← All datasets

GSE107766

GSE GEO
View on GEO Export SRA CSV

Best practices for eCLIP experiments and analysis [uncertain quality]

Organism: Homo sapiens
Platform: GPL20301
Samples: 150
Experiment Types:
Other
Submitted: Dec 06 2017
Last Updated: Aug 24 2020
Status: Public on Jun 08 2018
Contact: Gene,,Yeo (UCSD)

Relations

SubSeries of: GSE107768 BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA421346 SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRP126276

Summary

Enhanced cross-linking immunoprecipitation (eCLIP) featuring a size-matched input control has been recently applied to profile the binding sites of more than one hundred RNA binding proteins (RBPs). However computational pipelines and quality control metrics needed to process CLIP data at scale have yet to be well defined. Here, we describe our ENCODE eCLIP processing pipeline (https://github.com/YeoLab/eclip), enabling users to go from raw reads to processed peaks that are enriched above paired input, reproducible across biological replicates, and can be directly compared against the public ENCODE eCLIP resource. In particular, we discuss processing steps designed to address common artifacts, including properly quantifying unique RNA fragments bound by both unique genomic- and repetitive element-mapped reads. Using manual quality annotation of 350 ENCODE eCLIP experiments, we develop metrics for quality assessment of eCLIP experiments prior to and after sequencing, including library yield, number of unique fragments in the library, total binding relative information, and biological reproducibility. In particular, we quantify the commonly believed linkage between depth of sequencing and peak discovery, and derive methods for estimating required sequencing depth based on pre-sequencing metrics. Finally we provide recommendations for the common question of integrating RBP binding information with RNA-seq to generate splicing maps representing the positional effect of binding on alternative splicing. These pipelines and QC metrics enable large-scale processing and analysis of eCLIP data, and will help to standardize rigorous analysis of RBP binding data.

Overall Design

eCLIP-seq in HepG2 and K562 Cells. Datasets in this subseries failed manual quality assessment for various reasons, but may still have useful, although unusual binding information.

Analysis (33 steps)

View Data Processing
Processing steps for GSE107766
  1. Library strategy: eCLIP-seq
  2. Takes output from raw files.
  3. Run to trim off both 5’ and 3’ adapters on both reads.
  4. Command: quality-cutoff 6 -m 18 -a NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC -g CTTCCGATCTACAAGTT -g CTTCCGATCTTGGTCCT -A AACTTGTAGATCGGA -A AGGACCAAGATCGGA -A ACTTGTAGATCGGAA -A GGACCAAGATCGGAA -A CTTGT AGATCGGAAG -A GACCAAGATCGGAAG -A TTGTAGATCGGAAGA -A ACCAAGATCGGAAGA -A TGTAGATCGGAAGAG -A CCAAGATCGGAAGAG -A GTAGATCGGAAGAGC -A CAAGATCGGAAGAGC -A TAGATCGGAAGAGCG -A AAGATCGGAAGAGCG -A AGATCGGAAGAGCGT -A GATCGGAAGAGCGTC -A ATCGGAAGAGCGTCG -A TCGGAAGAGCGTCGT -A CGGAAGAGCGTCGTG -A GGAAGAGCGTCGTGT -o /full/path/to/files/file_R1.C01.fastq.gz.adapterTrim.fastq.gz -p /full/path/to/files/file_R2.C01.fastq.gz.adapterTrim.fastq.gz /full/path/to/files/file_R1.C01.fastq.gz /full/path/to/files/file_R2.C01.fastq.gz > /full/path/to/files/file_R1.C01.fastq.gz.adapterTrim.metrics
  5. Takes output from cutadapt round 1.
  6. Run to trim off the 3’ adapters on read 2, to control for double ligation events.
  7. Command: cutadapt -f fastq --match-read-wildcards --times 1 -e 0.1 -O 5 --quality-cutoff 6 -m 18 -A AACTTGTAGATCGGA -A AGGACCAAGATCGGA -A ACTTGTAGATCGGAA -A GGACCAAGATCGGAA -A CTTGTAGATCGGAAG -A GACCAAGATCGGAAG -A TTGTAGATCGGAAGA -A ACCAAGATCGGAAGA -A TGTAGATCGGAAGAG -A CCAAGATCGGAAGAG -A GTAGATCGGAAGAGC -A CAAGATCGGAAGAGC -A TAGATCGGAAGAGCG -A AAGATCGGAAGAGCG -A AGATCGGAAGAGCGT -A GATCGGAAGAGCGTC -A ATCGGAAGAGCGTCG -A TCGGAAGAGCGTCGT -A CGGAAGAGCGTCGTG -A GGAAGAGCGTCGTGT -o /full/path/to/files/file_R1.C01.fastq.gz.adapterTrim.round2.fastq.gz -p /full/path/to/files/file_R2.C01.fastq.gz.adapterTrim.round2.fastq.gz /full/path/to/files/file_R1.C01.fastq.gz.adapterTrim.fastq.gz /full/path/to/files/file_R2.C01.fastq.gz.adapterTrim.fastq.gz > /full/path/to/files/file_R1.C01.fastq.gz.adapterTrim.round2.metrics
  8. Takes output from cutadapt round 2.
Showing first 8 steps.

Supplementary Files (1)

GSE107766_RAW.tar Download
GEO Samples (150)
GSM2878474 GSM2878475 GSM2878476 GSM2878477 GSM2878478 GSM2878479 GSM2878480 GSM2878481 GSM2878482 GSM2878483 GSM2878484 GSM2878485 GSM2878486 GSM2878487 GSM2878488 GSM2878489 GSM2878490 GSM2878491 GSM2878492 GSM2878493 GSM2878494 GSM2878495 GSM2878496 GSM2878497 GSM2878498 GSM2878499 GSM2878500 GSM2878501 GSM2878502 GSM2878503 GSM2878504 GSM2878505 GSM2878506 GSM2878507 GSM2878508 GSM2878509 GSM2878510 GSM2878511 GSM2878512 GSM2878513 GSM2878514 GSM2878515 GSM2878516 GSM2878517 GSM2878518 GSM2878519 GSM2878520 GSM2878521 GSM2878522 GSM2878523 GSM2878524 GSM2878525 GSM2878526 GSM2878527 GSM2878528 GSM2878529 GSM2878530 GSM2878531 GSM2878532 GSM2878533 GSM2878534 GSM2878535 GSM2878536 GSM2878537 GSM2878538 GSM2878539 GSM2878540 GSM2878541 GSM2878542 GSM2878543 GSM2878544 GSM2878545 GSM2878546 GSM2878547 GSM2878548 GSM2878549 GSM2878550 GSM2878551 GSM2878552 GSM2878553 GSM2878554 GSM2878555 GSM2878556 GSM2878557 GSM2878558 GSM2878559 GSM2878560 GSM2878561 GSM2878562 GSM2878563 GSM2878564 GSM2878565 GSM2878566 GSM2878567 GSM2878568 GSM2878569 GSM2878570 GSM2878571 GSM2878572 GSM2878573 GSM2878574 GSM2878575 GSM2878576 GSM2878577 GSM2878578 GSM3398052 GSM3398053 GSM3398054 GSM3398055 GSM3398056 GSM3398057 GSM3398058 GSM3398059 GSM3398060 GSM3398061 GSM3398062 GSM3398063 GSM3398064 GSM3398065 GSM3398066 GSM3398067 GSM3398068 GSM3398069 GSM3398070 GSM3398071 GSM3398072 GSM3398073 GSM3398074 GSM3398075 GSM3398076 GSM3398077 GSM3398078 GSM3398079 GSM3398080 GSM3398081 GSM3398082 GSM3398083 GSM3398084 GSM3398085 GSM3398086 GSM3398087 GSM3398088 GSM3398089 GSM3398090 GSM3398091 GSM3398092 GSM3398093 GSM3398094 GSM3398095 GSM3398096

Dataset Citations (2)

A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.
PMID 31363146 · 2019 · Scientific reports
Rainer W J Kaiser, Michael Ignarski, Eric L Van Nostrand, Christian K Frese, Manaswita Jain, Sadrija Cukoski, Heide Heinen, Melanie Schaechter, Lisa Seufert, Konstantin Bunte, Peter Frommolt, Patrick Keller, Mark Helm, Katrin Bohl, Martin Höhne, Bernhard Schermer, Thomas Benzing, Katja Höpker, Christoph Dieterich, Gene W Yeo, Roman-Ulrich Müller, Francesca Fabretti
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246 · 2020 · Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo

SRA Experiments (150) and Runs (150)

Total: 121050 MB
SRX3451607 SRP126276 OTHER PAIRED
GSM2878474: 266_01; Homo sapiens; OTHER
Sample: SRS2740467
BioProject: PRJNA421346
BioSample: SAMN08140414
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: FKBP4
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458659 7531739 753173900 282.9 266_01.R1.fastq.gz, 266_01.R2.fastq.gz, SRR6458659, SRR6458659.sralite SRA
SRX3451608 SRP126276 OTHER PAIRED
GSM2878475: 266_02; Homo sapiens; OTHER
Sample: SRS2740470
BioProject: PRJNA421346
BioSample: SAMN08140413
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: FKBP4
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458660 7765875 776587500 289.51 266_02.R1.fastq.gz, 266_02.R2.fastq.gz, SRR6458660, SRR6458660.sralite SRA
SRX3451609 SRP126276 OTHER PAIRED
GSM2878476: 264_01; Homo sapiens; OTHER
Sample: SRS2740468
BioProject: PRJNA421346
BioSample: SAMN08140412
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: PRPF6
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458661 5472566 547256600 203.3 264_01.R1.fastq.gz, 264_01.R2.fastq.gz, SRR6458661, SRR6458661.sralite SRA
SRX3451610 SRP126276 OTHER PAIRED
GSM2878477: 264_02; Homo sapiens; OTHER
Sample: SRS2740469
BioProject: PRJNA421346
BioSample: SAMN08140411
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: PRPF6
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458662 3455961 345596100 127.29 264_02.R1.fastq.gz, 264_02.R2.fastq.gz, SRR6458662, SRR6458662.sralite SRA
SRX3451611 SRP126276 OTHER PAIRED
GSM2878478: 299_01; Homo sapiens; OTHER
Sample: SRS2740471
BioProject: PRJNA421346
BioSample: SAMN08140464
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A01,B06
antibody: NONO
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458663 17677701 1903828700 844.64 299_01.R1.fastq.gz, 299_01.R2.fastq.gz, SRR6458663, SRR6458663.sralite SRA
SRX3451612 SRP126276 OTHER PAIRED
GSM2878479: 299_02; Homo sapiens; OTHER
Sample: SRS2740472
BioProject: PRJNA421346
BioSample: SAMN08140463
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: C01,D08fixed
antibody: NONO
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458664 25250797 2734279820 1221.92 299_02.R1.fastq.gz, 299_02.R2.fastq.gz, SRR6458664, SRR6458664.sralite SRA
SRX3451613 SRP126276 OTHER PAIRED
GSM2878480: 463_01; Homo sapiens; OTHER
Sample: SRS2740473
BioProject: PRJNA421346
BioSample: SAMN08140462
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: ETF1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458665 8512824 936410640 315.95 463_01.R1.fastq.gz, 463_01.R2.fastq.gz, SRR6458665, SRR6458665.sralite SRA
SRX3451614 SRP126276 OTHER PAIRED
GSM2878481: 463_02; Homo sapiens; OTHER
Sample: SRS2740474
BioProject: PRJNA421346
BioSample: SAMN08140461
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: ETF1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458666 7459427 820536970 277.25 463_02.R1.fastq.gz, 463_02.R2.fastq.gz, SRR6458666, SRR6458666.sralite SRA
SRX3451615 SRP126276 OTHER PAIRED
GSM2878482: 419_01; Homo sapiens; OTHER
Sample: SRS2740475
BioProject: PRJNA421346
BioSample: SAMN08140460
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: EIF2S2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458667 31511349 3466248390 1112.32 419_01.R1.fastq.gz, 419_01.R2.fastq.gz, SRR6458667, SRR6458667.sralite SRA
SRX3451616 SRP126276 OTHER PAIRED
GSM2878483: 419_02; Homo sapiens; OTHER
Sample: SRS2740476
BioProject: PRJNA421346
BioSample: SAMN08140459
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: EIF2S2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458668 30099815 3310979650 1057.07 419_02.R1.fastq.gz, 419_02.R2.fastq.gz, SRR6458668, SRR6458668.sralite SRA
SRX3451617 SRP126276 OTHER PAIRED
GSM2878484: 496_01; Homo sapiens; OTHER
Sample: SRS2740477
BioProject: PRJNA421346
BioSample: SAMN08140458
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: AATF
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458669 29283145 3221145950 1088.64 496_01.R1.fastq.gz, 496_01.R2.fastq.gz, SRR6458669, SRR6458669.sralite SRA
SRX3451618 SRP126276 OTHER PAIRED
GSM2878485: 496_02; Homo sapiens; OTHER
Sample: SRS2740478
BioProject: PRJNA421346
BioSample: SAMN08140457
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: AATF
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458670 31204815 3432529650 1157.55 496_02.R1.fastq.gz, 496_02.R2.fastq.gz, SRR6458670, SRR6458670.sralite SRA
SRX3451619 SRP126276 OTHER PAIRED
GSM2878486: 498_01; Homo sapiens; OTHER
Sample: SRS2740479
BioProject: PRJNA421346
BioSample: SAMN08140456
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: NELFE
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458671 24489371 2693830810 896.52 498_01.R1.fastq.gz, 498_01.R2.fastq.gz, SRR6458671, SRR6458671.sralite SRA
SRX3451620 SRP126276 OTHER PAIRED
GSM2878487: 498_02; Homo sapiens; OTHER
Sample: SRS2740480
BioProject: PRJNA421346
BioSample: SAMN08140455
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: NELFE
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458672 20063233 2206955630 735.37 498_02.R1.fastq.gz, 498_02.R2.fastq.gz, SRR6458672, SRR6458672.sralite SRA
SRX3451621 SRP126276 OTHER PAIRED
GSM2878488: 499_01; Homo sapiens; OTHER
Sample: SRS2740481
BioProject: PRJNA421346
BioSample: SAMN08140454
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: SRFBP1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458673 26529268 2918219480 982.65 499_01.R1.fastq.gz, 499_01.R2.fastq.gz, SRR6458673, SRR6458673.sralite SRA
SRX3451622 SRP126276 OTHER PAIRED
GSM2878489: 499_02; Homo sapiens; OTHER
Sample: SRS2740482
BioProject: PRJNA421346
BioSample: SAMN08140453
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: SRFBP1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458674 27660971 3042706810 1016.31 499_02.R1.fastq.gz, 499_02.R2.fastq.gz, SRR6458674, SRR6458674.sralite SRA
SRX3451623 SRP126276 OTHER PAIRED
GSM2878490: 512_01; Homo sapiens; OTHER
Sample: SRS2740486
BioProject: PRJNA421346
BioSample: SAMN08140452
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: NELFE
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458675 31171707 3428887770 1169.94 512_01.R1.fastq.gz, 512_01.R2.fastq.gz, SRR6458675, SRR6458675.sralite SRA
SRX3451624 SRP126276 OTHER PAIRED
GSM2878491: 512_02; Homo sapiens; OTHER
Sample: SRS2740483
BioProject: PRJNA421346
BioSample: SAMN08140451
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: NELFE
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458676 28944306 3183873660 1075.67 512_02.R1.fastq.gz, 512_02.R2.fastq.gz, SRR6458676, SRR6458676.sralite SRA
SRX3451625 SRP126276 OTHER PAIRED
GSM2878492: 459_01; Homo sapiens; OTHER
Sample: SRS2740485
BioProject: PRJNA421346
BioSample: SAMN08140450
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: DNAJC2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458677 20946195 2304081450 881.22 459_01.R1.fastq.gz, 459_01.R2.fastq.gz, SRR6458677, SRR6458677.sralite SRA
SRX3451626 SRP126276 OTHER PAIRED
GSM2878493: 459_02; Homo sapiens; OTHER
Sample: SRS2740484
BioProject: PRJNA421346
BioSample: SAMN08140449
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: DNAJC2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458678 15336472 1687011920 643.87 459_02.R1.fastq.gz, 459_02.R2.fastq.gz, SRR6458678, SRR6458678.sralite SRA
SRX3451627 SRP126276 OTHER PAIRED
GSM2878494: 471_01; Homo sapiens; OTHER
Sample: SRS2740487
BioProject: PRJNA421346
BioSample: SAMN08140448
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: RPS2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458679 6117665 672943150 250.38 471_01.R1.fastq.gz, 471_01.R2.fastq.gz, SRR6458679, SRR6458679.sralite SRA
SRX3451628 SRP126276 OTHER PAIRED
GSM2878495: 471_02; Homo sapiens; OTHER
Sample: SRS2740488
BioProject: PRJNA421346
BioSample: SAMN08140447
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: RPS2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458680 14151995 1556719450 580.55 471_02.R1.fastq.gz, 471_02.R2.fastq.gz, SRR6458680, SRR6458680.sralite SRA
SRX3451629 SRP126276 OTHER PAIRED
GSM2878496: 510_01; Homo sapiens; OTHER
Sample: SRS2740490
BioProject: PRJNA421346
BioSample: SAMN08140446
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: POLK
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458681 19013214 2091453540 760.87 510_01.R1.fastq.gz, 510_01.R2.fastq.gz, SRR6458681, SRR6458681.sralite SRA
SRX3451630 SRP126276 OTHER PAIRED
GSM2878497: 510_02; Homo sapiens; OTHER
Sample: SRS2740489
BioProject: PRJNA421346
BioSample: SAMN08140445
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: POLK
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458682 19282757 2121103270 765.39 510_02.R1.fastq.gz, 510_02.R2.fastq.gz, SRR6458682, SRR6458682.sralite SRA
SRX3451631 SRP126276 OTHER PAIRED
GSM2878498: 513_01; Homo sapiens; OTHER
Sample: SRS2740491
BioProject: PRJNA421346
BioSample: SAMN08140444
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: SRFBP1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458683 18792276 2067150360 744.29 513_01.R1.fastq.gz, 513_01.R2.fastq.gz, SRR6458683, SRR6458683.sralite SRA
SRX3451632 SRP126276 OTHER PAIRED
GSM2878499: 513_02; Homo sapiens; OTHER
Sample: SRS2740492
BioProject: PRJNA421346
BioSample: SAMN08140443
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: SRFBP1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458684 19412870 2135415700 767.75 513_02.R1.fastq.gz, 513_02.R2.fastq.gz, SRR6458684, SRR6458684.sralite SRA
SRX3451633 SRP126276 OTHER PAIRED
GSM2878500: 535_01; Homo sapiens; OTHER
Sample: SRS2740494
BioProject: PRJNA421346
BioSample: SAMN08140441
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: RRP9
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458685 20879180 2087918000 719.92 535_01.R1.fastq.gz, 535_01.R2.fastq.gz, SRR6458685, SRR6458685.sralite SRA
SRX3451634 SRP126276 OTHER PAIRED
GSM2878501: 535_02; Homo sapiens; OTHER
Sample: SRS2740493
BioProject: PRJNA421346
BioSample: SAMN08140440
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: RRP9
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458686 25108966 2510896600 866.17 535_02.R1.fastq.gz, 535_02.R2.fastq.gz, SRR6458686, SRR6458686.sralite SRA
SRX3451635 SRP126276 OTHER PAIRED
GSM2878502: 536_01; Homo sapiens; OTHER
Sample: SRS2740495
BioProject: PRJNA421346
BioSample: SAMN08140472
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: CCDC86
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458687 20183045 2018304500 693.72 536_01.R1.fastq.gz, 536_01.R2.fastq.gz, SRR6458687, SRR6458687.sralite SRA
SRX3451636 SRP126276 OTHER PAIRED
GSM2878503: 536_02; Homo sapiens; OTHER
Sample: SRS2740496
BioProject: PRJNA421346
BioSample: SAMN08140473
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: CCDC86
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458688 20127180 2012718000 687.32 536_02.R1.fastq.gz, 536_02.R2.fastq.gz, SRR6458688, SRR6458688.sralite SRA
SRX3451637 SRP126276 OTHER PAIRED
GSM2878504: 541_01; Homo sapiens; OTHER
Sample: SRS2740499
BioProject: PRJNA421346
BioSample: SAMN08140476
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: SRP68
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458689 15599343 1559934300 518.84 541_01.R1.fastq.gz, 541_01.R2.fastq.gz, SRR6458689, SRR6458689.sralite SRA
SRX3451638 SRP126276 OTHER PAIRED
GSM2878505: 541_02; Homo sapiens; OTHER
Sample: SRS2740497
BioProject: PRJNA421346
BioSample: SAMN08140475
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: SRP68
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458690 21002762 2100276200 698.82 541_02.R1.fastq.gz, 541_02.R2.fastq.gz, SRR6458690, SRR6458690.sralite SRA
SRX3451639 SRP126276 OTHER PAIRED
GSM2878506: 547_01; Homo sapiens; OTHER
Sample: SRS2740498
BioProject: PRJNA421346
BioSample: SAMN08140474
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: C01,D08fixed
antibody: RPLP0
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458691 30173452 3017345200 1020.18 547_01.R1.fastq.gz, 547_01.R2.fastq.gz, SRR6458691, SRR6458691.sralite SRA
SRX3451640 SRP126276 OTHER PAIRED
GSM2878507: 547_02; Homo sapiens; OTHER
Sample: SRS2740500
BioProject: PRJNA421346
BioSample: SAMN08140442
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A01,B06
antibody: RPLP0
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458692 30455070 3045507000 1037.82 547_02.R1.fastq.gz, 547_02.R2.fastq.gz, SRR6458692, SRR6458692.sralite SRA
SRX3451641 SRP126276 OTHER PAIRED
GSM2878508: 355_01_4000; Homo sapiens; OTHER
Sample: SRS2740502
BioProject: PRJNA421346
BioSample: SAMN08140469
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: DDX19B
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458693 21962166 2415838260 818.01 355_01_4000.R1.fastq.gz, 355_01_4000.R2.fastq.gz, SRR6458693, SRR6458… SRA
SRX3451642 SRP126276 OTHER PAIRED
GSM2878509: 355_02_4000; Homo sapiens; OTHER
Sample: SRS2740501
BioProject: PRJNA421346
BioSample: SAMN08140471
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: DDX19B
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458694 20502103 2255231330 760.57 355_02_4000.R1.fastq.gz, 355_02_4000.R2.fastq.gz, SRR6458694, SRR6458… SRA
SRX3451643 SRP126276 OTHER PAIRED
GSM2878510: 534_01; Homo sapiens; OTHER
Sample: SRS2740504
BioProject: PRJNA421346
BioSample: SAMN08140470
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: PKM
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458695 20571175 2262829250 806.64 534_01.R1.fastq.gz, 534_01.R2.fastq.gz, SRR6458695, SRR6458695.sralite SRA
SRX3451644 SRP126276 OTHER PAIRED
GSM2878511: 534_02; Homo sapiens; OTHER
Sample: SRS2740503
BioProject: PRJNA421346
BioSample: SAMN08140468
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: PKM
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458696 12772250 1404947500 499.97 534_02.R1.fastq.gz, 534_02.R2.fastq.gz, SRR6458696, SRR6458696.sralite SRA
SRX3451645 SRP126276 OTHER PAIRED
GSM2878512: 598_01; Homo sapiens; OTHER
Sample: SRS2740506
BioProject: PRJNA421346
BioSample: SAMN08140467
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: EIF2S1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458697 13595491 1495504010 513.18 598_01.R1.fastq.gz, 598_01.R2.fastq.gz, SRR6458697, SRR6458697.sralite SRA
SRX3451646 SRP126276 OTHER PAIRED
GSM2878513: 598_02; Homo sapiens; OTHER
Sample: SRS2740505
BioProject: PRJNA421346
BioSample: SAMN08140466
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: EIF2S1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458698 19450737 2139581070 737.35 598_02.R1.fastq.gz, 598_02.R2.fastq.gz, SRR6458698, SRR6458698.sralite SRA
SRX3451647 SRP126276 OTHER PAIRED
GSM2878514: 520_01; Homo sapiens; OTHER
Sample: SRS2740508
BioProject: PRJNA421346
BioSample: SAMN08140506
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: RTF1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458699 16078028 1768583080 603.57 520_01.R1.fastq.gz, 520_01.R2.fastq.gz, SRR6458699, SRR6458699.sralite SRA
SRX3451648 SRP126276 OTHER PAIRED
GSM2878515: 520_02; Homo sapiens; OTHER
Sample: SRS2740507
BioProject: PRJNA421346
BioSample: SAMN08140505
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: RTF1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458700 18797171 2067688810 706.1 520_02.R1.fastq.gz, 520_02.R2.fastq.gz, SRR6458700, SRR6458700.sralite SRA
SRX3451649 SRP126276 OTHER PAIRED
GSM2878516: 523_01; Homo sapiens; OTHER
Sample: SRS2740509
BioProject: PRJNA421346
BioSample: SAMN08140504
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: EIF3H
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458701 22189805 2440878550 816.17 523_01.R1.fastq.gz, 523_01.R2.fastq.gz, SRR6458701, SRR6458701.sralite SRA
SRX3451650 SRP126276 OTHER PAIRED
GSM2878517: 523_02; Homo sapiens; OTHER
Sample: SRS2740510
BioProject: PRJNA421346
BioSample: SAMN08140503
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: EIF3H
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458702 24990837 2748992070 910.57 523_02.R1.fastq.gz, 523_02.R2.fastq.gz, SRR6458702, SRR6458702.sralite SRA
SRX3451651 SRP126276 OTHER PAIRED
GSM2878518: 611_01; Homo sapiens; OTHER
Sample: SRS2740511
BioProject: PRJNA421346
BioSample: SAMN08140502
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: RPLP0
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458703 19846887 2183157570 745.29 611_01.R1.fastq.gz, 611_01.R2.fastq.gz, SRR6458703, SRR6458703.sralite SRA
SRX3451652 SRP126276 OTHER PAIRED
GSM2878519: 611_02; Homo sapiens; OTHER
Sample: SRS2740512
BioProject: PRJNA421346
BioSample: SAMN08140501
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: RPLP0
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458704 7352867 808815370 277.43 611_02.R1.fastq.gz, 611_02.R2.fastq.gz, SRR6458704, SRR6458704.sralite SRA
SRX3451653 SRP126276 OTHER PAIRED
GSM2878520: 616_01; Homo sapiens; OTHER
Sample: SRS2740514
BioProject: PRJNA421346
BioSample: SAMN08140500
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: EXOSC9
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458705 20140640 2215470400 757.21 616_01.R1.fastq.gz, 616_01.R2.fastq.gz, SRR6458705, SRR6458705.sralite SRA
SRX3451654 SRP126276 OTHER PAIRED
GSM2878521: 616_02; Homo sapiens; OTHER
Sample: SRS2740513
BioProject: PRJNA421346
BioSample: SAMN08140499
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: EXOSC9
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458706 21799129 2397904190 815.14 616_02.R1.fastq.gz, 616_02.R2.fastq.gz, SRR6458706, SRR6458706.sralite SRA
SRX3451655 SRP126276 OTHER PAIRED
GSM2878522: 451_01_4000; Homo sapiens; OTHER
Sample: SRS2740515
BioProject: PRJNA421346
BioSample: SAMN08140498
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: ILF2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458707 24789960 2776475520 880.49 451_01_4000.R1.fastq.gz, 451_01_4000.R2.fastq.gz, SRR6458707, SRR6458… SRA
SRX3451656 SRP126276 OTHER PAIRED
GSM2878523: 451_02_4000; Homo sapiens; OTHER
Sample: SRS2740516
BioProject: PRJNA421346
BioSample: SAMN08140497
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: ILF2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458708 45315035 5075283920 1605.99 451_02_4000.R1.fastq.gz, 451_02_4000.R2.fastq.gz, SRR6458708, SRR6458… SRA
SRX3451657 SRP126276 OTHER PAIRED
GSM2878524: 485_01_4000; Homo sapiens; OTHER
Sample: SRS2740517
BioProject: PRJNA421346
BioSample: SAMN08140496
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: C01,D08fixed
antibody: EIF2S2
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458709 97019905 10799649964 3480.21 485_01_4000.R1.fastq.gz, 485_01_4000.R2.fastq.gz, SRR6458709, SRR6458… SRA
SRX3451658 SRP126276 OTHER PAIRED
GSM2878525: 485_02_4000; Homo sapiens; OTHER
Sample: SRS2740518
BioProject: PRJNA421346
BioSample: SAMN08140495
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A01,B06
antibody: EIF2S2
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458710 73636156 8177998566 2640.88 485_02_4000.R1.fastq.gz, 485_02_4000.R2.fastq.gz, SRR6458710, SRR6458… SRA
SRX3451659 SRP126276 OTHER PAIRED
GSM2878526: 555_01; Homo sapiens; OTHER
Sample: SRS2740520
BioProject: PRJNA421346
BioSample: SAMN08140494
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: RRP9
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458711 15029055 1683254160 534.36 555_01.R1.fastq.gz, 555_01.R2.fastq.gz, SRR6458711, SRR6458711.sralite SRA
SRX3451660 SRP126276 OTHER PAIRED
GSM2878527: 555_02; Homo sapiens; OTHER
Sample: SRS2740519
BioProject: PRJNA421346
BioSample: SAMN08140493
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: RRP9
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458712 27881166 3122690592 977.75 555_02.R1.fastq.gz, 555_02.R2.fastq.gz, SRR6458712, SRR6458712.sralite SRA
SRX3451661 SRP126276 OTHER PAIRED
GSM2878528: 609_01; Homo sapiens; OTHER
Sample: SRS2740521
BioProject: PRJNA421346
BioSample: SAMN08140492
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: SRP68
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458713 35096862 3930848544 1245.01 609_01.R1.fastq.gz, 609_01.R2.fastq.gz, SRR6458713, SRR6458713.sralite SRA
SRX3451662 SRP126276 OTHER PAIRED
GSM2878529: 609_02; Homo sapiens; OTHER
Sample: SRS2740522
BioProject: PRJNA421346
BioSample: SAMN08140491
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: SRP68
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458714 27189654 3045241248 946.37 609_02.R1.fastq.gz, 609_02.R2.fastq.gz, SRR6458714, SRR6458714.sralite SRA
SRX3451663 SRP126276 OTHER PAIRED
GSM2878530: 674_01; Homo sapiens; OTHER
Sample: SRS2740524
BioProject: PRJNA421346
BioSample: SAMN08140490
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: NAA15
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458715 14457275 1590300250 545.24 674_01.R1.fastq.gz, 674_01.R2.fastq.gz, SRR6458715, SRR6458715.sralite SRA
SRX3451664 SRP126276 OTHER PAIRED
GSM2878531: 674_02; Homo sapiens; OTHER
Sample: SRS2740523
BioProject: PRJNA421346
BioSample: SAMN08140489
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: NAA15
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458716 15335986 1686958460 574.02 674_02.R1.fastq.gz, 674_02.R2.fastq.gz, SRR6458716, SRR6458716.sralite SRA
SRX3451665 SRP126276 OTHER PAIRED
GSM2878532: 721_01; Homo sapiens; OTHER
Sample: SRS2740526
BioProject: PRJNA421346
BioSample: SAMN08140488
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A01,B06
antibody: ETF1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458717 28864962 3175145820 1115.55 721_01.R1.fastq.gz, 721_01.R2.fastq.gz, SRR6458717, SRR6458717.sralite SRA
SRX3451666 SRP126276 OTHER PAIRED
GSM2878533: 721_02; Homo sapiens; OTHER
Sample: SRS2740525
BioProject: PRJNA421346
BioSample: SAMN08140487
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: C01,D08fixed
antibody: ETF1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458718 19125221 2103774310 735.47 721_02.R1.fastq.gz, 721_02.R2.fastq.gz, SRR6458718, SRR6458718.sralite SRA
SRX3451667 SRP126276 OTHER PAIRED
GSM2878534: 724_01; Homo sapiens; OTHER
Sample: SRS2740528
BioProject: PRJNA421346
BioSample: SAMN08140486
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A01,B06
antibody: NCBP1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458719 19473994 2142139340 770.68 724_01.R1.fastq.gz, 724_01.R2.fastq.gz, SRR6458719, SRR6458719.sralite SRA
SRX3451668 SRP126276 OTHER PAIRED
GSM2878535: 724_02; Homo sapiens; OTHER
Sample: SRS2740527
BioProject: PRJNA421346
BioSample: SAMN08140485
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: C01,D08fixed
antibody: NCBP1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458720 18154822 1997030420 708.92 724_02.R1.fastq.gz, 724_02.R2.fastq.gz, SRR6458720, SRR6458720.sralite SRA
SRX3451669 SRP126276 OTHER PAIRED
GSM2878536: 662_01; Homo sapiens; OTHER
Sample: SRS2740529
BioProject: PRJNA421346
BioSample: SAMN08140484
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: UTP3
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458721 31320800 3445288000 1159.44 662_01.R1.fastq.gz, 662_01.R2.fastq.gz, SRR6458721, SRR6458721.sralite SRA
SRX3451670 SRP126276 OTHER PAIRED
GSM2878537: 662_02; Homo sapiens; OTHER
Sample: SRS2740531
BioProject: PRJNA421346
BioSample: SAMN08140483
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: UTP3
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458722 23904265 2629469150 882.53 662_02.R1.fastq.gz, 662_02.R2.fastq.gz, SRR6458722, SRR6458722.sralite SRA
SRX3451671 SRP126276 OTHER PAIRED
GSM2878538: 706_01; Homo sapiens; OTHER
Sample: SRS2740530
BioProject: PRJNA421346
BioSample: SAMN08140482
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: SRSF4
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458723 27402768 3014304480 1093.29 706_01.R1.fastq.gz, 706_01.R2.fastq.gz, SRR6458723, SRR6458723.sralite SRA
SRX3451672 SRP126276 OTHER PAIRED
GSM2878539: 706_02; Homo sapiens; OTHER
Sample: SRS2740533
BioProject: PRJNA421346
BioSample: SAMN08140481
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: SRSF4
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458724 48092859 5290214490 1923.07 706_02.R1.fastq.gz, 706_02.R2.fastq.gz, SRR6458724, SRR6458724.sralite SRA
SRX3451673 SRP126276 OTHER PAIRED
GSM2878540: 739_01; Homo sapiens; OTHER
Sample: SRS2740532
BioProject: PRJNA421346
BioSample: SAMN08140480
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: CENPI
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458725 22177141 2439485510 911.69 739_01.R1.fastq.gz, 739_01.R2.fastq.gz, SRR6458725, SRR6458725.sralite SRA
SRX3451674 SRP126276 OTHER PAIRED
GSM2878541: 739_02; Homo sapiens; OTHER
Sample: SRS2740534
BioProject: PRJNA421346
BioSample: SAMN08140479
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: CENPI
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458726 21047525 2315227750 870.88 739_02.R1.fastq.gz, 739_02.R2.fastq.gz, SRR6458726, SRR6458726.sralite SRA
SRX3451675 SRP126276 OTHER PAIRED
GSM2878542: 669_01; Homo sapiens; OTHER
Sample: SRS2740536
BioProject: PRJNA421346
BioSample: SAMN08140478
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: AKAP8
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458727 48450477 4845047700 1708.22 669_01.R1.fastq.gz, 669_01.R2.fastq.gz, SRR6458727, SRR6458727.sralite SRA
SRX3451676 SRP126276 OTHER PAIRED
GSM2878543: 669_02; Homo sapiens; OTHER
Sample: SRS2740535
BioProject: PRJNA421346
BioSample: SAMN08140477
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: AKAP8
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458728 5491581 549158100 201.34 669_02.R1.fastq.gz, 669_02.R2.fastq.gz, SRR6458728, SRR6458728.sralite SRA
SRX3451677 SRP126276 OTHER PAIRED
GSM2878544: 264_INPUT; Homo sapiens; OTHER
Sample: SRS2740538
BioProject: PRJNA421346
BioSample: SAMN08140434
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: PRPF6
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458729 15392242 769612100 287.12 264_INPUT_GAGATTCC-AGGCGAAG_L001_R1.unassigned.barcoded.fastq.gz, 264… SRA
SRX3451678 SRP126276 OTHER PAIRED
GSM2878545: 266_INPUT; Homo sapiens; OTHER
Sample: SRS2740537
BioProject: PRJNA421346
BioSample: SAMN08140433
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: FKBP4
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458730 33856948 1692847400 645.99 266_INPUT_ATTCAGAA-GGCTCTGA_L006_R1.unassigned.barcoded.fastq.gz, 266… SRA
SRX3451679 SRP126276 OTHER PAIRED
GSM2878546: 299_INPUT; Homo sapiens; OTHER
Sample: SRS2740540
BioProject: PRJNA421346
BioSample: SAMN08140432
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: NONO
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458731 14392540 719627000 301.07 299_INPUT_ATTACTCG-AGG_L003_R1.unassigned.barcoded.fastq.gz, 299_INPU… SRA
SRX3451680 SRP126276 OTHER PAIRED
GSM2878547: 355x4000_INPUT; Homo sapiens; OTHER
Sample: SRS2740539
BioProject: PRJNA421346
BioSample: SAMN08140431
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: DDX19B
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458732 6877904 343895200 136.33 355_INPUT_ATTCAGAA-AGGCGAAG_L001_R1.unassigned.barcoded.fastq.gz, 355… SRA
SRX3451681 SRP126276 OTHER PAIRED
GSM2878548: 419_INPUT; Homo sapiens; OTHER
Sample: SRS2740541
BioProject: PRJNA421346
BioSample: SAMN08140430
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: EIF2S2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458733 51897230 2854347650 932.54 419_INPUT_S14_L002_R1_001.unassigned.barcoded.fastq.gz, 419_INPUT_S14… SRA
SRX3451682 SRP126276 OTHER PAIRED
GSM2878549: 451x4000_INPUT; Homo sapiens; OTHER
Sample: SRS2740542
BioProject: PRJNA421346
BioSample: SAMN08140429
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: ILF2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458734 17787290 996088240 321.52 451_INPUT_4000_S82_L006_R1_001.unassigned.barcoded.fastq.gz, 451_INPU… SRA
SRX3451683 SRP126276 OTHER PAIRED
GSM2878550: 459_INPUT; Homo sapiens; OTHER
Sample: SRS2740543
BioProject: PRJNA421346
BioSample: SAMN08140428
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: DNAJC2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458735 46943152 2581873360 984.66 459_INPUT_S30_L003_R1_001.unassigned.barcoded.fastq.gz, 459_INPUT_S30… SRA
SRX3451684 SRP126276 OTHER PAIRED
GSM2878551: 463_INPUT; Homo sapiens; OTHER
Sample: SRS2740544
BioProject: PRJNA421346
BioSample: SAMN08140427
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: ETF1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458736 19767688 1087222840 372.48 463_INPUT_GAGATTCC-CCTATCCT_L003_R1.unassigned.barcoded.fastq.gz, 463… SRA
SRX3451685 SRP126276 OTHER PAIRED
GSM2878552: 471_INPUT; Homo sapiens; OTHER
Sample: SRS2740545
BioProject: PRJNA421346
BioSample: SAMN08140426
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: RPS2
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458737 22648452 1245664860 482.41 471_INPUT_S28_L003_R1_001.unassigned.barcoded.fastq.gz, 471_INPUT_S28… SRA
SRX3451686 SRP126276 OTHER PAIRED
GSM2878553: 485x4000_INPUT; Homo sapiens; OTHER
Sample: SRS2740546
BioProject: PRJNA421346
BioSample: SAMN08140425
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: EIF2S2
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458738 88769386 4882316230 1648.2 485_INPUT_S42_L005_R1_001.unassigned.barcoded.fastq.gz, 485_INPUT_S42… SRA
SRX3451687 SRP126276 OTHER PAIRED
GSM2878554: 496_INPUT; Homo sapiens; OTHER
Sample: SRS2740548
BioProject: PRJNA421346
BioSample: SAMN08140424
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: AATF
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458739 56618720 3114029600 1058.35 496_INPUT_S69_L008_R1_001.unassigned.barcoded.fastq.gz, 496_INPUT_S69… SRA
SRX3451688 SRP126276 OTHER PAIRED
GSM2878555: 498_INPUT; Homo sapiens; OTHER
Sample: SRS2740547
BioProject: PRJNA421346
BioSample: SAMN08140423
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: NELFE
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458740 51899824 2854490320 972.8 498_INPUT_S46_L005_R1_001.unassigned.barcoded.fastq.gz, 498_INPUT_S46… SRA
SRX3451689 SRP126276 OTHER PAIRED
GSM2878556: 499_INPUT; Homo sapiens; OTHER
Sample: SRS2740549
BioProject: PRJNA421346
BioSample: SAMN08140422
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: SRFBP1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458741 45760622 2516834210 850.14 499_INPUT_S48_L005_R1_001.unassigned.barcoded.fastq.gz, 499_INPUT_S48… SRA
SRX3451690 SRP126276 OTHER PAIRED
GSM2878557: 510_INPUT; Homo sapiens; OTHER
Sample: SRS2740550
BioProject: PRJNA421346
BioSample: SAMN08140421
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: POLK
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458742 54272126 2984966930 1089.05 510_INPUT_S4_L001_R1_001.unassigned.barcoded.fastq.gz, 510_INPUT_S4_L… SRA
SRX3451691 SRP126276 OTHER PAIRED
GSM2878558: 512_INPUT; Homo sapiens; OTHER
Sample: SRS2740551
BioProject: PRJNA421346
BioSample: SAMN08140420
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: NELFE
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458743 58290156 3205958580 1124.88 512_INPUT_S67_L008_R1_001.unassigned.barcoded.fastq.gz, 512_INPUT_S67… SRA
SRX3451692 SRP126276 OTHER PAIRED
GSM2878559: 513_INPUT; Homo sapiens; OTHER
Sample: SRS2740552
BioProject: PRJNA421346
BioSample: SAMN08140419
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: SRFBP1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458744 49848826 2741685430 998.94 513_INPUT_S45_L004_R1_001.unassigned.barcoded.fastq.gz, 513_INPUT_S45… SRA
SRX3451693 SRP126276 OTHER PAIRED
GSM2878560: 520_INPUT; Homo sapiens; OTHER
Sample: SRS2740554
BioProject: PRJNA421346
BioSample: SAMN08140418
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: RTF1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458745 40868530 2247769150 747.76 520_INPUT_S24_L003_R1_001.unassigned.barcoded.fastq.gz, 520_INPUT_S24… SRA
SRX3451694 SRP126276 OTHER PAIRED
GSM2878561: 523_INPUT; Homo sapiens; OTHER
Sample: SRS2740553
BioProject: PRJNA421346
BioSample: SAMN08140417
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: EIF3H
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458746 53799424 2958968320 996.82 523_INPUT_S6_L001_R1_001.unassigned.barcoded.fastq.gz, 523_INPUT_S6_L… SRA
SRX3451695 SRP126276 OTHER PAIRED
GSM2878562: 534_INPUT; Homo sapiens; OTHER
Sample: SRS2740555
BioProject: PRJNA421346
BioSample: SAMN08140515
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: PKM
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458747 32684780 1797662900 644.58 534_INPUT_S2_L001_R1_001.unassigned.barcoded.fastq.gz, 534_INPUT_S2_L… SRA
SRX3451696 SRP126276 OTHER PAIRED
GSM2878563: 535_INPUT; Homo sapiens; OTHER
Sample: SRS2740556
BioProject: PRJNA421346
BioSample: SAMN08140514
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: RRP9
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458748 40125300 2006265000 695.35 535_INPUT_S57_L006_R1_001.unassigned.barcoded.fastq.gz, 535_INPUT_S57… SRA
SRX3451697 SRP126276 OTHER PAIRED
GSM2878564: 536_INPUT; Homo sapiens; OTHER
Sample: SRS2740557
BioProject: PRJNA421346
BioSample: SAMN08140513
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: CCDC86
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458749 50323030 2516151500 865.96 536_INPUT_S23_L003_R1_001.unassigned.barcoded.fastq.gz, 536_INPUT_S23… SRA
SRX3451698 SRP126276 OTHER PAIRED
GSM2878565: 541_INPUT; Homo sapiens; OTHER
Sample: SRS2740558
BioProject: PRJNA421346
BioSample: SAMN08140512
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: SRP68
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458750 35853162 1792658100 606.98 541_INPUT_S61_L007_R1_001.unassigned.barcoded.fastq.gz, 541_INPUT_S61… SRA
SRX3451699 SRP126276 OTHER PAIRED
GSM2878566: 547_INPUT; Homo sapiens; OTHER
Sample: SRS2740559
BioProject: PRJNA421346
BioSample: SAMN08140511
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: RPLP0
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458751 65301654 3265082700 1098.31 547_INPUT_S5_L001_R1_001.unassigned.barcoded.fastq.gz, 547_INPUT_S5_L… SRA
SRX3451700 SRP126276 OTHER PAIRED
GSM2878567: 555_INPUT; Homo sapiens; OTHER
Sample: SRS2740560
BioProject: PRJNA421346
BioSample: SAMN08140416
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: RRP9
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458752 74148482 4152314992 1284.52 555_INPUT_S5_L001_R1_001.unassigned.barcoded.fastq.gz, 555_INPUT_S5_L… SRA
SRX3451701 SRP126276 OTHER PAIRED
GSM2878568: 598_INPUT; Homo sapiens; OTHER
Sample: SRS2740561
BioProject: PRJNA421346
BioSample: SAMN08140517
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: EIF2S1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458753 49189328 2705413040 932.45 598_INPUT_S18_L002_R1_001.unassigned.barcoded.fastq.gz, 598_INPUT_S18… SRA
SRX3451702 SRP126276 OTHER PAIRED
GSM2878569: 609_INPUT; Homo sapiens; OTHER
Sample: SRS2740564
BioProject: PRJNA421346
BioSample: SAMN08140516
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: SRP68
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458754 73669552 4125494912 1276.59 609_INPUT_S39_L004_R1_001.unassigned.barcoded.fastq.gz, 609_INPUT_S39… SRA
SRX3451703 SRP126276 OTHER PAIRED
GSM2878570: 611_INPUT; Homo sapiens; OTHER
Sample: SRS2740562
BioProject: PRJNA421346
BioSample: SAMN08140510
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: RPLP0
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458755 36129682 1987132510 676.54 611_INPUT_S30_L003_R1_001.unassigned.barcoded.fastq.gz, 611_INPUT_S30… SRA
SRX3451704 SRP126276 OTHER PAIRED
GSM2878571: 616_INPUT; Homo sapiens; OTHER
Sample: SRS2740563
BioProject: PRJNA421346
BioSample: SAMN08140509
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: EXOSC9
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458756 44985758 2474216690 837.76 616_INPUT_S6_L004_R1_001.unassigned.barcoded.fastq.gz, 616_INPUT_S6_L… SRA
SRX3451705 SRP126276 OTHER PAIRED
GSM2878572: 662_INPUT; Homo sapiens; OTHER
Sample: SRS2740565
BioProject: PRJNA421346
BioSample: SAMN08140508
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: UTP3
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458757 37293970 2051168350 679.46 662_INPUT_S7_L006_R1_001.unassigned.barcoded.fastq.gz, 662_INPUT_S7_L… SRA
SRX3451706 SRP126276 OTHER PAIRED
GSM2878573: 669_INPUT; Homo sapiens; OTHER
Sample: SRS2740566
BioProject: PRJNA421346
BioSample: SAMN08140507
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: AKAP8
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458758 44179058 2208952900 788.45 669_INPUT_S12_L002_R1_001.unassigned.barcoded.fastq.gz, 669_INPUT_S12… SRA
SRX3451707 SRP126276 OTHER PAIRED
GSM2878574: 674_INPUT; Homo sapiens; OTHER
Sample: SRS2740567
BioProject: PRJNA421346
BioSample: SAMN08140439
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: NAA15
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458759 39806062 2189333410 806.44 674_INPUT_S78_L004_R1_001.unassigned.barcoded.fastq.gz, 674_INPUT_S78… SRA
SRX3451708 SRP126276 OTHER PAIRED
GSM2878575: 706_INPUT; Homo sapiens; OTHER
Sample: SRS2740568
BioProject: PRJNA421346
BioSample: SAMN08140438
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: SRSF4
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458760 32508512 1787968160 647.57 706_INPUT_S49_L005_R1_001.unassigned.barcoded.fastq.gz, 706_INPUT_S49… SRA
SRX3451709 SRP126276 OTHER PAIRED
GSM2878576: 721_INPUT; Homo sapiens; OTHER
Sample: SRS2740569
BioProject: PRJNA421346
BioSample: SAMN08140437
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: ETF1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458761 38135652 2097460860 732.94 721_INPUT_S77_L007_R1_001.unassigned.barcoded.fastq.gz, 721_INPUT_S77… SRA
SRX3451710 SRP126276 OTHER PAIRED
GSM2878577: 724_INPUT; Homo sapiens; OTHER
Sample: SRS2740571
BioProject: PRJNA421346
BioSample: SAMN08140436
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: NCBP1
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458762 32781658 1802991190 647.46 724_INPUT_S83_L008_R1_001.unassigned.barcoded.fastq.gz, 724_INPUT_S83… SRA
SRX3451711 SRP126276 OTHER PAIRED
GSM2878578: 739_INPUT; Homo sapiens; OTHER
Sample: SRS2740570
BioProject: PRJNA421346
BioSample: SAMN08140435
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: CENPI
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR6458763 34785972 1913228460 712.89 739_INPUT_S112_L008_R1_001.unassigned.barcoded.fastq.gz, 739_INPUT_S1… SRA
SRX4727426 SRP126276 OTHER PAIRED
GSM3398052: 332_01; Homo sapiens; OTHER
Sample: SRS3810918
BioProject: PRJNA421346
BioSample: SAMN10102683
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: RBM27
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889842 7232846 723284600 385.17 332_01.R1.fastq.gz, 332_01.R2.fastq.gz, SRR7889842, SRR7889842.sralite SRA
SRX4727427 SRP126276 OTHER PAIRED
GSM3398053: 332_02; Homo sapiens; OTHER
Sample: SRS3810919
BioProject: PRJNA421346
BioSample: SAMN10102682
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: RBM27
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889843 6661496 666149600 352.52 332_02.R1.fastq.gz, 332_02.R2.fastq.gz, SRR7889843, SRR7889843.sralite SRA
SRX4727428 SRP126276 OTHER PAIRED
GSM3398054: 366_01; Homo sapiens; OTHER
Sample: SRS3810920
BioProject: PRJNA421346
BioSample: SAMN10102680
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: TNRC6A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889844 13893755 1389375500 487.51 366_01.R1.fastq.gz, 366_01.R2.fastq.gz, SRR7889844, SRR7889844.sralite SRA
SRX4727429 SRP126276 OTHER PAIRED
GSM3398055: 366_02; Homo sapiens; OTHER
Sample: SRS3810921
BioProject: PRJNA421346
BioSample: SAMN10102679
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: TNRC6A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889845 13474208 1347420800 479.57 366_02.R1.fastq.gz, 366_02.R2.fastq.gz, SRR7889845, SRR7889845.sralite SRA
SRX4727430 SRP126276 OTHER PAIRED
GSM3398056: 415_01; Homo sapiens; OTHER
Sample: SRS3810922
BioProject: PRJNA421346
BioSample: SAMN10102677
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: TNRC6A
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889846 12748721 1274872100 475.33 415_01.R1.fastq.gz, 415_01.R2.fastq.gz, SRR7889846, SRR7889846.sralite SRA
SRX4727431 SRP126276 OTHER PAIRED
GSM3398057: 415_02; Homo sapiens; OTHER
Sample: SRS3810923
BioProject: PRJNA421346
BioSample: SAMN10102676
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: TNRC6A
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889847 9666410 966641000 354.43 415_02.R1.fastq.gz, 415_02.R2.fastq.gz, SRR7889847, SRR7889847.sralite SRA
SRX4727432 SRP126276 OTHER PAIRED
GSM3398058: 417_01; Homo sapiens; OTHER
Sample: SRS3810924
BioProject: PRJNA421346
BioSample: SAMN10102674
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: POLR2G
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889848 25414217 2795563870 913.38 417_01.R1.fastq.gz, 417_01.R2.fastq.gz, SRR7889848, SRR7889848.sralite SRA
SRX4727433 SRP126276 OTHER PAIRED
GSM3398059: 417_02; Homo sapiens; OTHER
Sample: SRS3810925
BioProject: PRJNA421346
BioSample: SAMN10102673
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: POLR2G
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889849 29055350 3196088500 1037.88 417_02.R1.fastq.gz, 417_02.R2.fastq.gz, SRR7889849, SRR7889849.sralite SRA
SRX4727434 SRP126276 OTHER PAIRED
GSM3398060: 567_01; Homo sapiens; OTHER
Sample: SRS3810926
BioProject: PRJNA421346
BioSample: SAMN10102670
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: NFX1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889850 15467772 1701454920 576.23 567_01.R1.fastq.gz, 567_01.R2.fastq.gz, SRR7889850, SRR7889850.sralite SRA
SRX4727435 SRP126276 OTHER PAIRED
GSM3398061: 567_02; Homo sapiens; OTHER
Sample: SRS3810927
BioProject: PRJNA421346
BioSample: SAMN10102669
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: NFX1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889851 18471247 2031837170 684.54 567_02.R1.fastq.gz, 567_02.R2.fastq.gz, SRR7889851, SRR7889851.sralite SRA
SRX4727436 SRP126276 OTHER PAIRED
GSM3398062: 529_01; Homo sapiens; OTHER
Sample: SRS3810928
BioProject: PRJNA421346
BioSample: SAMN10102668
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: RPS24
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889852 27256888 2998257680 963.07 529_01.R1.fastq.gz, 529_01.R2.fastq.gz, SRR7889852, SRR7889852.sralite SRA
SRX4727437 SRP126276 OTHER PAIRED
GSM3398063: 529_02; Homo sapiens; OTHER
Sample: SRS3810929
BioProject: PRJNA421346
BioSample: SAMN10102667
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: RPS24
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889853 19472824 2142010640 688.05 529_02.R1.fastq.gz, 529_02.R2.fastq.gz, SRR7889853, SRR7889853.sralite SRA
SRX4727438 SRP126276 OTHER PAIRED
GSM3398064: 531_01; Homo sapiens; OTHER
Sample: SRS3810930
BioProject: PRJNA421346
BioSample: SAMN10102665
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A01,B06
antibody: RPS5
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889854 24498421 2694826310 908.49 531_01.R1.fastq.gz, 531_01.R2.fastq.gz, SRR7889854, SRR7889854.sralite SRA
SRX4727439 SRP126276 OTHER PAIRED
GSM3398065: 531_02; Homo sapiens; OTHER
Sample: SRS3810931
BioProject: PRJNA421346
BioSample: SAMN10102663
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: C01,D08fixed
antibody: RPS5
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889855 23673069 2604037590 875.75 531_02.R1.fastq.gz, 531_02.R2.fastq.gz, SRR7889855, SRR7889855.sralite SRA
SRX4727440 SRP126276 OTHER PAIRED
GSM3398066: 613_01; Homo sapiens; OTHER
Sample: SRS3810932
BioProject: PRJNA421346
BioSample: SAMN10102662
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: RPL23A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889856 20077886 2208567460 764.73 613_01.R1.fastq.gz, 613_01.R2.fastq.gz, SRR7889856, SRR7889856.sralite SRA
SRX4727441 SRP126276 OTHER PAIRED
GSM3398067: 613_02; Homo sapiens; OTHER
Sample: SRS3810933
BioProject: PRJNA421346
BioSample: SAMN10102661
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: RPL23A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889857 23406542 2574719620 894.31 613_02.R1.fastq.gz, 613_02.R2.fastq.gz, SRR7889857, SRR7889857.sralite SRA
SRX4727442 SRP126276 OTHER PAIRED
GSM3398068: 626_01; Homo sapiens; OTHER
Sample: SRS3810934
BioProject: PRJNA421346
BioSample: SAMN10102660
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: EIF4B
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889858 23757555 2613331050 907.98 626_01.R1.fastq.gz, 626_01.R2.fastq.gz, SRR7889858, SRR7889858.sralite SRA
SRX4727443 SRP126276 OTHER PAIRED
GSM3398069: 626_02; Homo sapiens; OTHER
Sample: SRS3810935
BioProject: PRJNA421346
BioSample: SAMN10102659
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: EIF4B
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889859 17828660 1961152600 679.17 626_02.R1.fastq.gz, 626_02.R2.fastq.gz, SRR7889859, SRR7889859.sralite SRA
SRX4727444 SRP126276 OTHER PAIRED
GSM3398070: 588_01; Homo sapiens; OTHER
Sample: SRS3810936
BioProject: PRJNA421346
BioSample: SAMN10102658
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: ZNF804A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889860 21127612 2366292544 725.96 588_01.R1.fastq.gz, 588_01.R2.fastq.gz, SRR7889860, SRR7889860.sralite SRA
SRX4727445 SRP126276 OTHER PAIRED
GSM3398071: 588_02; Homo sapiens; OTHER
Sample: SRS3810937
BioProject: PRJNA421346
BioSample: SAMN10102657
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: ZNF804A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889861 24255483 2716614096 841.59 588_02.R1.fastq.gz, 588_02.R2.fastq.gz, SRR7889861, SRR7889861.sralite SRA
SRX4727446 SRP126276 OTHER PAIRED
GSM3398072: 658_01; Homo sapiens; OTHER
Sample: SRS3810938
BioProject: PRJNA421346
BioSample: SAMN10102656
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: RPS5
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889862 15144118 1696141216 550.1 658_01.R1.fastq.gz, 658_01.R2.fastq.gz, SRR7889862, SRR7889862.sralite SRA
SRX4727447 SRP126276 OTHER PAIRED
GSM3398073: 658_02; Homo sapiens; OTHER
Sample: SRS3810939
BioProject: PRJNA421346
BioSample: SAMN10102655
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: RPS5
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889863 18078123 2024749776 656.99 658_02.R1.fastq.gz, 658_02.R2.fastq.gz, SRR7889863, SRR7889863.sralite SRA
SRX4727448 SRP126276 OTHER PAIRED
GSM3398074: 679_01; Homo sapiens; OTHER
Sample: SRS3810940
BioProject: PRJNA421346
BioSample: SAMN10102654
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: X1A,X1B
antibody: RPL23A
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889864 23569064 2639735168 843.15 679_01.R1.fastq.gz, 679_01.R2.fastq.gz, SRR7889864, SRR7889864.sralite SRA
SRX4727449 SRP126276 OTHER PAIRED
GSM3398075: 679_02; Homo sapiens; OTHER
Sample: SRS3810941
BioProject: PRJNA421346
BioSample: SAMN10102653
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: X2A,X2B
antibody: RPL23A
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889865 16982594 1902050528 604.76 679_02.R1.fastq.gz, 679_02.R2.fastq.gz, SRR7889865, SRR7889865.sralite SRA
SRX4727450 SRP126276 OTHER PAIRED
GSM3398076: 714_01; Homo sapiens; OTHER
Sample: SRS3810942
BioProject: PRJNA421346
BioSample: SAMN10102652
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: CNOT7
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889866 9878114 1086592540 396.97 714_01.R1.fastq.gz, 714_01.R2.fastq.gz, SRR7889866, SRR7889866.sralite SRA
SRX4727451 SRP126276 OTHER PAIRED
GSM3398077: 714_02; Homo sapiens; OTHER
Sample: SRS3810943
BioProject: PRJNA421346
BioSample: SAMN10102651
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A04,F05
antibody: CNOT7
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889867 11511449 1266259390 461.94 714_02.R1.fastq.gz, 714_02.R2.fastq.gz, SRR7889867, SRR7889867.sralite SRA
SRX4727452 SRP126276 OTHER PAIRED
GSM3398078: 647_01; Homo sapiens; OTHER
Sample: SRS3810944
BioProject: PRJNA421346
BioSample: SAMN10102650
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A03,G07
antibody: EIF4B
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889868 9006584 990724240 331.89 647_01.R1.fastq.gz, 647_01.R2.fastq.gz, SRR7889868, SRR7889868.sralite SRA
SRX4727453 SRP126276 OTHER PAIRED
GSM3398079: 647_02; Homo sapiens; OTHER
Sample: SRS3810945
BioProject: PRJNA421346
BioSample: SAMN10102684
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: A04,F05
antibody: EIF4B
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889869 32284960 3551345600 1283.62 647_02.R1.fastq.gz, 647_02.R2.fastq.gz, SRR7889869, SRR7889869.sralite SRA
SRX4727454 SRP126276 OTHER PAIRED
GSM3398080: 761_01; Homo sapiens; OTHER
Sample: SRS3810946
BioProject: PRJNA421346
BioSample: SAMN10102720
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A03,G07
antibody: SAFB2
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889870 17167249 1716724900 612.51 761_01.R1.fastq.gz, 761_01.R2.fastq.gz, SRR7889870, SRR7889870.sralite SRA
SRX4727455 SRP126276 OTHER PAIRED
GSM3398081: 761_02; Homo sapiens; OTHER
Sample: SRS3810947
BioProject: PRJNA421346
BioSample: SAMN10102719
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: A01,B06
antibody: SAFB2
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889871 17169566 1716956600 619.91 761_02.R1.fastq.gz, 761_02.R2.fastq.gz, SRR7889871, SRR7889871.sralite SRA
SRX4727456 SRP126276 OTHER PAIRED
GSM3398082: 332_INPUT; Homo sapiens; OTHER
Sample: SRS3810948
BioProject: PRJNA421346
BioSample: SAMN10102718
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: RBM27
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889872 22258170 1112908500 612.81 332_INPUT_GAATTCGT-TATAGCCT_L002_R1.unassigned.barcoded.fastq.gz, 332… SRA
SRX4727457 SRP126276 OTHER PAIRED
GSM3398083: 366_INPUT; Homo sapiens; OTHER
Sample: SRS3810950
BioProject: PRJNA421346
BioSample: SAMN10102717
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: TNRC6A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889873 27950614 1397530700 529.15 366_INPUT_ATTACTCG-CCTATCCT_L006_R1.unassigned.barcoded.fastq.gz, 366… SRA
SRX4727458 SRP126276 OTHER PAIRED
GSM3398084: 415_INPUT; Homo sapiens; OTHER
Sample: SRS3810949
BioProject: PRJNA421346
BioSample: SAMN10102723
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: TNRC6A
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889874 35797914 1789895700 675.56 415_INPUT_ATTCAGAA-ATAGAGGC_L006_R1.unassigned.barcoded.fastq.gz, 415… SRA
SRX4727459 SRP126276 OTHER PAIRED
GSM3398085: 417_INPUT; Homo sapiens; OTHER
Sample: SRS3810952
BioProject: PRJNA421346
BioSample: SAMN10102722
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: POLR2G
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889875 55128764 3032082020 1017.0 417_INPUT_S56_L006_R1_001.unassigned.barcoded.fastq.gz, 417_INPUT_S56… SRA
SRX4727460 SRP126276 OTHER PAIRED
GSM3398086: 529_INPUT; Homo sapiens; OTHER
Sample: SRS3810951
BioProject: PRJNA421346
BioSample: SAMN10102721
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: RPS24
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889876 46727724 2570024820 852.84 529_INPUT_S16_L002_R1_001.unassigned.barcoded.fastq.gz, 529_INPUT_S16… SRA
SRX4727461 SRP126276 OTHER PAIRED
GSM3398087: 531_INPUT; Homo sapiens; OTHER
Sample: SRS3810953
BioProject: PRJNA421346
BioSample: SAMN10102716
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: RPS5
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889877 50027552 2751515360 933.69 531_INPUT_S8_L001_R1_001.unassigned.barcoded.fastq.gz, 531_INPUT_S8_L… SRA
SRX4727462 SRP126276 OTHER PAIRED
GSM3398088: 567_INPUT; Homo sapiens; OTHER
Sample: SRS3810954
BioProject: PRJNA421346
BioSample: SAMN10102715
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: NFX1
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889878 43128566 2372071130 798.5 567_INPUT_S52_L006_R1_001.unassigned.barcoded.fastq.gz, 567_INPUT_S52… SRA
SRX4727463 SRP126276 OTHER PAIRED
GSM3398089: 588_INPUT; Homo sapiens; OTHER
Sample: SRS3810955
BioProject: PRJNA421346
BioSample: SAMN10102714
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: ZNF804A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889879 58069368 3251884608 1034.93 588_INPUT_S52_L005_R1_001.unassigned.barcoded.fastq.gz, 588_INPUT_S52… SRA
SRX4727464 SRP126276 OTHER PAIRED
GSM3398090: 613_INPUT; Homo sapiens; OTHER
Sample: SRS3810957
BioProject: PRJNA421346
BioSample: SAMN10102713
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: RPL23A
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889880 47134260 2592384300 882.65 613_INPUT_S44_L004_R1_001.unassigned.barcoded.fastq.gz, 613_INPUT_S44… SRA
SRX4727465 SRP126276 OTHER PAIRED
GSM3398091: 626_INPUT; Homo sapiens; OTHER
Sample: SRS3810956
BioProject: PRJNA421346
BioSample: SAMN10102712
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: EIF4B
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889881 38170954 2099402470 736.2 626_INPUT_S14_L005_R1_001.unassigned.barcoded.fastq.gz, 626_INPUT_S14… SRA
SRX4727466 SRP126276 OTHER PAIRED
GSM3398092: 647_INPUT; Homo sapiens; OTHER
Sample: SRS3810959
BioProject: PRJNA421346
BioSample: SAMN10102711
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: K562
barcodes: Rel19
antibody: EIF4B
cell line: K562
Original files (1)
K562
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889882 46067480 2533711400 877.89 647_INPUT_S24_L002_R1_001.unassigned.barcoded.fastq.gz, 647_INPUT_S24… SRA
SRX4727467 SRP126276 OTHER PAIRED
GSM3398093: 658_INPUT; Homo sapiens; OTHER
Sample: SRS3810958
BioProject: PRJNA421346
BioSample: SAMN10102710
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: RPS5
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889883 44875360 2513020160 835.0 658_INPUT_S27_L003_R1_001.unassigned.barcoded.fastq.gz, 658_INPUT_S27… SRA
SRX4727468 SRP126276 OTHER PAIRED
GSM3398094: 679_INPUT; Homo sapiens; OTHER
Sample: SRS3810960
BioProject: PRJNA421346
BioSample: SAMN10102709
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: RPL23A
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889884 53466172 2994105632 957.96 679_INPUT_S31_L003_R1_001.unassigned.barcoded.fastq.gz, 679_INPUT_S31… SRA
SRX4727469 SRP126276 OTHER PAIRED
GSM3398095: 714_INPUT; Homo sapiens; OTHER
Sample: SRS3810961
BioProject: PRJNA421346
BioSample: SAMN10102708
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: CNOT7
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889885 25967216 1428196880 532.52 714_INPUT_S34_L004_R1_001.unassigned.barcoded.fastq.gz, 714_INPUT_S34… SRA
SRX4727470 SRP126276 OTHER PAIRED
GSM3398096: 761_INPUT; Homo sapiens; OTHER
Sample: SRS3810962
BioProject: PRJNA421346
BioSample: SAMN10102707
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Homo sapiens
Sample attributes
source_name: HepG2
barcodes: Rel19
antibody: SAFB2
cell line: HepG2
Original files (1)
HepG2
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR7889886 41988958 2099447900 760.06 761_INPUT_S4_L001_R1_001.unassigned.barcoded.fastq.gz, 761_INPUT_S4_L… SRA

Linked Publications (2)

A large-scale binding and functional map of human RNA-binding proteins.
Nature · 2020
A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.
Scientific reports · 2019

Potentially Related Publications (1)

This accession was text-mined from the PMC full text of these publications. It may be referenced for comparison or reused from another study rather than generated for them.

A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.
Scientific reports · 2019

Data Files (309)

Accession File Name Stored Type Output Type Mapping Assembly Size Download
— 264_01.R1.fastq.gz OTHER 203.3 MB link
— 264_02.R1.fastq.gz OTHER 127.3 MB link
— 264_INPUT_GAGATTCC-AGGCGAAG_L001_R1.unassigned.barcode… OTHER 287.1 MB link
— 266_01.R1.fastq.gz OTHER 282.9 MB link
— 266_02.R1.fastq.gz OTHER 289.5 MB link
— 266_INPUT_ATTCAGAA-GGCTCTGA_L006_R1.unassigned.barcode… OTHER 646.0 MB link
— 299_01.R1.fastq.gz OTHER 844.6 MB link
— 299_02.R1.fastq.gz OTHER 1.2 GB link
— 299_INPUT_ATTACTCG-AGG_L003_R1.unassigned.barcoded.fas… OTHER 301.1 MB link
— 332_01.R1.fastq.gz OTHER 385.2 MB link
— 332_02.R1.fastq.gz OTHER 352.5 MB link
— 332_INPUT_GAATTCGT-TATAGCCT_L002_R1.unassigned.barcode… OTHER 612.8 MB link
— 355_01_4000.R1.fastq.gz OTHER 818.0 MB link
— 355_02_4000.R1.fastq.gz OTHER 760.6 MB link
— 355_INPUT_ATTCAGAA-AGGCGAAG_L001_R1.unassigned.barcode… OTHER 136.3 MB link
— 366_01.R1.fastq.gz OTHER 487.5 MB link
— 366_02.R1.fastq.gz OTHER 479.6 MB link
— 366_INPUT_ATTACTCG-CCTATCCT_L006_R1.unassigned.barcode… OTHER 529.1 MB link
— 415_01.R1.fastq.gz OTHER 475.3 MB link
— 415_02.R1.fastq.gz OTHER 354.4 MB link
— 415_INPUT_ATTCAGAA-ATAGAGGC_L006_R1.unassigned.barcode… OTHER 675.6 MB link
— 417_01.R1.fastq.gz OTHER 913.4 MB link
— 417_02.R1.fastq.gz OTHER 1.0 GB link
— 417_INPUT_S56_L006_R1_001.unassigned.barcoded.fastq.gz OTHER 1017.0 MB link
— 419_01.R1.fastq.gz OTHER 1.1 GB link
— 419_02.R1.fastq.gz OTHER 1.0 GB link
— 419_INPUT_S14_L002_R1_001.unassigned.barcoded.fastq.gz OTHER 932.5 MB link
— 451_01_4000.R1.fastq.gz OTHER 880.5 MB link
— 451_02_4000.R1.fastq.gz OTHER 1.6 GB link
— 451_INPUT_4000_S82_L006_R1_001.unassigned.barcoded.fas… OTHER 321.5 MB link
— 459_01.R1.fastq.gz OTHER 881.2 MB link
— 459_02.R1.fastq.gz OTHER 643.9 MB link
— 459_INPUT_S30_L003_R1_001.unassigned.barcoded.fastq.gz OTHER 984.7 MB link
— 463_01.R1.fastq.gz OTHER 315.9 MB link
— 463_02.R1.fastq.gz OTHER 277.2 MB link
— 463_INPUT_GAGATTCC-CCTATCCT_L003_R1.unassigned.barcode… OTHER 372.5 MB link
— 471_01.R1.fastq.gz OTHER 250.4 MB link
— 471_02.R1.fastq.gz OTHER 580.5 MB link
— 471_INPUT_S28_L003_R1_001.unassigned.barcoded.fastq.gz OTHER 482.4 MB link
— 485_01_4000.R1.fastq.gz OTHER 3.4 GB link
— 485_02_4000.R1.fastq.gz OTHER 2.6 GB link
— 485_INPUT_S42_L005_R1_001.unassigned.barcoded.fastq.gz OTHER 1.6 GB link
— 496_01.R1.fastq.gz OTHER 1.1 GB link
— 496_02.R1.fastq.gz OTHER 1.1 GB link
— 496_INPUT_S69_L008_R1_001.unassigned.barcoded.fastq.gz OTHER 1.0 GB link
— 498_01.R1.fastq.gz OTHER 896.5 MB link
— 498_02.R1.fastq.gz OTHER 735.4 MB link
— 498_INPUT_S46_L005_R1_001.unassigned.barcoded.fastq.gz OTHER 972.8 MB link
— 499_01.R1.fastq.gz OTHER 982.6 MB link
— 499_02.R1.fastq.gz OTHER 1016.3 MB link
— 499_INPUT_S48_L005_R1_001.unassigned.barcoded.fastq.gz OTHER 850.1 MB link
— 510_01.R1.fastq.gz OTHER 760.9 MB link
— 510_02.R1.fastq.gz OTHER 765.4 MB link
— 510_INPUT_S4_L001_R1_001.unassigned.barcoded.fastq.gz OTHER 1.1 GB link
— 512_01.R1.fastq.gz OTHER 1.1 GB link
— 512_02.R1.fastq.gz OTHER 1.1 GB link
— 512_INPUT_S67_L008_R1_001.unassigned.barcoded.fastq.gz OTHER 1.1 GB link
— 513_01.R1.fastq.gz OTHER 744.3 MB link
— 513_02.R1.fastq.gz OTHER 767.8 MB link
— 513_INPUT_S45_L004_R1_001.unassigned.barcoded.fastq.gz OTHER 998.9 MB link
— 520_01.R1.fastq.gz OTHER 603.6 MB link
— 520_02.R1.fastq.gz OTHER 706.1 MB link
— 520_INPUT_S24_L003_R1_001.unassigned.barcoded.fastq.gz OTHER 747.8 MB link
— 523_01.R1.fastq.gz OTHER 816.2 MB link
— 523_02.R1.fastq.gz OTHER 910.6 MB link
— 523_INPUT_S6_L001_R1_001.unassigned.barcoded.fastq.gz OTHER 996.8 MB link
— 529_01.R1.fastq.gz OTHER 963.1 MB link
— 529_02.R1.fastq.gz OTHER 688.0 MB link
— 529_INPUT_S16_L002_R1_001.unassigned.barcoded.fastq.gz OTHER 852.8 MB link
— 531_01.R1.fastq.gz OTHER 908.5 MB link
— 531_02.R1.fastq.gz OTHER 875.8 MB link
— 531_INPUT_S8_L001_R1_001.unassigned.barcoded.fastq.gz OTHER 933.7 MB link
— 534_01.R1.fastq.gz OTHER 806.6 MB link
— 534_02.R1.fastq.gz OTHER 500.0 MB link
— 534_INPUT_S2_L001_R1_001.unassigned.barcoded.fastq.gz OTHER 644.6 MB link
— 535_01.R1.fastq.gz OTHER 719.9 MB link
— 535_02.R1.fastq.gz OTHER 866.2 MB link
— 535_INPUT_S57_L006_R1_001.unassigned.barcoded.fastq.gz OTHER 695.3 MB link
— 536_01.R1.fastq.gz OTHER 693.7 MB link
— 536_02.R1.fastq.gz OTHER 687.3 MB link
— 536_INPUT_S23_L003_R1_001.unassigned.barcoded.fastq.gz OTHER 866.0 MB link
— 541_01.R1.fastq.gz OTHER 518.8 MB link
— 541_02.R1.fastq.gz OTHER 698.8 MB link
— 541_INPUT_S61_L007_R1_001.unassigned.barcoded.fastq.gz OTHER 607.0 MB link
— 547_01.R1.fastq.gz OTHER 1020.2 MB link
— 547_02.R1.fastq.gz OTHER 1.0 GB link
— 547_INPUT_S5_L001_R1_001.unassigned.barcoded.fastq.gz OTHER 1.1 GB link
— 555_01.R1.fastq.gz OTHER 534.4 MB link
— 555_02.R1.fastq.gz OTHER 977.8 MB link
— 555_INPUT_S5_L001_R1_001.unassigned.barcoded.fastq.gz OTHER 1.3 GB link
— 567_01.R1.fastq.gz OTHER 576.2 MB link
— 567_02.R1.fastq.gz OTHER 684.5 MB link
— 567_INPUT_S52_L006_R1_001.unassigned.barcoded.fastq.gz OTHER 798.5 MB link
— 588_01.R1.fastq.gz OTHER 726.0 MB link
— 588_02.R1.fastq.gz OTHER 841.6 MB link
— 588_INPUT_S52_L005_R1_001.unassigned.barcoded.fastq.gz OTHER 1.0 GB link
— 598_01.R1.fastq.gz OTHER 513.2 MB link
— 598_02.R1.fastq.gz OTHER 737.3 MB link
— 598_INPUT_S18_L002_R1_001.unassigned.barcoded.fastq.gz OTHER 932.4 MB link
— 609_01.R1.fastq.gz OTHER 1.2 GB link
— 609_02.R1.fastq.gz OTHER 946.4 MB link
— 609_INPUT_S39_L004_R1_001.unassigned.barcoded.fastq.gz OTHER 1.2 GB link
— 611_01.R1.fastq.gz OTHER 745.3 MB link
— 611_02.R1.fastq.gz OTHER 277.4 MB link
— 611_INPUT_S30_L003_R1_001.unassigned.barcoded.fastq.gz OTHER 676.5 MB link
— 613_01.R1.fastq.gz OTHER 764.7 MB link
— 613_02.R1.fastq.gz OTHER 894.3 MB link
— 613_INPUT_S44_L004_R1_001.unassigned.barcoded.fastq.gz OTHER 882.6 MB link
— 616_01.R1.fastq.gz OTHER 757.2 MB link
— 616_02.R1.fastq.gz OTHER 815.1 MB link
— 616_INPUT_S6_L004_R1_001.unassigned.barcoded.fastq.gz OTHER 837.8 MB link
— 626_01.R1.fastq.gz OTHER 908.0 MB link
— 626_01.R2.fastq.gz OTHER 908.0 MB link
— 626_02.R1.fastq.gz OTHER 679.2 MB link
— 626_INPUT_S14_L005_R1_001.unassigned.barcoded.fastq.gz OTHER 736.2 MB link
— 647_01.R1.fastq.gz OTHER 331.9 MB link
— 647_02.R1.fastq.gz OTHER 1.3 GB link
— 647_INPUT_S24_L002_R1_001.unassigned.barcoded.fastq.gz OTHER 877.9 MB link
— 658_01.R1.fastq.gz OTHER 550.1 MB link
— 658_02.R1.fastq.gz OTHER 657.0 MB link
— 658_INPUT_S27_L003_R1_001.unassigned.barcoded.fastq.gz OTHER 835.0 MB link
— 658_INPUT_S27_L003_R2_001.unassigned.barcoded.fastq.gz OTHER 835.0 MB link
— 662_01.R1.fastq.gz OTHER 1.1 GB link
— 662_02.R1.fastq.gz OTHER 882.5 MB link
— 662_INPUT_S7_L006_R1_001.unassigned.barcoded.fastq.gz OTHER 679.5 MB link
— 669_01.R1.fastq.gz OTHER 1.7 GB link
— 669_02.R1.fastq.gz OTHER 201.3 MB link
— 669_INPUT_S12_L002_R1_001.unassigned.barcoded.fastq.gz OTHER 788.4 MB link
— 674_01.R1.fastq.gz OTHER 545.2 MB link
— 674_02.R1.fastq.gz OTHER 574.0 MB link
— 674_INPUT_S78_L004_R1_001.unassigned.barcoded.fastq.gz OTHER 806.4 MB link
— 674_INPUT_S78_L004_R2_001.unassigned.barcoded.fastq.gz OTHER 806.4 MB link
— 679_01.R1.fastq.gz OTHER 843.1 MB link
— 679_02.R1.fastq.gz OTHER 604.8 MB link
— 679_02.R2.fastq.gz OTHER 604.8 MB link
— 679_INPUT_S31_L003_R1_001.unassigned.barcoded.fastq.gz OTHER 958.0 MB link
— 706_01.R1.fastq.gz OTHER 1.1 GB link
— 706_02.R1.fastq.gz OTHER 1.9 GB link
— 706_INPUT_S49_L005_R1_001.unassigned.barcoded.fastq.gz OTHER 647.6 MB link
— 714_01.R1.fastq.gz OTHER 397.0 MB link
— 714_02.R1.fastq.gz OTHER 461.9 MB link
— 714_INPUT_S34_L004_R1_001.unassigned.barcoded.fastq.gz OTHER 532.5 MB link
— 721_01.R1.fastq.gz OTHER 1.1 GB link
— 721_02.R1.fastq.gz OTHER 735.5 MB link
— 721_INPUT_S77_L007_R1_001.unassigned.barcoded.fastq.gz OTHER 732.9 MB link
— 724_01.R1.fastq.gz OTHER 770.7 MB link
— 724_02.R1.fastq.gz OTHER 708.9 MB link
— 724_INPUT_S83_L008_R1_001.unassigned.barcoded.fastq.gz OTHER 647.5 MB link
— 739_01.R1.fastq.gz OTHER 911.7 MB link
— 739_02.R1.fastq.gz OTHER 870.9 MB link
— 739_INPUT_S112_L008_R1_001.unassigned.barcoded.fastq.gz OTHER 712.9 MB link
— 761_01.R1.fastq.gz OTHER 612.5 MB link
— 761_02.R1.fastq.gz OTHER 619.9 MB link
— 761_02.R2.fastq.gz OTHER 619.9 MB link
— 761_INPUT_S4_L001_R1_001.unassigned.barcoded.fastq.gz OTHER 760.1 MB link
— SRR6458659_GSM2878474 OTHER 282.0 MB link
— SRR6458660_GSM2878475 OTHER 289.0 MB link
— SRR6458661_GSM2878476 OTHER 203.0 MB link
— SRR6458662_GSM2878477 OTHER 127.0 MB link
— SRR6458663_GSM2878478 OTHER 844.0 MB link
— SRR6458664_GSM2878479 OTHER 1.2 GB link
— SRR6458665_GSM2878480 OTHER 315.0 MB link
— SRR6458666_GSM2878481 OTHER 277.0 MB link
— SRR6458667_GSM2878482 OTHER 1.1 GB link
— SRR6458668_GSM2878483 OTHER 1.0 GB link
— SRR6458669_GSM2878484 OTHER 1.1 GB link
— SRR6458670_GSM2878485 OTHER 1.1 GB link
— SRR6458671_GSM2878486 OTHER 896.0 MB link
— SRR6458672_GSM2878487 OTHER 735.0 MB link
— SRR6458673_GSM2878488 OTHER 982.0 MB link
— SRR6458674_GSM2878489 OTHER 1016.0 MB link
— SRR6458675_GSM2878490 OTHER 1.1 GB link
— SRR6458676_GSM2878491 OTHER 1.0 GB link
— SRR6458677_GSM2878492 OTHER 881.0 MB link
— SRR6458678_GSM2878493 OTHER 643.0 MB link
— SRR6458679_GSM2878494 OTHER 250.0 MB link
— SRR6458680_GSM2878495 OTHER 580.0 MB link
— SRR6458681_GSM2878496 OTHER 760.0 MB link
— SRR6458682_GSM2878497 OTHER 765.0 MB link
— SRR6458683_GSM2878498 OTHER 744.0 MB link
— SRR6458684_GSM2878499 OTHER 767.0 MB link
— SRR6458685_GSM2878500 OTHER 719.0 MB link
— SRR6458686_GSM2878501 OTHER 866.0 MB link
— SRR6458687_GSM2878502 OTHER 693.0 MB link
— SRR6458688_GSM2878503 OTHER 687.0 MB link
— SRR6458689_GSM2878504 OTHER 518.0 MB link
— SRR6458690_GSM2878505 OTHER 698.0 MB link
— SRR6458691_GSM2878506 OTHER 1020.0 MB link
— SRR6458692_GSM2878507 OTHER 1.0 GB link
— SRR6458693_GSM2878508 OTHER 818.0 MB link
— SRR6458694_GSM2878509 OTHER 760.0 MB link
— SRR6458695_GSM2878510 OTHER 806.0 MB link
— SRR6458696_GSM2878511 OTHER 499.0 MB link
— SRR6458697_GSM2878512 OTHER 513.0 MB link
— SRR6458698_GSM2878513 OTHER 737.0 MB link
— SRR6458699_GSM2878514 OTHER 603.0 MB link
— SRR6458700_GSM2878515 OTHER 706.0 MB link
— SRR6458701_GSM2878516 OTHER 816.0 MB link
— SRR6458702_GSM2878517 OTHER 910.0 MB link
— SRR6458703_GSM2878518 OTHER 745.0 MB link
— SRR6458704_GSM2878519 OTHER 277.0 MB link
— SRR6458705_GSM2878520 OTHER 757.0 MB link
— SRR6458706_GSM2878521 OTHER 815.0 MB link
— SRR6458707_GSM2878522 OTHER 880.0 MB link
— SRR6458708_GSM2878523 OTHER 1.6 GB link
— SRR6458709_GSM2878524 OTHER 3.4 GB link
— SRR6458710_GSM2878525 OTHER 2.6 GB link
— SRR6458711_GSM2878526 OTHER 534.0 MB link
— SRR6458712_GSM2878527 OTHER 977.0 MB link
— SRR6458713_GSM2878528 OTHER 1.2 GB link
— SRR6458714_GSM2878529 OTHER 946.0 MB link
— SRR6458715_GSM2878530 OTHER 545.0 MB link
— SRR6458716_GSM2878531 OTHER 574.0 MB link
— SRR6458717_GSM2878532 OTHER 1.1 GB link
— SRR6458718_GSM2878533 OTHER 735.0 MB link
— SRR6458719_GSM2878534 OTHER 770.0 MB link
— SRR6458720_GSM2878535 OTHER 708.0 MB link
— SRR6458721_GSM2878536 OTHER 1.1 GB link
— SRR6458722_GSM2878537 OTHER 882.0 MB link
— SRR6458723_GSM2878538 OTHER 1.1 GB link
— SRR6458724_GSM2878539 OTHER 1.9 GB link
— SRR6458725_GSM2878540 OTHER 911.0 MB link
— SRR6458726_GSM2878541 OTHER 870.0 MB link
— SRR6458727_GSM2878542 OTHER 1.7 GB link
— SRR6458728_GSM2878543 OTHER 201.0 MB link
— SRR6458729_GSM2878544 OTHER 287.0 MB link
— SRR6458730_GSM2878545 OTHER 645.0 MB link
— SRR6458731_GSM2878546 OTHER 301.0 MB link
— SRR6458732_GSM2878547 OTHER 136.0 MB link
— SRR6458733_GSM2878548 OTHER 932.0 MB link
— SRR6458734_GSM2878549 OTHER 321.0 MB link
— SRR6458735_GSM2878550 OTHER 984.0 MB link
— SRR6458736_GSM2878551 OTHER 372.0 MB link
— SRR6458737_GSM2878552 OTHER 482.0 MB link
— SRR6458738_GSM2878553 OTHER 1.6 GB link
— SRR6458739_GSM2878554 OTHER 1.0 GB link
— SRR6458740_GSM2878555 OTHER 972.0 MB link
— SRR6458741_GSM2878556 OTHER 850.0 MB link
— SRR6458742_GSM2878557 OTHER 1.1 GB link
— SRR6458743_GSM2878558 OTHER 1.1 GB link
— SRR6458744_GSM2878559 OTHER 998.0 MB link
— SRR6458745_GSM2878560 OTHER 747.0 MB link
— SRR6458746_GSM2878561 OTHER 996.0 MB link
— SRR6458747_GSM2878562 OTHER 644.0 MB link
— SRR6458748_GSM2878563 OTHER 695.0 MB link
— SRR6458749_GSM2878564 OTHER 865.0 MB link
— SRR6458750_GSM2878565 OTHER 606.0 MB link
— SRR6458751_GSM2878566 OTHER 1.1 GB link
— SRR6458752_GSM2878567 OTHER 1.3 GB link
— SRR6458753_GSM2878568 OTHER 932.0 MB link
— SRR6458754_GSM2878569 OTHER 1.2 GB link
— SRR6458755_GSM2878570 OTHER 676.0 MB link
— SRR6458756_GSM2878571 OTHER 837.0 MB link
— SRR6458757_GSM2878572 OTHER 679.0 MB link
— SRR6458758_GSM2878573 OTHER 788.0 MB link
— SRR6458759_GSM2878574 OTHER 806.0 MB link
— SRR6458760_GSM2878575 OTHER 647.0 MB link
— SRR6458761_GSM2878576 OTHER 732.0 MB link
— SRR6458762 OTHER 647.5 MB link
— SRR6458762_GSM2878577 OTHER 647.0 MB link
— SRR6458763_GSM2878578 OTHER 712.0 MB link
— SRR7889842_GSM3398052 OTHER 385.0 MB link
— SRR7889843_GSM3398053 OTHER 352.0 MB link
— SRR7889844_GSM3398054 OTHER 487.0 MB link
— SRR7889845_GSM3398055 OTHER 479.0 MB link
— SRR7889846_GSM3398056 OTHER 475.0 MB link
— SRR7889847 OTHER 354.4 MB link
— SRR7889847_GSM3398057 OTHER 354.0 MB link
— SRR7889848_GSM3398058 OTHER 913.0 MB link
— SRR7889849_GSM3398059 OTHER 1.0 GB link
— SRR7889850_GSM3398060 OTHER 576.0 MB link
— SRR7889851_GSM3398061 OTHER 684.0 MB link
— SRR7889852_GSM3398062 OTHER 963.0 MB link
— SRR7889853_GSM3398063 OTHER 688.0 MB link
— SRR7889854_GSM3398064 OTHER 908.0 MB link
— SRR7889855_GSM3398065 OTHER 875.0 MB link
— SRR7889856_GSM3398066 OTHER 764.0 MB link
— SRR7889857_GSM3398067 OTHER 894.0 MB link
— SRR7889858_GSM3398068 OTHER 907.0 MB link
— SRR7889859_GSM3398069 OTHER 679.0 MB link
— SRR7889860_GSM3398070 OTHER 725.0 MB link
— SRR7889861_GSM3398071 OTHER 841.0 MB link
— SRR7889862_GSM3398072 OTHER 550.0 MB link
— SRR7889863_GSM3398073 OTHER 656.0 MB link
— SRR7889864_GSM3398074 OTHER 843.0 MB link
— SRR7889865_GSM3398075 OTHER 604.0 MB link
— SRR7889866_GSM3398076 OTHER 396.0 MB link
— SRR7889867_GSM3398077 OTHER 461.0 MB link
— SRR7889868_GSM3398078 OTHER 331.0 MB link
— SRR7889869_GSM3398079 OTHER 1.3 GB link
— SRR7889870_GSM3398080 OTHER 612.0 MB link
— SRR7889871_GSM3398081 OTHER 619.0 MB link
— SRR7889872_GSM3398082 OTHER 612.0 MB link
— SRR7889873_GSM3398083 OTHER 529.0 MB link
— SRR7889874_GSM3398084 OTHER 675.0 MB link
— SRR7889875 OTHER 1017.0 MB link
— SRR7889875_GSM3398085 OTHER 1017.0 MB link
— SRR7889876_GSM3398086 OTHER 852.0 MB link
— SRR7889877_GSM3398087 OTHER 933.0 MB link
— SRR7889878_GSM3398088 OTHER 798.0 MB link
— SRR7889879 OTHER 1.0 GB link
— SRR7889879_GSM3398089 OTHER 1.0 GB link
— SRR7889880_GSM3398090 OTHER 882.0 MB link
— SRR7889881_GSM3398091 OTHER 736.0 MB link
— SRR7889882_GSM3398092 OTHER 877.0 MB link
— SRR7889883_GSM3398093 OTHER 834.0 MB link
— SRR7889884_GSM3398094 OTHER 957.0 MB link
— SRR7889885_GSM3398095 OTHER 532.0 MB link
— SRR7889886_GSM3398096 OTHER 760.0 MB link