ENCSR082AKW
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against ESRP1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of ESRP1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against ESRP1
Analysis
View Data Processing
Analysis page is available for ENCSR082AKW.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.0 GBFiles: 11
Unique ENC file IDs: 11
File Formats
tsv (6)
fastq (5)
Output types (3)
reads (5)
enrichment (3)
library fraction (3)
Linked Publications (1)
Data Files (11)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF201IIS | ENCFF201IIS.fastq | fastq (reads) | reads | 203.7 MB | link | ||
| ENCFF249MKN | ENCFF249MKN.fastq | fastq (reads) | reads | 222.8 MB | link | ||
| ENCFF497OVV | ENCFF497OVV.fastq | fastq (reads) | reads | 226.8 MB | link | ||
| ENCFF709NVS | ENCFF709NVS.fastq | fastq (reads) | reads | 213.0 MB | link | ||
| ENCFF866SSJ | ENCFF866SSJ.fastq | fastq (reads) | reads | 206.1 MB | link | ||
| ENCFF193SAI | ENCFF193SAI.tsv | tsv (enrichment) | enrichment | 60.0 KB | link | ||
| ENCFF841SRB | ENCFF841SRB.tsv | tsv (enrichment) | enrichment | 244.0 KB | link | ||
| ENCFF924ZUX | ENCFF924ZUX.tsv | tsv (enrichment) | enrichment | 14.8 KB | link | ||
| ENCFF069CQR | ENCFF069CQR.tsv | tsv (library fraction) | library fraction | 75.2 KB | link | ||
| ENCFF437RJK | ENCFF437RJK.tsv | tsv (library fraction) | library fraction | 17.8 KB | link | ||
| ENCFF830CCN | ENCFF830CCN.tsv | tsv (library fraction) | library fraction | 313.1 KB | link |