ENCSR769AEI
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against PCBP4
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of PCBP4 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against PCBP4
Analysis
View Data Processing
Analysis page is available for ENCSR769AEI.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.5 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF024KDW | ENCFF024KDW.fastq | fastq (reads) | reads | 445.7 MB | link | ||
| ENCFF065MZA | ENCFF065MZA.fastq | fastq (reads) | reads | 261.4 MB | link | ||
| ENCFF814SIC | ENCFF814SIC.fastq | fastq (reads) | reads | 273.9 MB | link | ||
| ENCFF871CCW | ENCFF871CCW.fastq | fastq (reads) | reads | 307.9 MB | link | ||
| ENCFF922HKT | ENCFF922HKT.fastq | fastq (reads) | reads | 219.5 MB | link | ||
| ENCFF239XFN | ENCFF239XFN.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF536CUG | ENCFF536CUG.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF549QKX | ENCFF549QKX.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF661CYO | ENCFF661CYO.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF005EAZ | ENCFF005EAZ.tsv | tsv (library fraction) | library fraction | 15.1 KB | link | ||
| ENCFF305FFO | ENCFF305FFO.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF780YHK | ENCFF780YHK.tsv | tsv (library fraction) | library fraction | 265.6 KB | link | ||
| ENCFF844KLM | ENCFF844KLM.tsv | tsv (library fraction) | library fraction | 63.8 KB | link |