ENCSR862QCH
ENCSR ENCODEeCLIP experiment on K562 against U2AF1
Organism:
Homo sapiens
Experiment Types:
eCLIP
Status:
released
Contact:
Gene Yeo, UCSD
Relations
Summary
eCLIP of U2AF1 in Homo sapiens K562
Analysis
View Data Processing
Analysis page is available for ENCSR862QCH.
ENCODE Metadata
Total file size: 1.8 GBAssay: eCLIP
Target: U2AF1
Biosample: Homo sapiens K562
Files: 36
Unique ENC file IDs: 36
File Formats
bed (10)
bigBed (10)
bigWig (8)
bam (4)
fastq (4)
Output types (5)
peaks (20)
alignments (4)
minus strand signal of unique reads (4)
plus strand signal of unique reads (4)
reads (4)
Linked Publications (3)
An important class of intron retention events in human erythroblasts is regulated by cryptic exons proposed to function as splicing decoys.
RNA (New York, N.Y.) · 2018
Data Files (36)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF132PVT | ENCFF132PVT.bam | bam (alignments) | alignments | 127.7 MB | link | ||
| ENCFF314SWS | ENCFF314SWS.bam | bam (alignments) | alignments | 185.2 MB | link | ||
| ENCFF367JCV | ENCFF367JCV.bam | bam (alignments) | alignments | 129.1 MB | link | ||
| ENCFF425GCF | ENCFF425GCF.bam | bam (alignments) | alignments | 187.1 MB | link | ||
| ENCFF007KJO | ENCFF007KJO.bed | bed (peaks) | peaks | 535.0 KB | link | ||
| ENCFF163SWW | ENCFF163SWW.bed | bed (peaks) | peaks | 27.3 KB | link | ||
| ENCFF259XOH | ENCFF259XOH.bed | bed (peaks) | peaks | 692.6 KB | link | ||
| ENCFF362XUO | ENCFF362XUO.bed | bed (peaks) | peaks | 1.2 MB | link | ||
| ENCFF468LUS | ENCFF468LUS.bed | bed (peaks) | peaks | 865.9 KB | link | ||
| ENCFF483ODR | ENCFF483ODR.bed | bed (peaks) | peaks | 867.1 KB | link | ||
| ENCFF555DWV | ENCFF555DWV.bed | bed (peaks) | peaks | 1.2 MB | link | ||
| ENCFF584WFG | ENCFF584WFG.bed | bed (peaks) | peaks | 263.3 KB | link | ||
| ENCFF640IHY | ENCFF640IHY.bed | bed (peaks) | peaks | 27.3 KB | link | ||
| ENCFF840LLJ | ENCFF840LLJ.bed | bed (peaks) | peaks | 203.5 KB | link | ||
| ENCFF129MRQ | ENCFF129MRQ.bigBed | bigBed (peaks) | peaks | 2.0 MB | link | ||
| ENCFF160QIG | ENCFF160QIG.bigBed | bigBed (peaks) | peaks | 1.0 MB | link | ||
| ENCFF163SZQ | ENCFF163SZQ.bigBed | bigBed (peaks) | peaks | 1.5 MB | link | ||
| ENCFF331EAF | ENCFF331EAF.bigBed | bigBed (peaks) | peaks | 1.5 MB | link | ||
| ENCFF346WCF | ENCFF346WCF.bigBed | bigBed (peaks) | peaks | 2.7 MB | link | ||
| ENCFF420SMK | ENCFF420SMK.bigBed | bigBed (peaks) | peaks | 2.1 MB | link | ||
| ENCFF459QRI | ENCFF459QRI.bigBed | bigBed (peaks) | peaks | 498.2 KB | link | ||
| ENCFF612ERE | ENCFF612ERE.bigBed | bigBed (peaks) | peaks | 1.3 MB | link | ||
| ENCFF856BKY | ENCFF856BKY.bigBed | bigBed (peaks) | peaks | 2.0 MB | link | ||
| ENCFF857TTP | ENCFF857TTP.bigBed | bigBed (peaks) | peaks | 615.2 KB | link | ||
| ENCFF262KAI | ENCFF262KAI.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 12.6 MB | link | ||
| ENCFF362OME | ENCFF362OME.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 7.0 MB | link | ||
| ENCFF672OHA | ENCFF672OHA.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 12.7 MB | link | ||
| ENCFF822MGE | ENCFF822MGE.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 7.0 MB | link | ||
| ENCFF164HBW | ENCFF164HBW.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 13.2 MB | link | ||
| ENCFF364VVL | ENCFF364VVL.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 9.6 MB | link | ||
| ENCFF607AXF | ENCFF607AXF.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 13.1 MB | link | ||
| ENCFF939EXV | ENCFF939EXV.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 9.5 MB | link | ||
| ENCFF208AKL | ENCFF208AKL.fastq | fastq (reads) | reads | 243.9 MB | link | ||
| ENCFF663SQD | ENCFF663SQD.fastq | fastq (reads) | reads | 298.5 MB | link | ||
| ENCFF818OSI | ENCFF818OSI.fastq | fastq (reads) | reads | 233.0 MB | link | ||
| ENCFF936MBM | ENCFF936MBM.fastq | fastq (reads) | reads | 288.1 MB | link |