ENCSR914PGB
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against SRSF5
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of SRSF5 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against SRSF5
Analysis
View Data Processing
Analysis page is available for ENCSR914PGB.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.4 GBFiles: 11
Unique ENC file IDs: 11
File Formats
tsv (6)
fastq (5)
Output types (3)
reads (5)
enrichment (3)
library fraction (3)
Linked Publications (1)
Data Files (11)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF130TEX | ENCFF130TEX.fastq | fastq (reads) | reads | 559.4 MB | link | ||
| ENCFF229OOD | ENCFF229OOD.fastq | fastq (reads) | reads | 405.6 MB | link | ||
| ENCFF388IAE | ENCFF388IAE.fastq | fastq (reads) | reads | 565.5 MB | link | ||
| ENCFF804SHE | ENCFF804SHE.fastq | fastq (reads) | reads | 537.7 MB | link | ||
| ENCFF901VZV | ENCFF901VZV.fastq | fastq (reads) | reads | 364.2 MB | link | ||
| ENCFF351IBT | ENCFF351IBT.tsv | tsv (enrichment) | enrichment | 244.0 KB | link | ||
| ENCFF762GOC | ENCFF762GOC.tsv | tsv (enrichment) | enrichment | 60.0 KB | link | ||
| ENCFF842OMI | ENCFF842OMI.tsv | tsv (enrichment) | enrichment | 14.8 KB | link | ||
| ENCFF214SJB | ENCFF214SJB.tsv | tsv (library fraction) | library fraction | 75.2 KB | link | ||
| ENCFF478NNJ | ENCFF478NNJ.tsv | tsv (library fraction) | library fraction | 313.1 KB | link | ||
| ENCFF977YCA | ENCFF977YCA.tsv | tsv (library fraction) | library fraction | 17.9 KB | link |