ENCSR191PTZ
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against PRR3
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of PRR3 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against PRR3
Analysis
View Data Processing
Analysis page is available for ENCSR191PTZ.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.0 GBFiles: 16
Unique ENC file IDs: 16
File Formats
tsv (11)
fastq (5)
Output types (3)
enrichment (7)
reads (5)
library fraction (4)
Linked Publications (1)
Data Files (16)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF002RAY | ENCFF002RAY.fastq | fastq (reads) | reads | 418.2 MB | link | ||
| ENCFF016DMQ | ENCFF016DMQ.fastq | fastq (reads) | reads | 372.7 MB | link | ||
| ENCFF305FZN | ENCFF305FZN.fastq | fastq (reads) | reads | 378.8 MB | link | ||
| ENCFF584IYE | ENCFF584IYE.fastq | fastq (reads) | reads | 389.0 MB | link | ||
| ENCFF859IFZ | ENCFF859IFZ.fastq | fastq (reads) | reads | 500.8 MB | link | ||
| ENCFF373IHG | ENCFF373IHG.tsv | tsv (enrichment) | enrichment | 168.1 KB | link | ||
| ENCFF466EQG | ENCFF466EQG.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF492NKP | ENCFF492NKP.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF672EUE | ENCFF672EUE.tsv | tsv (enrichment) | enrichment | 131.0 B | link | ||
| ENCFF688ATJ | ENCFF688ATJ.tsv | tsv (enrichment) | enrichment | 247.0 B | link | ||
| ENCFF744ZDN | ENCFF744ZDN.tsv | tsv (enrichment) | enrichment | 688.2 KB | link | ||
| ENCFF984XGE | ENCFF984XGE.tsv | tsv (enrichment) | enrichment | 109.0 B | link | ||
| ENCFF188LWK | ENCFF188LWK.tsv | tsv (library fraction) | library fraction | 64.7 KB | link | ||
| ENCFF245OMP | ENCFF245OMP.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF281FSW | ENCFF281FSW.tsv | tsv (library fraction) | library fraction | 265.2 KB | link | ||
| ENCFF897OZY | ENCFF897OZY.tsv | tsv (library fraction) | library fraction | 15.6 KB | link |