ENCSR368NMO
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against HNRNPK
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of HNRNPK in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against HNRNPK
Analysis
View Data Processing
Analysis page is available for ENCSR368NMO.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.2 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (6)
fastq (5)
bed (2)
Output types (4)
reads (5)
enrichment (3)
library fraction (3)
peaks (2)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF298QFN | ENCFF298QFN.bed | bed (peaks) | peaks | 235.1 KB | link | ||
| ENCFF813TVN | ENCFF813TVN.bed | bed (peaks) | peaks | 426.0 KB | link | ||
| ENCFF004OKN | ENCFF004OKN.fastq | fastq (reads) | reads | 292.5 MB | link | ||
| ENCFF261ZHZ | ENCFF261ZHZ.fastq | fastq (reads) | reads | 231.3 MB | link | ||
| ENCFF281CNE | ENCFF281CNE.fastq | fastq (reads) | reads | 245.1 MB | link | ||
| ENCFF674RCB | ENCFF674RCB.fastq | fastq (reads) | reads | 285.2 MB | link | ||
| ENCFF732XFP | ENCFF732XFP.fastq | fastq (reads) | reads | 195.9 MB | link | ||
| ENCFF346XPF | ENCFF346XPF.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF574ANJ | ENCFF574ANJ.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF715DIL | ENCFF715DIL.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF595IBV | ENCFF595IBV.tsv | tsv (library fraction) | library fraction | 15.2 KB | link | ||
| ENCFF775OKJ | ENCFF775OKJ.tsv | tsv (library fraction) | library fraction | 265.1 KB | link | ||
| ENCFF850EVL | ENCFF850EVL.tsv | tsv (library fraction) | library fraction | 64.0 KB | link |