ENCSR421UDF
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RBFOX3
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RBFOX3 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RBFOX3
Analysis
View Data Processing
Analysis page is available for ENCSR421UDF.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 4.0 GBFiles: 26
Unique ENC file IDs: 13
File Formats
tsv (16)
fastq (10)
Output types (3)
reads (10)
enrichment (8)
library fraction (8)
Linked Publications (1)
Data Files (26)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF405QFZ | ENCFF405QFZ.fastq | fastq (reads) | reads | 466.2 MB | link | ||
| ENCFF405QFZ | ENCFF405QFZ.fastq | fastq (reads) | reads | 466.2 MB | link | ||
| ENCFF629DZC | ENCFF629DZC.fastq | fastq (reads) | reads | 411.2 MB | link | ||
| ENCFF629DZC | ENCFF629DZC.fastq | fastq (reads) | reads | 411.2 MB | link | ||
| ENCFF719LOX | ENCFF719LOX.fastq | fastq (reads) | reads | 445.6 MB | link | ||
| ENCFF719LOX | ENCFF719LOX.fastq | fastq (reads) | reads | 445.6 MB | link | ||
| ENCFF942RUM | ENCFF942RUM.fastq | fastq (reads) | reads | 382.7 MB | link | ||
| ENCFF942RUM | ENCFF942RUM.fastq | fastq (reads) | reads | 382.7 MB | link | ||
| ENCFF963SOG | ENCFF963SOG.fastq | fastq (reads) | reads | 339.3 MB | link | ||
| ENCFF963SOG | ENCFF963SOG.fastq | fastq (reads) | reads | 339.3 MB | link | ||
| ENCFF108IBF | ENCFF108IBF.tsv | tsv (enrichment) | enrichment | 168.1 KB | link | ||
| ENCFF108IBF | ENCFF108IBF.tsv | tsv (enrichment) | enrichment | 168.1 KB | link | ||
| ENCFF111IQQ | ENCFF111IQQ.tsv | tsv (enrichment) | enrichment | 41.1 KB | link | ||
| ENCFF111IQQ | ENCFF111IQQ.tsv | tsv (enrichment) | enrichment | 41.1 KB | link | ||
| ENCFF536WVL | ENCFF536WVL.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF536WVL | ENCFF536WVL.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF952BVQ | ENCFF952BVQ.tsv | tsv (enrichment) | enrichment | 688.3 KB | link | ||
| ENCFF952BVQ | ENCFF952BVQ.tsv | tsv (enrichment) | enrichment | 688.3 KB | link | ||
| ENCFF150YMO | ENCFF150YMO.tsv | tsv (library fraction) | library fraction | 265.3 KB | link | ||
| ENCFF150YMO | ENCFF150YMO.tsv | tsv (library fraction) | library fraction | 265.3 KB | link | ||
| ENCFF247CQR | ENCFF247CQR.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF247CQR | ENCFF247CQR.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF411LYJ | ENCFF411LYJ.tsv | tsv (library fraction) | library fraction | 64.5 KB | link | ||
| ENCFF411LYJ | ENCFF411LYJ.tsv | tsv (library fraction) | library fraction | 64.5 KB | link | ||
| ENCFF518RZJ | ENCFF518RZJ.tsv | tsv (library fraction) | library fraction | 15.5 KB | link | ||
| ENCFF518RZJ | ENCFF518RZJ.tsv | tsv (library fraction) | library fraction | 15.5 KB | link |