ENCSR252RIJ
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against SRSF4
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of SRSF4 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against SRSF4
Analysis
View Data Processing
Analysis page is available for ENCSR252RIJ.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.1 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF424VHK | ENCFF424VHK.fastq | fastq (reads) | reads | 207.8 MB | link | ||
| ENCFF659GOB | ENCFF659GOB.fastq | fastq (reads) | reads | 188.7 MB | link | ||
| ENCFF695JWD | ENCFF695JWD.fastq | fastq (reads) | reads | 283.4 MB | link | ||
| ENCFF707DGD | ENCFF707DGD.fastq | fastq (reads) | reads | 225.4 MB | link | ||
| ENCFF801NRU | ENCFF801NRU.fastq | fastq (reads) | reads | 212.3 MB | link | ||
| ENCFF166TCK | ENCFF166TCK.tsv | tsv (enrichment) | enrichment | 992.0 KB | link | ||
| ENCFF185UAE | ENCFF185UAE.tsv | tsv (enrichment) | enrichment | 60.0 KB | link | ||
| ENCFF298ZWZ | ENCFF298ZWZ.tsv | tsv (enrichment) | enrichment | 14.8 KB | link | ||
| ENCFF975KOB | ENCFF975KOB.tsv | tsv (enrichment) | enrichment | 244.0 KB | link | ||
| ENCFF225NRS | ENCFF225NRS.tsv | tsv (library fraction) | library fraction | 75.1 KB | link | ||
| ENCFF661GML | ENCFF661GML.tsv | tsv (library fraction) | library fraction | 17.8 KB | link | ||
| ENCFF773PVD | ENCFF773PVD.tsv | tsv (library fraction) | library fraction | 1.2 MB | link | ||
| ENCFF908WYK | ENCFF908WYK.tsv | tsv (library fraction) | library fraction | 313.3 KB | link |