ENCSR229VBP
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RALYL
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RALYL in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RALYL
Analysis
View Data Processing
Analysis page is available for ENCSR229VBP.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.0 GBFiles: 12
Unique ENC file IDs: 12
File Formats
tsv (8)
fastq (4)
Output types (3)
enrichment (4)
library fraction (4)
reads (4)
Linked Publications (1)
Data Files (12)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF345AMU | ENCFF345AMU.fastq | fastq (reads) | reads | 645.4 MB | link | ||
| ENCFF432AZE | ENCFF432AZE.fastq | fastq (reads) | reads | 584.8 MB | link | ||
| ENCFF464RSK | ENCFF464RSK.fastq | fastq (reads) | reads | 502.5 MB | link | ||
| ENCFF532TOJ | ENCFF532TOJ.fastq | fastq (reads) | reads | 314.1 MB | link | ||
| ENCFF338FGB | ENCFF338FGB.tsv | tsv (enrichment) | enrichment | 8.3 KB | link | ||
| ENCFF449PEQ | ENCFF449PEQ.tsv | tsv (enrichment) | enrichment | 576.1 KB | link | ||
| ENCFF524JIG | ENCFF524JIG.tsv | tsv (enrichment) | enrichment | 140.0 KB | link | ||
| ENCFF889PPG | ENCFF889PPG.tsv | tsv (enrichment) | enrichment | 34.0 KB | link | ||
| ENCFF270JEN | ENCFF270JEN.tsv | tsv (library fraction) | library fraction | 217.9 KB | link | ||
| ENCFF378TGV | ENCFF378TGV.tsv | tsv (library fraction) | library fraction | 888.9 KB | link | ||
| ENCFF398QRT | ENCFF398QRT.tsv | tsv (library fraction) | library fraction | 12.4 KB | link | ||
| ENCFF927RWU | ENCFF927RWU.tsv | tsv (library fraction) | library fraction | 52.4 KB | link |