ENCSR170PBM
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against HNRNPA0
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of HNRNPA0 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against HNRNPA0
Analysis
View Data Processing
Analysis page is available for ENCSR170PBM.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.9 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF114JMF | ENCFF114JMF.fastq | fastq (reads) | reads | 367.5 MB | link | ||
| ENCFF156FZK | ENCFF156FZK.fastq | fastq (reads) | reads | 353.5 MB | link | ||
| ENCFF210HCF | ENCFF210HCF.fastq | fastq (reads) | reads | 509.0 MB | link | ||
| ENCFF373FBO | ENCFF373FBO.fastq | fastq (reads) | reads | 433.4 MB | link | ||
| ENCFF836VGG | ENCFF836VGG.fastq | fastq (reads) | reads | 297.0 MB | link | ||
| ENCFF314LDN | ENCFF314LDN.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF372WVS | ENCFF372WVS.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF541BLM | ENCFF541BLM.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF626WPP | ENCFF626WPP.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF243RRA | ENCFF243RRA.tsv | tsv (library fraction) | library fraction | 265.2 KB | link | ||
| ENCFF872NAF | ENCFF872NAF.tsv | tsv (library fraction) | library fraction | 64.1 KB | link | ||
| ENCFF975HUX | ENCFF975HUX.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF992KEZ | ENCFF992KEZ.tsv | tsv (library fraction) | library fraction | 15.2 KB | link |