ENCSR084YCO
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against CPEB1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of CPEB1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against CPEB1
Analysis
View Data Processing
Analysis page is available for ENCSR084YCO.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.8 GBFiles: 14
Unique ENC file IDs: 14
File Formats
tsv (9)
fastq (5)
Output types (3)
enrichment (5)
reads (5)
library fraction (4)
Linked Publications (1)
Data Files (14)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF013YVD | ENCFF013YVD.fastq | fastq (reads) | reads | 811.7 MB | link | ||
| ENCFF808XIS | ENCFF808XIS.fastq | fastq (reads) | reads | 611.7 MB | link | ||
| ENCFF859RIY | ENCFF859RIY.fastq | fastq (reads) | reads | 518.2 MB | link | ||
| ENCFF903JOE | ENCFF903JOE.fastq | fastq (reads) | reads | 471.9 MB | link | ||
| ENCFF960JKZ | ENCFF960JKZ.fastq | fastq (reads) | reads | 432.2 MB | link | ||
| ENCFF313SEU | ENCFF313SEU.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF473SQY | ENCFF473SQY.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF487PLP | ENCFF487PLP.tsv | tsv (enrichment) | enrichment | 131.0 B | link | ||
| ENCFF745KUY | ENCFF745KUY.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF884AFI | ENCFF884AFI.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF604BFV | ENCFF604BFV.tsv | tsv (library fraction) | library fraction | 15.1 KB | link | ||
| ENCFF670HNQ | ENCFF670HNQ.tsv | tsv (library fraction) | library fraction | 265.7 KB | link | ||
| ENCFF734WNH | ENCFF734WNH.tsv | tsv (library fraction) | library fraction | 63.6 KB | link | ||
| ENCFF742NAC | ENCFF742NAC.tsv | tsv (library fraction) | library fraction | 1.1 MB | link |