ENCSR934TDK
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against A1CF
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of A1CF in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against A1CF
Analysis
View Data Processing
Analysis page is available for ENCSR934TDK.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.5 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF187MDO | ENCFF187MDO.fastq | fastq (reads) | reads | 386.0 MB | link | ||
| ENCFF194FOG | ENCFF194FOG.fastq | fastq (reads) | reads | 639.5 MB | link | ||
| ENCFF274IJN | ENCFF274IJN.fastq | fastq (reads) | reads | 516.0 MB | link | ||
| ENCFF305UGG | ENCFF305UGG.fastq | fastq (reads) | reads | 385.9 MB | link | ||
| ENCFF884QIH | ENCFF884QIH.fastq | fastq (reads) | reads | 656.2 MB | link | ||
| ENCFF672ZPY | ENCFF672ZPY.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF902SNR | ENCFF902SNR.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF921OBL | ENCFF921OBL.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF943MNY | ENCFF943MNY.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF017ISP | ENCFF017ISP.tsv | tsv (library fraction) | library fraction | 64.4 KB | link | ||
| ENCFF107SCR | ENCFF107SCR.tsv | tsv (library fraction) | library fraction | 265.0 KB | link | ||
| ENCFF630YWR | ENCFF630YWR.tsv | tsv (library fraction) | library fraction | 15.5 KB | link | ||
| ENCFF708DPS | ENCFF708DPS.tsv | tsv (library fraction) | library fraction | 1.1 MB | link |