GSE286096
GSE GEOInvestigating m6A-relevant gene function in neural progenitor cells using CRISPR-Cas9 genome editing and RNA-seq
Organism:
Homo sapiens
Platform:
GPL24676
Samples:
66
Summary
This study explores the functional role of m6A-relevant genes in neural progenitor cells (NPCs) derived from iPSCs using CRISPR-Cas9-mediated genome editing. NPCs were generated from XCL-1 iPSCs and cultured in defined conditions before establishing constitutive Cas9 expression. Synthetic guide RNAs targeting eight m6A-relevant genes (FMR1, FTO, METTL14, METTL3, WTAP, YTHDF1, YTHDF2, and YTHDF3) and non-targeting controls were introduced via lipofection. The genome editing efficiency was quantified using T7 Endonuclease I assays and sequencing. RNA-seq analysis was performed to profile transcriptomic changes associated with each knockout condition. Differential expression analysis identified significant transcriptional alterations, providing insights into m6A-regulated pathways. This work highlights the molecular impact of m6A-relevant gene disruptions in neural progenitor cells, offering a foundation for understanding their roles in neural development and disease.
Overall Design
RNA-seq profiling was conducted on neural progenitor cells (NPCs) and their CRISPR-Cas9 knockout derivatives targeting eight m6A-relevant genes (FMR1, FTO, METTL14, METTL3, WTAP, YTHDF1, YTHDF2, and YTHDF3), as well as on non-targeting (NT) controls.
Analysis
View Data Processing
Analysis page is available for GSE286096.
Supplementary Files (2)
GEO Samples (66)
GSM8717638
GSM8717639
GSM8717640
GSM8717641
GSM8717642
GSM8717643
GSM8717644
GSM8717645
GSM8717646
GSM8717647
GSM8717648
GSM8717649
GSM8717650
GSM8717651
GSM8717652
GSM8717653
GSM8717654
GSM8717655
GSM8717656
GSM8717657
GSM8717658
GSM8717659
GSM8717660
GSM8717661
GSM8717662
GSM8717663
GSM8717664
GSM8717665
GSM8717666
GSM8717667
GSM8717668
GSM8717669
GSM8717670
GSM8717671
GSM8717672
GSM8717673
GSM8717674
GSM8717675
GSM8717676
GSM8717677
GSM8717678
GSM8717679
GSM8717680
GSM8717681
GSM8717682
GSM8717683
GSM8717684
GSM8717685
GSM8717686
GSM8717687
GSM8717688
GSM8717689
GSM8717690
GSM8717691
GSM8717692
GSM8717693
GSM8717694
GSM8717695
GSM8717696
GSM8717697
GSM8717698
GSM8717699
GSM8717700
GSM8717701
GSM8717702
GSM8717703
SRA Experiments (66) and Runs (66)
Total: 168143 MBSample: SRS23726884
BioProject: PRJNA1207914
BioSample: SAMN46158364
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926257 | 27585312 | 8088159445 | 2636.0 | SRA |
Sample: SRS23726885
BioProject: PRJNA1207914
BioSample: SAMN46158363
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926256 | 20118774 | 5997838882 | 2138.0 | SRA |
Sample: SRS23726886
BioProject: PRJNA1207914
BioSample: SAMN46158362
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926255 | 20676462 | 6164990829 | 2135.0 | SRA |
Sample: SRS23726887
BioProject: PRJNA1207914
BioSample: SAMN46158360
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926254 | 18662552 | 5591414256 | 1920.0 | SRA |
Sample: SRS23726888
BioProject: PRJNA1207914
BioSample: SAMN46158359
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926253 | 17829479 | 5335556638 | 1837.0 | SRA |
Sample: SRS23726889
BioProject: PRJNA1207914
BioSample: SAMN46158358
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926252 | 26503330 | 7913987490 | 2554.0 | SRA |
Sample: SRS23726890
BioProject: PRJNA1207914
BioSample: SAMN46158357
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926251 | 32632027 | 9730787315 | 3141.0 | SRA |
Sample: SRS23726891
BioProject: PRJNA1207914
BioSample: SAMN46158356
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926250 | 36701981 | 10986741467 | 3568.0 | SRA |
Sample: SRS23726892
BioProject: PRJNA1207914
BioSample: SAMN46158354
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926249 | 24715420 | 7363375913 | 2421.0 | SRA |
Sample: SRS23726893
BioProject: PRJNA1207914
BioSample: SAMN46158353
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926248 | 26916713 | 8032590288 | 2794.0 | SRA |
Sample: SRS23726894
BioProject: PRJNA1207914
BioSample: SAMN46158352
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926247 | 24158567 | 7210724905 | 2485.0 | SRA |
Sample: SRS23726895
BioProject: PRJNA1207914
BioSample: SAMN46158351
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926246 | 26981219 | 8031172571 | 2758.0 | SRA |
Sample: SRS23726896
BioProject: PRJNA1207914
BioSample: SAMN46158350
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926245 | 34676485 | 10303426429 | 3518.0 | SRA |
Sample: SRS23726897
BioProject: PRJNA1207914
BioSample: SAMN46158348
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926244 | 14522122 | 4132001601 | 1369.0 | SRA |
Sample: SRS23726898
BioProject: PRJNA1207914
BioSample: SAMN46158347
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926243 | 17608090 | 5254311044 | 1863.0 | SRA |
Sample: SRS23726899
BioProject: PRJNA1207914
BioSample: SAMN46158346
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926242 | 21413606 | 6405947704 | 2216.0 | SRA |
Sample: SRS23726900
BioProject: PRJNA1207914
BioSample: SAMN46158345
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926241 | 24414304 | 7250450219 | 2452.0 | SRA |
Sample: SRS23726901
BioProject: PRJNA1207914
BioSample: SAMN46158344
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926240 | 23783850 | 7102071360 | 2452.0 | SRA |
Sample: SRS23726902
BioProject: PRJNA1207914
BioSample: SAMN46158342
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926239 | 24225528 | 7260601582 | 2369.0 | SRA |
Sample: SRS23726903
BioProject: PRJNA1207914
BioSample: SAMN46158341
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926238 | 30661025 | 9187871009 | 3036.0 | SRA |
Sample: SRS23726904
BioProject: PRJNA1207914
BioSample: SAMN46158340
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926237 | 35948428 | 10776505821 | 3533.0 | SRA |
Sample: SRS23726905
BioProject: PRJNA1207914
BioSample: SAMN46158339
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926236 | 21060352 | 6285556556 | 2183.0 | SRA |
Sample: SRS23726906
BioProject: PRJNA1207914
BioSample: SAMN46158338
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926235 | 24023476 | 7176481439 | 2482.0 | SRA |
Sample: SRS23726907
BioProject: PRJNA1207914
BioSample: SAMN46158336
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926234 | 20367957 | 6066233550 | 2128.0 | SRA |
Sample: SRS23726908
BioProject: PRJNA1207914
BioSample: SAMN46158335
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926233 | 19622780 | 5830436035 | 1990.0 | SRA |
Sample: SRS23726909
BioProject: PRJNA1207914
BioSample: SAMN46158334
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926232 | 38073269 | 11388526984 | 3871.0 | SRA |
Sample: SRS23726910
BioProject: PRJNA1207914
BioSample: SAMN46158333
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926231 | 22996076 | 6901082259 | 2284.0 | SRA |
Sample: SRS23726911
BioProject: PRJNA1207914
BioSample: SAMN46158332
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926230 | 22586945 | 6767997457 | 2227.0 | SRA |
Sample: SRS23726912
BioProject: PRJNA1207914
BioSample: SAMN46158330
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926229 | 16522693 | 4901097635 | 1620.0 | SRA |
Sample: SRS23726913
BioProject: PRJNA1207914
BioSample: SAMN46158329
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926228 | 19977865 | 5943158001 | 2104.0 | SRA |
Sample: SRS23726914
BioProject: PRJNA1207914
BioSample: SAMN46158328
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926227 | 19988702 | 5960206981 | 2054.0 | SRA |
Sample: SRS23726915
BioProject: PRJNA1207914
BioSample: SAMN46158326
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926226 | 24635326 | 7287806605 | 2516.0 | SRA |
Sample: SRS23726916
BioProject: PRJNA1207914
BioSample: SAMN46158325
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926225 | 19466038 | 5791253946 | 1999.0 | SRA |
Sample: SRS23726917
BioProject: PRJNA1207914
BioSample: SAMN46158324
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926224 | 37122748 | 11083579766 | 3590.0 | SRA |
Sample: SRS23726918
BioProject: PRJNA1207914
BioSample: SAMN46158323
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926223 | 46871049 | 14033848791 | 4588.0 | SRA |
Sample: SRS23726919
BioProject: PRJNA1207914
BioSample: SAMN46158322
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926222 | 39267855 | 11730801769 | 3849.0 | SRA |
Sample: SRS23726920
BioProject: PRJNA1207914
BioSample: SAMN46158320
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926221 | 21965639 | 6446450939 | 2112.0 | SRA |
Sample: SRS23726921
BioProject: PRJNA1207914
BioSample: SAMN46158319
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926220 | 25639314 | 7667887742 | 2707.0 | SRA |
Sample: SRS23726922
BioProject: PRJNA1207914
BioSample: SAMN46158318
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926219 | 24986253 | 7364892909 | 2528.0 | SRA |
Sample: SRS23726923
BioProject: PRJNA1207914
BioSample: SAMN46158317
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926218 | 22120050 | 6599784388 | 2312.0 | SRA |
Sample: SRS23726924
BioProject: PRJNA1207914
BioSample: SAMN46158316
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926217 | 20523801 | 6135269598 | 2120.0 | SRA |
Sample: SRS23726925
BioProject: PRJNA1207914
BioSample: SAMN46158314
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926216 | 28347130 | 8423405431 | 2720.0 | SRA |
Sample: SRS23726926
BioProject: PRJNA1207914
BioSample: SAMN46158313
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926215 | 32744702 | 9778381080 | 3151.0 | SRA |
Sample: SRS23726927
BioProject: PRJNA1207914
BioSample: SAMN46158312
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926214 | 35533326 | 10571650520 | 3435.0 | SRA |
Sample: SRS23726928
BioProject: PRJNA1207914
BioSample: SAMN46158311
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926213 | 25521409 | 7575062961 | 2470.0 | SRA |
Sample: SRS23726929
BioProject: PRJNA1207914
BioSample: SAMN46158310
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926212 | 15843447 | 4732214266 | 1676.0 | SRA |
Sample: SRS23726930
BioProject: PRJNA1207914
BioSample: SAMN46158308
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926211 | 19565245 | 5857009170 | 2020.0 | SRA |
Sample: SRS23726931
BioProject: PRJNA1207914
BioSample: SAMN46158307
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926210 | 20823277 | 6240168952 | 2140.0 | SRA |
Sample: SRS23726932
BioProject: PRJNA1207914
BioSample: SAMN46158306
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926209 | 18296469 | 5480802597 | 1892.0 | SRA |
Sample: SRS23726933
BioProject: PRJNA1207914
BioSample: SAMN46158305
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926208 | 26324086 | 7835933503 | 2529.0 | SRA |
Sample: SRS23726934
BioProject: PRJNA1207914
BioSample: SAMN46158303
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926207 | 35844742 | 10679567891 | 3413.0 | SRA |
Sample: SRS23726935
BioProject: PRJNA1207914
BioSample: SAMN46158302
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926206 | 28165647 | 8367848575 | 2696.0 | SRA |
Sample: SRS23726936
BioProject: PRJNA1207914
BioSample: SAMN46158301
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926205 | 29266332 | 8738122153 | 2927.0 | SRA |
Sample: SRS23726937
BioProject: PRJNA1207914
BioSample: SAMN46158299
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926204 | 19090274 | 5701513971 | 1971.0 | SRA |
Sample: SRS23726938
BioProject: PRJNA1207914
BioSample: SAMN46158298
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926203 | 18521627 | 5521297481 | 1898.0 | SRA |
Sample: SRS23726939
BioProject: PRJNA1207914
BioSample: SAMN46158297
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926202 | 20529909 | 6151697898 | 2132.0 | SRA |
Sample: SRS23726940
BioProject: PRJNA1207914
BioSample: SAMN46158295
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926201 | 33367753 | 9790348685 | 3160.0 | SRA |
Sample: SRS23726941
BioProject: PRJNA1207914
BioSample: SAMN46158294
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926200 | 29571379 | 8836905343 | 2820.0 | SRA |
Sample: SRS23726942
BioProject: PRJNA1207914
BioSample: SAMN46158293
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926199 | 35888920 | 10735126788 | 3505.0 | SRA |
Sample: SRS23726943
BioProject: PRJNA1207914
BioSample: SAMN46158292
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926198 | 17879960 | 5331886931 | 1762.0 | SRA |
Sample: SRS23726944
BioProject: PRJNA1207914
BioSample: SAMN46158290
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926197 | 22296761 | 6672472529 | 2323.0 | SRA |
Sample: SRS23726945
BioProject: PRJNA1207914
BioSample: SAMN46158289
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926196 | 20903270 | 6186735971 | 2151.0 | SRA |
Sample: SRS23726946
BioProject: PRJNA1207914
BioSample: SAMN46158287
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926195 | 19968263 | 5972781391 | 2054.0 | SRA |
Sample: SRS23726947
BioProject: PRJNA1207914
BioSample: SAMN46158286
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926194 | 38390278 | 11485587897 | 3740.0 | SRA |
Sample: SRS23726948
BioProject: PRJNA1207914
BioSample: SAMN46158285
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926193 | 27310492 | 8167089922 | 2662.0 | SRA |
Sample: SRS23726949
BioProject: PRJNA1207914
BioSample: SAMN46158284
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Runs (1)
| Run | Spots | Bases | Size (MB) | Files | Link |
|---|---|---|---|---|---|
| SRR31926192 | 25504403 | 7594172160 | 2437.0 | SRA |
Linked Publications (1)
The YTHDF proteins modulate Alzheimer's disease-associated brain gene signatures.
Molecular neurodegeneration · 2026
Potentially Related Publications (1)
This accession was text-mined from the PMC full text of these publications. It may be referenced for comparison or reused from another study rather than generated for them.
The YTHDF proteins modulate Alzheimer's disease-associated brain gene signatures.
Molecular neurodegeneration · 2026
Data Files (66)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| — | SRR31926192_GSM8717703 | RNA-Seq | 2.4 GB | link | |||
| — | SRR31926193_GSM8717702 | RNA-Seq | 2.6 GB | link | |||
| — | SRR31926194_GSM8717701 | RNA-Seq | 3.7 GB | link | |||
| — | SRR31926195_GSM8717700 | RNA-Seq | 2.0 GB | link | |||
| — | SRR31926196_GSM8717699 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926197_GSM8717698 | RNA-Seq | 2.3 GB | link | |||
| — | SRR31926198_GSM8717697 | RNA-Seq | 1.7 GB | link | |||
| — | SRR31926199_GSM8717696 | RNA-Seq | 3.4 GB | link | |||
| — | SRR31926200_GSM8717695 | RNA-Seq | 2.8 GB | link | |||
| — | SRR31926201_GSM8717694 | RNA-Seq | 3.1 GB | link | |||
| — | SRR31926202_GSM8717693 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926203_GSM8717692 | RNA-Seq | 1.9 GB | link | |||
| — | SRR31926204_GSM8717691 | RNA-Seq | 1.9 GB | link | |||
| — | SRR31926205_GSM8717690 | RNA-Seq | 2.9 GB | link | |||
| — | SRR31926206_GSM8717689 | RNA-Seq | 2.6 GB | link | |||
| — | SRR31926207_GSM8717688 | RNA-Seq | 3.3 GB | link | |||
| — | SRR31926208_GSM8717687 | RNA-Seq | 2.5 GB | link | |||
| — | SRR31926209_GSM8717686 | RNA-Seq | 1.8 GB | link | |||
| — | SRR31926210_GSM8717685 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926211_GSM8717684 | RNA-Seq | 2.0 GB | link | |||
| — | SRR31926212_GSM8717683 | RNA-Seq | 1.6 GB | link | |||
| — | SRR31926213_GSM8717682 | RNA-Seq | 2.4 GB | link | |||
| — | SRR31926214_GSM8717681 | RNA-Seq | 3.4 GB | link | |||
| — | SRR31926215_GSM8717680 | RNA-Seq | 3.1 GB | link | |||
| — | SRR31926216_GSM8717679 | RNA-Seq | 2.7 GB | link | |||
| — | SRR31926217_GSM8717678 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926218_GSM8717677 | RNA-Seq | 2.3 GB | link | |||
| — | SRR31926219_GSM8717676 | RNA-Seq | 2.5 GB | link | |||
| — | SRR31926220_GSM8717675 | RNA-Seq | 2.6 GB | link | |||
| — | SRR31926221_GSM8717674 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926222_GSM8717673 | RNA-Seq | 3.8 GB | link | |||
| — | SRR31926223_GSM8717672 | RNA-Seq | 4.5 GB | link | |||
| — | SRR31926224_GSM8717671 | RNA-Seq | 3.5 GB | link | |||
| — | SRR31926225_GSM8717670 | RNA-Seq | 2.0 GB | link | |||
| — | SRR31926226_GSM8717669 | RNA-Seq | 2.5 GB | link | |||
| — | SRR31926227_GSM8717668 | RNA-Seq | 2.0 GB | link | |||
| — | SRR31926228_GSM8717667 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926229_GSM8717666 | RNA-Seq | 1.6 GB | link | |||
| — | SRR31926230_GSM8717665 | RNA-Seq | 2.2 GB | link | |||
| — | SRR31926231_GSM8717664 | RNA-Seq | 2.2 GB | link | |||
| — | SRR31926232_GSM8717663 | RNA-Seq | 3.8 GB | link | |||
| — | SRR31926233_GSM8717662 | RNA-Seq | 1.9 GB | link | |||
| — | SRR31926234_GSM8717661 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926235_GSM8717660 | RNA-Seq | 2.4 GB | link | |||
| — | SRR31926236_GSM8717659 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926237_GSM8717658 | RNA-Seq | 3.5 GB | link | |||
| — | SRR31926238_GSM8717657 | RNA-Seq | 3.0 GB | link | |||
| — | SRR31926239_GSM8717656 | RNA-Seq | 2.3 GB | link | |||
| — | SRR31926240_GSM8717655 | RNA-Seq | 2.4 GB | link | |||
| — | SRR31926241_GSM8717654 | RNA-Seq | 2.4 GB | link | |||
| — | SRR31926242_GSM8717653 | RNA-Seq | 2.2 GB | link | |||
| — | SRR31926243_GSM8717652 | RNA-Seq | 1.8 GB | link | |||
| — | SRR31926244_GSM8717651 | RNA-Seq | 1.3 GB | link | |||
| — | SRR31926245_GSM8717650 | RNA-Seq | 3.4 GB | link | |||
| — | SRR31926246_GSM8717649 | RNA-Seq | 2.7 GB | link | |||
| — | SRR31926247_GSM8717648 | RNA-Seq | 2.4 GB | link | |||
| — | SRR31926248_GSM8717647 | RNA-Seq | 2.7 GB | link | |||
| — | SRR31926249_GSM8717646 | RNA-Seq | 2.4 GB | link | |||
| — | SRR31926250_GSM8717645 | RNA-Seq | 3.5 GB | link | |||
| — | SRR31926251_GSM8717644 | RNA-Seq | 3.1 GB | link | |||
| — | SRR31926252_GSM8717643 | RNA-Seq | 2.5 GB | link | |||
| — | SRR31926253_GSM8717642 | RNA-Seq | 1.8 GB | link | |||
| — | SRR31926254_GSM8717641 | RNA-Seq | 1.9 GB | link | |||
| — | SRR31926255_GSM8717640 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926256_GSM8717639 | RNA-Seq | 2.1 GB | link | |||
| — | SRR31926257_GSM8717638 | RNA-Seq | 2.6 GB | link |