ENCSR626INQ
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RBM45
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RBM45 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RBM45
Analysis
View Data Processing
Analysis page is available for ENCSR626INQ.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.6 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF294KSP | ENCFF294KSP.fastq | fastq (reads) | reads | 398.1 MB | link | ||
| ENCFF303TMB | ENCFF303TMB.fastq | fastq (reads) | reads | 274.0 MB | link | ||
| ENCFF575BTH | ENCFF575BTH.fastq | fastq (reads) | reads | 566.9 MB | link | ||
| ENCFF660MFW | ENCFF660MFW.fastq | fastq (reads) | reads | 781.9 MB | link | ||
| ENCFF902WXY | ENCFF902WXY.fastq | fastq (reads) | reads | 589.7 MB | link | ||
| ENCFF275UGA | ENCFF275UGA.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF311UQL | ENCFF311UQL.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF453IBG | ENCFF453IBG.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF782DRP | ENCFF782DRP.tsv | tsv (enrichment) | enrichment | 688.1 KB | link | ||
| ENCFF084XGB | ENCFF084XGB.tsv | tsv (library fraction) | library fraction | 265.0 KB | link | ||
| ENCFF143OQS | ENCFF143OQS.tsv | tsv (library fraction) | library fraction | 15.4 KB | link | ||
| ENCFF466QPM | ENCFF466QPM.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF631VOL | ENCFF631VOL.tsv | tsv (library fraction) | library fraction | 64.4 KB | link |