.tsv | tsv (library fraction) | library fraction | 63.7 KB | link | ||
| ENCFF556OQE | ENCFF556OQE.tsv | tsv (library fraction) | library fraction | 265.7 KB | link | ||
| ENCFF713WFE | ENCFF713WFE.tsv | tsv (library fraction) | library fraction | 15.0 KB | link |