ENCSR073DSH
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against SRSF11
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of SRSF11 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against SRSF11
Analysis
View Data Processing
Analysis page is available for ENCSR073DSH.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.3 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF040OXG | ENCFF040OXG.fastq | fastq (reads) | reads | 485.0 MB | link | ||
| ENCFF205NWX | ENCFF205NWX.fastq | fastq (reads) | reads | 488.1 MB | link | ||
| ENCFF795EEX | ENCFF795EEX.fastq | fastq (reads) | reads | 408.0 MB | link | ||
| ENCFF828WZL | ENCFF828WZL.fastq | fastq (reads) | reads | 558.8 MB | link | ||
| ENCFF877DUW | ENCFF877DUW.fastq | fastq (reads) | reads | 439.3 MB | link | ||
| ENCFF260EGH | ENCFF260EGH.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF431TKD | ENCFF431TKD.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF621BGN | ENCFF621BGN.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF820GEE | ENCFF820GEE.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF186POK | ENCFF186POK.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF206YND | ENCFF206YND.tsv | tsv (library fraction) | library fraction | 15.2 KB | link | ||
| ENCFF279RSC | ENCFF279RSC.tsv | tsv (library fraction) | library fraction | 63.9 KB | link | ||
| ENCFF283VSZ | ENCFF283VSZ.tsv | tsv (library fraction) | library fraction | 265.3 KB | link |