ENCSR728SXZ
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RC3H1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RC3H1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RC3H1
Analysis
View Data Processing
Analysis page is available for ENCSR728SXZ.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 3.1 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF189FRP | ENCFF189FRP.fastq | fastq (reads) | reads | 705.5 MB | link | ||
| ENCFF393MNZ | ENCFF393MNZ.fastq | fastq (reads) | reads | 546.8 MB | link | ||
| ENCFF540SRD | ENCFF540SRD.fastq | fastq (reads) | reads | 744.1 MB | link | ||
| ENCFF607ZLL | ENCFF607ZLL.fastq | fastq (reads) | reads | 710.8 MB | link | ||
| ENCFF732QEB | ENCFF732QEB.fastq | fastq (reads) | reads | 512.9 MB | link | ||
| ENCFF083LIF | ENCFF083LIF.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF140TLP | ENCFF140TLP.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF661BCA | ENCFF661BCA.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF792ROS | ENCFF792ROS.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF099SQP | ENCFF099SQP.tsv | tsv (library fraction) | library fraction | 265.3 KB | link | ||
| ENCFF222OVF | ENCFF222OVF.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF597IYF | ENCFF597IYF.tsv | tsv (library fraction) | library fraction | 63.7 KB | link | ||
| ENCFF870TDL | ENCFF870TDL.tsv | tsv (library fraction) | library fraction | 15.1 KB | link |