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Katherine L Rothamel

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Publications
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Publications

Comprehensive RNA-binding protein analyses and deep learning uncover genetic constraints and disease associations in protein-RNA interfaces.
Cell systems · 2026
Decoding protein-RNA interactions using CLIP-based methodologies.
Nature reviews. Genetics · 2024
Large-scale map of RNA-binding protein interactomes across the mRNA life cycle.
Molecular cell · 2024
Mudskipper detects combinatorial RNA binding protein interactions in multiplexed CLIP data.
Cell genomics · 2024
Protocol to process crosslinking and immunoprecipitation data into annotated binding sites.
STAR protocols · 2024
A super-enhancer-regulated RNA-binding protein cascade drives pancreatic cancer.
Nature communications · 2023