ENCSR275JFN
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against SRSF2
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of SRSF2 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against SRSF2
Analysis
View Data Processing
Analysis page is available for ENCSR275JFN.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.8 GBFiles: 11
Unique ENC file IDs: 11
File Formats
tsv (6)
fastq (5)
Output types (3)
reads (5)
enrichment (3)
library fraction (3)
Linked Publications (1)
Data Files (11)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF044HZO | ENCFF044HZO.fastq | fastq (reads) | reads | 237.3 MB | link | ||
| ENCFF203RCX | ENCFF203RCX.fastq | fastq (reads) | reads | 461.9 MB | link | ||
| ENCFF395BSA | ENCFF395BSA.fastq | fastq (reads) | reads | 372.2 MB | link | ||
| ENCFF427KXG | ENCFF427KXG.fastq | fastq (reads) | reads | 467.3 MB | link | ||
| ENCFF443RLZ | ENCFF443RLZ.fastq | fastq (reads) | reads | 310.6 MB | link | ||
| ENCFF257EQJ | ENCFF257EQJ.tsv | tsv (enrichment) | enrichment | 11.8 KB | link | ||
| ENCFF573MYB | ENCFF573MYB.tsv | tsv (enrichment) | enrichment | 196.0 KB | link | ||
| ENCFF900EPD | ENCFF900EPD.tsv | tsv (enrichment) | enrichment | 48.0 KB | link | ||
| ENCFF289NBX | ENCFF289NBX.tsv | tsv (library fraction) | library fraction | 18.4 KB | link | ||
| ENCFF395YYT | ENCFF395YYT.tsv | tsv (library fraction) | library fraction | 311.9 KB | link | ||
| ENCFF616GTT | ENCFF616GTT.tsv | tsv (library fraction) | library fraction | 76.1 KB | link |