ENCSR315VQD
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against ZFP36
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of ZFP36 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against ZFP36
Analysis
View Data Processing
Analysis page is available for ENCSR315VQD.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.9 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF006ZXM | ENCFF006ZXM.fastq | fastq (reads) | reads | 497.1 MB | link | ||
| ENCFF089AAP | ENCFF089AAP.fastq | fastq (reads) | reads | 463.0 MB | link | ||
| ENCFF113XPZ | ENCFF113XPZ.fastq | fastq (reads) | reads | 1.1 GB | link | ||
| ENCFF149ZPE | ENCFF149ZPE.fastq | fastq (reads) | reads | 517.0 MB | link | ||
| ENCFF248KPL | ENCFF248KPL.fastq | fastq (reads) | reads | 396.5 MB | link | ||
| ENCFF170BKQ | ENCFF170BKQ.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF193EMA | ENCFF193EMA.tsv | tsv (enrichment) | enrichment | 688.1 KB | link | ||
| ENCFF522CPG | ENCFF522CPG.tsv | tsv (enrichment) | enrichment | 168.1 KB | link | ||
| ENCFF735TCL | ENCFF735TCL.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF151RNY | ENCFF151RNY.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF633DXF | ENCFF633DXF.tsv | tsv (library fraction) | library fraction | 265.4 KB | link | ||
| ENCFF744DNT | ENCFF744DNT.tsv | tsv (library fraction) | library fraction | 15.3 KB | link | ||
| ENCFF916BLW | ENCFF916BLW.tsv | tsv (library fraction) | library fraction | 64.5 KB | link |