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Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins.

Genome biology · 2020 · Vol. 21 (1) · pp. 90

Abstract

A critical step in uncovering rules of RNA processing is to study the in vivo regulatory networks of RNA binding proteins (RBPs). Crosslinking and immunoprecipitation (CLIP) methods enable mapping RBP targets transcriptome-wide, but methodological differences present challenges to large-scale analysis across datasets. The development of enhanced CLIP (eCLIP) enabled the mapping of targets for 150 RBPs in K562 and HepG2, creating a unique resource of RBP interactomes profiled with a standardized methodology in the same cell types. Our analysis of 223 eCLIP datasets reveals a range of binding modalities, including highly resolved positioning around splicing signals and mRNA untranslated regions that associate with distinct RBP functions. Quantification of enrichment for repetitive and abundant multicopy elements reveals 70% of RBPs have enrichment for non-mRNA element classes, enables identification of novel ribosomal RNA processing factors and sites, and suggests that association with retrotransposable elements reflects multiple RBP mechanisms of action. Analysis of spliceosomal RBPs indicates that eCLIP resolves AQR association after intronic lariat formation, enabling identification of branch points with single-nucleotide resolution, and provides genome-wide validation for a branch point-based scanning model for 3' splice site recognition. Finally, we show that eCLIP peak co-occurrences across RBPs enable the discovery of novel co-interacting RBPs. This work reveals novel insights into RNA biology by integrated analysis of eCLIP profiling of 150 RBPs with distinct functions. Further, our quantification of both mRNA and other element association will enable further research to identify novel roles of RBPs in regulating RNA processing.

Publication Types

["Journal Article", "Research Support, N.I.H., Extramural", "Research Support, Non-U.S. Gov't"]

Keywords

MeSH Terms

["Binding Sites", "Hep G2 Cells", "Humans", "Immunoprecipitation", "Introns", "K562 Cells", "RNA", "RNA Processing, Post-Transcriptional", "RNA Splicing", "RNA, Ribosomal", "RNA-Binding Proteins", "Repetitive Sequences, Nucleic Acid", "Retroelements", "Spliceosomes"]

Funding

R01 HG004659 NHGRI NIH HHS (United States)
R00 HG009530 NHGRI NIH HHS (United States)
U41 HG009889 NHGRI NIH HHS (United States)
T32 GM145427 NIGMS NIH HHS (United States)
T32 GM008666 NIGMS NIH HHS (United States)
K99 HG009530 NHGRI NIH HHS (United States)
U54 HG007005 NHGRI NIH HHS (United States)

Linked Datasets (446)

ENCSR423QXH ENCSR via encode_api

eCLIP control experiment on HepG2 against KHSRP

Homo sapiens
8 data files
FileTypeSize
ENCFF257IPS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 26.2 MB
ENCFF624GDF.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 26.7 MB
ENCFF638CND.fastq fastq (reads) 769.9 MB
ENCFF665FHS.fastq fastq (reads) 718.1 MB
ENCFF696LDT.bam bam (alignments); assembly: GRCh38 694.5 MB
ENCFF792HHG.bam bam (alignments); assembly: hg19 679.8 MB
ENCFF884SHN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 26.0 MB
ENCFF904AQP.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 26.5 MB
ENCSR615ZYL ENCSR via encode_api

eCLIP control experiment on K562 against ZNF800

Homo sapiens
8 data files
FileTypeSize
ENCFF034ROO.fastq fastq (reads) 821.9 MB
ENCFF206XKH.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.1 MB
ENCFF208BCL.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.7 MB
ENCFF369AIZ.fastq fastq (reads) 815.5 MB
ENCFF437VSN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.4 MB
ENCFF609LFM.bam bam (alignments); assembly: GRCh38 342.5 MB
ENCFF707KQZ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.8 MB
ENCFF762HKJ.bam bam (alignments); assembly: hg19 332.5 MB
ENCSR701QEP ENCSR via encode_api

eCLIP control experiment on HepG2 against STAU2

Homo sapiens
8 data files
FileTypeSize
ENCFF053PON.fastq fastq (reads) 503.6 MB
ENCFF118WBK.bam bam (alignments); assembly: GRCh38 448.0 MB
ENCFF278UYQ.fastq fastq (reads) 527.6 MB
ENCFF552YTV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.6 MB
ENCFF595GJE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 20.9 MB
ENCFF675UWE.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 21.2 MB
ENCFF737HQI.bam bam (alignments); assembly: hg19 438.4 MB
ENCFF950KPW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 21.6 MB
ENCSR322KLN ENCSR via encode_api

eCLIP control experiment on K562 against PCBP1

Homo sapiens
8 data files
FileTypeSize
ENCFF300SEB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 16.3 MB
ENCFF419JXA.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 15.5 MB
ENCFF483ILV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.9 MB
ENCFF524GUO.bam bam (alignments); assembly: hg19 353.1 MB
ENCFF540QQX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 16.6 MB
ENCFF647AFT.bam bam (alignments); assembly: GRCh38 359.3 MB
ENCFF747VRT.fastq fastq (reads) 692.0 MB
ENCFF998SFM.fastq fastq (reads) 741.0 MB
ENCSR973HOJ ENCSR via encode_api

eCLIP experiment on HepG2 against FXR2

Homo sapiens
26 data files
FileTypeSize
ENCFF004VKR.bigBed bigBed (peaks); assembly: hg19 2.1 MB
ENCFF032TZM.bam bam (alignments); assembly: hg19 241.1 MB
ENCFF034XGK.fastq fastq (reads) 554.0 MB
ENCFF074OYO.fastq fastq (reads) 479.6 MB
ENCFF112MVG.bed bed (peaks); assembly: GRCh38 84.1 KB
ENCFF149CJJ.bed bed (peaks); assembly: hg19 85.5 KB
ENCFF157JBC.bam bam (alignments); assembly: GRCh38 226.9 MB
ENCFF159MBO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.7 MB
ENCFF246SBA.bed bed (peaks); assembly: hg19 863.8 KB
ENCFF272DGX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.4 MB
ENCFF300OPL.fastq fastq (reads) 563.4 MB
ENCFF385GCC.bam bam (alignments); assembly: hg19 187.9 MB
ENCFF410VWB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 9.7 MB
ENCFF445MKT.bigBed bigBed (peaks); assembly: GRCh38 1.5 MB
ENCFF450CWZ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.1 MB
ENCFF483HFI.bigBed bigBed (peaks); assembly: GRCh38 2.1 MB
ENCFF499FPK.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.6 MB
ENCFF500VOG.bam bam (alignments); assembly: GRCh38 180.9 MB
ENCFF528ZUW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.7 MB
ENCFF638WRZ.bed bed (peaks); assembly: GRCh38 849.1 KB
ENCFF702QGF.bed bed (peaks); assembly: GRCh38 1022.7 KB
ENCFF733GMZ.fastq fastq (reads) 485.9 MB
ENCFF758DRK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.2 MB
ENCFF815YGA.bed bed (peaks); assembly: hg19 1.0 MB
ENCFF934FRF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.2 MB
ENCFF939JDG.bigBed bigBed (peaks); assembly: hg19 1.5 MB
ENCSR308YNT ENCSR via encode_api

eCLIP experiment on K562 against PUM1

Homo sapiens
26 data files
FileTypeSize
ENCFF004UZD.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.4 MB
ENCFF019LLG.fastq fastq (reads) 600.2 MB
ENCFF022IWU.bed bed (peaks); assembly: GRCh38 954.3 KB
ENCFF046QBX.fastq fastq (reads) 460.7 MB
ENCFF060XYT.bed bed (peaks); assembly: hg19 959.5 KB
ENCFF064COB.bam bam (alignments); assembly: GRCh38 172.5 MB
ENCFF094MQV.bed bed (peaks); assembly: GRCh38 61.0 KB
ENCFF116YKN.fastq fastq (reads) 529.9 MB
ENCFF123VNX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.7 MB
ENCFF143ACO.bigBed bigBed (peaks); assembly: GRCh38 1.9 MB
ENCFF183BXI.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.1 MB
ENCFF311WSE.bigBed bigBed (peaks); assembly: hg19 1.9 MB
ENCFF322IKX.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF353WDF.bam bam (alignments); assembly: hg19 183.0 MB
ENCFF353ZJC.fastq fastq (reads) 516.1 MB
ENCFF369TUQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 9.7 MB
ENCFF425EDT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.3 MB
ENCFF463VDB.bam bam (alignments); assembly: hg19 188.0 MB
ENCFF504KGD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.3 MB
ENCFF583QFB.bam bam (alignments); assembly: GRCh38 181.4 MB
ENCFF620UYD.bed bed (peaks); assembly: GRCh38 919.0 KB
ENCFF802ZLH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.9 MB
ENCFF835JOX.bigBed bigBed (peaks); assembly: GRCh38 1.9 MB
ENCFF868WSG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.0 MB
ENCFF933SBL.bed bed (peaks); assembly: hg19 934.8 KB
ENCFF969AOQ.bed bed (peaks); assembly: hg19 60.5 KB
ENCSR266XXD ENCSR via encode_api

eCLIP control experiment on K562 against DDX21

Homo sapiens
8 data files
FileTypeSize
ENCFF116DWQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.3 MB
ENCFF212EDY.bam bam (alignments); assembly: GRCh38 314.6 MB
ENCFF394GDV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 15.1 MB
ENCFF421KCB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 15.8 MB
ENCFF445UCY.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 15.6 MB
ENCFF787VFD.bam bam (alignments); assembly: hg19 311.9 MB
ENCFF790GSX.fastq fastq (reads) 426.5 MB
ENCFF953OQX.fastq fastq (reads) 418.3 MB
ENCSR761AJD ENCSR via encode_api

eCLIP control experiment on K562 against EIF3G

Homo sapiens
8 data files
FileTypeSize
ENCFF348UCA.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.7 MB
ENCFF384MIZ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.9 MB
ENCFF528GOF.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.0 MB
ENCFF539DGJ.fastq fastq (reads) 304.6 MB
ENCFF725BSE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.7 MB
ENCFF743HXX.fastq fastq (reads) 284.3 MB
ENCFF750DBW.bam bam (alignments); assembly: hg19 123.9 MB
ENCFF759JDI.bam bam (alignments); assembly: GRCh38 124.8 MB
ENCSR903PRV ENCSR via encode_api

eCLIP experiment on HepG2 against FTO

Homo sapiens
32 data files
FileTypeSize
ENCFF021RLL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.5 MB
ENCFF034YUT.bed bed (peaks); assembly: hg19 12.6 KB
ENCFF040XCG.bam bam (alignments); assembly: GRCh38 77.0 MB
ENCFF063UTV.bam bam (alignments); assembly: hg19 170.8 MB
ENCFF078UEL.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF096YYD.fastq fastq (reads) 252.5 MB
ENCFF099LFN.fastq fastq (reads) 107.7 MB
ENCFF134MAW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.3 MB
ENCFF214SLR.fastq fastq (reads) 165.8 MB
ENCFF233ZOI.fastq fastq (reads) 162.7 MB
ENCFF335LFX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.1 MB
ENCFF340BXW.bed bed (peaks); assembly: GRCh38 343.4 KB
ENCFF351ZDU.bed bed (peaks); assembly: GRCh38 12.5 KB
ENCFF385LTB.bam bam (alignments); assembly: GRCh38 165.7 MB
ENCFF428MRF.fastq fastq (reads) 128.7 MB
ENCFF442FCZ.bigBed bigBed (peaks); assembly: GRCh38 690.9 KB
ENCFF460IHR.fastq fastq (reads) 193.6 MB
ENCFF479PRH.bigBed bigBed (peaks); assembly: hg19 698.3 KB
ENCFF502BZV.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF580QMH.fastq fastq (reads) 431.5 MB
ENCFF655JNU.bed bed (peaks); assembly: hg19 659.3 KB
ENCFF692ZBL.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.1 MB
ENCFF723DFF.bam bam (alignments); assembly: hg19 79.9 MB
ENCFF762QRZ.bed bed (peaks); assembly: GRCh38 648.2 KB
ENCFF790KRT.fastq fastq (reads) 329.6 MB
ENCFF817YOC.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.4 MB
ENCFF820YSI.fastq fastq (reads) 446.4 MB
ENCFF844HAH.fastq fastq (reads) 215.9 MB
ENCFF857UXY.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.2 MB
ENCFF925SGC.bed bed (peaks); assembly: hg19 349.0 KB
ENCFF934NAV.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.4 MB
ENCFF991DNF.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.9 MB
ENCSR950WBG ENCSR via encode_api

eCLIP control experiment on K562 against SLBP

Homo sapiens
8 data files
FileTypeSize
ENCFF176IOE.bigWig bigWig (minus strand signal of unique reads) 5.5 MB
ENCFF296EON.fastq fastq (reads) 390.1 MB
ENCFF494AAJ.fastq fastq (reads) 403.8 MB
ENCFF666UVV.bigWig bigWig (minus strand signal of unique reads) 5.4 MB
ENCFF836ZSE.bigWig bigWig (plus strand signal of unique reads) 5.6 MB
ENCFF879UID.bam bam (alignments) 107.0 MB
ENCFF913HKF.bam bam (alignments) 105.9 MB
ENCFF986NDL.bigWig bigWig (plus strand signal of unique reads) 5.7 MB
ENCSR387OVO ENCSR via encode_api

eCLIP control experiment on HepG2 against UTP18

Homo sapiens
8 data files
FileTypeSize
ENCFF180MCF.bam bam (alignments); assembly: hg19 558.3 MB
ENCFF247XNY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 25.2 MB
ENCFF444SAJ.bam bam (alignments); assembly: GRCh38 566.4 MB
ENCFF490XSK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 25.6 MB
ENCFF645ZNB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 25.8 MB
ENCFF656NYK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 26.0 MB
ENCFF811ZGE.fastq fastq (reads) 666.0 MB
ENCFF812WIZ.fastq fastq (reads) 621.0 MB
ENCSR819XBT ENCSR via encode_api

eCLIP experiment on K562 against AATF

Homo sapiens
26 data files
FileTypeSize
ENCFF009KOU.bigBed bigBed (peaks); assembly: hg19 680.4 KB
ENCFF057BVQ.fastq fastq (reads) 604.2 MB
ENCFF116CFF.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF123JMS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.8 MB
ENCFF197MAL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.7 MB
ENCFF228NKX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.4 MB
ENCFF268XIQ.fastq fastq (reads) 651.8 MB
ENCFF349HTU.bed bed (peaks); assembly: GRCh38 315.9 KB
ENCFF370NUA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.7 MB
ENCFF372WIF.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.5 MB
ENCFF415HBM.bed bed (peaks); assembly: hg19 332.1 KB
ENCFF473EVT.bam bam (alignments); assembly: GRCh38 150.9 MB
ENCFF514KIW.bed bed (peaks); assembly: hg19 24.5 KB
ENCFF635KBS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 9.5 MB
ENCFF645UGJ.bam bam (alignments); assembly: GRCh38 87.6 MB
ENCFF647ZMG.fastq fastq (reads) 717.1 MB
ENCFF681TZF.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.3 MB
ENCFF715LDJ.bed bed (peaks); assembly: hg19 606.4 KB
ENCFF745OPH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 7.0 MB
ENCFF783AKB.bam bam (alignments); assembly: hg19 93.0 MB
ENCFF906MGJ.bam bam (alignments); assembly: hg19 157.3 MB
ENCFF931DET.bed bed (peaks); assembly: GRCh38 585.9 KB
ENCFF955LYD.bed bed (peaks); assembly: GRCh38 24.9 KB
ENCFF969VIX.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF978PBJ.bigBed bigBed (peaks); assembly: GRCh38 651.9 KB
ENCFF990ZCZ.fastq fastq (reads) 663.6 MB
ENCSR862QCH ENCSR via encode_api

eCLIP experiment on K562 against U2AF1

Homo sapiens
36 data files
FileTypeSize
ENCFF007KJO.bed bed (peaks) 535.0 KB
ENCFF129MRQ.bigBed bigBed (peaks) 2.0 MB
ENCFF132PVT.bam bam (alignments) 127.7 MB
ENCFF160QIG.bigBed bigBed (peaks) 1.0 MB
ENCFF163SWW.bed bed (peaks) 27.3 KB
ENCFF163SZQ.bigBed bigBed (peaks) 1.5 MB
ENCFF164HBW.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCFF208AKL.fastq fastq (reads) 243.9 MB
ENCFF259XOH.bed bed (peaks) 692.6 KB
ENCFF262KAI.bigWig bigWig (minus strand signal of unique reads) 12.6 MB
ENCFF314SWS.bam bam (alignments) 185.2 MB
ENCFF331EAF.bigBed bigBed (peaks) 1.5 MB
ENCFF346WCF.bigBed bigBed (peaks) 2.7 MB
ENCFF362OME.bigWig bigWig (minus strand signal of unique reads) 7.0 MB
ENCFF362XUO.bed bed (peaks) 1.2 MB
ENCFF364VVL.bigWig bigWig (plus strand signal of unique reads) 9.6 MB
ENCFF367JCV.bam bam (alignments) 129.1 MB
ENCFF420SMK.bigBed bigBed (peaks) 2.1 MB
ENCFF425GCF.bam bam (alignments) 187.1 MB
ENCFF459QRI.bigBed bigBed (peaks) 498.2 KB
ENCFF468LUS.bed bed (peaks) 865.9 KB
ENCFF483ODR.bed bed (peaks) 867.1 KB
ENCFF555DWV.bed bed (peaks) 1.2 MB
ENCFF584WFG.bed bed (peaks) 263.3 KB
ENCFF607AXF.bigWig bigWig (plus strand signal of unique reads) 13.1 MB
ENCFF612ERE.bigBed bigBed (peaks) 1.3 MB
ENCFF640IHY.bed bed (peaks) 27.3 KB
ENCFF663SQD.fastq fastq (reads) 298.5 MB
ENCFF672OHA.bigWig bigWig (minus strand signal of unique reads) 12.7 MB
ENCFF818OSI.fastq fastq (reads) 233.0 MB
ENCFF822MGE.bigWig bigWig (minus strand signal of unique reads) 7.0 MB
ENCFF840LLJ.bed bed (peaks) 203.5 KB
ENCFF856BKY.bigBed bigBed (peaks) 2.0 MB
ENCFF857TTP.bigBed bigBed (peaks) 615.2 KB
ENCFF936MBM.fastq fastq (reads) 288.1 MB
ENCFF939EXV.bigWig bigWig (plus strand signal of unique reads) 9.5 MB
ENCSR893RAV ENCSR via encode_api

eCLIP experiment on K562 against U2AF2

Homo sapiens
36 data files
FileTypeSize
ENCFF009ERS.bed bed (peaks) 491.0 KB
ENCFF024JFG.bigWig bigWig (plus strand signal of unique reads) 19.6 MB
ENCFF077GTP.bigBed bigBed (peaks) 810.5 KB
ENCFF092WRE.bam bam (alignments) 315.2 MB
ENCFF107LLL.bigBed bigBed (peaks) 3.6 MB
ENCFF129DJK.bed bed (peaks) 385.9 KB
ENCFF133QAR.bigBed bigBed (peaks) 4.9 MB
ENCFF182HYE.bed bed (peaks) 1.8 MB
ENCFF270BLT.fastq fastq (reads) 358.5 MB
ENCFF290DFO.bed bed (peaks) 86.4 KB
ENCFF320NIV.bigBed bigBed (peaks) 2.0 MB
ENCFF326LAQ.bed bed (peaks) 1.2 MB
ENCFF331AFC.bed bed (peaks) 86.4 KB
ENCFF398AHG.bigWig bigWig (plus strand signal of unique reads) 26.9 MB
ENCFF405ETO.bed bed (peaks) 2.5 MB
ENCFF430RTZ.bed bed (peaks) 1.8 MB
ENCFF436ZNF.bigWig bigWig (minus strand signal of unique reads) 26.0 MB
ENCFF454FEB.bed bed (peaks) 2.5 MB
ENCFF524JHH.bigWig bigWig (plus strand signal of unique reads) 26.7 MB
ENCFF557WJG.bed bed (peaks) 949.9 KB
ENCFF567UMG.fastq fastq (reads) 299.9 MB
ENCFF573ZFK.bigWig bigWig (minus strand signal of unique reads) 19.0 MB
ENCFF636MAJ.bigBed bigBed (peaks) 4.9 MB
ENCFF669QIT.bigBed bigBed (peaks) 3.5 MB
ENCFF670MPL.bigBed bigBed (peaks) 3.6 MB
ENCFF675UIB.bigBed bigBed (peaks) 4.4 MB
ENCFF708UWK.fastq fastq (reads) 367.8 MB
ENCFF712LBW.bigWig bigWig (minus strand signal of unique reads) 25.8 MB
ENCFF765TAB.bigWig bigWig (minus strand signal of unique reads) 18.9 MB
ENCFF783DTX.bam bam (alignments) 456.2 MB
ENCFF832WSD.bigBed bigBed (peaks) 1.7 MB
ENCFF835KXL.bam bam (alignments) 311.7 MB
ENCFF886IXX.fastq fastq (reads) 307.9 MB
ENCFF936JSP.bam bam (alignments) 451.7 MB
ENCFF984WEQ.bigBed bigBed (peaks) 997.7 KB
ENCFF996ZIG.bigWig bigWig (plus strand signal of unique reads) 19.7 MB
ENCSR584TCR ENCSR via encode_api

eCLIP experiment on K562 against TDP43

Homo sapiens
36 data files
FileTypeSize
ENCFF022DCK.bigBed bigBed (peaks); assembly: GRCh38 1.6 MB
ENCFF037TVC.bed bed (peaks); assembly: GRCh38 148.7 KB
ENCFF118WWO.bigBed bigBed (peaks); assembly: GRCh38 2.1 MB
ENCFF147JYD.fastq fastq (reads) 200.7 MB
ENCFF195CIQ.bigBed bigBed (peaks); assembly: GRCh38 715.0 KB
ENCFF218BOC.fastq fastq (reads) 254.6 MB
ENCFF242QQJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.4 MB
ENCFF259NLI.bed bed (peaks); assembly: hg19 145.3 KB
ENCFF281ELS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.5 MB
ENCFF333KPU.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF392HLM.bigBed bigBed (peaks); assembly: hg19 2.1 MB
ENCFF393WWU.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF435YMY.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.6 MB
ENCFF450IVA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.9 MB
ENCFF453YOD.bam bam (alignments); assembly: hg19 190.7 MB
ENCFF489VNW.bed bed (peaks); assembly: hg19 721.7 KB
ENCFF524PYO.bam bam (alignments); assembly: GRCh38 249.5 MB
ENCFF565CEU.bam bam (alignments); assembly: hg19 252.1 MB
ENCFF569LQN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.8 MB
ENCFF591LPY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.1 MB
ENCFF606RXB.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF619APF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.7 MB
ENCFF653KZU.bigBed bigBed (peaks); assembly: GRCh38 484.8 KB
ENCFF661TYX.fastq fastq (reads) 225.0 MB
ENCFF669TNM.bed bed (peaks); assembly: GRCh38 944.0 KB
ENCFF674IET.bigBed bigBed (peaks); assembly: hg19 2.3 MB
ENCFF697CMV.bed bed (peaks); assembly: hg19 938.8 KB
ENCFF706TWA.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF728SNB.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF734UEC.fastq fastq (reads) 178.5 MB
ENCFF781KGR.bed bed (peaks); assembly: GRCh38 310.1 KB
ENCFF785PDJ.bed bed (peaks); assembly: hg19 574.0 KB
ENCFF869RDN.bigBed bigBed (peaks); assembly: hg19 2.8 MB
ENCFF916MCG.bed bed (peaks); assembly: GRCh38 244.8 KB
ENCFF923ZPC.bam bam (alignments); assembly: GRCh38 189.0 MB
ENCFF979RKC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.0 MB
ENCSR820DQJ ENCSR via encode_api

eCLIP experiment on HepG2 against NOL12

Homo sapiens
36 data files
FileTypeSize
ENCFF009PAA.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.1 MB
ENCFF038OXX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.0 MB
ENCFF047PZR.bed bed (peaks); assembly: hg19 7.2 KB
ENCFF078UAE.bed bed (peaks); assembly: GRCh38 147.3 KB
ENCFF087FYK.bed bed (peaks); assembly: GRCh38 890.7 KB
ENCFF107XVX.bigBed bigBed (peaks); assembly: GRCh38 420.5 KB
ENCFF134IIH.bam bam (alignments); assembly: GRCh38 99.6 MB
ENCFF160ZHG.bam bam (alignments); assembly: hg19 105.7 MB
ENCFF241ABH.fastq fastq (reads) 593.3 MB
ENCFF306ZNQ.bed bed (peaks); assembly: hg19 437.9 KB
ENCFF325BSW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.9 MB
ENCFF333DNO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 8.7 MB
ENCFF378YBS.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF429WKY.bigBed bigBed (peaks); assembly: GRCh38 391.7 KB
ENCFF483TJU.fastq fastq (reads) 565.9 MB
ENCFF506LVL.bed bed (peaks); assembly: GRCh38 517.4 KB
ENCFF515WRY.bed bed (peaks); assembly: hg19 540.5 KB
ENCFF532KFY.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.3 MB
ENCFF585HPQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 8.9 MB
ENCFF589NWW.bigBed bigBed (peaks); assembly: GRCh38 974.8 KB
ENCFF694CAN.bigBed bigBed (peaks); assembly: hg19 1021.5 KB
ENCFF716SCR.bed bed (peaks); assembly: hg19 916.3 KB
ENCFF722JFH.bam bam (alignments); assembly: GRCh38 186.9 MB
ENCFF746WOI.bed bed (peaks); assembly: GRCh38 161.4 KB
ENCFF765OCP.fastq fastq (reads) 610.4 MB
ENCFF808JBC.bigBed bigBed (peaks); assembly: hg19 861.1 KB
ENCFF814JGB.bigBed bigBed (peaks); assembly: hg19 1018.8 KB
ENCFF817NNY.bigBed bigBed (peaks); assembly: GRCh38 1.6 MB
ENCFF821NNN.bam bam (alignments); assembly: hg19 193.6 MB
ENCFF833LUK.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF900ABY.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 8.5 MB
ENCFF906PLZ.fastq fastq (reads) 637.0 MB
ENCFF914WFQ.bed bed (peaks); assembly: GRCh38 7.0 KB
ENCFF920OZH.bed bed (peaks); assembly: hg19 527.3 KB
ENCFF927YPS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.5 MB
ENCFF957MPZ.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCSR352STY ENCSR via encode_api

eCLIP experiment on HepG2 against SSB

Homo sapiens
26 data files
FileTypeSize
ENCFF073JBT.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.6 MB
ENCFF079NYX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 20.6 MB
ENCFF097KHT.bed bed (peaks); assembly: GRCh38 1.0 MB
ENCFF120ZCK.fastq fastq (reads) 1.2 GB
ENCFF242WIV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 19.9 MB
ENCFF264DBW.bam bam (alignments); assembly: GRCh38 517.1 MB
ENCFF329OZW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.4 MB
ENCFF343FAD.bam bam (alignments); assembly: GRCh38 417.4 MB
ENCFF383JPP.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 16.3 MB
ENCFF432KDL.fastq fastq (reads) 1.3 GB
ENCFF527CYH.fastq fastq (reads) 974.0 MB
ENCFF565RQI.bed bed (peaks); assembly: hg19 2.3 KB
ENCFF571EFF.bigBed bigBed (peaks); assembly: hg19 1.5 MB
ENCFF575EPO.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 21.2 MB
ENCFF681BGR.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 16.0 MB
ENCFF689JPE.bigBed bigBed (peaks); assembly: GRCh38 1.8 MB
ENCFF697NZQ.bed bed (peaks); assembly: GRCh38 851.9 KB
ENCFF746AWW.bam bam (alignments); assembly: hg19 541.8 MB
ENCFF746RLH.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF763VGI.bigBed bigBed (peaks); assembly: hg19 1.8 MB
ENCFF828WCR.bed bed (peaks); assembly: hg19 869.4 KB
ENCFF848JWA.bed bed (peaks); assembly: GRCh38 2.3 KB
ENCFF856EEK.bam bam (alignments); assembly: hg19 442.0 MB
ENCFF889CTF.bigBed bigBed (peaks); assembly: GRCh38 1.5 MB
ENCFF916XEL.fastq fastq (reads) 1.1 GB
ENCFF934BKN.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 16.7 MB
ENCSR356MSW ENCSR via encode_api

eCLIP experiment on K562 against SSB

Homo sapiens
26 data files
FileTypeSize
ENCFF022SQB.bam bam (alignments); assembly: hg19 185.1 MB
ENCFF118XXW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.6 MB
ENCFF131CHH.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.6 MB
ENCFF203AWR.bed bed (peaks); assembly: GRCh38 95.9 KB
ENCFF205JFL.bam bam (alignments); assembly: GRCh38 156.6 MB
ENCFF258RPS.fastq fastq (reads) 419.0 MB
ENCFF289TDT.bigBed bigBed (peaks); assembly: hg19 221.3 KB
ENCFF324PNB.bed bed (peaks); assembly: hg19 4.2 KB
ENCFF328KJW.bed bed (peaks); assembly: GRCh38 4.7 KB
ENCFF342RHD.bed bed (peaks); assembly: GRCh38 94.9 KB
ENCFF411IAE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.5 MB
ENCFF464BIY.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.8 MB
ENCFF468FTA.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.7 MB
ENCFF516BAM.bigBed bigBed (peaks); assembly: hg19 216.3 KB
ENCFF566TDO.bam bam (alignments); assembly: GRCh38 177.0 MB
ENCFF623ASO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.4 MB
ENCFF659FQL.bam bam (alignments); assembly: hg19 161.2 MB
ENCFF676BHH.fastq fastq (reads) 489.2 MB
ENCFF677KYJ.fastq fastq (reads) 504.3 MB
ENCFF704NUD.bed bed (peaks); assembly: hg19 101.5 KB
ENCFF732TUI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.6 MB
ENCFF734LCT.fastq fastq (reads) 414.5 MB
ENCFF805UMW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.9 MB
ENCFF868DYD.bigBed bigBed (peaks); assembly: GRCh38 212.0 KB
ENCFF871PJK.bed bed (peaks); assembly: hg19 99.0 KB
ENCFF903AED.bigBed bigBed (peaks); assembly: GRCh38 214.9 KB
ENCSR038JME ENCSR via encode_api

eCLIP experiment on K562 against WRN

Homo sapiens
26 data files
FileTypeSize
ENCFF109LYL.bed bed (peaks); assembly: hg19 605.4 KB
ENCFF128BXK.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF137XEJ.fastq fastq (reads) 362.9 MB
ENCFF138IUK.bed bed (peaks); assembly: hg19 569.1 KB
ENCFF208NTO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.8 MB
ENCFF254ATY.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF264AQP.bam bam (alignments); assembly: hg19 108.3 MB
ENCFF269MTH.bigBed bigBed (peaks); assembly: GRCh38 1.2 MB
ENCFF289NNH.bed bed (peaks); assembly: GRCh38 607.6 KB
ENCFF318MEI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.6 MB
ENCFF351RZD.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF379ORN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.9 MB
ENCFF404HHM.bed bed (peaks); assembly: GRCh38 3.0 KB
ENCFF480XQJ.bam bam (alignments); assembly: hg19 80.2 MB
ENCFF494TID.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.7 MB
ENCFF526BOW.bam bam (alignments); assembly: GRCh38 106.3 MB
ENCFF548GPO.fastq fastq (reads) 301.4 MB
ENCFF553UKA.fastq fastq (reads) 378.1 MB
ENCFF556SMF.bed bed (peaks); assembly: GRCh38 566.1 KB
ENCFF632GZB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.0 MB
ENCFF673VLP.fastq fastq (reads) 317.5 MB
ENCFF773BDV.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.9 MB
ENCFF838CRT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.0 MB
ENCFF901PRL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.6 MB
ENCFF938JQE.bed bed (peaks); assembly: hg19 3.2 KB
ENCFF945HNC.bam bam (alignments); assembly: GRCh38 79.0 MB
ENCSR128BUO ENCSR via encode_api

eCLIP control experiment on HepG2 against BCLAF1

Homo sapiens
8 data files
FileTypeSize
ENCFF096GCS.fastq fastq (reads) 1.1 GB
ENCFF173AOK.fastq fastq (reads) 1.0 GB
ENCFF291XOO.bam bam (alignments); assembly: hg19 983.6 MB
ENCFF504TLC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 44.4 MB
ENCFF582QMI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 44.7 MB
ENCFF660KZN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 43.2 MB
ENCFF777TFC.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 43.9 MB
ENCFF894HGK.bam bam (alignments); assembly: GRCh38 1000.5 MB
ENCSR145NLR ENCSR via encode_api

eCLIP experiment on K562 against DDX51

Homo sapiens
26 data files
FileTypeSize
ENCFF042FAB.bed bed (peaks); assembly: hg19 586.9 KB
ENCFF072MQR.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.2 MB
ENCFF100CNX.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.9 MB
ENCFF143MWR.fastq fastq (reads) 526.6 MB
ENCFF146YPF.bed bed (peaks); assembly: hg19 10.9 KB
ENCFF230UVW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.8 MB
ENCFF258EAW.fastq fastq (reads) 626.8 MB
ENCFF286QNA.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.5 MB
ENCFF323COR.bigBed bigBed (peaks); assembly: GRCh38 1.0 MB
ENCFF402STK.fastq fastq (reads) 578.5 MB
ENCFF420FBX.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF421HDU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.8 MB
ENCFF447BHR.fastq fastq (reads) 492.7 MB
ENCFF475ZZT.bed bed (peaks); assembly: hg19 697.6 KB
ENCFF486XDM.bam bam (alignments); assembly: GRCh38 104.7 MB
ENCFF536UEG.bam bam (alignments); assembly: hg19 139.3 MB
ENCFF563HWS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.4 MB
ENCFF582OJZ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.4 MB
ENCFF584CZB.bed bed (peaks); assembly: GRCh38 555.7 KB
ENCFF633XON.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.5 MB
ENCFF799ERK.bed bed (peaks); assembly: GRCh38 10.3 KB
ENCFF827UJU.bigBed bigBed (peaks); assembly: GRCh38 1.2 MB
ENCFF924PFV.bam bam (alignments); assembly: hg19 111.3 MB
ENCFF931ZGZ.bam bam (alignments); assembly: GRCh38 135.7 MB
ENCFF965UZI.bed bed (peaks); assembly: GRCh38 684.7 KB
ENCFF998TMB.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCSR624CUX ENCSR via encode_api

eCLIP control experiment on HepG2 against ZNF800

Homo sapiens
8 data files
FileTypeSize
ENCFF045KYM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 19.7 MB
ENCFF069BLG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 20.0 MB
ENCFF356RSL.fastq fastq (reads) 528.5 MB
ENCFF362SXF.fastq fastq (reads) 514.2 MB
ENCFF653PSU.bam bam (alignments); assembly: GRCh38 366.8 MB
ENCFF719QDV.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 19.7 MB
ENCFF918MJA.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 19.4 MB
ENCFF966FGY.bam bam (alignments); assembly: hg19 362.2 MB
ENCSR680HYD ENCSR via encode_api

eCLIP control experiment on K562 against SSB

Homo sapiens
8 data files
FileTypeSize
ENCFF453TEC.bam bam (alignments); assembly: GRCh38 189.9 MB
ENCFF528MBL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.3 MB
ENCFF642QNB.fastq fastq (reads) 706.3 MB
ENCFF662VUV.bam bam (alignments); assembly: hg19 186.8 MB
ENCFF738ICV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.2 MB
ENCFF827HWK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.4 MB
ENCFF830PVF.fastq fastq (reads) 664.9 MB
ENCFF962JWZ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.1 MB
ENCSR001KKZ ENCSR via encode_api

eCLIP experiment on K562 against PHF6

Homo sapiens
26 data files
FileTypeSize
ENCFF016IHL.bed bed (peaks); assembly: hg19 489.1 KB
ENCFF042XJN.fastq fastq (reads) 660.3 MB
ENCFF075JQB.bed bed (peaks); assembly: GRCh38 395.1 KB
ENCFF097AME.bigBed bigBed (peaks); assembly: GRCh38 895.2 KB
ENCFF153JFX.bam bam (alignments); assembly: hg19 94.6 MB
ENCFF165KAR.fastq fastq (reads) 613.4 MB
ENCFF213NMK.bam bam (alignments); assembly: hg19 114.4 MB
ENCFF264YFE.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.3 MB
ENCFF282OCB.bam bam (alignments); assembly: GRCh38 111.6 MB
ENCFF396TZQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.0 MB
ENCFF461CTN.fastq fastq (reads) 604.0 MB
ENCFF471BTA.bigBed bigBed (peaks); assembly: hg19 813.5 KB
ENCFF543URO.bigBed bigBed (peaks); assembly: GRCh38 773.8 KB
ENCFF546FDP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.7 MB
ENCFF550QJJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.8 MB
ENCFF588ITW.bed bed (peaks); assembly: GRCh38 15.7 KB
ENCFF631PTI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.6 MB
ENCFF667OVG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.7 MB
ENCFF719WMB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.5 MB
ENCFF877HWY.fastq fastq (reads) 642.0 MB
ENCFF885ZMH.bam bam (alignments); assembly: GRCh38 89.4 MB
ENCFF941KTS.bigBed bigBed (peaks); assembly: hg19 906.7 KB
ENCFF957JDY.bed bed (peaks); assembly: GRCh38 481.2 KB
ENCFF958EFT.bed bed (peaks); assembly: hg19 15.5 KB
ENCFF967JAT.bed bed (peaks); assembly: hg19 421.0 KB
ENCFF972SRF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.4 MB
ENCSR977OXG ENCSR via encode_api

eCLIP experiment on HepG2 against PRPF4

Homo sapiens
26 data files
FileTypeSize
ENCFF041DDW.fastq fastq (reads) 501.2 MB
ENCFF080HMO.bam bam (alignments); assembly: GRCh38 417.0 MB
ENCFF104NFC.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 25.7 MB
ENCFF224ZJZ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 24.8 MB
ENCFF227EJF.bed bed (peaks); assembly: GRCh38 209.5 KB
ENCFF270OMS.bed bed (peaks); assembly: hg19 2.0 MB
ENCFF292ZPN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 25.4 MB
ENCFF331HUW.bed bed (peaks); assembly: GRCh38 1.7 MB
ENCFF335COJ.bigBed bigBed (peaks); assembly: GRCh38 4.0 MB
ENCFF344HRR.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 25.1 MB
ENCFF383UPL.bed bed (peaks); assembly: hg19 1.8 MB
ENCFF394GOQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 19.1 MB
ENCFF397TFH.fastq fastq (reads) 447.8 MB
ENCFF404WOP.bam bam (alignments); assembly: GRCh38 580.2 MB
ENCFF464UMO.bigBed bigBed (peaks); assembly: GRCh38 3.5 MB
ENCFF485KCC.bed bed (peaks); assembly: hg19 207.5 KB
ENCFF535IJL.bigBed bigBed (peaks); assembly: hg19 3.5 MB
ENCFF541DXC.fastq fastq (reads) 441.4 MB
ENCFF601DRB.fastq fastq (reads) 392.1 MB
ENCFF686FQE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 19.8 MB
ENCFF690QDN.bam bam (alignments); assembly: hg19 585.2 MB
ENCFF700QBU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 20.5 MB
ENCFF714PLV.bam bam (alignments); assembly: hg19 433.8 MB
ENCFF727YRW.bigBed bigBed (peaks); assembly: hg19 4.0 MB
ENCFF748DMH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 19.8 MB
ENCFF882APR.bed bed (peaks); assembly: GRCh38 2.0 MB
ENCSR484LAB ENCSR via encode_api

eCLIP experiment on K562 against SAFB

Homo sapiens
26 data files
FileTypeSize
ENCFF067WCL.bed bed (peaks); assembly: GRCh38 2.3 MB
ENCFF127IJD.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 37.7 MB
ENCFF198ESK.fastq fastq (reads) 524.8 MB
ENCFF247JMS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 37.7 MB
ENCFF251LGV.bam bam (alignments); assembly: hg19 829.0 MB
ENCFF397KME.bigBed bigBed (peaks); assembly: GRCh38 3.4 MB
ENCFF407GVQ.bed bed (peaks); assembly: hg19 2.2 MB
ENCFF417KUY.bed bed (peaks); assembly: GRCh38 2.2 MB
ENCFF484YDH.fastq fastq (reads) 527.2 MB
ENCFF514SFZ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 37.1 MB
ENCFF607DEZ.fastq fastq (reads) 540.5 MB
ENCFF639MAG.bed bed (peaks); assembly: hg19 2.3 MB
ENCFF662PGM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 35.9 MB
ENCFF686FKT.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 35.7 MB
ENCFF722JMT.bam bam (alignments); assembly: GRCh38 822.0 MB
ENCFF749GVN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 36.4 MB
ENCFF759SQV.bam bam (alignments); assembly: hg19 836.3 MB
ENCFF831IUW.bigBed bigBed (peaks); assembly: hg19 3.3 MB
ENCFF873GYP.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 36.9 MB
ENCFF929GHQ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 37.1 MB
ENCFF934PXE.bed bed (peaks); assembly: hg19 10.9 KB
ENCFF948MKY.bigBed bigBed (peaks); assembly: GRCh38 4.4 MB
ENCFF953WTP.bed bed (peaks); assembly: GRCh38 11.4 KB
ENCFF966QLX.bigBed bigBed (peaks); assembly: hg19 4.4 MB
ENCFF973VXO.bam bam (alignments); assembly: GRCh38 828.6 MB
ENCFF983WHV.fastq fastq (reads) 544.5 MB
ENCSR922WJV ENCSR via encode_api

eCLIP experiment on K562 against PCBP1

Homo sapiens
26 data files
FileTypeSize
ENCFF002VKC.bigBed bigBed (peaks); assembly: GRCh38 753.2 KB
ENCFF010ECT.fastq fastq (reads) 415.5 MB
ENCFF022GSN.bed bed (peaks); assembly: hg19 404.5 KB
ENCFF030CFW.bam bam (alignments); assembly: hg19 93.6 MB
ENCFF041ETC.bam bam (alignments); assembly: GRCh38 88.8 MB
ENCFF121XCN.bed bed (peaks); assembly: GRCh38 451.1 KB
ENCFF175YZC.bam bam (alignments); assembly: hg19 100.8 MB
ENCFF202IKH.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.7 MB
ENCFF205HUD.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.1 MB
ENCFF274AON.bigBed bigBed (peaks); assembly: GRCh38 849.7 KB
ENCFF345TZP.bam bam (alignments); assembly: GRCh38 96.9 MB
ENCFF363NBL.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.6 MB
ENCFF371IVW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.8 MB
ENCFF381ZBA.bed bed (peaks); assembly: hg19 465.8 KB
ENCFF431FMQ.bed bed (peaks); assembly: hg19 48.8 KB
ENCFF466YKR.fastq fastq (reads) 421.4 MB
ENCFF552AOR.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.9 MB
ENCFF600EPX.bigBed bigBed (peaks); assembly: hg19 787.0 KB
ENCFF734ILS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.4 MB
ENCFF754BZY.fastq fastq (reads) 397.4 MB
ENCFF766DUS.bed bed (peaks); assembly: GRCh38 385.3 KB
ENCFF795GKY.fastq fastq (reads) 436.8 MB
ENCFF806XPW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.6 MB
ENCFF868AMF.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.0 MB
ENCFF869FYO.bigBed bigBed (peaks); assembly: hg19 877.6 KB
ENCFF900IOH.bed bed (peaks); assembly: GRCh38 45.3 KB
ENCSR864XNB ENCSR via encode_api

eCLIP control experiment on K562 against DDX52

Homo sapiens
8 data files
FileTypeSize
ENCFF012HBP.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 30.9 MB
ENCFF084BVN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 30.5 MB
ENCFF190PTC.fastq fastq (reads) 730.4 MB
ENCFF301JHF.bam bam (alignments); assembly: hg19 688.9 MB
ENCFF490IQT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 32.4 MB
ENCFF947YWJ.fastq fastq (reads) 794.0 MB
ENCFF953PIV.bam bam (alignments); assembly: GRCh38 697.5 MB
ENCFF956TRM.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 31.7 MB
ENCSR716DGM ENCSR via encode_api

eCLIP control experiment on K562 against ZC3H8

Homo sapiens
8 data files
FileTypeSize
ENCFF279QTB.bam bam (alignments); assembly: hg19 87.3 MB
ENCFF471DDP.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.1 MB
ENCFF472ZEH.fastq fastq (reads) 507.4 MB
ENCFF482CXE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.0 MB
ENCFF661LGO.bam bam (alignments); assembly: GRCh38 88.5 MB
ENCFF827URJ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.8 MB
ENCFF828FUM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.9 MB
ENCFF903ROZ.fastq fastq (reads) 502.2 MB
ENCSR103HDM ENCSR via encode_api

eCLIP control experiment on K562 against PHF6

Homo sapiens
8 data files
FileTypeSize
ENCFF078XOD.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 20.8 MB
ENCFF156XOE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 21.6 MB
ENCFF248EUN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.6 MB
ENCFF278RGL.bam bam (alignments); assembly: GRCh38 454.9 MB
ENCFF427GOR.bam bam (alignments); assembly: hg19 448.8 MB
ENCFF432QNK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 21.3 MB
ENCFF804TGO.fastq fastq (reads) 632.5 MB
ENCFF928TNJ.fastq fastq (reads) 696.6 MB
ENCSR991LWQ ENCSR via encode_api

eCLIP control experiment on HepG2 against DDX52

Homo sapiens
8 data files
FileTypeSize
ENCFF065PGK.fastq fastq (reads) 596.9 MB
ENCFF177VMO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 28.4 MB
ENCFF258COW.fastq fastq (reads) 676.5 MB
ENCFF487DLC.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 28.8 MB
ENCFF662MYI.bam bam (alignments); assembly: GRCh38 560.8 MB
ENCFF929ANB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 29.6 MB
ENCFF943JVS.bam bam (alignments); assembly: hg19 549.6 MB
ENCFF955NVL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 29.2 MB
ENCSR693JWP ENCSR via encode_api

eCLIP experiment on HepG2 against EXOSC5

Homo sapiens
32 data files
FileTypeSize
ENCFF050JGG.fastq fastq (reads) 150.1 MB
ENCFF094VSP.bed bed (peaks); assembly: GRCh38 145.5 KB
ENCFF108FMS.bigBed bigBed (peaks); assembly: GRCh38 801.7 KB
ENCFF120LSF.bed bed (peaks); assembly: hg19 426.6 KB
ENCFF144JVB.bam bam (alignments); assembly: hg19 114.6 MB
ENCFF165IYB.fastq fastq (reads) 159.7 MB
ENCFF173ODI.fastq fastq (reads) 583.9 MB
ENCFF216VBT.bam bam (alignments); assembly: GRCh38 111.3 MB
ENCFF261AZU.fastq fastq (reads) 237.8 MB
ENCFF266WCQ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.5 MB
ENCFF347UPZ.bigBed bigBed (peaks); assembly: GRCh38 370.6 KB
ENCFF353IMQ.bigBed bigBed (peaks); assembly: hg19 815.6 KB
ENCFF360EQG.bed bed (peaks); assembly: hg19 148.3 KB
ENCFF383ASP.fastq fastq (reads) 173.9 MB
ENCFF405ERW.bam bam (alignments); assembly: GRCh38 109.8 MB
ENCFF449CHK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.4 MB
ENCFF458WEG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.7 MB
ENCFF463OVP.bigBed bigBed (peaks); assembly: hg19 377.2 KB
ENCFF507EGU.fastq fastq (reads) 611.0 MB
ENCFF535JNJ.bam bam (alignments); assembly: hg19 116.7 MB
ENCFF578XQC.fastq fastq (reads) 179.0 MB
ENCFF603RJN.fastq fastq (reads) 129.8 MB
ENCFF622OZH.fastq fastq (reads) 122.0 MB
ENCFF719QKB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.5 MB
ENCFF726PXN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.6 MB
ENCFF735QHY.fastq fastq (reads) 244.2 MB
ENCFF799WXY.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.7 MB
ENCFF824WZJ.bed bed (peaks); assembly: GRCh38 419.3 KB
ENCFF862EKD.bed bed (peaks); assembly: GRCh38 16.3 KB
ENCFF873GTO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.4 MB
ENCFF936FCK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.6 MB
ENCFF937QJB.bed bed (peaks); assembly: hg19 16.4 KB
ENCSR958FKZ ENCSR via encode_api

eCLIP experiment on K562 against PABPC4

Homo sapiens
26 data files
FileTypeSize
ENCFF006AVT.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.8 MB
ENCFF047TLS.bam bam (alignments); assembly: hg19 280.6 MB
ENCFF087JUK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.2 MB
ENCFF192JKW.bigBed bigBed (peaks); assembly: GRCh38 1.2 MB
ENCFF363FQC.bigBed bigBed (peaks); assembly: hg19 2.8 MB
ENCFF440SQF.fastq fastq (reads) 346.2 MB
ENCFF446CWO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.0 MB
ENCFF452MJL.bed bed (peaks); assembly: GRCh38 137.5 KB
ENCFF463ZSJ.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF478YTR.fastq fastq (reads) 287.6 MB
ENCFF484RUL.fastq fastq (reads) 284.5 MB
ENCFF513VQU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.1 MB
ENCFF551NSA.bam bam (alignments); assembly: GRCh38 265.3 MB
ENCFF559XNJ.bed bed (peaks); assembly: GRCh38 560.3 KB
ENCFF577BEF.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF652YFU.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.6 MB
ENCFF662IWF.fastq fastq (reads) 341.8 MB
ENCFF692YDC.bam bam (alignments); assembly: GRCh38 60.7 MB
ENCFF707JVN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.0 MB
ENCFF745TLR.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.9 MB
ENCFF772SPP.bed bed (peaks); assembly: hg19 565.4 KB
ENCFF778LEH.bigBed bigBed (peaks); assembly: GRCh38 2.8 MB
ENCFF787HQF.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF953EUQ.bam bam (alignments); assembly: hg19 62.3 MB
ENCFF956PEQ.bed bed (peaks); assembly: hg19 139.6 KB
ENCFF990TDV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.3 MB
ENCSR089BXO ENCSR via encode_api

eCLIP experiment on K562 against ABCF1

Homo sapiens
26 data files
FileTypeSize
ENCFF010PPR.bigBed bigBed (peaks); assembly: GRCh38 518.2 KB
ENCFF070VGS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.4 MB
ENCFF087VMD.fastq fastq (reads) 462.6 MB
ENCFF090YWS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.6 MB
ENCFF203DRR.bam bam (alignments); assembly: hg19 68.6 MB
ENCFF212LWQ.fastq fastq (reads) 529.7 MB
ENCFF241MTQ.fastq fastq (reads) 450.7 MB
ENCFF300YSV.bed bed (peaks); assembly: GRCh38 236.5 KB
ENCFF307DZF.bigBed bigBed (peaks); assembly: hg19 433.7 KB
ENCFF332BZR.bed bed (peaks); assembly: hg19 247.4 KB
ENCFF361IIP.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.6 MB
ENCFF376NBT.bed bed (peaks); assembly: hg19 191.2 KB
ENCFF414SIN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.2 MB
ENCFF424BDA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.7 MB
ENCFF470BUE.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.5 MB
ENCFF489WZV.bed bed (peaks); assembly: GRCh38 183.6 KB
ENCFF504NOI.bigBed bigBed (peaks); assembly: GRCh38 421.2 KB
ENCFF521WPY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.3 MB
ENCFF761ZBZ.bigBed bigBed (peaks); assembly: hg19 540.2 KB
ENCFF781LAN.fastq fastq (reads) 520.6 MB
ENCFF811EXB.bam bam (alignments); assembly: GRCh38 64.2 MB
ENCFF832LUT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.5 MB
ENCFF906OCW.bam bam (alignments); assembly: hg19 48.1 MB
ENCFF929AVT.bed bed (peaks); assembly: hg19 1.7 KB
ENCFF941GJK.bed bed (peaks); assembly: GRCh38 1.5 KB
ENCFF983ABI.bam bam (alignments); assembly: GRCh38 45.8 MB
ENCSR685AUR ENCSR via encode_api

eCLIP experiment on HepG2 against ZNF800

Homo sapiens
26 data files
FileTypeSize
ENCFF038BAZ.bed bed (peaks); assembly: hg19 961.4 KB
ENCFF038GCY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.9 MB
ENCFF065FPQ.bigBed bigBed (peaks); assembly: GRCh38 2.6 MB
ENCFF160MKE.fastq fastq (reads) 573.2 MB
ENCFF195YQM.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF234RUT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.0 MB
ENCFF248VYV.bam bam (alignments); assembly: hg19 266.6 MB
ENCFF265GOS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.1 MB
ENCFF265GVT.bam bam (alignments); assembly: GRCh38 261.6 MB
ENCFF277XGO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.5 MB
ENCFF304CIP.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.3 MB
ENCFF343DKZ.fastq fastq (reads) 600.1 MB
ENCFF343TCO.bed bed (peaks); assembly: GRCh38 67.3 KB
ENCFF348GPW.fastq fastq (reads) 349.2 MB
ENCFF474PGR.bam bam (alignments); assembly: GRCh38 182.4 MB
ENCFF482ADJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.9 MB
ENCFF506YVW.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF558IAO.bigBed bigBed (peaks); assembly: hg19 2.6 MB
ENCFF629DDP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.6 MB
ENCFF643WBT.bam bam (alignments); assembly: hg19 185.7 MB
ENCFF660MWG.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF712CBF.bed bed (peaks); assembly: GRCh38 962.5 KB
ENCFF793EJK.bed bed (peaks); assembly: hg19 66.1 KB
ENCFF862VYQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.8 MB
ENCFF959DLJ.fastq fastq (reads) 364.7 MB
ENCFF968QPW.bigBed bigBed (peaks); assembly: GRCh38 1.6 MB
ENCSR050BDZ ENCSR via encode_api

eCLIP experiment on HepG2 against SDAD1

Homo sapiens
26 data files
FileTypeSize
ENCFF004ZSD.bam bam (alignments); assembly: hg19 97.7 MB
ENCFF060SCU.bigBed bigBed (peaks); assembly: GRCh38 1.0 MB
ENCFF075XTM.bed bed (peaks); assembly: hg19 21.7 KB
ENCFF079MBG.bam bam (alignments); assembly: GRCh38 97.1 MB
ENCFF283KXT.fastq fastq (reads) 540.9 MB
ENCFF325VKM.bed bed (peaks); assembly: hg19 595.1 KB
ENCFF332RVY.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF336IRY.bed bed (peaks); assembly: GRCh38 592.9 KB
ENCFF346NQQ.bam bam (alignments); assembly: GRCh38 105.2 MB
ENCFF355EHK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.2 MB
ENCFF361RSB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.8 MB
ENCFF522VGK.fastq fastq (reads) 555.9 MB
ENCFF625AZU.bigBed bigBed (peaks); assembly: hg19 1.0 MB
ENCFF644PUX.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.7 MB
ENCFF697BPX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.2 MB
ENCFF772OQA.fastq fastq (reads) 526.2 MB
ENCFF789KFH.bed bed (peaks); assembly: GRCh38 569.0 KB
ENCFF825UVD.bed bed (peaks); assembly: GRCh38 22.9 KB
ENCFF830EAE.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.0 MB
ENCFF861PYS.fastq fastq (reads) 537.9 MB
ENCFF875HEP.bam bam (alignments); assembly: hg19 106.0 MB
ENCFF882KLF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.1 MB
ENCFF909ZQB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.8 MB
ENCFF924ZKA.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF943KDD.bed bed (peaks); assembly: hg19 571.6 KB
ENCFF988XDT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.9 MB
ENCSR902XTJ ENCSR via encode_api

eCLIP control experiment on HepG2 against AKAP1

Homo sapiens
8 data files
FileTypeSize
ENCFF008YNL.bam bam (alignments); assembly: hg19 288.2 MB
ENCFF085IJS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.3 MB
ENCFF162VKU.bam bam (alignments); assembly: GRCh38 298.3 MB
ENCFF378CCG.fastq fastq (reads) 342.7 MB
ENCFF605MNI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.0 MB
ENCFF849BXI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.8 MB
ENCFF945MLB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.5 MB
ENCFF956TUZ.fastq fastq (reads) 346.2 MB
ENCSR606BPV ENCSR via encode_api

eCLIP experiment on K562 against AQR

Homo sapiens
26 data files
FileTypeSize
ENCFF053NWA.fastq fastq (reads) 692.7 MB
ENCFF098SCJ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 16.9 MB
ENCFF134ZFX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.7 MB
ENCFF166SON.bigBed bigBed (peaks); assembly: hg19 4.4 MB
ENCFF206SFN.bigBed bigBed (peaks); assembly: GRCh38 4.3 MB
ENCFF235BMH.bam bam (alignments); assembly: hg19 227.8 MB
ENCFF240IEE.bed bed (peaks); assembly: GRCh38 1.6 MB
ENCFF300ZIN.fastq fastq (reads) 451.3 MB
ENCFF325SFV.bed bed (peaks); assembly: hg19 2.3 MB
ENCFF333ERO.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 17.5 MB
ENCFF345VSH.bam bam (alignments); assembly: hg19 353.8 MB
ENCFF363DGM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.2 MB
ENCFF374DAW.bam bam (alignments); assembly: GRCh38 330.3 MB
ENCFF400KYS.bed bed (peaks); assembly: hg19 529.1 KB
ENCFF436KLO.bam bam (alignments); assembly: GRCh38 218.1 MB
ENCFF441OJX.fastq fastq (reads) 730.4 MB
ENCFF461ZQQ.bigBed bigBed (peaks); assembly: hg19 3.2 MB
ENCFF465QKS.bed bed (peaks); assembly: hg19 1.6 MB
ENCFF466DMQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.1 MB
ENCFF499TGS.bigBed bigBed (peaks); assembly: GRCh38 3.2 MB
ENCFF535SIF.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 16.1 MB
ENCFF544NMT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.8 MB
ENCFF573NET.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 16.6 MB
ENCFF620JUD.bed bed (peaks); assembly: GRCh38 2.2 MB
ENCFF761MCX.fastq fastq (reads) 425.3 MB
ENCFF949QGM.bed bed (peaks); assembly: GRCh38 505.0 KB
ENCSR404ABA ENCSR via encode_api

eCLIP control experiment on K562 against WDR43

Homo sapiens
8 data files
FileTypeSize
ENCFF225CKH.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 25.8 MB
ENCFF352VBP.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 26.3 MB
ENCFF407AXQ.fastq fastq (reads) 520.4 MB
ENCFF532CUG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 25.4 MB
ENCFF587TIW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 24.7 MB
ENCFF701CEW.bam bam (alignments); assembly: hg19 501.1 MB
ENCFF855XKN.fastq fastq (reads) 565.4 MB
ENCFF873AEV.bam bam (alignments); assembly: GRCh38 515.8 MB
ENCSR349CMI ENCSR via encode_api

eCLIP experiment on K562 against WDR43

Homo sapiens
26 data files
FileTypeSize
ENCFF048QZQ.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF079JRB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.8 MB
ENCFF083HOA.fastq fastq (reads) 581.9 MB
ENCFF177SNO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.6 MB
ENCFF188RTW.fastq fastq (reads) 568.6 MB
ENCFF213FHW.bed bed (peaks); assembly: GRCh38 387.6 KB
ENCFF238XRJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.8 MB
ENCFF244JER.bed bed (peaks); assembly: GRCh38 3.7 KB
ENCFF275AYL.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF309ZSS.bigBed bigBed (peaks); assembly: hg19 805.7 KB
ENCFF344QPA.bigBed bigBed (peaks); assembly: GRCh38 798.7 KB
ENCFF358QSY.bed bed (peaks); assembly: hg19 3.8 KB
ENCFF380CNM.bam bam (alignments); assembly: hg19 63.4 MB
ENCFF425HAU.bed bed (peaks); assembly: hg19 392.5 KB
ENCFF445DOZ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.0 MB
ENCFF463JRJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.6 MB
ENCFF509FAF.bed bed (peaks); assembly: hg19 615.0 KB
ENCFF522XKE.fastq fastq (reads) 517.8 MB
ENCFF545IBP.bed bed (peaks); assembly: GRCh38 608.5 KB
ENCFF580XQC.bam bam (alignments); assembly: GRCh38 62.1 MB
ENCFF729AVB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.7 MB
ENCFF748FDO.bam bam (alignments); assembly: hg19 117.9 MB
ENCFF810LWT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.0 MB
ENCFF899IIA.fastq fastq (reads) 536.0 MB
ENCFF912BRE.bam bam (alignments); assembly: GRCh38 115.2 MB
ENCFF998NDS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.7 MB
ENCSR343MKJ ENCSR via encode_api

eCLIP control experiment on HepG2 against FTO

Homo sapiens
8 data files
FileTypeSize
ENCFF028JUM.fastq fastq (reads) 360.4 MB
ENCFF062MJR.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.5 MB
ENCFF104YFG.fastq fastq (reads) 378.2 MB
ENCFF214XZG.bam bam (alignments); assembly: GRCh38 243.8 MB
ENCFF310NFE.bam bam (alignments); assembly: hg19 238.3 MB
ENCFF446BUY.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.3 MB
ENCFF480JOW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.6 MB
ENCFF755QRF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.2 MB
ENCSR042RCU ENCSR via encode_api

eCLIP control experiment on HepG2 against UPF1

Homo sapiens
8 data files
FileTypeSize
ENCFF159XFE.fastq fastq (reads) 275.2 MB
ENCFF257MNA.fastq fastq (reads) 263.5 MB
ENCFF457JNW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.9 MB
ENCFF559RCW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.0 MB
ENCFF570JWM.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.8 MB
ENCFF572WFZ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.2 MB
ENCFF639BOG.bam bam (alignments); assembly: hg19 214.6 MB
ENCFF974NJE.bam bam (alignments); assembly: GRCh38 220.3 MB
ENCSR033FWT ENCSR via encode_api

eCLIP control experiment on K562 against WDR3

Homo sapiens
8 data files
FileTypeSize
ENCFF163KJT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 24.6 MB
ENCFF278YVT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 24.1 MB
ENCFF377SJO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 23.3 MB
ENCFF496JTD.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 23.8 MB
ENCFF505OPV.fastq fastq (reads) 582.1 MB
ENCFF639TBT.fastq fastq (reads) 580.9 MB
ENCFF789QMT.bam bam (alignments); assembly: hg19 544.6 MB
ENCFF978VBW.bam bam (alignments); assembly: GRCh38 557.7 MB
ENCSR389ISM ENCSR via encode_api

eCLIP control experiment on K562 against FUS

Homo sapiens
8 data files
FileTypeSize
ENCFF084ZXT.fastq fastq (reads) 716.3 MB
ENCFF117JMQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 14.9 MB
ENCFF128HQK.fastq fastq (reads) 690.0 MB
ENCFF233ZZR.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 15.3 MB
ENCFF447LJU.bam bam (alignments); assembly: GRCh38 361.8 MB
ENCFF481NLU.bam bam (alignments); assembly: hg19 355.4 MB
ENCFF528PWJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 15.0 MB
ENCFF626BAU.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.6 MB
ENCSR361OCV ENCSR via encode_api

eCLIP experiment on HepG2 against NIP7

Homo sapiens
26 data files
FileTypeSize
ENCFF033MGP.bed bed (peaks); assembly: GRCh38 7.4 KB
ENCFF048BEP.bam bam (alignments); assembly: hg19 51.8 MB
ENCFF060MIC.bigBed bigBed (peaks); assembly: GRCh38 489.5 KB
ENCFF068VHN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.3 MB
ENCFF077RVD.bed bed (peaks); assembly: hg19 151.6 KB
ENCFF105OHO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.1 MB
ENCFF122OZU.bigBed bigBed (peaks); assembly: hg19 364.1 KB
ENCFF125GZY.fastq fastq (reads) 658.7 MB
ENCFF134AMO.fastq fastq (reads) 715.0 MB
ENCFF157MHL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.4 MB
ENCFF169ABN.bam bam (alignments); assembly: GRCh38 49.2 MB
ENCFF204THM.bed bed (peaks); assembly: GRCh38 186.3 KB
ENCFF216MCK.bam bam (alignments); assembly: GRCh38 43.8 MB
ENCFF251ZRM.bam bam (alignments); assembly: hg19 45.8 MB
ENCFF260EIZ.fastq fastq (reads) 587.2 MB
ENCFF318WQO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.4 MB
ENCFF427MET.fastq fastq (reads) 640.9 MB
ENCFF474VRK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.2 MB
ENCFF501GXB.bed bed (peaks); assembly: GRCh38 146.7 KB
ENCFF527MFS.bed bed (peaks); assembly: hg19 191.2 KB
ENCFF532HBV.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.4 MB
ENCFF620URI.bigBed bigBed (peaks); assembly: GRCh38 353.9 KB
ENCFF649OFM.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.2 MB
ENCFF677VIX.bigBed bigBed (peaks); assembly: hg19 499.9 KB
ENCFF779WAQ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.2 MB
ENCFF955VYD.bed bed (peaks); assembly: hg19 7.4 KB
ENCSR544UON ENCSR via encode_api

eCLIP control experiment on K562 against AKAP1

Homo sapiens
8 data files
FileTypeSize
ENCFF091PQO.bam bam (alignments); assembly: GRCh38 400.9 MB
ENCFF208EFX.fastq fastq (reads) 684.5 MB
ENCFF296ZFQ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 17.0 MB
ENCFF317MHT.fastq fastq (reads) 717.4 MB
ENCFF447WQT.bam bam (alignments); assembly: hg19 388.3 MB
ENCFF697SEB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 17.5 MB
ENCFF743ICQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 17.7 MB
ENCFF903BUG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 18.2 MB
ENCSR592ESN ENCSR via encode_api

eCLIP control experiment on HepG2 against FXR2

Homo sapiens
8 data files
FileTypeSize
ENCFF052EKD.fastq fastq (reads) 711.3 MB
ENCFF160EHF.fastq fastq (reads) 703.5 MB
ENCFF220WUB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 16.0 MB
ENCFF314ZCB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 16.0 MB
ENCFF716YEB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 15.7 MB
ENCFF867HUI.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 15.7 MB
ENCFF936GTY.bam bam (alignments); assembly: hg19 385.7 MB
ENCFF985TJF.bam bam (alignments); assembly: GRCh38 393.1 MB
ENCSR739VVT ENCSR via encode_api

eCLIP experiment on K562 against APOBEC3C

Homo sapiens
32 data files
FileTypeSize
ENCFF023SPX.fastq fastq (reads) 115.5 MB
ENCFF034NKK.bed bed (peaks); assembly: GRCh38 762.4 KB
ENCFF039MJO.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.1 MB
ENCFF082VYL.fastq fastq (reads) 140.7 MB
ENCFF239THR.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF260KKZ.fastq fastq (reads) 211.7 MB
ENCFF273IBF.bed bed (peaks); assembly: GRCh38 625.8 KB
ENCFF284TAX.bam bam (alignments); assembly: GRCh38 194.2 MB
ENCFF285GQG.fastq fastq (reads) 106.2 MB
ENCFF315EQH.fastq fastq (reads) 352.4 MB
ENCFF315VJK.fastq fastq (reads) 314.2 MB
ENCFF319VBB.bed bed (peaks); assembly: hg19 770.7 KB
ENCFF346VFW.bam bam (alignments); assembly: hg19 105.3 MB
ENCFF379YZG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.7 MB
ENCFF392MTE.fastq fastq (reads) 129.4 MB
ENCFF398XYR.bam bam (alignments); assembly: hg19 199.6 MB
ENCFF430LRB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.7 MB
ENCFF436DAF.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF472CCL.bed bed (peaks); assembly: GRCh38 23.8 KB
ENCFF499WCD.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.8 MB
ENCFF519AJS.bed bed (peaks); assembly: hg19 632.3 KB
ENCFF571IFM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.5 MB
ENCFF655HJD.fastq fastq (reads) 243.7 MB
ENCFF668IXD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.6 MB
ENCFF709WDL.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF713YLQ.fastq fastq (reads) 193.1 MB
ENCFF736YDH.bed bed (peaks); assembly: hg19 23.2 KB
ENCFF774VNR.fastq fastq (reads) 223.9 MB
ENCFF779MXW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.9 MB
ENCFF785OQN.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF921RKR.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.5 MB
ENCFF943EZJ.bam bam (alignments); assembly: GRCh38 103.2 MB
ENCSR464OSH ENCSR via encode_api

eCLIP experiment on HepG2 against FUS

Homo sapiens
26 data files
FileTypeSize
ENCFF014VCG.bam bam (alignments); assembly: hg19 784.7 MB
ENCFF053HVX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 34.9 MB
ENCFF074NHF.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 34.3 MB
ENCFF106CGP.bed bed (peaks); assembly: hg19 2.2 MB
ENCFF144QMK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 30.0 MB
ENCFF161SRN.fastq fastq (reads) 649.1 MB
ENCFF163PLH.bed bed (peaks); assembly: hg19 2.5 MB
ENCFF177YJA.bam bam (alignments); assembly: GRCh38 763.7 MB
ENCFF181DXK.bam bam (alignments); assembly: GRCh38 596.9 MB
ENCFF213CRG.bigBed bigBed (peaks); assembly: GRCh38 4.8 MB
ENCFF264FPV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 27.2 MB
ENCFF311LXM.bam bam (alignments); assembly: hg19 633.6 MB
ENCFF331AAL.fastq fastq (reads) 545.0 MB
ENCFF336WDV.bed bed (peaks); assembly: hg19 16.7 KB
ENCFF400CXS.fastq fastq (reads) 564.0 MB
ENCFF532APU.bigBed bigBed (peaks); assembly: hg19 4.8 MB
ENCFF631GSU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 35.5 MB
ENCFF650QXI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 33.8 MB
ENCFF685MZA.bed bed (peaks); assembly: GRCh38 2.2 MB
ENCFF734UIE.bigBed bigBed (peaks); assembly: GRCh38 4.3 MB
ENCFF785SER.bigBed bigBed (peaks); assembly: hg19 4.4 MB
ENCFF818XWM.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 28.3 MB
ENCFF821CAW.fastq fastq (reads) 631.5 MB
ENCFF919FGD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 28.5 MB
ENCFF951IBI.bed bed (peaks); assembly: GRCh38 2.5 MB
ENCFF972DFZ.bed bed (peaks); assembly: GRCh38 18.4 KB
ENCSR539BEV ENCSR via encode_api

eCLIP experiment on HepG2 against UPF1

Homo sapiens
26 data files
FileTypeSize
ENCFF022DHH.fastq fastq (reads) 295.8 MB
ENCFF050BHJ.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF072CTB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.1 MB
ENCFF072RII.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF101ODP.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 8.8 MB
ENCFF153YEG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 8.9 MB
ENCFF168ORJ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 8.5 MB
ENCFF218EGF.bigBed bigBed (peaks); assembly: GRCh38 1.4 MB
ENCFF242FDW.bed bed (peaks); assembly: hg19 222.8 KB
ENCFF315BLR.bam bam (alignments); assembly: hg19 186.8 MB
ENCFF368XBY.bed bed (peaks); assembly: GRCh38 576.8 KB
ENCFF400GTE.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 8.4 MB
ENCFF429YRX.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.3 MB
ENCFF483STL.bed bed (peaks); assembly: hg19 712.5 KB
ENCFF517FAK.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF528BUU.fastq fastq (reads) 312.7 MB
ENCFF687EQE.bed bed (peaks); assembly: GRCh38 225.7 KB
ENCFF699EEF.bam bam (alignments); assembly: GRCh38 180.7 MB
ENCFF763ZLD.bed bed (peaks); assembly: GRCh38 722.4 KB
ENCFF787DWG.bam bam (alignments); assembly: hg19 253.9 MB
ENCFF811KHK.bam bam (alignments); assembly: GRCh38 246.1 MB
ENCFF848JHB.bed bed (peaks); assembly: hg19 578.3 KB
ENCFF881UQQ.fastq fastq (reads) 287.2 MB
ENCFF943HIX.fastq fastq (reads) 316.7 MB
ENCFF992OTW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.5 MB
ENCFF998KED.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.8 MB
ENCSR906ZJF ENCSR via encode_api

eCLIP experiment on K562 against SDAD1

Homo sapiens
26 data files
FileTypeSize
ENCFF012LSN.fastq fastq (reads) 450.2 MB
ENCFF019OYM.fastq fastq (reads) 506.6 MB
ENCFF062NZX.bigBed bigBed (peaks); assembly: hg19 342.8 KB
ENCFF080UZX.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 1.7 MB
ENCFF113QBT.bam bam (alignments); assembly: GRCh38 32.0 MB
ENCFF114EUH.bed bed (peaks); assembly: GRCh38 1.8 KB
ENCFF150UWL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.1 MB
ENCFF169ZAH.bed bed (peaks); assembly: GRCh38 231.7 KB
ENCFF241KPE.bed bed (peaks); assembly: hg19 1.4 KB
ENCFF262TRZ.bam bam (alignments); assembly: hg19 61.3 MB
ENCFF300LDQ.bigBed bigBed (peaks); assembly: GRCh38 328.5 KB
ENCFF310NJO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 1.8 MB
ENCFF475FOJ.bed bed (peaks); assembly: hg19 240.0 KB
ENCFF478LDY.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.3 MB
ENCFF488IGQ.bigBed bigBed (peaks); assembly: hg19 524.7 KB
ENCFF525ZWJ.bigBed bigBed (peaks); assembly: GRCh38 510.0 KB
ENCFF642DGM.bed bed (peaks); assembly: hg19 124.2 KB
ENCFF646DAJ.fastq fastq (reads) 491.4 MB
ENCFF698ZRC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.0 MB
ENCFF702ZSG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.2 MB
ENCFF856AGT.fastq fastq (reads) 544.0 MB
ENCFF913FPP.bed bed (peaks); assembly: GRCh38 117.1 KB
ENCFF946AMH.bam bam (alignments); assembly: GRCh38 59.4 MB
ENCFF964YXC.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 1.8 MB
ENCFF976VLP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 1.9 MB
ENCFF998XEU.bam bam (alignments); assembly: hg19 33.4 MB
ENCSR367ACZ ENCSR via encode_api

eCLIP control experiment on HepG2 against PRPF4

Homo sapiens
8 data files
FileTypeSize
ENCFF155TML.bam bam (alignments); assembly: GRCh38 341.6 MB
ENCFF300FOD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.8 MB
ENCFF343WLN.fastq fastq (reads) 415.0 MB
ENCFF560IMA.fastq fastq (reads) 412.5 MB
ENCFF603CHX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 15.3 MB
ENCFF698WXG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.1 MB
ENCFF827HXV.bam bam (alignments); assembly: hg19 334.0 MB
ENCFF975WHN.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.9 MB
ENCSR857ORY ENCSR via encode_api

eCLIP control experiment on K562 against ABCF1

Homo sapiens
8 data files
FileTypeSize
ENCFF022GWO.fastq fastq (reads) 619.4 MB
ENCFF039OUK.fastq fastq (reads) 632.7 MB
ENCFF064GXQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.7 MB
ENCFF328HLS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.0 MB
ENCFF499MQV.bam bam (alignments); assembly: GRCh38 257.5 MB
ENCFF568PQW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.6 MB
ENCFF817YCI.bam bam (alignments); assembly: hg19 252.4 MB
ENCFF828ZNL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.2 MB
ENCSR533BNK ENCSR via encode_api

eCLIP control experiment on K562 against CPEB4

Homo sapiens
8 data files
FileTypeSize
ENCFF036BER.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 15.5 MB
ENCFF253LEQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 16.1 MB
ENCFF287VBF.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 16.6 MB
ENCFF296WZS.fastq fastq (reads) 775.3 MB
ENCFF732JDY.fastq fastq (reads) 727.9 MB
ENCFF777AFV.bam bam (alignments); assembly: hg19 364.5 MB
ENCFF790WEA.bam bam (alignments); assembly: GRCh38 377.0 MB
ENCFF804USB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 16.0 MB
ENCSR181NRW ENCSR via encode_api

eCLIP experiment on K562 against ZC3H8

Homo sapiens
26 data files
FileTypeSize
ENCFF011ICS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.4 MB
ENCFF172VCZ.fastq fastq (reads) 674.7 MB
ENCFF207UUG.bed bed (peaks); assembly: hg19 6.8 KB
ENCFF222OHT.fastq fastq (reads) 432.8 MB
ENCFF276YFH.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.6 MB
ENCFF302NJT.bam bam (alignments); assembly: hg19 92.5 MB
ENCFF343YDJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.6 MB
ENCFF361EVD.fastq fastq (reads) 614.6 MB
ENCFF382URH.bed bed (peaks); assembly: GRCh38 6.8 KB
ENCFF397QWI.bigBed bigBed (peaks); assembly: GRCh38 767.2 KB
ENCFF409GUM.bam bam (alignments); assembly: GRCh38 45.0 MB
ENCFF411LMS.fastq fastq (reads) 392.0 MB
ENCFF435DGO.bigBed bigBed (peaks); assembly: hg19 597.1 KB
ENCFF515ATI.bed bed (peaks); assembly: hg19 339.1 KB
ENCFF607HRG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.3 MB
ENCFF627NRS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.7 MB
ENCFF637KIG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.9 MB
ENCFF670VYB.bed bed (peaks); assembly: GRCh38 323.3 KB
ENCFF706LXQ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.7 MB
ENCFF711ATW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.5 MB
ENCFF717DIZ.bam bam (alignments); assembly: hg19 47.7 MB
ENCFF725VLW.bed bed (peaks); assembly: GRCh38 476.9 KB
ENCFF810NKS.bigBed bigBed (peaks); assembly: GRCh38 578.3 KB
ENCFF892SVF.bam bam (alignments); assembly: GRCh38 89.2 MB
ENCFF966TMA.bigBed bigBed (peaks); assembly: hg19 788.1 KB
ENCFF990BSZ.bed bed (peaks); assembly: hg19 495.2 KB
ENCSR046JHH ENCSR via encode_api

eCLIP experiment on K562 against CPEB4

Homo sapiens
26 data files
FileTypeSize
ENCFF038VZO.bam bam (alignments); assembly: GRCh38 74.5 MB
ENCFF075LPL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.1 MB
ENCFF104VMP.bed bed (peaks); assembly: hg19 491.9 KB
ENCFF153CMF.bed bed (peaks); assembly: hg19 5.2 KB
ENCFF161SFX.bam bam (alignments); assembly: hg19 77.6 MB
ENCFF165CFI.bam bam (alignments); assembly: hg19 92.2 MB
ENCFF180DLO.bigBed bigBed (peaks); assembly: hg19 888.3 KB
ENCFF216ENA.bam bam (alignments); assembly: GRCh38 86.3 MB
ENCFF231USX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.4 MB
ENCFF370BLG.bed bed (peaks); assembly: GRCh38 476.2 KB
ENCFF379DBY.bed bed (peaks); assembly: hg19 430.2 KB
ENCFF402FOP.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.0 MB
ENCFF423MRZ.fastq fastq (reads) 361.7 MB
ENCFF445MTV.fastq fastq (reads) 312.2 MB
ENCFF462NKY.bigBed bigBed (peaks); assembly: GRCh38 798.1 KB
ENCFF508FXQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.2 MB
ENCFF655ROH.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.4 MB
ENCFF665BGJ.bed bed (peaks); assembly: GRCh38 4.7 KB
ENCFF684MMZ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.6 MB
ENCFF718OFC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.8 MB
ENCFF764VBB.fastq fastq (reads) 472.7 MB
ENCFF854FIH.fastq fastq (reads) 557.6 MB
ENCFF874CIU.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.9 MB
ENCFF903OOM.bigBed bigBed (peaks); assembly: GRCh38 843.2 KB
ENCFF976VFC.bed bed (peaks); assembly: GRCh38 405.5 KB
ENCFF998YKL.bigBed bigBed (peaks); assembly: hg19 819.2 KB
ENCSR700UGT ENCSR via encode_api

eCLIP control experiment on HepG2 against YBX3

Homo sapiens
8 data files
FileTypeSize
ENCFF101VSR.bam bam (alignments); assembly: GRCh38 283.1 MB
ENCFF111XXV.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.6 MB
ENCFF178VIK.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.2 MB
ENCFF224UCB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.5 MB
ENCFF520IMA.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.4 MB
ENCFF576RGE.bam bam (alignments); assembly: hg19 279.0 MB
ENCFF706KON.fastq fastq (reads) 756.3 MB
ENCFF798TFX.fastq fastq (reads) 817.8 MB
ENCSR192TPA ENCSR via encode_api

eCLIP control experiment on K562 against PABPC4

Homo sapiens
8 data files
FileTypeSize
ENCFF011DYO.bam bam (alignments); assembly: GRCh38 577.4 MB
ENCFF120HRN.bam bam (alignments); assembly: hg19 567.8 MB
ENCFF371WFK.fastq fastq (reads) 622.8 MB
ENCFF576YDY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 25.1 MB
ENCFF611LDZ.fastq fastq (reads) 693.8 MB
ENCFF776NCN.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 25.9 MB
ENCFF861XJK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 25.5 MB
ENCFF976HQN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 26.3 MB
ENCSR721HPX ENCSR via encode_api

eCLIP experiment on HepG2 against G3BP1

Homo sapiens
26 data files
FileTypeSize
ENCFF015CYW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.0 MB
ENCFF042TNT.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.0 MB
ENCFF052VSF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.3 MB
ENCFF065SWB.fastq fastq (reads) 729.4 MB
ENCFF074GKB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 12.1 MB
ENCFF165JYX.bed bed (peaks); assembly: hg19 1.3 MB
ENCFF180AUP.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.6 MB
ENCFF205KCK.bed bed (peaks); assembly: GRCh38 1.3 MB
ENCFF234EDT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.9 MB
ENCFF288LEG.bam bam (alignments); assembly: GRCh38 292.3 MB
ENCFF340DMM.bam bam (alignments); assembly: hg19 304.4 MB
ENCFF342WGS.fastq fastq (reads) 558.1 MB
ENCFF395MJO.bam bam (alignments); assembly: GRCh38 235.9 MB
ENCFF482DGA.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.4 MB
ENCFF486NTL.fastq fastq (reads) 640.4 MB
ENCFF506GKX.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF557CZU.fastq fastq (reads) 500.3 MB
ENCFF564AEK.bam bam (alignments); assembly: hg19 249.0 MB
ENCFF575JDL.bigBed bigBed (peaks); assembly: hg19 2.4 MB
ENCFF705PQT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.5 MB
ENCFF751SPV.bigBed bigBed (peaks); assembly: GRCh38 2.4 MB
ENCFF792NCE.bigBed bigBed (peaks); assembly: hg19 2.6 MB
ENCFF899HHP.bed bed (peaks); assembly: GRCh38 143.6 KB
ENCFF900DXH.bigBed bigBed (peaks); assembly: GRCh38 2.6 MB
ENCFF934JFZ.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF963CVD.bed bed (peaks); assembly: hg19 145.2 KB
ENCSR177QQY ENCSR via encode_api

eCLIP experiment on K562 against AKAP1

Homo sapiens
26 data files
FileTypeSize
ENCFF010IOJ.bed bed (peaks); assembly: GRCh38 766.9 KB
ENCFF013IBR.fastq fastq (reads) 387.8 MB
ENCFF016YOC.bam bam (alignments); assembly: GRCh38 94.4 MB
ENCFF033EFV.bed bed (peaks); assembly: GRCh38 33.8 KB
ENCFF051CYD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.0 MB
ENCFF111NHE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.5 MB
ENCFF151ZTH.bed bed (peaks); assembly: hg19 32.8 KB
ENCFF187YLY.fastq fastq (reads) 566.1 MB
ENCFF294XKC.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.5 MB
ENCFF321XTY.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF391XZA.bigBed bigBed (peaks); assembly: GRCh38 763.1 KB
ENCFF413SVN.fastq fastq (reads) 486.9 MB
ENCFF443ABK.bed bed (peaks); assembly: GRCh38 377.6 KB
ENCFF519UHQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.7 MB
ENCFF540EIN.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF581UEA.bam bam (alignments); assembly: hg19 101.1 MB
ENCFF625XVL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.3 MB
ENCFF678VMJ.bigBed bigBed (peaks); assembly: hg19 788.4 KB
ENCFF701BNI.bed bed (peaks); assembly: hg19 393.3 KB
ENCFF710RUU.bam bam (alignments); assembly: GRCh38 198.5 MB
ENCFF719MCG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.2 MB
ENCFF820DWM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.6 MB
ENCFF916SOX.fastq fastq (reads) 334.5 MB
ENCFF928HUA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.6 MB
ENCFF972INE.bed bed (peaks); assembly: hg19 780.9 KB
ENCFF981APU.bam bam (alignments); assembly: hg19 207.3 MB
ENCSR831WYG ENCSR via encode_api

eCLIP control experiment on HepG2 against EXOSC5

Homo sapiens
8 data files
FileTypeSize
ENCFF190LZU.fastq fastq (reads) 531.2 MB
ENCFF228TZD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.2 MB
ENCFF418PCV.fastq fastq (reads) 556.9 MB
ENCFF500BEE.bam bam (alignments); assembly: hg19 234.8 MB
ENCFF531FRE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 9.1 MB
ENCFF608WNY.bam bam (alignments); assembly: GRCh38 236.7 MB
ENCFF712GVF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.0 MB
ENCFF941MAV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.1 MB
ENCSR952RGL ENCSR via encode_api

eCLIP control experiment on K562 against AQR

Homo sapiens
8 data files
FileTypeSize
ENCFF122NOF.bam bam (alignments); assembly: hg19 652.3 MB
ENCFF209ZSA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 30.4 MB
ENCFF467AXE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 31.3 MB
ENCFF512ICX.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 30.3 MB
ENCFF671DQC.fastq fastq (reads) 697.3 MB
ENCFF759FOS.fastq fastq (reads) 647.3 MB
ENCFF795HGN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 29.4 MB
ENCFF899ROO.bam bam (alignments); assembly: GRCh38 673.8 MB
ENCSR290JPJ ENCSR via encode_api

eCLIP control experiment on K562 against AATF

Homo sapiens
8 data files
FileTypeSize
ENCFF064UJY.bam bam (alignments); assembly: GRCh38 789.1 MB
ENCFF093NIR.bam bam (alignments); assembly: hg19 776.4 MB
ENCFF197PPC.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 34.9 MB
ENCFF364QTT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 34.3 MB
ENCFF440KLK.fastq fastq (reads) 788.0 MB
ENCFF584ORU.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 33.7 MB
ENCFF607BAY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 33.2 MB
ENCFF934QLS.fastq fastq (reads) 845.2 MB
ENCSR023PKW ENCSR via encode_api

eCLIP experiment on K562 against EIF3G

Homo sapiens
26 data files
FileTypeSize
ENCFF031UFI.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.8 MB
ENCFF083KKV.bam bam (alignments); assembly: hg19 183.9 MB
ENCFF258VPL.bed bed (peaks); assembly: hg19 520.5 KB
ENCFF259ZQR.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.3 MB
ENCFF362BDI.bed bed (peaks); assembly: hg19 279.4 KB
ENCFF364MMW.fastq fastq (reads) 502.7 MB
ENCFF369RBP.bed bed (peaks); assembly: GRCh38 256.8 KB
ENCFF388GZP.bed bed (peaks); assembly: GRCh38 566.8 KB
ENCFF523PRE.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF534ONM.bed bed (peaks); assembly: hg19 7.4 KB
ENCFF548DYX.fastq fastq (reads) 211.7 MB
ENCFF570LAY.bigBed bigBed (peaks); assembly: hg19 528.2 KB
ENCFF605PZM.bam bam (alignments); assembly: GRCh38 175.8 MB
ENCFF613CYM.bam bam (alignments); assembly: hg19 55.3 MB
ENCFF627GSD.fastq fastq (reads) 484.1 MB
ENCFF634UAC.bed bed (peaks); assembly: GRCh38 7.3 KB
ENCFF639CRA.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.0 MB
ENCFF692DXH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.0 MB
ENCFF724QGF.bam bam (alignments); assembly: GRCh38 51.2 MB
ENCFF732EGK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.8 MB
ENCFF743RET.bigBed bigBed (peaks); assembly: hg19 815.0 KB
ENCFF813DFW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.9 MB
ENCFF827LVH.bigBed bigBed (peaks); assembly: GRCh38 499.1 KB
ENCFF897PMP.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.5 MB
ENCFF908IVH.fastq fastq (reads) 219.0 MB
ENCFF958RJQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.1 MB
ENCSR986HXA ENCSR via encode_api

eCLIP control experiment on HepG2 against FUS

Homo sapiens
8 data files
FileTypeSize
ENCFF078WXK.fastq fastq (reads) 546.4 MB
ENCFF117HXE.bam bam (alignments); assembly: GRCh38 483.3 MB
ENCFF407YXM.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 18.5 MB
ENCFF609YLK.fastq fastq (reads) 542.0 MB
ENCFF641UBZ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 19.2 MB
ENCFF654ULI.bam bam (alignments); assembly: hg19 470.4 MB
ENCFF930VRG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 18.9 MB
ENCFF967SUL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 18.6 MB
ENCSR249ROI ENCSR via encode_api

eCLIP experiment on K562 against HNRNPC

Homo sapiens
26 data files
FileTypeSize
ENCFF048BIQ.bam bam (alignments); assembly: GRCh38 593.7 MB
ENCFF062LWZ.bed bed (peaks); assembly: hg19 1.6 MB
ENCFF147RRK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 100.7 MB
ENCFF149LRA.fastq fastq (reads) 586.4 MB
ENCFF159HMF.bed bed (peaks); assembly: hg19 13.4 KB
ENCFF167CDB.bed bed (peaks); assembly: GRCh38 12.5 KB
ENCFF187OQS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 28.4 MB
ENCFF202EXL.bigBed bigBed (peaks); assembly: hg19 3.5 MB
ENCFF214HGS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 73.4 MB
ENCFF330MMF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 96.9 MB
ENCFF334ACF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 29.4 MB
ENCFF381SDJ.bam bam (alignments); assembly: hg19 1.9 GB
ENCFF526OQL.bed bed (peaks); assembly: GRCh38 1.8 MB
ENCFF664RLU.bed bed (peaks); assembly: GRCh38 1.5 MB
ENCFF669MUY.fastq fastq (reads) 2.1 GB
ENCFF669YBJ.bam bam (alignments); assembly: hg19 636.6 MB
ENCFF734JPC.fastq fastq (reads) 513.9 MB
ENCFF749IQI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 91.7 MB
ENCFF778YMU.bigBed bigBed (peaks); assembly: hg19 2.5 MB
ENCFF810SWJ.bigBed bigBed (peaks); assembly: GRCh38 2.3 MB
ENCFF865EZO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 26.6 MB
ENCFF896JOI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 27.6 MB
ENCFF935AZO.bam bam (alignments); assembly: GRCh38 1.8 GB
ENCFF937KFG.fastq fastq (reads) 1.8 GB
ENCFF961KTO.bigBed bigBed (peaks); assembly: GRCh38 3.3 MB
ENCFF971ZDB.bed bed (peaks); assembly: hg19 1.9 MB
ENCSR451BRX ENCSR via encode_api

eCLIP control experiment on HepG2 against SAFB

Homo sapiens
8 data files
FileTypeSize
ENCFF147POJ.fastq fastq (reads) 662.2 MB
ENCFF151WVP.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 21.8 MB
ENCFF172IOQ.bam bam (alignments); assembly: hg19 447.8 MB
ENCFF184MJQ.fastq fastq (reads) 609.8 MB
ENCFF220AIC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 22.7 MB
ENCFF322YUD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 22.7 MB
ENCFF446RHU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 21.8 MB
ENCFF829ROW.bam bam (alignments); assembly: GRCh38 460.7 MB
ENCSR832DWW ENCSR via encode_api

eCLIP control experiment on K562 against PUM1

Homo sapiens
8 data files
FileTypeSize
ENCFF073FDN.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.4 MB
ENCFF222HEX.bam bam (alignments); assembly: GRCh38 307.0 MB
ENCFF294VPI.fastq fastq (reads) 621.3 MB
ENCFF344PFX.bam bam (alignments); assembly: hg19 300.9 MB
ENCFF454WIB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.3 MB
ENCFF475RBN.fastq fastq (reads) 598.8 MB
ENCFF870PZG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.6 MB
ENCFF913EFB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.0 MB
ENCSR599YGK ENCSR via encode_api

eCLIP control experiment on HepG2 against TIAL1

Homo sapiens
8 data files
FileTypeSize
ENCFF079DOO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.3 MB
ENCFF095YOS.fastq fastq (reads) 291.6 MB
ENCFF264FSL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.1 MB
ENCFF335LFP.fastq fastq (reads) 282.9 MB
ENCFF447ZAZ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.5 MB
ENCFF563EHM.bam bam (alignments); assembly: GRCh38 217.8 MB
ENCFF582MNJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.3 MB
ENCFF593ZRE.bam bam (alignments); assembly: hg19 212.3 MB
ENCSR960OKV ENCSR via encode_api

eCLIP control experiment on K562 against HNRNPC

Homo sapiens
8 data files
FileTypeSize
ENCFF143NLE.fastq fastq (reads) 635.7 MB
ENCFF171UGC.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 8.5 MB
ENCFF235XQO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 8.8 MB
ENCFF309BBY.fastq fastq (reads) 578.0 MB
ENCFF338MIV.bam bam (alignments); assembly: hg19 194.8 MB
ENCFF346WLL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 8.4 MB
ENCFF365NFD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 8.3 MB
ENCFF824ZDF.bam bam (alignments); assembly: GRCh38 196.5 MB
ENCSR979EWD ENCSR via encode_api

eCLIP experiment on HepG2 against STAU2

Homo sapiens
26 data files
FileTypeSize
ENCFF022VMG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 40.4 MB
ENCFF048PWH.fastq fastq (reads) 479.5 MB
ENCFF061SBF.bigBed bigBed (peaks); assembly: GRCh38 5.2 MB
ENCFF169YHS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 30.0 MB
ENCFF197UHX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 29.1 MB
ENCFF202ITE.bam bam (alignments); assembly: GRCh38 616.5 MB
ENCFF314FTK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 27.8 MB
ENCFF357LSF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 28.6 MB
ENCFF366NPD.fastq fastq (reads) 380.8 MB
ENCFF382AIQ.bigBed bigBed (peaks); assembly: hg19 4.8 MB
ENCFF425OKT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 41.7 MB
ENCFF446NFS.bed bed (peaks); assembly: GRCh38 2.4 MB
ENCFF559ATC.bam bam (alignments); assembly: GRCh38 913.6 MB
ENCFF591CBW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 39.4 MB
ENCFF648BIE.bigBed bigBed (peaks); assembly: GRCh38 4.7 MB
ENCFF659GPS.fastq fastq (reads) 306.2 MB
ENCFF678FCX.bed bed (peaks); assembly: GRCh38 18.5 KB
ENCFF694MAN.bigBed bigBed (peaks); assembly: hg19 5.2 MB
ENCFF709VHF.bam bam (alignments); assembly: hg19 945.8 MB
ENCFF734LHC.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 40.6 MB
ENCFF788LMZ.bed bed (peaks); assembly: hg19 17.2 KB
ENCFF792GQD.bed bed (peaks); assembly: hg19 2.5 MB
ENCFF879BYO.bed bed (peaks); assembly: hg19 2.8 MB
ENCFF884DMT.bam bam (alignments); assembly: hg19 641.5 MB
ENCFF920RKR.fastq fastq (reads) 387.4 MB
ENCFF992ALD.bed bed (peaks); assembly: GRCh38 2.8 MB
ENCSR970FEW ENCSR via encode_api

eCLIP experiment on HepG2 against DDX52

Homo sapiens
26 data files
FileTypeSize
ENCFF005GER.bed bed (peaks); assembly: GRCh38 3.7 KB
ENCFF013SWN.bed bed (peaks); assembly: GRCh38 1.6 MB
ENCFF037HRM.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF162FCY.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF257KKQ.bed bed (peaks); assembly: hg19 3.5 KB
ENCFF288FUX.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 19.6 MB
ENCFF299YXS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.1 MB
ENCFF340WIB.bam bam (alignments); assembly: GRCh38 334.9 MB
ENCFF356MCF.bam bam (alignments); assembly: hg19 375.0 MB
ENCFF360FIN.bigBed bigBed (peaks); assembly: GRCh38 2.7 MB
ENCFF408KBS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 18.4 MB
ENCFF479WLK.fastq fastq (reads) 647.2 MB
ENCFF480SDO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 18.0 MB
ENCFF504QEC.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 18.4 MB
ENCFF522NFJ.fastq fastq (reads) 657.3 MB
ENCFF539JUN.bed bed (peaks); assembly: hg19 1.7 MB
ENCFF560TLH.fastq fastq (reads) 667.6 MB
ENCFF563XEI.bed bed (peaks); assembly: GRCh38 1.6 MB
ENCFF591WOA.bed bed (peaks); assembly: hg19 1.7 MB
ENCFF599ZVK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 19.9 MB
ENCFF618EON.bam bam (alignments); assembly: GRCh38 358.4 MB
ENCFF684ITO.bigBed bigBed (peaks); assembly: GRCh38 2.7 MB
ENCFF879GTY.bam bam (alignments); assembly: hg19 347.0 MB
ENCFF939HML.fastq fastq (reads) 643.5 MB
ENCFF945OFF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 18.9 MB
ENCFF953HPK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 20.5 MB
ENCSR964VOX ENCSR via encode_api

eCLIP experiment on K562 against UTP18

Homo sapiens
26 data files
FileTypeSize
ENCFF003MPD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.8 MB
ENCFF014AWF.bed bed (peaks); assembly: hg19 374.5 KB
ENCFF026UJY.bed bed (peaks); assembly: GRCh38 362.9 KB
ENCFF033CAR.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.0 MB
ENCFF038OVY.fastq fastq (reads) 686.0 MB
ENCFF046FNK.bam bam (alignments); assembly: GRCh38 83.5 MB
ENCFF049JUK.bigBed bigBed (peaks); assembly: hg19 760.3 KB
ENCFF100KST.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 4.4 MB
ENCFF148JQN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.1 MB
ENCFF211AAW.bam bam (alignments); assembly: GRCh38 73.7 MB
ENCFF252UGK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.3 MB
ENCFF353ULN.bed bed (peaks); assembly: GRCh38 292.7 KB
ENCFF368MWK.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.8 MB
ENCFF379LHC.bed bed (peaks); assembly: hg19 307.4 KB
ENCFF386YUM.fastq fastq (reads) 613.4 MB
ENCFF421EUK.bigBed bigBed (peaks); assembly: hg19 661.6 KB
ENCFF456SOS.bed bed (peaks); assembly: hg19 3.7 KB
ENCFF625BWN.bigBed bigBed (peaks); assembly: GRCh38 742.8 KB
ENCFF656OVN.fastq fastq (reads) 643.2 MB
ENCFF694SHS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.7 MB
ENCFF724EMZ.bam bam (alignments); assembly: hg19 77.8 MB
ENCFF757VLY.bigBed bigBed (peaks); assembly: GRCh38 634.8 KB
ENCFF783INO.bed bed (peaks); assembly: GRCh38 3.6 KB
ENCFF795DXS.fastq fastq (reads) 714.6 MB
ENCFF946PZY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 4.2 MB
ENCFF946YXD.bam bam (alignments); assembly: hg19 86.4 MB
ENCSR145ZKN ENCSR via encode_api

eCLIP control experiment on HepG2 against SSB

Homo sapiens
8 data files
FileTypeSize
ENCFF204GWG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.8 MB
ENCFF291AXK.fastq fastq (reads) 636.4 MB
ENCFF417RUN.bam bam (alignments); assembly: GRCh38 214.5 MB
ENCFF533GVG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.1 MB
ENCFF634ZXH.fastq fastq (reads) 688.7 MB
ENCFF686PVN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 8.9 MB
ENCFF820ONK.bam bam (alignments); assembly: hg19 210.7 MB
ENCFF941EJX.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 8.9 MB
ENCSR337XGI ENCSR via encode_api

eCLIP experiment on HepG2 against SAFB

Homo sapiens
26 data files
FileTypeSize
ENCFF024XIO.bigBed bigBed (peaks); assembly: hg19 4.9 MB
ENCFF029LOP.bigBed bigBed (peaks); assembly: GRCh38 3.6 MB
ENCFF035IYP.bed bed (peaks); assembly: hg19 2.4 MB
ENCFF040MFF.fastq fastq (reads) 691.9 MB
ENCFF056OAB.bed bed (peaks); assembly: GRCh38 2.5 MB
ENCFF112CRX.bam bam (alignments); assembly: GRCh38 904.7 MB
ENCFF112GIE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 39.2 MB
ENCFF134UTH.fastq fastq (reads) 620.2 MB
ENCFF232WUE.bed bed (peaks); assembly: GRCh38 6.6 KB
ENCFF255QDJ.bam bam (alignments); assembly: hg19 821.4 MB
ENCFF272SVX.fastq fastq (reads) 618.3 MB
ENCFF399MVB.bed bed (peaks); assembly: GRCh38 2.4 MB
ENCFF419KEL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 39.6 MB
ENCFF432SVT.bigBed bigBed (peaks); assembly: hg19 3.6 MB
ENCFF469SRC.bed bed (peaks); assembly: hg19 5.7 KB
ENCFF489WXE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 35.9 MB
ENCFF526JFL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 36.3 MB
ENCFF535RVD.bam bam (alignments); assembly: GRCh38 816.3 MB
ENCFF543ZXM.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 35.9 MB
ENCFF615AJW.bigBed bigBed (peaks); assembly: GRCh38 3.8 MB
ENCFF667EYO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 35.4 MB
ENCFF669OQB.bam bam (alignments); assembly: hg19 914.5 MB
ENCFF707BBC.fastq fastq (reads) 694.7 MB
ENCFF896KRQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 38.8 MB
ENCFF932VUF.bed bed (peaks); assembly: hg19 2.6 MB
ENCFF971JOK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 39.9 MB
ENCSR256CHX ENCSR via encode_api

eCLIP experiment on HepG2 against PCBP1

Homo sapiens
26 data files
FileTypeSize
ENCFF041ULU.bam bam (alignments); assembly: hg19 73.0 MB
ENCFF098REE.bed bed (peaks); assembly: GRCh38 21.6 KB
ENCFF108TOJ.bed bed (peaks); assembly: hg19 22.0 KB
ENCFF121EWJ.bigBed bigBed (peaks); assembly: hg19 850.1 KB
ENCFF125HTS.fastq fastq (reads) 362.4 MB
ENCFF138HUE.bam bam (alignments); assembly: GRCh38 114.7 MB
ENCFF144ZBH.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.0 MB
ENCFF163UHG.bigBed bigBed (peaks); assembly: GRCh38 829.3 KB
ENCFF208ZBZ.bigBed bigBed (peaks); assembly: hg19 577.8 KB
ENCFF252BJN.bed bed (peaks); assembly: hg19 273.4 KB
ENCFF336LKZ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.3 MB
ENCFF423IFM.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.4 MB
ENCFF469KBI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.0 MB
ENCFF502OYV.bed bed (peaks); assembly: GRCh38 431.6 KB
ENCFF512ADR.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.9 MB
ENCFF547HEQ.bam bam (alignments); assembly: hg19 119.4 MB
ENCFF627OUC.fastq fastq (reads) 406.3 MB
ENCFF628HQO.bigBed bigBed (peaks); assembly: GRCh38 543.2 KB
ENCFF679TMH.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.5 MB
ENCFF725CBA.fastq fastq (reads) 331.8 MB
ENCFF737KHA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.1 MB
ENCFF914VUW.bed bed (peaks); assembly: GRCh38 253.2 KB
ENCFF933ESS.bam bam (alignments); assembly: GRCh38 67.3 MB
ENCFF940CJE.bed bed (peaks); assembly: hg19 442.6 KB
ENCFF964VGV.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.6 MB
ENCFF973FFS.fastq fastq (reads) 361.3 MB
ENCSR328KKB ENCSR via encode_api

eCLIP control experiment on K562 against SUPV3L1

Homo sapiens
8 data files
FileTypeSize
ENCFF148LED.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 58.9 MB
ENCFF445GIJ.bam bam (alignments); assembly: hg19 1.5 GB
ENCFF494OQG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 56.7 MB
ENCFF701GTE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 58.9 MB
ENCFF781OKE.bam bam (alignments); assembly: GRCh38 1.5 GB
ENCFF808KHS.fastq fastq (reads) 2.7 GB
ENCFF927QYY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 56.7 MB
ENCFF936WEJ.fastq fastq (reads) 2.8 GB
ENCSR085JPB ENCSR via encode_api

eCLIP experiment on HepG2 against WDR43

Homo sapiens
26 data files
FileTypeSize
ENCFF014YMA.bed bed (peaks); assembly: GRCh38 602.0 KB
ENCFF025FEX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.5 MB
ENCFF034IPX.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.6 MB
ENCFF039OIV.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF060BRD.bam bam (alignments); assembly: GRCh38 133.1 MB
ENCFF069PAM.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF126WLG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.5 MB
ENCFF133XVB.fastq fastq (reads) 532.8 MB
ENCFF177OFX.bigBed bigBed (peaks); assembly: GRCh38 1.2 MB
ENCFF291FNE.fastq fastq (reads) 524.9 MB
ENCFF362ZCB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.4 MB
ENCFF416VBG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.5 MB
ENCFF431WWR.bed bed (peaks); assembly: hg19 4.6 KB
ENCFF503AHN.fastq fastq (reads) 485.6 MB
ENCFF525GUS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.4 MB
ENCFF569JWF.bam bam (alignments); assembly: hg19 139.6 MB
ENCFF577MTW.fastq fastq (reads) 481.7 MB
ENCFF784AMG.bed bed (peaks); assembly: hg19 643.5 KB
ENCFF847AOM.bam bam (alignments); assembly: GRCh38 135.1 MB
ENCFF868YSF.bed bed (peaks); assembly: hg19 621.0 KB
ENCFF884EHK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.3 MB
ENCFF938XEE.bam bam (alignments); assembly: hg19 139.8 MB
ENCFF944ZRE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.7 MB
ENCFF945NFS.bed bed (peaks); assembly: GRCh38 4.7 KB
ENCFF966QXZ.bed bed (peaks); assembly: GRCh38 628.0 KB
ENCFF977RCC.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCSR999YGP ENCSR via encode_api

eCLIP experiment on K562 against GRWD1

Homo sapiens
26 data files
FileTypeSize
ENCFF022OZR.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 23.0 MB
ENCFF051YGO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 16.4 MB
ENCFF080NUM.bigBed bigBed (peaks); assembly: hg19 3.0 MB
ENCFF128BVH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 23.1 MB
ENCFF135LNE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 23.8 MB
ENCFF146YIO.bed bed (peaks); assembly: hg19 96.6 KB
ENCFF217MRO.bam bam (alignments); assembly: GRCh38 504.4 MB
ENCFF248ZFV.fastq fastq (reads) 327.0 MB
ENCFF250PFH.bed bed (peaks); assembly: GRCh38 1.5 MB
ENCFF282VMI.bed bed (peaks); assembly: GRCh38 1.9 MB
ENCFF315NPJ.bigBed bigBed (peaks); assembly: GRCh38 3.6 MB
ENCFF327DLL.bed bed (peaks); assembly: GRCh38 98.3 KB
ENCFF330PVJ.bam bam (alignments); assembly: GRCh38 320.5 MB
ENCFF479IAR.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 22.4 MB
ENCFF491DNL.bam bam (alignments); assembly: hg19 525.2 MB
ENCFF499RMW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 17.0 MB
ENCFF569HJH.fastq fastq (reads) 350.0 MB
ENCFF598OCW.bigBed bigBed (peaks); assembly: GRCh38 3.0 MB
ENCFF607PIM.bed bed (peaks); assembly: hg19 1.5 MB
ENCFF727IRZ.fastq fastq (reads) 609.2 MB
ENCFF752TOA.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 16.7 MB
ENCFF757KMM.bed bed (peaks); assembly: hg19 1.8 MB
ENCFF863GEM.bigBed bigBed (peaks); assembly: hg19 3.6 MB
ENCFF885NJW.bam bam (alignments); assembly: hg19 327.9 MB
ENCFF895OFS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 17.2 MB
ENCFF939DRW.fastq fastq (reads) 557.6 MB
ENCSR241ALC ENCSR via encode_api

eCLIP control experiment on K562 against UTP3

Homo sapiens
8 data files
FileTypeSize
ENCFF090UAF.bam bam (alignments); assembly: GRCh38 771.2 MB
ENCFF204HIN.bam bam (alignments); assembly: hg19 755.6 MB
ENCFF350BNG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 33.1 MB
ENCFF352XFW.fastq fastq (reads) 931.8 MB
ENCFF395XPK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 33.8 MB
ENCFF589HIG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 35.1 MB
ENCFF850GVH.fastq fastq (reads) 826.8 MB
ENCFF987LUJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 34.4 MB
ENCSR925ZRV ENCSR via encode_api

eCLIP control experiment on K562 against WRN

Homo sapiens
8 data files
FileTypeSize
ENCFF059UMY.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 34.7 MB
ENCFF068FML.bam bam (alignments); assembly: GRCh38 716.8 MB
ENCFF096XKU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 34.9 MB
ENCFF137BBS.fastq fastq (reads) 761.6 MB
ENCFF273PGD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 35.8 MB
ENCFF313VVY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 33.9 MB
ENCFF467KQF.fastq fastq (reads) 858.0 MB
ENCFF922LFX.bam bam (alignments); assembly: hg19 700.1 MB
ENCSR722KGI ENCSR via encode_api

eCLIP control experiment on HepG2 against WDR43

Homo sapiens
8 data files
FileTypeSize
ENCFF194QLJ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.8 MB
ENCFF197ATB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.0 MB
ENCFF274FAE.fastq fastq (reads) 220.6 MB
ENCFF535EYW.fastq fastq (reads) 207.7 MB
ENCFF673XAM.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.9 MB
ENCFF732NGW.bam bam (alignments); assembly: GRCh38 268.4 MB
ENCFF844FOV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.9 MB
ENCFF917IQK.bam bam (alignments); assembly: hg19 266.3 MB
ENCSR356ZMO ENCSR via encode_api

eCLIP experiment on HepG2 against AKAP1

Homo sapiens
26 data files
FileTypeSize
ENCFF075DAU.fastq fastq (reads) 472.4 MB
ENCFF122EAJ.bigBed bigBed (peaks); assembly: GRCh38 1.7 MB
ENCFF127MXD.bam bam (alignments); assembly: GRCh38 284.1 MB
ENCFF210MSW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.0 MB
ENCFF233BIC.bed bed (peaks); assembly: GRCh38 944.8 KB
ENCFF271UXH.bed bed (peaks); assembly: hg19 980.8 KB
ENCFF351AQY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.9 MB
ENCFF382JHI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.4 MB
ENCFF413QOV.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 15.2 MB
ENCFF416NDI.bigBed bigBed (peaks); assembly: GRCh38 1.9 MB
ENCFF430MTS.bam bam (alignments); assembly: hg19 300.5 MB
ENCFF473TXX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.8 MB
ENCFF509CIP.bigBed bigBed (peaks); assembly: hg19 1.8 MB
ENCFF523YBN.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF575BCP.bed bed (peaks); assembly: hg19 136.1 KB
ENCFF672HYO.fastq fastq (reads) 419.0 MB
ENCFF739ERP.bed bed (peaks); assembly: GRCh38 840.7 KB
ENCFF749IUB.bed bed (peaks); assembly: GRCh38 137.7 KB
ENCFF776AQI.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.5 MB
ENCFF780HTF.bam bam (alignments); assembly: GRCh38 265.9 MB
ENCFF807KPM.bed bed (peaks); assembly: hg19 862.0 KB
ENCFF810DIK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.6 MB
ENCFF847SYN.bam bam (alignments); assembly: hg19 277.7 MB
ENCFF852ECZ.fastq fastq (reads) 399.9 MB
ENCFF882JAU.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 14.1 MB
ENCFF990EAG.fastq fastq (reads) 448.0 MB
ENCSR040QLV ENCSR via encode_api

eCLIP experiment on K562 against DDX21

Homo sapiens
26 data files
FileTypeSize
ENCFF005ZCI.bed bed (peaks); assembly: GRCh38 356.2 KB
ENCFF006QTI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.3 MB
ENCFF028CQB.bigBed bigBed (peaks); assembly: GRCh38 753.8 KB
ENCFF099RYM.bam bam (alignments); assembly: hg19 88.2 MB
ENCFF139OJJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.5 MB
ENCFF159PUC.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF180UZN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.4 MB
ENCFF253EGX.fastq fastq (reads) 729.6 MB
ENCFF353WIB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.3 MB
ENCFF363TSA.fastq fastq (reads) 700.8 MB
ENCFF371SNO.bed bed (peaks); assembly: GRCh38 746.4 KB
ENCFF378OYA.bed bed (peaks); assembly: GRCh38 2.1 KB
ENCFF402AXI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.8 MB
ENCFF420HTZ.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF429PEL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.6 MB
ENCFF455REV.bam bam (alignments); assembly: GRCh38 166.1 MB
ENCFF485TSN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.3 MB
ENCFF559UQP.bigBed bigBed (peaks); assembly: hg19 769.4 KB
ENCFF572GMO.bed bed (peaks); assembly: hg19 364.3 KB
ENCFF655QSG.bam bam (alignments); assembly: GRCh38 85.9 MB
ENCFF671GCD.fastq fastq (reads) 666.0 MB
ENCFF740MPP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.0 MB
ENCFF800GPC.bed bed (peaks); assembly: hg19 2.2 KB
ENCFF845KUG.bam bam (alignments); assembly: hg19 169.9 MB
ENCFF945XNS.bed bed (peaks); assembly: hg19 747.9 KB
ENCFF946SJB.fastq fastq (reads) 681.5 MB
ENCSR202HKN ENCSR via encode_api

eCLIP experiment on K562 against WDR3

Homo sapiens
26 data files
FileTypeSize
ENCFF053JDY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.8 MB
ENCFF093FTO.bed bed (peaks); assembly: GRCh38 368.6 KB
ENCFF096AQT.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 3.4 MB
ENCFF110QAU.bed bed (peaks); assembly: GRCh38 153.4 KB
ENCFF215XPR.bed bed (peaks); assembly: hg19 911.0 B
ENCFF270QTE.fastq fastq (reads) 647.0 MB
ENCFF308MZK.bigBed bigBed (peaks); assembly: hg19 362.3 KB
ENCFF372YUO.bam bam (alignments); assembly: GRCh38 55.1 MB
ENCFF380SYQ.bed bed (peaks); assembly: hg19 160.4 KB
ENCFF416OND.bam bam (alignments); assembly: GRCh38 65.9 MB
ENCFF426QHQ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.9 MB
ENCFF444UFA.bam bam (alignments); assembly: hg19 57.2 MB
ENCFF469DUE.bigBed bigBed (peaks); assembly: hg19 686.1 KB
ENCFF474ULB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.7 MB
ENCFF507SLL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 3.3 MB
ENCFF560RWD.bed bed (peaks); assembly: GRCh38 838.0 B
ENCFF593DHS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.6 MB
ENCFF636LWR.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.4 MB
ENCFF731PVT.bam bam (alignments); assembly: hg19 70.2 MB
ENCFF733LSZ.fastq fastq (reads) 513.3 MB
ENCFF765GUO.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.0 MB
ENCFF787GQZ.bigBed bigBed (peaks); assembly: GRCh38 656.9 KB
ENCFF824USQ.bigBed bigBed (peaks); assembly: GRCh38 352.9 KB
ENCFF915BUQ.fastq fastq (reads) 537.0 MB
ENCFF953XOY.fastq fastq (reads) 421.4 MB
ENCFF991NPH.bed bed (peaks); assembly: hg19 391.6 KB
ENCSR891RIC ENCSR via encode_api

eCLIP experiment on K562 against NIPBL

Homo sapiens
26 data files
FileTypeSize
ENCFF021HWA.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF022RTU.fastq fastq (reads) 835.5 MB
ENCFF090TCL.bigBed bigBed (peaks); assembly: GRCh38 2.5 MB
ENCFF092XHF.bed bed (peaks); assembly: hg19 8.6 KB
ENCFF097GJE.bed bed (peaks); assembly: GRCh38 851.3 KB
ENCFF195SFG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.3 MB
ENCFF226EJN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.9 MB
ENCFF239HHG.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF249KWW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.3 MB
ENCFF283JMP.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.5 MB
ENCFF325XUV.fastq fastq (reads) 625.6 MB
ENCFF400EPM.bam bam (alignments); assembly: GRCh38 134.8 MB
ENCFF461YQO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.6 MB
ENCFF472YSO.bam bam (alignments); assembly: hg19 250.5 MB
ENCFF484RAM.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF525NXB.bed bed (peaks); assembly: hg19 862.3 KB
ENCFF532OLG.bam bam (alignments); assembly: GRCh38 241.3 MB
ENCFF554NIV.bed bed (peaks); assembly: GRCh38 8.3 KB
ENCFF563ZUY.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF581SNU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.7 MB
ENCFF658FIC.fastq fastq (reads) 613.7 MB
ENCFF742IAV.fastq fastq (reads) 804.2 MB
ENCFF861ARK.bam bam (alignments); assembly: hg19 137.8 MB
ENCFF973PQI.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.4 MB
ENCFF983YQJ.bigBed bigBed (peaks); assembly: GRCh38 1.5 MB
ENCFF991MMA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.8 MB
ENCSR138HJN ENCSR via encode_api

eCLIP control experiment on HepG2 against NIP7

Homo sapiens
8 data files
FileTypeSize
ENCFF023VWU.fastq fastq (reads) 752.0 MB
ENCFF224AXJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.6 MB
ENCFF325ZEZ.bam bam (alignments); assembly: hg19 167.0 MB
ENCFF347DCI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.8 MB
ENCFF637GMD.bam bam (alignments); assembly: GRCh38 170.2 MB
ENCFF641YDW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.4 MB
ENCFF850JPJ.fastq fastq (reads) 787.7 MB
ENCFF924JRU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.5 MB
ENCSR907EBB ENCSR via encode_api

eCLIP control experiment on HepG2 against G3BP1

Homo sapiens
8 data files
FileTypeSize
ENCFF375RZW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.0 MB
ENCFF483ETG.fastq fastq (reads) 605.0 MB
ENCFF549BBF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.2 MB
ENCFF574CCO.fastq fastq (reads) 624.5 MB
ENCFF581DQC.bam bam (alignments); assembly: hg19 307.5 MB
ENCFF690KCN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 12.4 MB
ENCFF700YZD.bam bam (alignments); assembly: GRCh38 313.5 MB
ENCFF774ZOO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.3 MB
ENCSR268SKI ENCSR via encode_api

eCLIP control experiment on K562 against DDX51

Homo sapiens
8 data files
FileTypeSize
ENCFF057EYS.fastq fastq (reads) 593.1 MB
ENCFF224JPZ.bam bam (alignments); assembly: GRCh38 562.1 MB
ENCFF272LXG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 26.9 MB
ENCFF323GSD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 25.6 MB
ENCFF407VKW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 26.0 MB
ENCFF509GAY.bam bam (alignments); assembly: hg19 553.1 MB
ENCFF765PJY.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 26.5 MB
ENCFF839MJH.fastq fastq (reads) 551.6 MB
ENCSR440SUX ENCSR via encode_api

eCLIP experiment on K562 against MATR3

Homo sapiens
26 data files
FileTypeSize
ENCFF010BJI.bam bam (alignments); assembly: hg19 274.9 MB
ENCFF014KBZ.bam bam (alignments); assembly: GRCh38 260.9 MB
ENCFF046VQV.bed bed (peaks); assembly: hg19 96.6 KB
ENCFF055OIQ.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF073KHR.bigBed bigBed (peaks); assembly: GRCh38 1.8 MB
ENCFF074EAD.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.1 MB
ENCFF081JME.bed bed (peaks); assembly: GRCh38 923.8 KB
ENCFF121ZEY.bed bed (peaks); assembly: hg19 985.7 KB
ENCFF162SAS.bam bam (alignments); assembly: GRCh38 193.1 MB
ENCFF163VTI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.8 MB
ENCFF246EPM.bed bed (peaks); assembly: GRCh38 93.4 KB
ENCFF356OIG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.8 MB
ENCFF358JCT.fastq fastq (reads) 297.8 MB
ENCFF365CXY.fastq fastq (reads) 256.2 MB
ENCFF457BSQ.bam bam (alignments); assembly: hg19 208.0 MB
ENCFF470CYN.bigBed bigBed (peaks); assembly: GRCh38 2.3 MB
ENCFF558RNJ.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF564DPG.bigBed bigBed (peaks); assembly: hg19 2.4 MB
ENCFF597BHN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.7 MB
ENCFF698OGN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.5 MB
ENCFF703CJM.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 15.3 MB
ENCFF752ZNH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.4 MB
ENCFF776YBU.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.6 MB
ENCFF806OBL.fastq fastq (reads) 217.6 MB
ENCFF904GOE.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF991YSW.fastq fastq (reads) 188.6 MB
ENCSR488JKQ ENCSR via encode_api

eCLIP experiment on HepG2 against UTP18

Homo sapiens
26 data files
FileTypeSize
ENCFF002NJF.bigBed bigBed (peaks); assembly: hg19 954.4 KB
ENCFF019ITV.fastq fastq (reads) 649.0 MB
ENCFF040VQS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.4 MB
ENCFF117YFR.fastq fastq (reads) 606.2 MB
ENCFF146BNV.bed bed (peaks); assembly: GRCh38 479.6 KB
ENCFF176YUS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.5 MB
ENCFF196OAM.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.7 MB
ENCFF220TVR.bam bam (alignments); assembly: hg19 128.9 MB
ENCFF227SZN.bed bed (peaks); assembly: hg19 522.2 KB
ENCFF235ASG.bed bed (peaks); assembly: hg19 494.2 KB
ENCFF301DXX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.1 MB
ENCFF399VCU.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.0 MB
ENCFF422COM.bigBed bigBed (peaks); assembly: GRCh38 924.5 KB
ENCFF466WOW.fastq fastq (reads) 606.7 MB
ENCFF511WWE.bam bam (alignments); assembly: GRCh38 112.9 MB
ENCFF512QJQ.bigBed bigBed (peaks); assembly: hg19 987.7 KB
ENCFF555EML.fastq fastq (reads) 566.2 MB
ENCFF569STQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.3 MB
ENCFF644EIR.bed bed (peaks); assembly: GRCh38 1.3 KB
ENCFF660POU.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.2 MB
ENCFF701IJS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.2 MB
ENCFF747AWV.bam bam (alignments); assembly: hg19 116.7 MB
ENCFF753YJQ.bigBed bigBed (peaks); assembly: GRCh38 963.5 KB
ENCFF840HCE.bed bed (peaks); assembly: GRCh38 511.2 KB
ENCFF926QBW.bed bed (peaks); assembly: hg19 1.3 KB
ENCFF978BQG.bam bam (alignments); assembly: GRCh38 123.2 MB
ENCSR580OFI ENCSR via encode_api

eCLIP experiment on K562 against SUPV3L1

Homo sapiens
26 data files
FileTypeSize
ENCFF009JLQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 1.3 MB
ENCFF091RCB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.4 MB
ENCFF126HSF.fastq fastq (reads) 56.6 MB
ENCFF151FJE.bigBed bigBed (peaks); assembly: hg19 281.4 KB
ENCFF160AGW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 1.2 MB
ENCFF162ZXD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 1.2 MB
ENCFF171KZO.fastq fastq (reads) 49.4 MB
ENCFF207VRH.bed bed (peaks); assembly: hg19 107.2 KB
ENCFF239GPP.bed bed (peaks); assembly: GRCh38 1.6 KB
ENCFF243VMV.bigBed bigBed (peaks); assembly: GRCh38 364.7 KB
ENCFF321VGW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 1.2 MB
ENCFF496FIX.bam bam (alignments); assembly: GRCh38 22.4 MB
ENCFF526SPD.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.3 MB
ENCFF620GJH.bam bam (alignments); assembly: hg19 23.8 MB
ENCFF712HCB.bed bed (peaks); assembly: GRCh38 160.2 KB
ENCFF739HZG.bigBed bigBed (peaks); assembly: hg19 375.8 KB
ENCFF754WPL.bigBed bigBed (peaks); assembly: GRCh38 269.4 KB
ENCFF813UKO.fastq fastq (reads) 99.7 MB
ENCFF826MPO.bed bed (peaks); assembly: GRCh38 99.6 KB
ENCFF829FDR.bam bam (alignments); assembly: GRCh38 37.6 MB
ENCFF852ZSI.bam bam (alignments); assembly: hg19 39.1 MB
ENCFF901ABJ.bed bed (peaks); assembly: hg19 1.7 KB
ENCFF942LSK.bed bed (peaks); assembly: hg19 168.2 KB
ENCFF956LBV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.3 MB
ENCFF971TGH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.4 MB
ENCFF987DVU.fastq fastq (reads) 86.9 MB
ENCSR018WPY ENCSR via encode_api

eCLIP experiment on HepG2 against AQR

Homo sapiens
26 data files
FileTypeSize
ENCFF016UFV.bed bed (peaks); assembly: hg19 1.6 MB
ENCFF019WXR.fastq fastq (reads) 407.8 MB
ENCFF072DMC.bam bam (alignments); assembly: hg19 322.7 MB
ENCFF073PST.bed bed (peaks); assembly: GRCh38 1.3 MB
ENCFF135VSZ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.2 MB
ENCFF159YFB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.4 MB
ENCFF163SMI.bigBed bigBed (peaks); assembly: GRCh38 3.1 MB
ENCFF166EBF.fastq fastq (reads) 459.0 MB
ENCFF323PUC.bed bed (peaks); assembly: GRCh38 229.1 KB
ENCFF351RHN.bed bed (peaks); assembly: hg19 230.9 KB
ENCFF393QAA.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.6 MB
ENCFF455ERC.fastq fastq (reads) 543.1 MB
ENCFF480KMS.bigBed bigBed (peaks); assembly: GRCh38 2.6 MB
ENCFF484VYD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.9 MB
ENCFF495SJR.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.6 MB
ENCFF615YND.bam bam (alignments); assembly: hg19 279.2 MB
ENCFF636MSJ.bed bed (peaks); assembly: GRCh38 1.5 MB
ENCFF752JLL.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF791WOH.bed bed (peaks); assembly: hg19 1.3 MB
ENCFF817TIH.bigBed bigBed (peaks); assembly: hg19 3.1 MB
ENCFF874FLM.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.9 MB
ENCFF882PEQ.bam bam (alignments); assembly: GRCh38 301.9 MB
ENCFF886TQE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.5 MB
ENCFF947JHV.bam bam (alignments); assembly: GRCh38 271.0 MB
ENCFF985BEH.fastq fastq (reads) 585.2 MB
ENCFF990SEI.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.6 MB
ENCSR816NVJ ENCSR via encode_api

eCLIP control experiment on K562 against NIPBL

Homo sapiens
8 data files
FileTypeSize
ENCFF257INK.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 36.7 MB
ENCFF283GNU.fastq fastq (reads) 990.6 MB
ENCFF396TYB.bam bam (alignments); assembly: GRCh38 804.6 MB
ENCFF411ZIS.bam bam (alignments); assembly: hg19 778.4 MB
ENCFF605BRP.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 39.3 MB
ENCFF687KVI.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 37.5 MB
ENCFF835HJQ.fastq fastq (reads) 917.9 MB
ENCFF998UXT.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 38.4 MB
ENCSR310WYE ENCSR via encode_api

eCLIP control experiment on HepG2 against PABPN1

Homo sapiens
8 data files
FileTypeSize
ENCFF056YAF.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.9 MB
ENCFF083BBO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.7 MB
ENCFF204AJE.fastq fastq (reads) 512.3 MB
ENCFF224LLH.bam bam (alignments); assembly: hg19 340.4 MB
ENCFF546IMW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.8 MB
ENCFF554TBF.bam bam (alignments); assembly: GRCh38 348.2 MB
ENCFF598XCN.fastq fastq (reads) 487.0 MB
ENCFF986GYN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.0 MB
ENCSR130ZDS ENCSR via encode_api

eCLIP control experiment on HepG2 against SDAD1

Homo sapiens
8 data files
FileTypeSize
ENCFF307RPY.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 19.0 MB
ENCFF484KXI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 19.3 MB
ENCFF558BFF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 18.5 MB
ENCFF575PPP.bam bam (alignments); assembly: hg19 424.6 MB
ENCFF831VQE.bam bam (alignments); assembly: GRCh38 434.1 MB
ENCFF908FHY.fastq fastq (reads) 597.9 MB
ENCFF932NND.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 18.7 MB
ENCFF942DWN.fastq fastq (reads) 665.6 MB
ENCSR382QLC ENCSR via encode_api

eCLIP control experiment on K562 against APOBEC3C

Homo sapiens
8 data files
FileTypeSize
ENCFF202KDA.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 7.5 MB
ENCFF264ZLT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 7.7 MB
ENCFF417GHU.fastq fastq (reads) 498.7 MB
ENCFF420VUM.bam bam (alignments); assembly: hg19 179.8 MB
ENCFF718JPO.fastq fastq (reads) 547.1 MB
ENCFF837QTK.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 7.4 MB
ENCFF854OMC.bam bam (alignments); assembly: GRCh38 180.2 MB
ENCFF886PUR.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 7.7 MB
ENCSR255PGS ENCSR via encode_api

eCLIP control experiment on K562 against UTP18

Homo sapiens
8 data files
FileTypeSize
ENCFF302FOE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.5 MB
ENCFF315ECX.fastq fastq (reads) 702.9 MB
ENCFF342GWG.bam bam (alignments); assembly: hg19 319.2 MB
ENCFF372JTR.fastq fastq (reads) 705.9 MB
ENCFF457RLT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.9 MB
ENCFF503MUZ.bam bam (alignments); assembly: GRCh38 325.5 MB
ENCFF686HTD.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 14.2 MB
ENCFF971PBE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.9 MB
ENCSR366DGX ENCSR via encode_api

eCLIP experiment on HepG2 against KHSRP

Homo sapiens
26 data files
FileTypeSize
ENCFF021EEK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 34.3 MB
ENCFF137MID.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 33.2 MB
ENCFF172TOY.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 33.2 MB
ENCFF226SDL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 33.9 MB
ENCFF324JVF.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 31.6 MB
ENCFF464FAG.bam bam (alignments); assembly: hg19 746.8 MB
ENCFF503GYR.fastq fastq (reads) 662.4 MB
ENCFF509GWT.bed bed (peaks); assembly: hg19 2.8 MB
ENCFF553APP.bed bed (peaks); assembly: hg19 106.8 KB
ENCFF558STP.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 33.5 MB
ENCFF573GBE.bigBed bigBed (peaks); assembly: GRCh38 5.5 MB
ENCFF609DDN.bigBed bigBed (peaks); assembly: hg19 5.7 MB
ENCFF611AHG.bed bed (peaks); assembly: GRCh38 2.9 MB
ENCFF630TDS.bigBed bigBed (peaks); assembly: GRCh38 5.5 MB
ENCFF701PJM.bam bam (alignments); assembly: GRCh38 729.5 MB
ENCFF771QAU.bed bed (peaks); assembly: GRCh38 106.0 KB
ENCFF830UWW.bigBed bigBed (peaks); assembly: hg19 5.4 MB
ENCFF840EOA.fastq fastq (reads) 623.6 MB
ENCFF844XLZ.fastq fastq (reads) 701.9 MB
ENCFF891IAC.bed bed (peaks); assembly: hg19 3.0 MB
ENCFF906PCP.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 31.7 MB
ENCFF950SML.fastq fastq (reads) 588.3 MB
ENCFF961WNO.bam bam (alignments); assembly: GRCh38 711.2 MB
ENCFF963RSK.bam bam (alignments); assembly: hg19 752.9 MB
ENCFF988MWD.bed bed (peaks); assembly: GRCh38 2.9 MB
ENCFF992GXR.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 32.8 MB
ENCSR155XOS ENCSR via encode_api

eCLIP control experiment on K562 against SDAD1

Homo sapiens
8 data files
FileTypeSize
ENCFF019TFV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.6 MB
ENCFF226CUA.bam bam (alignments); assembly: GRCh38 323.7 MB
ENCFF493QDI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 14.1 MB
ENCFF542UKT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.0 MB
ENCFF863JKQ.fastq fastq (reads) 641.1 MB
ENCFF953KYZ.fastq fastq (reads) 646.7 MB
ENCFF982LYY.bam bam (alignments); assembly: hg19 314.9 MB
ENCFF993YCZ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.5 MB
ENCSR705DCQ ENCSR via encode_api

eCLIP control experiment on HepG2 against HLTF

Homo sapiens
8 data files
FileTypeSize
ENCFF083UND.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 39.5 MB
ENCFF087EGO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 39.6 MB
ENCFF191DUY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 39.0 MB
ENCFF272ZVR.fastq fastq (reads) 888.2 MB
ENCFF395HUI.bam bam (alignments); assembly: hg19 913.7 MB
ENCFF745DZH.bam bam (alignments); assembly: GRCh38 927.7 MB
ENCFF801XSN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 40.0 MB
ENCFF816KHR.fastq fastq (reads) 815.4 MB
ENCSR735HOK ENCSR via encode_api

eCLIP experiment on HepG2 against YBX3

Homo sapiens
26 data files
FileTypeSize
ENCFF018RDR.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 23.3 MB
ENCFF070GQY.fastq fastq (reads) 830.2 MB
ENCFF075TIW.bed bed (peaks); assembly: hg19 49.0 KB
ENCFF124VAO.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF148DUH.bam bam (alignments); assembly: GRCh38 708.2 MB
ENCFF165UCU.bigBed bigBed (peaks); assembly: GRCh38 2.6 MB
ENCFF185OEI.bed bed (peaks); assembly: GRCh38 47.6 KB
ENCFF268SII.bed bed (peaks); assembly: hg19 1.4 MB
ENCFF311PHS.bed bed (peaks); assembly: GRCh38 1.4 MB
ENCFF331WIZ.bam bam (alignments); assembly: hg19 1019.5 MB
ENCFF401TWM.bed bed (peaks); assembly: GRCh38 1.6 MB
ENCFF428UJW.fastq fastq (reads) 960.0 MB
ENCFF560ZTA.bam bam (alignments); assembly: GRCh38 967.0 MB
ENCFF570XZG.bigBed bigBed (peaks); assembly: GRCh38 3.1 MB
ENCFF593QXS.fastq fastq (reads) 983.7 MB
ENCFF594XZD.fastq fastq (reads) 1.1 GB
ENCFF662AZS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 23.1 MB
ENCFF668DJX.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF730NOU.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 22.6 MB
ENCFF771LAD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 26.9 MB
ENCFF781YNK.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 27.2 MB
ENCFF827BCE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 23.8 MB
ENCFF843MHP.bam bam (alignments); assembly: hg19 732.1 MB
ENCFF893OBI.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 27.8 MB
ENCFF904UKX.bed bed (peaks); assembly: hg19 1.4 MB
ENCFF988EAZ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 26.3 MB
ENCSR647HOX ENCSR via encode_api

eCLIP experiment on HepG2 against HLTF

Homo sapiens
26 data files
FileTypeSize
ENCFF048FDF.bed bed (peaks); assembly: GRCh38 73.6 KB
ENCFF050VIB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 34.8 MB
ENCFF150BXG.fastq fastq (reads) 860.3 MB
ENCFF174WGM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 35.7 MB
ENCFF211XSC.bigBed bigBed (peaks); assembly: GRCh38 5.7 MB
ENCFF250KNJ.bed bed (peaks); assembly: hg19 2.9 MB
ENCFF252MTE.bed bed (peaks); assembly: GRCh38 2.9 MB
ENCFF255ZCV.fastq fastq (reads) 836.5 MB
ENCFF275AVL.bigBed bigBed (peaks); assembly: hg19 5.8 MB
ENCFF293ZZT.bam bam (alignments); assembly: GRCh38 748.7 MB
ENCFF364NWX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 35.9 MB
ENCFF410XHF.bed bed (peaks); assembly: hg19 71.8 KB
ENCFF414EIL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 34.7 MB
ENCFF435YXZ.bigBed bigBed (peaks); assembly: hg19 5.7 MB
ENCFF490MGU.bed bed (peaks); assembly: hg19 3.0 MB
ENCFF497PQA.bigBed bigBed (peaks); assembly: GRCh38 5.7 MB
ENCFF541TNR.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 37.2 MB
ENCFF552BMC.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 36.3 MB
ENCFF622ZDB.fastq fastq (reads) 690.3 MB
ENCFF748PZV.bam bam (alignments); assembly: hg19 773.4 MB
ENCFF757PDP.bam bam (alignments); assembly: GRCh38 722.9 MB
ENCFF773TEB.bam bam (alignments); assembly: hg19 758.6 MB
ENCFF803VYU.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 36.6 MB
ENCFF991OSY.bed bed (peaks); assembly: GRCh38 2.9 MB
ENCFF992EIC.fastq fastq (reads) 671.9 MB
ENCFF992HAM.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 36.5 MB
ENCSR825FTY ENCSR via encode_api

eCLIP control experiment on HepG2 against PCBP1

Homo sapiens
8 data files
FileTypeSize
ENCFF468VDU.fastq fastq (reads) 363.8 MB
ENCFF664HVC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 14.4 MB
ENCFF693OCX.fastq fastq (reads) 381.4 MB
ENCFF759UTZ.bam bam (alignments); assembly: GRCh38 345.7 MB
ENCFF768KXS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.5 MB
ENCFF852WIW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.1 MB
ENCFF931AYF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.0 MB
ENCFF935TUD.bam bam (alignments); assembly: hg19 339.1 MB
ENCSR111USM ENCSR via encode_api

eCLIP control experiment on K562 against SAFB

Homo sapiens
8 data files
FileTypeSize
ENCFF085YZL.fastq fastq (reads) 608.3 MB
ENCFF160TEI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 20.3 MB
ENCFF285HZG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 19.0 MB
ENCFF426DYM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 19.7 MB
ENCFF840WOP.bam bam (alignments); assembly: hg19 388.7 MB
ENCFF843CNP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 19.6 MB
ENCFF855ENR.fastq fastq (reads) 577.4 MB
ENCFF963HES.bam bam (alignments); assembly: GRCh38 399.3 MB
ENCSR322HHA ENCSR via encode_api

eCLIP experiment on HepG2 against TIAL1

Homo sapiens
26 data files
FileTypeSize
ENCFF062MYF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.1 MB
ENCFF078OCN.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF080ZJK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.1 MB
ENCFF089ZJS.bigBed bigBed (peaks); assembly: GRCh38 1.6 MB
ENCFF118ANT.bam bam (alignments); assembly: hg19 292.1 MB
ENCFF164ZGA.fastq fastq (reads) 220.3 MB
ENCFF253ZDJ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 15.5 MB
ENCFF297REJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 12.4 MB
ENCFF302ROS.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF387ZAH.bed bed (peaks); assembly: hg19 53.4 KB
ENCFF413UKK.bam bam (alignments); assembly: GRCh38 212.7 MB
ENCFF430UQQ.fastq fastq (reads) 246.9 MB
ENCFF456DAU.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF467UOO.bed bed (peaks); assembly: GRCh38 936.2 KB
ENCFF473IIG.bed bed (peaks); assembly: hg19 1001.8 KB
ENCFF513PTO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 15.3 MB
ENCFF612HOP.bed bed (peaks); assembly: GRCh38 51.9 KB
ENCFF613MXF.bigBed bigBed (peaks); assembly: GRCh38 2.0 MB
ENCFF620WSX.bam bam (alignments); assembly: hg19 228.1 MB
ENCFF624IBZ.bigBed bigBed (peaks); assembly: hg19 1.7 MB
ENCFF674HCV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.7 MB
ENCFF708YAL.fastq fastq (reads) 213.6 MB
ENCFF777OKN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.0 MB
ENCFF835AWK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 15.7 MB
ENCFF902OZA.bam bam (alignments); assembly: GRCh38 282.4 MB
ENCFF959XKN.fastq fastq (reads) 189.5 MB
ENCSR734ZHL ENCSR via encode_api

eCLIP experiment on K562 against UTP3

Homo sapiens
26 data files
FileTypeSize
ENCFF028GAJ.bed bed (peaks); assembly: GRCh38 472.0 B
ENCFF037SFC.fastq fastq (reads) 756.9 MB
ENCFF085FSS.fastq fastq (reads) 715.4 MB
ENCFF106YFV.bed bed (peaks); assembly: GRCh38 516.7 KB
ENCFF115DFJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 1.8 MB
ENCFF122OMX.bed bed (peaks); assembly: hg19 515.9 KB
ENCFF182NRE.bam bam (alignments); assembly: hg19 28.9 MB
ENCFF237VQW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 719.0 KB
ENCFF247UQF.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 1.7 MB
ENCFF306WLX.bigBed bigBed (peaks); assembly: hg19 1.0 MB
ENCFF317ALA.bam bam (alignments); assembly: hg19 13.2 MB
ENCFF363DGG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 764.2 KB
ENCFF484NSW.bed bed (peaks); assembly: GRCh38 860.1 KB
ENCFF584CAL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 715.9 KB
ENCFF584UPG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 766.5 KB
ENCFF612CUM.fastq fastq (reads) 356.5 MB
ENCFF612HAQ.bam bam (alignments); assembly: GRCh38 13.1 MB
ENCFF669GII.bigBed bigBed (peaks); assembly: GRCh38 1.0 MB
ENCFF683WHG.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 1.7 MB
ENCFF712PFK.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF739KMN.bed bed (peaks); assembly: hg19 863.1 KB
ENCFF762RZG.bigBed bigBed (peaks); assembly: GRCh38 1.6 MB
ENCFF826UUS.bam bam (alignments); assembly: GRCh38 28.4 MB
ENCFF832JDM.bed bed (peaks); assembly: hg19 561.0 B
ENCFF901ESA.fastq fastq (reads) 376.9 MB
ENCFF979FJC.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 1.8 MB
ENCSR183FVK ENCSR via encode_api

eCLIP control experiment on K562 against MATR3

Homo sapiens
8 data files
FileTypeSize
ENCFF230VBS.fastq fastq (reads) 280.5 MB
ENCFF245VHY.bam bam (alignments); assembly: hg19 228.4 MB
ENCFF323UFB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.3 MB
ENCFF366ILA.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.6 MB
ENCFF367ETI.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.8 MB
ENCFF401KWK.fastq fastq (reads) 279.7 MB
ENCFF431HEG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.1 MB
ENCFF691TZE.bam bam (alignments); assembly: GRCh38 236.3 MB
ENCSR154CSN ENCSR via encode_api

eCLIP experiment on K562 against DDX52

Homo sapiens
26 data files
FileTypeSize
ENCFF018JZA.fastq fastq (reads) 621.0 MB
ENCFF023FQH.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.9 MB
ENCFF036SXG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.3 MB
ENCFF059IMV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.9 MB
ENCFF121SHB.bed bed (peaks); assembly: GRCh38 940.4 KB
ENCFF198ULC.bed bed (peaks); assembly: GRCh38 25.5 KB
ENCFF328GNH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.4 MB
ENCFF343EUG.bed bed (peaks); assembly: hg19 958.2 KB
ENCFF354DPT.bam bam (alignments); assembly: hg19 188.7 MB
ENCFF508LHH.bed bed (peaks); assembly: GRCh38 796.2 KB
ENCFF529NNX.bam bam (alignments); assembly: GRCh38 182.8 MB
ENCFF533ART.fastq fastq (reads) 441.9 MB
ENCFF535QEG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.7 MB
ENCFF586YIZ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.7 MB
ENCFF592QGC.fastq fastq (reads) 457.4 MB
ENCFF636YLN.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF687HMY.bigBed bigBed (peaks); assembly: GRCh38 1.4 MB
ENCFF698DHB.bam bam (alignments); assembly: hg19 196.4 MB
ENCFF716JEM.bigBed bigBed (peaks); assembly: hg19 1.5 MB
ENCFF729XQQ.bam bam (alignments); assembly: GRCh38 184.7 MB
ENCFF794QAR.fastq fastq (reads) 594.9 MB
ENCFF818KZJ.bed bed (peaks); assembly: hg19 841.6 KB
ENCFF851VGO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.3 MB
ENCFF881DWJ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.9 MB
ENCFF888SME.bed bed (peaks); assembly: hg19 25.7 KB
ENCFF918MTI.bigBed bigBed (peaks); assembly: GRCh38 1.6 MB
ENCSR716AKC ENCSR via encode_api

eCLIP control experiment on HepG2 against AQR

Homo sapiens
8 data files
FileTypeSize
ENCFF215CWH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 22.7 MB
ENCFF217IZI.bam bam (alignments); assembly: GRCh38 488.8 MB
ENCFF234PQJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 22.7 MB
ENCFF547VBL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.9 MB
ENCFF673RJW.bam bam (alignments); assembly: hg19 449.2 MB
ENCFF746PPV.fastq fastq (reads) 996.1 MB
ENCFF862RKC.fastq fastq (reads) 1.0 GB
ENCFF901VMX.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 20.9 MB
ENCSR876EYA ENCSR via encode_api

eCLIP experiment on HepG2 against BCLAF1

Homo sapiens
26 data files
FileTypeSize
ENCFF033JHH.fastq fastq (reads) 569.9 MB
ENCFF094BEK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 30.1 MB
ENCFF136WMY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 29.8 MB
ENCFF139XGO.bam bam (alignments); assembly: hg19 704.7 MB
ENCFF274RUU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 21.9 MB
ENCFF324DAY.bigBed bigBed (peaks); assembly: hg19 4.1 MB
ENCFF355PUZ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 21.2 MB
ENCFF376EDQ.bam bam (alignments); assembly: hg19 463.1 MB
ENCFF463HOI.fastq fastq (reads) 319.5 MB
ENCFF490SCE.fastq fastq (reads) 572.4 MB
ENCFF510PFS.bam bam (alignments); assembly: GRCh38 450.7 MB
ENCFF620THE.bigBed bigBed (peaks); assembly: GRCh38 5.0 MB
ENCFF662YRG.bigBed bigBed (peaks); assembly: hg19 4.9 MB
ENCFF673LOJ.bam bam (alignments); assembly: GRCh38 676.7 MB
ENCFF691JPV.bed bed (peaks); assembly: hg19 2.1 MB
ENCFF695FAB.fastq fastq (reads) 324.1 MB
ENCFF723VKJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 29.1 MB
ENCFF763JKN.bigBed bigBed (peaks); assembly: GRCh38 4.1 MB
ENCFF797YXM.bed bed (peaks); assembly: GRCh38 2.1 MB
ENCFF810EUA.bed bed (peaks); assembly: GRCh38 728.0 KB
ENCFF829FER.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 29.4 MB
ENCFF837DWG.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 21.5 MB
ENCFF858HBB.bed bed (peaks); assembly: hg19 2.6 MB
ENCFF919WGD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 22.0 MB
ENCFF930HHV.bed bed (peaks); assembly: hg19 731.3 KB
ENCFF936QEL.bed bed (peaks); assembly: GRCh38 2.6 MB
ENCSR251FMT ENCSR via encode_api

eCLIP control experiment on K562 against GRWD1

Homo sapiens
8 data files
FileTypeSize
ENCFF214CCK.fastq fastq (reads) 575.4 MB
ENCFF353TXG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.2 MB
ENCFF398EKK.fastq fastq (reads) 559.3 MB
ENCFF553CRA.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.4 MB
ENCFF562TVO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.8 MB
ENCFF727JVX.bam bam (alignments); assembly: GRCh38 232.2 MB
ENCFF811ULI.bam bam (alignments); assembly: hg19 230.4 MB
ENCFF984SWE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.7 MB
ENCSR069EVH ENCSR via encode_api

eCLIP experiment on K562 against FUS

Homo sapiens
26 data files
FileTypeSize
ENCFF079PJI.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 47.6 MB
ENCFF113CHP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 40.7 MB
ENCFF210ZRQ.bam bam (alignments); assembly: GRCh38 1.1 GB
ENCFF297CPZ.bam bam (alignments); assembly: hg19 1.2 GB
ENCFF307BRQ.fastq fastq (reads) 1.2 GB
ENCFF336ZEJ.fastq fastq (reads) 1.0 GB
ENCFF341YQM.bam bam (alignments); assembly: GRCh38 946.9 MB
ENCFF362UCS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 43.4 MB
ENCFF364FLH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 39.5 MB
ENCFF390SKN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 38.8 MB
ENCFF443KJS.bed bed (peaks); assembly: GRCh38 2.1 MB
ENCFF446LST.bed bed (peaks); assembly: hg19 2.1 MB
ENCFF476CZI.bigBed bigBed (peaks); assembly: hg19 3.9 MB
ENCFF549AQN.bigBed bigBed (peaks); assembly: GRCh38 4.3 MB
ENCFF553EEX.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 37.7 MB
ENCFF554AWP.fastq fastq (reads) 1.2 GB
ENCFF565ILV.bed bed (peaks); assembly: GRCh38 2.3 MB
ENCFF588UCW.bigBed bigBed (peaks); assembly: hg19 4.4 MB
ENCFF674POL.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 45.4 MB
ENCFF763LLF.bam bam (alignments); assembly: hg19 987.5 MB
ENCFF764SZR.bed bed (peaks); assembly: hg19 2.3 MB
ENCFF777FHS.bed bed (peaks); assembly: hg19 96.3 KB
ENCFF780JIH.bigBed bigBed (peaks); assembly: GRCh38 3.9 MB
ENCFF841ZLV.fastq fastq (reads) 1.4 GB
ENCFF861KMV.bed bed (peaks); assembly: GRCh38 99.1 KB
ENCFF871EJX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 45.5 MB
ENCSR820UYE ENCSR via encode_api

eCLIP experiment on HepG2 against PABPN1

Homo sapiens
26 data files
FileTypeSize
ENCFF009PZB.fastq fastq (reads) 419.3 MB
ENCFF028AVQ.bigBed bigBed (peaks); assembly: GRCh38 2.5 MB
ENCFF049DAF.fastq fastq (reads) 522.4 MB
ENCFF107VBS.bigBed bigBed (peaks); assembly: hg19 2.6 MB
ENCFF145LAD.bam bam (alignments); assembly: GRCh38 317.1 MB
ENCFF185CCB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 15.7 MB
ENCFF190DLZ.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF441BOM.bam bam (alignments); assembly: hg19 337.7 MB
ENCFF482ULC.fastq fastq (reads) 492.4 MB
ENCFF544SIB.bigBed bigBed (peaks); assembly: GRCh38 2.0 MB
ENCFF615GBE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 16.7 MB
ENCFF709FEU.bed bed (peaks); assembly: GRCh38 87.8 KB
ENCFF715LJJ.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF755RZB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 16.7 MB
ENCFF767IPH.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 16.4 MB
ENCFF805VZB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.1 MB
ENCFF831ZJY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 15.8 MB
ENCFF878GRC.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 17.0 MB
ENCFF890DJI.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF922VHA.bam bam (alignments); assembly: hg19 369.6 MB
ENCFF927DMJ.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF937NJC.fastq fastq (reads) 448.1 MB
ENCFF974AOE.bam bam (alignments); assembly: GRCh38 358.1 MB
ENCFF975HKC.bed bed (peaks); assembly: hg19 88.1 KB
ENCFF978BHG.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF996QBV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 16.3 MB
ENCSR586DGV ENCSR via encode_api

eCLIP experiment on K562 against ZNF800

Homo sapiens
26 data files
FileTypeSize
ENCFF009EJC.fastq fastq (reads) 843.8 MB
ENCFF028XAW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.5 MB
ENCFF105HMJ.bed bed (peaks); assembly: GRCh38 54.9 KB
ENCFF126RXG.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF270YPL.bam bam (alignments); assembly: hg19 131.2 MB
ENCFF303MEM.bam bam (alignments); assembly: hg19 189.4 MB
ENCFF334TXK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 9.6 MB
ENCFF338YTK.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.5 MB
ENCFF348CSA.bigBed bigBed (peaks); assembly: hg19 1.8 MB
ENCFF417BRA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.7 MB
ENCFF420ZEI.bam bam (alignments); assembly: GRCh38 184.4 MB
ENCFF425RIV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.3 MB
ENCFF579NNP.bed bed (peaks); assembly: hg19 54.3 KB
ENCFF631INY.fastq fastq (reads) 533.4 MB
ENCFF642EHH.fastq fastq (reads) 719.1 MB
ENCFF672MYG.bed bed (peaks); assembly: GRCh38 871.1 KB
ENCFF673MQR.bigBed bigBed (peaks); assembly: GRCh38 1.8 MB
ENCFF693MLV.bam bam (alignments); assembly: GRCh38 123.6 MB
ENCFF710MTZ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.5 MB
ENCFF732MSM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.0 MB
ENCFF737BYL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.3 MB
ENCFF737XQX.fastq fastq (reads) 442.0 MB
ENCFF780IYG.bed bed (peaks); assembly: GRCh38 610.8 KB
ENCFF787LVR.bed bed (peaks); assembly: hg19 872.2 KB
ENCFF806GQI.bed bed (peaks); assembly: hg19 632.1 KB
ENCFF947GNX.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCSR839KAX ENCSR via encode_api

eCLIP control experiment on HepG2 against FAM120A

Homo sapiens
8 data files
FileTypeSize
ENCFF079HLW.bigWig bigWig (minus strand signal of unique reads) 22.0 MB
ENCFF186RBL.bam bam (alignments) 490.4 MB
ENCFF333KJO.bam bam (alignments) 488.1 MB
ENCFF341HEH.bigWig bigWig (minus strand signal of unique reads) 21.9 MB
ENCFF611TNV.bigWig bigWig (plus strand signal of unique reads) 22.6 MB
ENCFF626CNS.bigWig bigWig (plus strand signal of unique reads) 22.7 MB
ENCFF869DFG.fastq fastq (reads) 632.8 MB
ENCFF903ZBT.fastq fastq (reads) 626.6 MB
ENCSR038TMA ENCSR via encode_api

eCLIP control experiment on K562 against SBDS

Homo sapiens
8 data files
FileTypeSize
ENCFF014PFO.bigWig bigWig (plus strand signal of unique reads) 6.7 MB
ENCFF058ZJG.bigWig bigWig (minus strand signal of unique reads) 6.5 MB
ENCFF270EUA.fastq fastq (reads) 325.0 MB
ENCFF310FMZ.bam bam (alignments) 157.4 MB
ENCFF397TYS.fastq fastq (reads) 353.1 MB
ENCFF541LWG.bigWig bigWig (minus strand signal of unique reads) 6.5 MB
ENCFF600AGC.bam bam (alignments) 158.3 MB
ENCFF617GDR.bigWig bigWig (plus strand signal of unique reads) 6.8 MB
ENCSR197NFH ENCSR via encode_api

eCLIP control experiment on K562 against KHDRBS1

Homo sapiens
8 data files
FileTypeSize
ENCFF103MMX.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCFF351LXK.bigWig bigWig (plus strand signal of unique reads) 20.2 MB
ENCFF413EEC.fastq fastq (reads) 577.1 MB
ENCFF721FKR.bam bam (alignments) 401.7 MB
ENCFF810KLH.bigWig bigWig (minus strand signal of unique reads) 19.5 MB
ENCFF846HLE.bigWig bigWig (plus strand signal of unique reads) 20.3 MB
ENCFF931YGS.bam bam (alignments) 402.7 MB
ENCFF949DMR.fastq fastq (reads) 515.3 MB
ENCSR115GAA ENCSR via encode_api

eCLIP control experiment on HepG2 against PCBP2

Homo sapiens
8 data files
FileTypeSize
ENCFF107SOW.bigWig bigWig (plus strand signal of unique reads) 20.8 MB
ENCFF124RDW.bam bam (alignments) 468.4 MB
ENCFF130FRI.fastq fastq (reads) 484.6 MB
ENCFF190ITO.bam bam (alignments) 472.7 MB
ENCFF549RZP.bigWig bigWig (plus strand signal of unique reads) 20.6 MB
ENCFF736TLU.bigWig bigWig (minus strand signal of unique reads) 20.5 MB
ENCFF753RZO.bigWig bigWig (minus strand signal of unique reads) 20.3 MB
ENCFF837BRE.fastq fastq (reads) 535.2 MB
ENCSR468ZQA ENCSR via encode_api

eCLIP control experiment on K562 against NPM1

Homo sapiens
8 data files
FileTypeSize
ENCFF040BAA.fastq fastq (reads) 490.3 MB
ENCFF062ETM.bam bam (alignments) 263.3 MB
ENCFF209VJW.fastq fastq (reads) 433.1 MB
ENCFF240BEY.bigWig bigWig (minus strand signal of unique reads) 14.1 MB
ENCFF494JUE.bam bam (alignments) 263.4 MB
ENCFF607JJN.bigWig bigWig (plus strand signal of unique reads) 14.7 MB
ENCFF655PPJ.bigWig bigWig (plus strand signal of unique reads) 14.7 MB
ENCFF850UAL.bigWig bigWig (minus strand signal of unique reads) 14.2 MB
ENCSR197LHH ENCSR via encode_api

eCLIP control experiment on HepG2 against DKC1

Homo sapiens
8 data files
FileTypeSize
ENCFF038LJH.bam bam (alignments) 810.9 MB
ENCFF072TXJ.bigWig bigWig (minus strand signal of unique reads) 33.7 MB
ENCFF144DTF.bigWig bigWig (plus strand signal of unique reads) 35.5 MB
ENCFF248PBA.bigWig bigWig (plus strand signal of unique reads) 34.9 MB
ENCFF734WRT.fastq fastq (reads) 906.1 MB
ENCFF742BDR.bigWig bigWig (minus strand signal of unique reads) 34.3 MB
ENCFF793DFG.fastq fastq (reads) 964.5 MB
ENCFF973XJS.bam bam (alignments) 793.5 MB
ENCSR745BIL ENCSR via encode_api

eCLIP control experiment on HepG2 against RPS3

Homo sapiens
8 data files
FileTypeSize
ENCFF457ZQN.fastq fastq (reads) 724.9 MB
ENCFF643YNL.bigWig bigWig (plus strand signal of unique reads) 22.3 MB
ENCFF708TVU.bam bam (alignments) 509.4 MB
ENCFF742RVI.bigWig bigWig (plus strand signal of unique reads) 22.8 MB
ENCFF774LCM.bigWig bigWig (minus strand signal of unique reads) 22.3 MB
ENCFF779VXI.fastq fastq (reads) 685.6 MB
ENCFF822KTZ.bigWig bigWig (minus strand signal of unique reads) 21.8 MB
ENCFF905UMJ.bam bam (alignments) 520.0 MB
ENCSR182AEG ENCSR via encode_api

eCLIP control experiment on HepG2 against AGGF1

Homo sapiens
8 data files
FileTypeSize
ENCFF024AYU.bigWig bigWig (minus strand signal of unique reads) 24.2 MB
ENCFF070DMZ.bam bam (alignments) 527.6 MB
ENCFF249LAM.bigWig bigWig (plus strand signal of unique reads) 25.4 MB
ENCFF360FFH.bigWig bigWig (minus strand signal of unique reads) 24.7 MB
ENCFF506IYH.bam bam (alignments) 516.6 MB
ENCFF782ZJI.fastq fastq (reads) 568.5 MB
ENCFF794KAP.fastq fastq (reads) 606.3 MB
ENCFF827XRY.bigWig bigWig (plus strand signal of unique reads) 25.0 MB
ENCSR708TCY ENCSR via encode_api

eCLIP control experiment on HepG2 against TAF15

Homo sapiens
8 data files
FileTypeSize
ENCFF021MCC.bigWig bigWig (minus strand signal of unique reads) 23.9 MB
ENCFF062LCG.bam bam (alignments) 533.2 MB
ENCFF612XKJ.fastq fastq (reads) 478.9 MB
ENCFF726CWG.bigWig bigWig (plus strand signal of unique reads) 24.1 MB
ENCFF743PLU.bam bam (alignments) 523.4 MB
ENCFF832HQP.fastq fastq (reads) 544.3 MB
ENCFF877MRP.bigWig bigWig (minus strand signal of unique reads) 23.5 MB
ENCFF901PLK.bigWig bigWig (plus strand signal of unique reads) 24.5 MB
ENCSR502NKG ENCSR via encode_api

eCLIP control experiment on K562 against HLTF

Homo sapiens
8 data files
FileTypeSize
ENCFF065NRW.bigWig bigWig (plus strand signal of unique reads) 5.3 MB
ENCFF089OYZ.fastq fastq (reads) 443.8 MB
ENCFF290SQA.bigWig bigWig (minus strand signal of unique reads) 4.7 MB
ENCFF568BOI.bam bam (alignments) 116.8 MB
ENCFF615TJD.bam bam (alignments) 106.5 MB
ENCFF767CEO.fastq fastq (reads) 521.1 MB
ENCFF936DLT.bigWig bigWig (minus strand signal of unique reads) 5.2 MB
ENCFF998IZZ.bigWig bigWig (plus strand signal of unique reads) 4.9 MB
ENCSR756NPZ ENCSR via encode_api

eCLIP control experiment on HepG2 against EIF3H

Homo sapiens
8 data files
FileTypeSize
ENCFF183PTD.fastq fastq (reads) 740.0 MB
ENCFF204HYV.bam bam (alignments) 488.0 MB
ENCFF540GQS.bigWig bigWig (minus strand signal of unique reads) 20.5 MB
ENCFF597DVX.bigWig bigWig (plus strand signal of unique reads) 20.6 MB
ENCFF730KZH.bigWig bigWig (plus strand signal of unique reads) 21.2 MB
ENCFF768OOI.bigWig bigWig (minus strand signal of unique reads) 19.9 MB
ENCFF901JEH.fastq fastq (reads) 695.7 MB
ENCFF984JIA.bam bam (alignments) 474.7 MB
ENCSR114XBO ENCSR via encode_api

eCLIP control experiment on HepG2 against LSM11

Homo sapiens
8 data files
FileTypeSize
ENCFF016TIF.bam bam (alignments) 394.7 MB
ENCFF048KEF.bigWig bigWig (minus strand signal of unique reads) 18.0 MB
ENCFF077TSP.bigWig bigWig (plus strand signal of unique reads) 17.9 MB
ENCFF156KLS.bam bam (alignments) 405.4 MB
ENCFF222QDD.bigWig bigWig (minus strand signal of unique reads) 17.5 MB
ENCFF356BGH.fastq fastq (reads) 681.6 MB
ENCFF369YVX.fastq fastq (reads) 659.0 MB
ENCFF944HQO.bigWig bigWig (plus strand signal of unique reads) 18.4 MB
ENCSR499ZCU ENCSR via encode_api

eCLIP control experiment on HepG2 against SRSF1

Homo sapiens
8 data files
FileTypeSize
ENCFF241ORF.bigWig bigWig (plus strand signal of unique reads) 9.6 MB
ENCFF294BNR.bigWig bigWig (plus strand signal of unique reads) 9.7 MB
ENCFF445NNG.bam bam (alignments) 197.3 MB
ENCFF467FPH.bam bam (alignments) 197.8 MB
ENCFF614VTZ.fastq fastq (reads) 355.8 MB
ENCFF711WPF.bigWig bigWig (minus strand signal of unique reads) 9.4 MB
ENCFF773PUP.bigWig bigWig (minus strand signal of unique reads) 9.4 MB
ENCFF831COI.fastq fastq (reads) 361.1 MB
ENCSR886YYD ENCSR via encode_api

eCLIP control experiment on HepG2 against SF3B4

Homo sapiens
8 data files
FileTypeSize
ENCFF072CLZ.bam bam (alignments) 122.6 MB
ENCFF270IHA.bigWig bigWig (plus strand signal of unique reads) 6.0 MB
ENCFF347FPD.bigWig bigWig (minus strand signal of unique reads) 5.8 MB
ENCFF477FYI.bigWig bigWig (plus strand signal of unique reads) 6.1 MB
ENCFF673XBX.fastq fastq (reads) 391.7 MB
ENCFF772NLB.fastq fastq (reads) 396.3 MB
ENCFF783VBB.bigWig bigWig (minus strand signal of unique reads) 5.9 MB
ENCFF976CQJ.bam bam (alignments) 120.9 MB
ENCSR399CBP ENCSR via encode_api

eCLIP control experiment on K562 against LIN28B

Homo sapiens
8 data files
FileTypeSize
ENCFF064SDM.fastq fastq (reads) 325.2 MB
ENCFF237XYU.bigWig bigWig (plus strand signal of unique reads) 9.7 MB
ENCFF431MOD.bigWig bigWig (minus strand signal of unique reads) 7.1 MB
ENCFF760WXW.bigWig bigWig (minus strand signal of unique reads) 9.2 MB
ENCFF846MTA.bigWig bigWig (plus strand signal of unique reads) 9.6 MB
ENCFF870VFV.fastq fastq (reads) 325.9 MB
ENCFF981KYA.bam bam (alignments) 178.7 MB
ENCFF999MGM.bam bam (alignments) 180.2 MB
ENCSR615AAW ENCSR via encode_api

eCLIP control experiment on K562 against QKI

Homo sapiens
8 data files
FileTypeSize
ENCFF070RME.bam bam (alignments) 427.5 MB
ENCFF100KVV.bigWig bigWig (plus strand signal of unique reads) 20.4 MB
ENCFF296LXE.bigWig bigWig (plus strand signal of unique reads) 20.7 MB
ENCFF362AGG.bigWig bigWig (minus strand signal of unique reads) 20.0 MB
ENCFF430SHW.bigWig bigWig (minus strand signal of unique reads) 19.7 MB
ENCFF620NEF.fastq fastq (reads) 682.5 MB
ENCFF647NVG.fastq fastq (reads) 653.0 MB
ENCFF849FKQ.bam bam (alignments) 420.7 MB
ENCSR129SCO ENCSR via encode_api

eCLIP control experiment on HepG2 against POLR2G

Homo sapiens
8 data files
FileTypeSize
ENCFF037ZLK.bigWig bigWig (minus strand signal of unique reads) 12.8 MB
ENCFF054YWG.bam bam (alignments) 279.4 MB
ENCFF159BTI.bigWig bigWig (minus strand signal of unique reads) 12.9 MB
ENCFF365RSB.fastq fastq (reads) 513.8 MB
ENCFF431HUP.bam bam (alignments) 283.0 MB
ENCFF534IGJ.fastq fastq (reads) 506.6 MB
ENCFF584MHO.bigWig bigWig (plus strand signal of unique reads) 13.1 MB
ENCFF781RJS.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCSR777PDA ENCSR via encode_api

eCLIP control experiment on HepG2 against BUD13

Homo sapiens
8 data files
FileTypeSize
ENCFF475DWO.bigWig bigWig (minus strand signal of unique reads) 43.3 MB
ENCFF492HFL.bigWig bigWig (plus strand signal of unique reads) 44.4 MB
ENCFF582HAW.fastq fastq (reads) 1.0 GB
ENCFF599CTL.bigWig bigWig (minus strand signal of unique reads) 44.1 MB
ENCFF624JXG.bam bam (alignments) 1.0 GB
ENCFF705VUW.bigWig bigWig (plus strand signal of unique reads) 45.2 MB
ENCFF908SIL.fastq fastq (reads) 1.1 GB
ENCFF977BAJ.bam bam (alignments) 1.1 GB
ENCSR145PHJ ENCSR via encode_api

eCLIP control experiment on K562 against SRSF7

Homo sapiens
8 data files
FileTypeSize
ENCFF182OOU.bam bam (alignments) 103.2 MB
ENCFF228PTY.bigWig bigWig (plus strand signal of unique reads) 4.9 MB
ENCFF294TTP.bam bam (alignments) 106.7 MB
ENCFF394FLG.fastq fastq (reads) 220.2 MB
ENCFF671HVM.bigWig bigWig (minus strand signal of unique reads) 4.7 MB
ENCFF770WMT.fastq fastq (reads) 197.4 MB
ENCFF916NEJ.bigWig bigWig (minus strand signal of unique reads) 4.5 MB
ENCFF983ZVX.bigWig bigWig (plus strand signal of unique reads) 4.7 MB
ENCSR550SGC ENCSR via encode_api

eCLIP control experiment on K562 against AKAP8L

Homo sapiens
8 data files
FileTypeSize
ENCFF013ZUT.bam bam (alignments) 560.5 MB
ENCFF057WTV.bam bam (alignments) 547.1 MB
ENCFF201GQO.bigWig bigWig (minus strand signal of unique reads) 25.9 MB
ENCFF533NOD.bigWig bigWig (plus strand signal of unique reads) 26.7 MB
ENCFF534UAZ.fastq fastq (reads) 584.7 MB
ENCFF635VSR.bigWig bigWig (plus strand signal of unique reads) 26.1 MB
ENCFF670KXN.bigWig bigWig (minus strand signal of unique reads) 25.3 MB
ENCFF741GZP.fastq fastq (reads) 623.7 MB
ENCSR910LAN ENCSR via encode_api

eCLIP control experiment on K562 against AGGF1

Homo sapiens
8 data files
FileTypeSize
ENCFF132SLV.bam bam (alignments) 711.8 MB
ENCFF418JXF.bigWig bigWig (plus strand signal of unique reads) 33.5 MB
ENCFF469LMX.bigWig bigWig (plus strand signal of unique reads) 33.0 MB
ENCFF528CLV.bigWig bigWig (minus strand signal of unique reads) 32.5 MB
ENCFF590BBN.bigWig bigWig (minus strand signal of unique reads) 32.0 MB
ENCFF725ITK.fastq fastq (reads) 669.0 MB
ENCFF764ZUP.bam bam (alignments) 701.0 MB
ENCFF934XSG.fastq fastq (reads) 627.7 MB
ENCSR750NTM ENCSR via encode_api

eCLIP control experiment on K562 against METAP2

Homo sapiens
8 data files
FileTypeSize
ENCFF058UPC.bigWig bigWig (minus strand signal of unique reads) 16.7 MB
ENCFF222NYJ.bam bam (alignments) 380.2 MB
ENCFF223RIV.bigWig bigWig (plus strand signal of unique reads) 17.3 MB
ENCFF591UZM.fastq fastq (reads) 560.4 MB
ENCFF671UJO.bigWig bigWig (minus strand signal of unique reads) 17.2 MB
ENCFF832UNJ.fastq fastq (reads) 569.6 MB
ENCFF942TNV.bam bam (alignments) 370.7 MB
ENCFF987PYU.bigWig bigWig (plus strand signal of unique reads) 17.8 MB
ENCSR978JXM ENCSR via encode_api

eCLIP control experiment on K562 against SAFB2

Homo sapiens
8 data files
FileTypeSize
ENCFF140UJJ.bam bam (alignments) 421.4 MB
ENCFF150YLM.bigWig bigWig (plus strand signal of unique reads) 22.0 MB
ENCFF267IFC.bigWig bigWig (minus strand signal of unique reads) 21.2 MB
ENCFF387LLC.bigWig bigWig (minus strand signal of unique reads) 21.3 MB
ENCFF576HVU.bigWig bigWig (plus strand signal of unique reads) 22.0 MB
ENCFF598NHN.fastq fastq (reads) 569.2 MB
ENCFF698YHW.fastq fastq (reads) 592.3 MB
ENCFF842FRH.bam bam (alignments) 423.8 MB
ENCSR829SLO ENCSR via encode_api

eCLIP control experiment on K562 against HNRNPU

Homo sapiens
8 data files
FileTypeSize
ENCFF086LQU.bigWig bigWig (plus strand signal of unique reads) 20.8 MB
ENCFF188FGR.bam bam (alignments) 345.5 MB
ENCFF300GEY.fastq fastq (reads) 391.1 MB
ENCFF390OAO.bigWig bigWig (minus strand signal of unique reads) 19.7 MB
ENCFF425BFI.bigWig bigWig (plus strand signal of unique reads) 20.6 MB
ENCFF487SZW.fastq fastq (reads) 409.7 MB
ENCFF590BEJ.bigWig bigWig (minus strand signal of unique reads) 19.8 MB
ENCFF710NVK.bam bam (alignments) 344.3 MB
ENCSR333PZV ENCSR via encode_api

eCLIP control experiment on HepG2 against TIA1

Homo sapiens
8 data files
FileTypeSize
ENCFF048JJS.bigWig bigWig (minus strand signal of unique reads) 6.5 MB
ENCFF269QNL.bam bam (alignments) 157.3 MB
ENCFF482VTM.bam bam (alignments) 154.0 MB
ENCFF625OCH.bigWig bigWig (plus strand signal of unique reads) 6.7 MB
ENCFF678FPJ.fastq fastq (reads) 346.6 MB
ENCFF805EWQ.fastq fastq (reads) 333.7 MB
ENCFF818TBT.bigWig bigWig (plus strand signal of unique reads) 6.5 MB
ENCFF854LHZ.bigWig bigWig (minus strand signal of unique reads) 6.3 MB
ENCSR049GND ENCSR via encode_api

eCLIP control experiment on HepG2 against U2AF2

Homo sapiens
8 data files
FileTypeSize
ENCFF045UZN.bam bam (alignments) 725.7 MB
ENCFF154OPM.bigWig bigWig (minus strand signal of unique reads) 32.2 MB
ENCFF156ZDE.fastq fastq (reads) 575.8 MB
ENCFF327HWM.bigWig bigWig (plus strand signal of unique reads) 33.1 MB
ENCFF566CFJ.bigWig bigWig (minus strand signal of unique reads) 32.5 MB
ENCFF825YLL.bam bam (alignments) 729.7 MB
ENCFF939YLN.fastq fastq (reads) 544.8 MB
ENCFF989JBA.bigWig bigWig (plus strand signal of unique reads) 33.3 MB
ENCSR212ILN ENCSR via encode_api

eCLIP control experiment on K562 against HNRNPM

Homo sapiens
8 data files
FileTypeSize
ENCFF018ESM.fastq fastq (reads) 278.2 MB
ENCFF030ZRP.bam bam (alignments) 209.9 MB
ENCFF081LPZ.bigWig bigWig (minus strand signal of unique reads) 12.3 MB
ENCFF295DVP.bigWig bigWig (minus strand signal of unique reads) 12.3 MB
ENCFF340UMQ.bigWig bigWig (plus strand signal of unique reads) 12.9 MB
ENCFF532ADX.bam bam (alignments) 210.7 MB
ENCFF589IKK.fastq fastq (reads) 262.3 MB
ENCFF731UYI.bigWig bigWig (plus strand signal of unique reads) 13.0 MB
ENCSR898ZCL ENCSR via encode_api

eCLIP control experiment on K562 against HNRNPA1

Homo sapiens
8 data files
FileTypeSize
ENCFF104FVH.bigWig bigWig (minus strand signal of unique reads) 13.6 MB
ENCFF335HAD.bam bam (alignments) 236.6 MB
ENCFF394YGE.bigWig bigWig (plus strand signal of unique reads) 14.3 MB
ENCFF494XRE.bam bam (alignments) 237.6 MB
ENCFF603XVE.bigWig bigWig (minus strand signal of unique reads) 13.5 MB
ENCFF671JKV.bigWig bigWig (plus strand signal of unique reads) 14.2 MB
ENCFF872NAM.fastq fastq (reads) 424.4 MB
ENCFF895XZY.fastq fastq (reads) 442.7 MB
ENCSR756CKJ ENCSR via encode_api

eCLIP experiment on K562 against RBFOX2

Homo sapiens
34 data files
FileTypeSize
ENCFF076RDA.bed bed (peaks) 3.3 MB
ENCFF087GDX.bigWig bigWig (plus strand signal of unique reads) 23.0 MB
ENCFF101WQW.bed bed (peaks) 817.5 KB
ENCFF158LBM.bigWig bigWig (minus strand signal of unique reads) 36.0 MB
ENCFF163QEA.fastq fastq (reads) 418.3 MB
ENCFF174SUY.bigBed bigBed (peaks) 1.5 MB
ENCFF179IVJ.bigWig bigWig (plus strand signal of unique reads) 23.9 MB
ENCFF184NZT.bigBed bigBed (peaks) 4.3 MB
ENCFF190GZC.bigWig bigWig (minus strand signal of unique reads) 36.9 MB
ENCFF206RIM.bed bed (peaks) 79.8 KB
ENCFF217YVY.bigBed bigBed (peaks) 671.6 KB
ENCFF220WYH.bigBed bigBed (peaks) 1.6 MB
ENCFF228FGP.bigBed bigBed (peaks) 6.0 MB
ENCFF236LVL.bigWig bigWig (plus strand signal of unique reads) 38.5 MB
ENCFF249RTF.bam bam (alignments) 440.3 MB
ENCFF295CNS.bigBed bigBed (peaks) 604.0 KB
ENCFF296GDR.bam bam (alignments) 417.7 MB
ENCFF347YVH.bigBed bigBed (peaks) 6.0 MB
ENCFF426AYZ.bed bed (peaks) 272.3 KB
ENCFF462CMF.fastq fastq (reads) 646.3 MB
ENCFF474SIP.bed bed (peaks) 224.0 KB
ENCFF537RYR.bam bam (alignments) 774.9 MB
ENCFF541AUT.bigWig bigWig (plus strand signal of unique reads) 37.5 MB
ENCFF582WWR.bed bed (peaks) 78.9 KB
ENCFF617JKI.bigWig bigWig (minus strand signal of unique reads) 21.7 MB
ENCFF654XPT.bam bam (alignments) 803.4 MB
ENCFF679UXV.bigWig bigWig (minus strand signal of unique reads) 22.8 MB
ENCFF779OIO.bed bed (peaks) 2.2 MB
ENCFF801MDI.bigBed bigBed (peaks) 4.3 MB
ENCFF832SRM.bed bed (peaks) 677.3 KB
ENCFF910WLP.bed bed (peaks) 3.2 MB
ENCFF930TLO.fastq fastq (reads) 628.2 MB
ENCFF942TPA.fastq fastq (reads) 424.0 MB
ENCFF994PFX.bed bed (peaks) 2.2 MB
ENCSR893EFU ENCSR via encode_api

eCLIP experiment on K562 against DDX6

Homo sapiens
36 data files
FileTypeSize
ENCFF021PYN.bigBed bigBed (peaks) 2.2 MB
ENCFF024VZT.fastq fastq (reads) 581.3 MB
ENCFF037HOV.bigBed bigBed (peaks) 1.6 MB
ENCFF061BRI.bigBed bigBed (peaks) 2.5 MB
ENCFF082NYI.bigWig bigWig (plus strand signal of unique reads) 6.2 MB
ENCFF142GNL.bigWig bigWig (plus strand signal of unique reads) 16.8 MB
ENCFF159GZL.bigWig bigWig (minus strand signal of unique reads) 16.1 MB
ENCFF163DCH.fastq fastq (reads) 595.0 MB
ENCFF182NMK.bed bed (peaks) 615.2 KB
ENCFF234TZD.bigWig bigWig (minus strand signal of unique reads) 5.8 MB
ENCFF242MDU.bam bam (alignments) 299.5 MB
ENCFF259KOV.fastq fastq (reads) 668.2 MB
ENCFF278AZV.bigWig bigWig (minus strand signal of unique reads) 15.9 MB
ENCFF312AIG.bigBed bigBed (peaks) 1.5 MB
ENCFF457JWB.bam bam (alignments) 127.2 MB
ENCFF515CUN.bam bam (alignments) 123.9 MB
ENCFF590NER.bigBed bigBed (peaks) 3.5 MB
ENCFF608UGQ.bed bed (peaks) 1.7 MB
ENCFF616LVU.bigBed bigBed (peaks) 710.9 KB
ENCFF625EKI.bigWig bigWig (plus strand signal of unique reads) 6.0 MB
ENCFF626UUD.bed bed (peaks) 923.2 KB
ENCFF641YMG.bed bed (peaks) 773.1 KB
ENCFF662STV.bigWig bigWig (plus strand signal of unique reads) 17.1 MB
ENCFF682QWG.bed bed (peaks) 287.7 KB
ENCFF719LRT.bigBed bigBed (peaks) 548.4 KB
ENCFF747NRM.bed bed (peaks) 909.7 KB
ENCFF766EMG.bam bam (alignments) 305.9 MB
ENCFF812DRA.bed bed (peaks) 241.3 KB
ENCFF846JEW.bed bed (peaks) 45.1 KB
ENCFF869SIH.bigWig bigWig (minus strand signal of unique reads) 5.7 MB
ENCFF904KTV.bed bed (peaks) 44.7 KB
ENCFF906PBB.bed bed (peaks) 1.7 MB
ENCFF915SRQ.fastq fastq (reads) 669.9 MB
ENCFF948ZLM.bigBed bigBed (peaks) 3.5 MB
ENCFF985VOM.bigBed bigBed (peaks) 1.6 MB
ENCFF996GJG.bigBed bigBed (peaks) 1.1 MB
ENCSR445FZX ENCSR via encode_api

eCLIP control experiment on K562 against PTBP1

Homo sapiens
8 data files
FileTypeSize
ENCFF152FMO.bigWig bigWig (plus strand signal of unique reads) 22.3 MB
ENCFF153ZZO.bigWig bigWig (minus strand signal of unique reads) 21.6 MB
ENCFF207EDD.bigWig bigWig (minus strand signal of unique reads) 22.1 MB
ENCFF665CYG.bigWig bigWig (plus strand signal of unique reads) 22.8 MB
ENCFF791AGL.bam bam (alignments) 517.3 MB
ENCFF905RDN.fastq fastq (reads) 730.1 MB
ENCFF960RXN.fastq fastq (reads) 670.0 MB
ENCFF982TFI.bam bam (alignments) 506.8 MB
ENCSR987FTF ENCSR via encode_api

eCLIP experiment on HepG2 against RBFOX2

Homo sapiens
36 data files
FileTypeSize
ENCFF026CVE.bigBed bigBed (peaks) 2.7 MB
ENCFF030USB.bed bed (peaks) 665.4 KB
ENCFF074HHE.bigWig bigWig (plus strand signal of unique reads) 17.8 MB
ENCFF082QGS.bed bed (peaks) 1.7 MB
ENCFF154BQS.bam bam (alignments) 358.9 MB
ENCFF154DRN.bed bed (peaks) 166.0 KB
ENCFF170YQV.bam bam (alignments) 355.9 MB
ENCFF172GUS.fastq fastq (reads) 313.5 MB
ENCFF177ZTF.bigWig bigWig (minus strand signal of unique reads) 16.5 MB
ENCFF179HQN.bed bed (peaks) 313.3 KB
ENCFF222ARP.bigBed bigBed (peaks) 1.5 MB
ENCFF239CML.bam bam (alignments) 363.8 MB
ENCFF240NTF.bigWig bigWig (plus strand signal of unique reads) 17.7 MB
ENCFF252QKI.bigWig bigWig (minus strand signal of unique reads) 16.6 MB
ENCFF274QRL.bigWig bigWig (plus strand signal of unique reads) 17.6 MB
ENCFF289OFA.fastq fastq (reads) 337.6 MB
ENCFF311VRI.bigBed bigBed (peaks) 3.4 MB
ENCFF359HDC.bigBed bigBed (peaks) 802.0 KB
ENCFF369UWJ.bigBed bigBed (peaks) 581.7 KB
ENCFF390PJW.bed bed (peaks) 1.8 MB
ENCFF429HUD.bigBed bigBed (peaks) 3.3 MB
ENCFF433UTA.bed bed (peaks) 261.4 KB
ENCFF475KXE.bigBed bigBed (peaks) 2.7 MB
ENCFF591SSP.fastq fastq (reads) 314.7 MB
ENCFF639MYI.bed bed (peaks) 1.8 MB
ENCFF639WJL.bigBed bigBed (peaks) 3.4 MB
ENCFF647KDW.fastq fastq (reads) 334.6 MB
ENCFF663MLI.bigBed bigBed (peaks) 1.7 MB
ENCFF664WCU.bed bed (peaks) 1.7 MB
ENCFF668JDG.bigBed bigBed (peaks) 3.3 MB
ENCFF735HJV.bed bed (peaks) 783.5 KB
ENCFF752HWB.bigWig bigWig (minus strand signal of unique reads) 16.6 MB
ENCFF871NYM.bed bed (peaks) 168.9 KB
ENCFF939GCU.bigWig bigWig (minus strand signal of unique reads) 16.7 MB
ENCFF980ZNW.bigWig bigWig (plus strand signal of unique reads) 17.7 MB
ENCFF994WPX.bam bam (alignments) 365.4 MB
ENCSR121NVA ENCSR via encode_api

eCLIP experiment on HepG2 against PRPF8

Homo sapiens
36 data files
FileTypeSize
ENCFF016DQE.bigWig bigWig (minus strand signal of unique reads) 19.9 MB
ENCFF044RKN.bigWig bigWig (plus strand signal of unique reads) 20.5 MB
ENCFF048YPA.bed bed (peaks) 455.2 KB
ENCFF074MHP.fastq fastq (reads) 423.9 MB
ENCFF084UIB.bigBed bigBed (peaks) 3.1 MB
ENCFF086URZ.bigBed bigBed (peaks) 1.3 MB
ENCFF095PCI.bigWig bigWig (minus strand signal of unique reads) 20.6 MB
ENCFF098XUM.bed bed (peaks) 1.9 MB
ENCFF134AZF.bam bam (alignments) 397.6 MB
ENCFF156PFJ.bed bed (peaks) 1.9 MB
ENCFF159RSW.bigBed bigBed (peaks) 3.9 MB
ENCFF179RMZ.bed bed (peaks) 1.3 MB
ENCFF205BLM.bam bam (alignments) 423.1 MB
ENCFF216EHB.bigBed bigBed (peaks) 5.8 MB
ENCFF244MEN.bam bam (alignments) 427.0 MB
ENCFF319EMF.bigWig bigWig (minus strand signal of unique reads) 19.8 MB
ENCFF322FCO.bigWig bigWig (plus strand signal of unique reads) 21.6 MB
ENCFF377YUF.bed bed (peaks) 688.5 KB
ENCFF419BEO.fastq fastq (reads) 460.0 MB
ENCFF446YMK.bigBed bigBed (peaks) 3.9 MB
ENCFF493OBW.bigWig bigWig (plus strand signal of unique reads) 20.6 MB
ENCFF501MMT.bigBed bigBed (peaks) 4.8 MB
ENCFF507XFA.fastq fastq (reads) 368.5 MB
ENCFF552FSY.bigBed bigBed (peaks) 3.9 MB
ENCFF604SEH.bed bed (peaks) 491.3 KB
ENCFF605KYR.bigBed bigBed (peaks) 1.1 MB
ENCFF646XFI.bed bed (peaks) 2.0 MB
ENCFF652OTN.bigBed bigBed (peaks) 2.6 MB
ENCFF672HFP.bam bam (alignments) 392.7 MB
ENCFF747WFL.bed bed (peaks) 1.4 MB
ENCFF763OWE.bigWig bigWig (plus strand signal of unique reads) 21.5 MB
ENCFF770UHE.fastq fastq (reads) 400.9 MB
ENCFF782SZB.bigWig bigWig (minus strand signal of unique reads) 20.7 MB
ENCFF801PCX.bigBed bigBed (peaks) 3.9 MB
ENCFF865SCT.bed bed (peaks) 460.4 KB
ENCFF923IAU.bed bed (peaks) 2.0 MB
ENCSR844RVX ENCSR via encode_api

eCLIP experiment on K562 against EFTUD2

Homo sapiens
36 data files
FileTypeSize
ENCFF016JYD.bed bed (peaks) 570.4 KB
ENCFF073SAE.fastq fastq (reads) 364.4 MB
ENCFF086VSV.bigBed bigBed (peaks) 2.4 MB
ENCFF092TPS.bed bed (peaks) 1.5 MB
ENCFF151XSN.bigWig bigWig (plus strand signal of unique reads) 12.0 MB
ENCFF172TCX.bigWig bigWig (plus strand signal of unique reads) 11.3 MB
ENCFF174GUB.bed bed (peaks) 1.2 MB
ENCFF187FER.bam bam (alignments) 194.3 MB
ENCFF190WAS.bed bed (peaks) 118.6 KB
ENCFF238FXW.bigBed bigBed (peaks) 3.0 MB
ENCFF239CMH.bigWig bigWig (minus strand signal of unique reads) 11.6 MB
ENCFF243NGV.bed bed (peaks) 185.5 KB
ENCFF273YUG.fastq fastq (reads) 375.2 MB
ENCFF309MLF.bed bed (peaks) 682.2 KB
ENCFF362WMG.bigBed bigBed (peaks) 518.3 KB
ENCFF378IYP.bigBed bigBed (peaks) 1.1 MB
ENCFF396EFU.bigWig bigWig (minus strand signal of unique reads) 11.5 MB
ENCFF435OQO.bigBed bigBed (peaks) 2.5 MB
ENCFF477VKY.bigBed bigBed (peaks) 3.0 MB
ENCFF484SHF.bigBed bigBed (peaks) 2.0 MB
ENCFF503OBM.bed bed (peaks) 220.2 KB
ENCFF646HVY.bigBed bigBed (peaks) 457.1 KB
ENCFF652IOV.bam bam (alignments) 198.9 MB
ENCFF688KVW.fastq fastq (reads) 530.8 MB
ENCFF689YIJ.bed bed (peaks) 1.2 MB
ENCFF691BHS.bed bed (peaks) 1.5 MB
ENCFF701RMR.fastq fastq (reads) 519.4 MB
ENCFF703QKL.bam bam (alignments) 214.8 MB
ENCFF737JZP.bam bam (alignments) 219.2 MB
ENCFF813UWE.bigBed bigBed (peaks) 2.5 MB
ENCFF862ZPV.bed bed (peaks) 117.9 KB
ENCFF909OID.bigWig bigWig (minus strand signal of unique reads) 10.8 MB
ENCFF931LHZ.bigWig bigWig (plus strand signal of unique reads) 12.1 MB
ENCFF963HRU.bigBed bigBed (peaks) 1.2 MB
ENCFF987LSY.bigWig bigWig (plus strand signal of unique reads) 11.1 MB
ENCFF993ASY.bigWig bigWig (minus strand signal of unique reads) 10.7 MB
ENCSR314UMJ ENCSR via encode_api

eCLIP experiment on HepG2 against TRA2A

Homo sapiens
36 data files
FileTypeSize
ENCFF028DNT.bigBed bigBed (peaks) 794.8 KB
ENCFF042FJI.bigWig bigWig (plus strand signal of unique reads) 6.8 MB
ENCFF065AKB.fastq fastq (reads) 96.8 MB
ENCFF105GZJ.bed bed (peaks) 720.0 KB
ENCFF124ZCK.bigWig bigWig (plus strand signal of unique reads) 6.8 MB
ENCFF157EDM.bigBed bigBed (peaks) 798.1 KB
ENCFF210QRC.bed bed (peaks) 717.1 KB
ENCFF228NWX.bigBed bigBed (peaks) 1.3 MB
ENCFF253TTK.fastq fastq (reads) 152.9 MB
ENCFF267TXP.fastq fastq (reads) 147.1 MB
ENCFF271DET.bed bed (peaks) 169.1 KB
ENCFF330ILC.bigWig bigWig (minus strand signal of unique reads) 4.3 MB
ENCFF372BZV.bam bam (alignments) 145.5 MB
ENCFF406QZP.bed bed (peaks) 491.0 KB
ENCFF443POQ.bed bed (peaks) 116.3 KB
ENCFF592LJE.bigWig bigWig (plus strand signal of unique reads) 4.4 MB
ENCFF637SFZ.bigWig bigWig (minus strand signal of unique reads) 4.3 MB
ENCFF693CSS.bam bam (alignments) 146.4 MB
ENCFF741CKV.bigWig bigWig (minus strand signal of unique reads) 6.6 MB
ENCFF744BVM.bigWig bigWig (plus strand signal of unique reads) 4.5 MB
ENCFF745EHU.bam bam (alignments) 81.4 MB
ENCFF760PQD.bed bed (peaks) 293.5 KB
ENCFF766OCH.bed bed (peaks) 21.0 KB
ENCFF783HDV.bigBed bigBed (peaks) 287.6 KB
ENCFF783XOO.bigWig bigWig (minus strand signal of unique reads) 6.7 MB
ENCFF809UGI.bigBed bigBed (peaks) 657.3 KB
ENCFF832CEI.bam bam (alignments) 81.6 MB
ENCFF836WPZ.fastq fastq (reads) 94.1 MB
ENCFF903ULN.bigBed bigBed (peaks) 1.3 MB
ENCFF917NGY.bed bed (peaks) 21.2 KB
ENCFF923NNK.bigBed bigBed (peaks) 364.4 KB
ENCFF937BNI.bigBed bigBed (peaks) 972.6 KB
ENCFF944NHL.bigBed bigBed (peaks) 1.3 MB
ENCFF955HGE.bed bed (peaks) 382.2 KB
ENCFF966KQG.bed bed (peaks) 383.6 KB
ENCFF993FCZ.bigBed bigBed (peaks) 2.0 MB
ENCSR141OIM ENCSR via encode_api

eCLIP experiment on HepG2 against DDX6

Homo sapiens
36 data files
FileTypeSize
ENCFF035DLT.bigWig bigWig (plus strand signal of unique reads) 3.5 MB
ENCFF057WYD.fastq fastq (reads) 401.0 MB
ENCFF068WRV.bigBed bigBed (peaks) 1.2 MB
ENCFF102XRX.fastq fastq (reads) 397.6 MB
ENCFF146FNM.bigBed bigBed (peaks) 1.2 MB
ENCFF157GRN.bigWig bigWig (plus strand signal of unique reads) 6.5 MB
ENCFF182AID.bigBed bigBed (peaks) 576.3 KB
ENCFF245JNZ.bigBed bigBed (peaks) 2.3 MB
ENCFF261SMW.bed bed (peaks) 14.1 KB
ENCFF279YNK.bigBed bigBed (peaks) 2.3 MB
ENCFF293PUM.bam bam (alignments) 134.4 MB
ENCFF316XIZ.bigWig bigWig (plus strand signal of unique reads) 3.7 MB
ENCFF372OJA.bigWig bigWig (minus strand signal of unique reads) 3.5 MB
ENCFF398FGK.bam bam (alignments) 58.7 MB
ENCFF438KSN.bed bed (peaks) 970.5 KB
ENCFF472CJU.bed bed (peaks) 598.3 KB
ENCFF486QLT.bigWig bigWig (minus strand signal of unique reads) 3.4 MB
ENCFF513AFK.fastq fastq (reads) 381.6 MB
ENCFF526EOJ.bigBed bigBed (peaks) 1.3 MB
ENCFF566VWD.fastq fastq (reads) 410.8 MB
ENCFF605CZW.bigBed bigBed (peaks) 527.5 KB
ENCFF614NUP.bed bed (peaks) 12.8 KB
ENCFF629EPY.bigBed bigBed (peaks) 1.7 MB
ENCFF650BQD.bed bed (peaks) 720.6 KB
ENCFF661BGG.bigWig bigWig (minus strand signal of unique reads) 6.2 MB
ENCFF666DHB.bigWig bigWig (minus strand signal of unique reads) 6.3 MB
ENCFF680IKQ.bed bed (peaks) 959.5 KB
ENCFF706BZA.bigWig bigWig (plus strand signal of unique reads) 6.4 MB
ENCFF707KQK.bigBed bigBed (peaks) 1.6 MB
ENCFF874OGQ.bigBed bigBed (peaks) 1.3 MB
ENCFF901JSX.bam bam (alignments) 130.8 MB
ENCFF909ZWR.bed bed (peaks) 635.7 KB
ENCFF912RMI.bed bed (peaks) 267.9 KB
ENCFF978MRH.bed bed (peaks) 690.9 KB
ENCFF978UYI.bam bam (alignments) 62.4 MB
ENCFF980KEI.bed bed (peaks) 247.1 KB
ENCSR981WKN ENCSR via encode_api

eCLIP experiment on K562 against PTBP1

Homo sapiens
36 data files
FileTypeSize
ENCFF019TEQ.fastq fastq (reads) 172.5 MB
ENCFF022TVE.bigBed bigBed (peaks) 3.0 MB
ENCFF088RLJ.bigBed bigBed (peaks) 3.0 MB
ENCFF105HCP.bigWig bigWig (plus strand signal of unique reads) 11.5 MB
ENCFF166LLH.bed bed (peaks) 273.0 KB
ENCFF172FTR.bigWig bigWig (minus strand signal of unique reads) 11.0 MB
ENCFF196VDD.bed bed (peaks) 200.1 KB
ENCFF200AWX.bed bed (peaks) 1.4 MB
ENCFF247DQN.bam bam (alignments) 192.4 MB
ENCFF258TKH.bigWig bigWig (plus strand signal of unique reads) 11.3 MB
ENCFF262NXW.bed bed (peaks) 988.7 KB
ENCFF273VIJ.fastq fastq (reads) 297.1 MB
ENCFF374QZV.bigBed bigBed (peaks) 2.5 MB
ENCFF467YAF.bigBed bigBed (peaks) 1.3 MB
ENCFF517FVN.bam bam (alignments) 295.4 MB
ENCFF525OKR.bed bed (peaks) 510.0 KB
ENCFF536XRN.bigWig bigWig (plus strand signal of unique reads) 16.6 MB
ENCFF577HFG.bed bed (peaks) 691.2 KB
ENCFF594PWG.bed bed (peaks) 981.3 KB
ENCFF616KCQ.bigWig bigWig (minus strand signal of unique reads) 15.9 MB
ENCFF617YCT.bigWig bigWig (minus strand signal of unique reads) 10.7 MB
ENCFF659RKW.bam bam (alignments) 285.7 MB
ENCFF678FIR.bigBed bigBed (peaks) 491.5 KB
ENCFF689XJE.fastq fastq (reads) 174.6 MB
ENCFF692FYQ.bigBed bigBed (peaks) 618.1 KB
ENCFF699ABN.bigBed bigBed (peaks) 1.9 MB
ENCFF764BOF.bigBed bigBed (peaks) 1.7 MB
ENCFF765BPN.bam bam (alignments) 187.5 MB
ENCFF780LWA.bigBed bigBed (peaks) 1.7 MB
ENCFF799AHI.bigWig bigWig (minus strand signal of unique reads) 15.5 MB
ENCFF894KLP.bed bed (peaks) 1.4 MB
ENCFF907HNN.bed bed (peaks) 158.6 KB
ENCFF924CZR.bed bed (peaks) 155.2 KB
ENCFF927TVJ.bigBed bigBed (peaks) 1019.9 KB
ENCFF967LWB.bigWig bigWig (plus strand signal of unique reads) 16.2 MB
ENCFF989UNR.fastq fastq (reads) 290.7 MB
ENCSR539ZTS ENCSR via encode_api

eCLIP experiment on K562 against TROVE2

Homo sapiens
36 data files
FileTypeSize
ENCFF020CTE.bigWig bigWig (minus strand signal of unique reads) 18.2 MB
ENCFF043TCO.bed bed (peaks) 1.4 MB
ENCFF053TCK.fastq fastq (reads) 680.7 MB
ENCFF063MVN.bam bam (alignments) 289.5 MB
ENCFF097KHA.bigBed bigBed (peaks) 1.7 MB
ENCFF099GQV.bed bed (peaks) 152.5 KB
ENCFF108KYH.fastq fastq (reads) 517.4 MB
ENCFF128FEU.bed bed (peaks) 161.7 KB
ENCFF132WZM.bigBed bigBed (peaks) 842.2 KB
ENCFF145LAT.fastq fastq (reads) 545.3 MB
ENCFF156NTC.bigWig bigWig (plus strand signal of unique reads) 17.2 MB
ENCFF201UGT.bigBed bigBed (peaks) 420.9 KB
ENCFF220AMQ.bigWig bigWig (plus strand signal of unique reads) 18.5 MB
ENCFF240PML.bigBed bigBed (peaks) 898.5 KB
ENCFF243GNO.bed bed (peaks) 1.8 MB
ENCFF294FZI.bam bam (alignments) 335.4 MB
ENCFF332RLS.bigWig bigWig (plus strand signal of unique reads) 18.9 MB
ENCFF347INC.bigBed bigBed (peaks) 3.6 MB
ENCFF355URY.bigWig bigWig (minus strand signal of unique reads) 17.6 MB
ENCFF365GQC.bigBed bigBed (peaks) 3.5 MB
ENCFF402DTY.bed bed (peaks) 1.7 MB
ENCFF494JCL.bigBed bigBed (peaks) 392.5 KB
ENCFF507IRG.bed bed (peaks) 1.3 MB
ENCFF514NWO.bed bed (peaks) 11.6 KB
ENCFF568HWB.bam bam (alignments) 303.4 MB
ENCFF580LAY.bigWig bigWig (plus strand signal of unique reads) 16.6 MB
ENCFF581RBS.bam bam (alignments) 345.4 MB
ENCFF649JOH.bed bed (peaks) 422.7 KB
ENCFF701ABR.bigWig bigWig (minus strand signal of unique reads) 16.0 MB
ENCFF748AHJ.bigBed bigBed (peaks) 1.5 MB
ENCFF794RJQ.bed bed (peaks) 11.2 KB
ENCFF813JKM.bed bed (peaks) 447.2 KB
ENCFF815JMM.fastq fastq (reads) 647.8 MB
ENCFF870EKX.bigWig bigWig (minus strand signal of unique reads) 16.5 MB
ENCFF996ZNV.bigBed bigBed (peaks) 2.3 MB
ENCFF998MHJ.bigBed bigBed (peaks) 2.2 MB
ENCSR773KRC ENCSR via encode_api

eCLIP experiment on HepG2 against SRSF9

Homo sapiens
36 data files
FileTypeSize
ENCFF038QQM.fastq fastq (reads) 228.5 MB
ENCFF071WZV.bigWig bigWig (plus strand signal of unique reads) 14.9 MB
ENCFF075NSB.bed bed (peaks) 14.8 KB
ENCFF125UVA.bed bed (peaks) 1.1 MB
ENCFF133GHS.bigWig bigWig (plus strand signal of unique reads) 12.5 MB
ENCFF186YPQ.bigBed bigBed (peaks) 1.1 MB
ENCFF189JPN.bigBed bigBed (peaks) 2.3 MB
ENCFF201APJ.bigBed bigBed (peaks) 1.5 MB
ENCFF207BLP.bigWig bigWig (plus strand signal of unique reads) 14.9 MB
ENCFF223YZP.bigBed bigBed (peaks) 3.1 MB
ENCFF236WOT.bigWig bigWig (minus strand signal of unique reads) 14.4 MB
ENCFF270UPC.bed bed (peaks) 567.5 KB
ENCFF327JJE.bed bed (peaks) 1.1 MB
ENCFF328SYC.bigWig bigWig (minus strand signal of unique reads) 14.4 MB
ENCFF354DZK.fastq fastq (reads) 295.4 MB
ENCFF409GPI.bed bed (peaks) 1.4 MB
ENCFF413CWK.bigWig bigWig (minus strand signal of unique reads) 12.1 MB
ENCFF432ASF.bed bed (peaks) 1.5 MB
ENCFF460TAE.bam bam (alignments) 203.5 MB
ENCFF481BSO.bigBed bigBed (peaks) 1.9 MB
ENCFF490SUS.bigBed bigBed (peaks) 510.2 KB
ENCFF500JQA.bigWig bigWig (minus strand signal of unique reads) 12.1 MB
ENCFF529OUY.bed bed (peaks) 206.8 KB
ENCFF573SHV.bigBed bigBed (peaks) 3.0 MB
ENCFF589NCU.fastq fastq (reads) 238.3 MB
ENCFF593PCX.bam bam (alignments) 260.3 MB
ENCFF594WVG.bed bed (peaks) 843.4 KB
ENCFF636PHB.bigBed bigBed (peaks) 1.8 MB
ENCFF651VGM.bam bam (alignments) 260.1 MB
ENCFF709HAD.bam bam (alignments) 203.7 MB
ENCFF765PIF.bed bed (peaks) 15.0 KB
ENCFF853NSA.bigWig bigWig (plus strand signal of unique reads) 12.5 MB
ENCFF912JVC.fastq fastq (reads) 278.9 MB
ENCFF941JLL.bigBed bigBed (peaks) 697.5 KB
ENCFF946ENX.bigBed bigBed (peaks) 2.9 MB
ENCFF979SAC.bed bed (peaks) 319.3 KB
ENCSR658IQB ENCSR via encode_api

eCLIP experiment on K562 against SMNDC1

Homo sapiens
36 data files
FileTypeSize
ENCFF081WGA.bed bed (peaks) 540.0 KB
ENCFF087QQF.bigWig bigWig (minus strand signal of unique reads) 16.2 MB
ENCFF090PBR.bigBed bigBed (peaks) 477.8 KB
ENCFF092WOP.bigWig bigWig (plus strand signal of unique reads) 16.4 MB
ENCFF119DHE.bed bed (peaks) 53.6 KB
ENCFF142PZD.bed bed (peaks) 1.1 MB
ENCFF144FQQ.bigBed bigBed (peaks) 1.9 MB
ENCFF151TID.bigBed bigBed (peaks) 2.7 MB
ENCFF232GGD.bigWig bigWig (plus strand signal of unique reads) 17.2 MB
ENCFF253SPF.bam bam (alignments) 323.5 MB
ENCFF276WKC.bigBed bigBed (peaks) 483.5 KB
ENCFF317RZD.fastq fastq (reads) 623.8 MB
ENCFF372GBO.fastq fastq (reads) 636.6 MB
ENCFF416KSJ.bigBed bigBed (peaks) 2.1 MB
ENCFF457GTR.fastq fastq (reads) 618.7 MB
ENCFF462RQB.bed bed (peaks) 188.5 KB
ENCFF501FLH.bed bed (peaks) 203.0 KB
ENCFF563QPR.bigWig bigWig (minus strand signal of unique reads) 15.7 MB
ENCFF564JRL.bigBed bigBed (peaks) 2.7 MB
ENCFF581FUT.bed bed (peaks) 1.3 MB
ENCFF598SKR.bigWig bigWig (minus strand signal of unique reads) 15.4 MB
ENCFF600JOR.bigWig bigWig (plus strand signal of unique reads) 16.4 MB
ENCFF630RFF.bigBed bigBed (peaks) 2.4 MB
ENCFF723GHJ.bed bed (peaks) 1.1 MB
ENCFF770DEI.bam bam (alignments) 246.4 MB
ENCFF817JQS.bam bam (alignments) 339.4 MB
ENCFF828HTD.bed bed (peaks) 557.4 KB
ENCFF851QPV.bam bam (alignments) 250.6 MB
ENCFF857IFN.bigBed bigBed (peaks) 1.0 MB
ENCFF872VFP.bigWig bigWig (minus strand signal of unique reads) 15.3 MB
ENCFF877YKQ.bigWig bigWig (plus strand signal of unique reads) 16.2 MB
ENCFF909OTT.fastq fastq (reads) 660.8 MB
ENCFF927UFK.bed bed (peaks) 1.3 MB
ENCFF929QZE.bigBed bigBed (peaks) 1.0 MB
ENCFF938SQK.bigBed bigBed (peaks) 2.0 MB
ENCFF943XOU.bed bed (peaks) 52.6 KB
ENCSR919HSE ENCSR via encode_api

eCLIP experiment on HepG2 against CSTF2T

Homo sapiens
36 data files
FileTypeSize
ENCFF004SPT.bed bed (peaks) 932.4 KB
ENCFF019IEW.bed bed (peaks) 3.2 MB
ENCFF043WLS.bigBed bigBed (peaks) 1.8 MB
ENCFF093WJU.fastq fastq (reads) 669.9 MB
ENCFF097YMJ.bigWig bigWig (plus strand signal of unique reads) 36.1 MB
ENCFF141DOI.bed bed (peaks) 466.9 KB
ENCFF208OVE.bam bam (alignments) 809.1 MB
ENCFF212AOD.bigWig bigWig (plus strand signal of unique reads) 36.0 MB
ENCFF240AIR.bigBed bigBed (peaks) 5.6 MB
ENCFF268ECW.bam bam (alignments) 812.9 MB
ENCFF313BCR.fastq fastq (reads) 543.2 MB
ENCFF330SZX.bed bed (peaks) 894.1 KB
ENCFF336QYP.bigBed bigBed (peaks) 786.2 KB
ENCFF346HHC.bam bam (alignments) 775.1 MB
ENCFF444JQZ.bigWig bigWig (minus strand signal of unique reads) 34.4 MB
ENCFF478SRR.bigBed bigBed (peaks) 5.7 MB
ENCFF550EJC.bigBed bigBed (peaks) 5.3 MB
ENCFF559OUM.bigBed bigBed (peaks) 1.7 MB
ENCFF562AZL.bam bam (alignments) 773.3 MB
ENCFF575KNT.bigBed bigBed (peaks) 3.1 MB
ENCFF625AZC.bed bed (peaks) 3.0 MB
ENCFF630RYF.bigBed bigBed (peaks) 3.3 MB
ENCFF649JWC.bigWig bigWig (plus strand signal of unique reads) 33.7 MB
ENCFF700HIR.bed bed (peaks) 3.2 MB
ENCFF703DUZ.bigBed bigBed (peaks) 5.2 MB
ENCFF762SDS.bigBed bigBed (peaks) 837.9 KB
ENCFF762UXF.fastq fastq (reads) 591.2 MB
ENCFF786JAM.bed bed (peaks) 3.0 MB
ENCFF787TEA.bigWig bigWig (minus strand signal of unique reads) 32.8 MB
ENCFF795LDZ.bed bed (peaks) 360.3 KB
ENCFF818WAX.bed bed (peaks) 341.0 KB
ENCFF843RIM.bigWig bigWig (minus strand signal of unique reads) 32.8 MB
ENCFF854JCC.bigWig bigWig (plus strand signal of unique reads) 33.7 MB
ENCFF860GJP.fastq fastq (reads) 461.5 MB
ENCFF894CWQ.bigWig bigWig (minus strand signal of unique reads) 34.4 MB
ENCFF945YRD.bed bed (peaks) 465.0 KB
ENCSR133QEA ENCSR via encode_api

eCLIP experiment on K562 against SF3B1

Homo sapiens
34 data files
FileTypeSize
ENCFF007CDS.bigWig bigWig (minus strand signal of unique reads) 1.4 MB
ENCFF007PYZ.bigBed bigBed (peaks) 1.3 MB
ENCFF067EOQ.bed bed (peaks) 279.0 KB
ENCFF122SLD.bigWig bigWig (minus strand signal of unique reads) 1.4 MB
ENCFF143JZZ.bed bed (peaks) 574.4 KB
ENCFF151JUN.fastq fastq (reads) 707.0 MB
ENCFF177PRH.bam bam (alignments) 41.3 MB
ENCFF190SDC.bigBed bigBed (peaks) 1.3 MB
ENCFF197LZZ.bigWig bigWig (plus strand signal of unique reads) 1.5 MB
ENCFF210VRR.bed bed (peaks) 675.9 KB
ENCFF234UQG.bigWig bigWig (plus strand signal of unique reads) 1.5 MB
ENCFF260NCQ.bed bed (peaks) 348.3 KB
ENCFF322GPD.bed bed (peaks) 840.0 B
ENCFF351MRH.fastq fastq (reads) 698.6 MB
ENCFF351XLV.bigBed bigBed (peaks) 1.2 MB
ENCFF415ZYA.bigBed bigBed (peaks) 1.3 MB
ENCFF421JRL.bed bed (peaks) 663.2 KB
ENCFF430PGG.bigWig bigWig (plus strand signal of unique reads) 2.6 MB
ENCFF498GFT.bed bed (peaks) 656.6 KB
ENCFF504MYO.bigBed bigBed (peaks) 652.5 KB
ENCFF522WHU.bigWig bigWig (minus strand signal of unique reads) 2.5 MB
ENCFF529WBV.bigBed bigBed (peaks) 1.2 MB
ENCFF563VCX.bigBed bigBed (peaks) 958.7 KB
ENCFF564ARY.bam bam (alignments) 39.0 MB
ENCFF585JKL.fastq fastq (reads) 672.0 MB
ENCFF724XML.bed bed (peaks) 630.6 KB
ENCFF747RLR.bigBed bigBed (peaks) 547.3 KB
ENCFF763CZN.fastq fastq (reads) 736.7 MB
ENCFF766KGY.bam bam (alignments) 29.7 MB
ENCFF773AKE.bed bed (peaks) 632.2 KB
ENCFF835USP.bigWig bigWig (minus strand signal of unique reads) 2.4 MB
ENCFF887ARJ.bed bed (peaks) 1016.0 B
ENCFF928WSR.bigWig bigWig (plus strand signal of unique reads) 2.5 MB
ENCFF959GNA.bam bam (alignments) 28.6 MB
ENCSR305IPT ENCSR via encode_api

eCLIP control experiment on K562 against KHSRP

Homo sapiens
8 data files
FileTypeSize
ENCFF077JHQ.bigWig bigWig (minus strand signal of unique reads) 29.0 MB
ENCFF232EFV.bigWig bigWig (minus strand signal of unique reads) 27.9 MB
ENCFF405WBU.bam bam (alignments) 673.3 MB
ENCFF517CRH.fastq fastq (reads) 668.8 MB
ENCFF644CKP.bam bam (alignments) 654.6 MB
ENCFF661IIQ.bigWig bigWig (plus strand signal of unique reads) 28.9 MB
ENCFF665VEO.bigWig bigWig (plus strand signal of unique reads) 30.1 MB
ENCFF927DLO.fastq fastq (reads) 728.7 MB
ENCSR067UKU ENCSR via encode_api

eCLIP control experiment on K562 against EWSR1

Homo sapiens
8 data files
FileTypeSize
ENCFF110AGV.fastq fastq (reads) 521.5 MB
ENCFF116KIF.bigWig bigWig (plus strand signal of unique reads) 17.4 MB
ENCFF130YYP.fastq fastq (reads) 471.3 MB
ENCFF323NPX.bigWig bigWig (minus strand signal of unique reads) 16.4 MB
ENCFF351VQX.bigWig bigWig (plus strand signal of unique reads) 17.0 MB
ENCFF485UCP.bam bam (alignments) 351.2 MB
ENCFF695GDV.bigWig bigWig (minus strand signal of unique reads) 16.8 MB
ENCFF810PWF.bam bam (alignments) 359.1 MB
ENCSR130TOJ ENCSR via encode_api

eCLIP control experiment on HepG2 against QKI

Homo sapiens
8 data files
FileTypeSize
ENCFF015GLL.bam bam (alignments) 534.0 MB
ENCFF365AGK.bam bam (alignments) 523.1 MB
ENCFF368GUP.bigWig bigWig (minus strand signal of unique reads) 22.4 MB
ENCFF387NSQ.bigWig bigWig (minus strand signal of unique reads) 22.9 MB
ENCFF436PYT.bigWig bigWig (plus strand signal of unique reads) 23.4 MB
ENCFF578ENS.bigWig bigWig (plus strand signal of unique reads) 22.9 MB
ENCFF702IDH.fastq fastq (reads) 609.9 MB
ENCFF974DXZ.fastq fastq (reads) 637.4 MB
ENCSR631CJA ENCSR via encode_api

eCLIP control experiment on K562 against SMNDC1

Homo sapiens
8 data files
FileTypeSize
ENCFF030CUC.bigWig bigWig (plus strand signal of unique reads) 16.6 MB
ENCFF364ZNC.bam bam (alignments) 348.2 MB
ENCFF716JKI.bigWig bigWig (minus strand signal of unique reads) 15.6 MB
ENCFF822QAR.bigWig bigWig (minus strand signal of unique reads) 16.0 MB
ENCFF842VFC.fastq fastq (reads) 562.2 MB
ENCFF918AAS.bam bam (alignments) 344.0 MB
ENCFF930MIS.bigWig bigWig (plus strand signal of unique reads) 16.2 MB
ENCFF981COP.fastq fastq (reads) 630.9 MB
ENCSR736LKF ENCSR via encode_api

eCLIP control experiment on K562 against BUD13

Homo sapiens
8 data files
FileTypeSize
ENCFF068QGD.bam bam (alignments) 718.8 MB
ENCFF102FKE.bam bam (alignments) 745.9 MB
ENCFF239KZT.bigWig bigWig (plus strand signal of unique reads) 33.5 MB
ENCFF333ODQ.bigWig bigWig (plus strand signal of unique reads) 34.8 MB
ENCFF593CTK.fastq fastq (reads) 823.9 MB
ENCFF632UHM.bigWig bigWig (minus strand signal of unique reads) 33.8 MB
ENCFF680TGD.bigWig bigWig (minus strand signal of unique reads) 32.6 MB
ENCFF818MIM.fastq fastq (reads) 876.7 MB
ENCSR923NKN ENCSR via encode_api

eCLIP experiment on K562 against DDX55

Homo sapiens
36 data files
FileTypeSize
ENCFF002PZE.bigBed bigBed (peaks); assembly: hg19 1.7 MB
ENCFF017KKV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.4 MB
ENCFF022MZM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.2 MB
ENCFF025OMD.bed bed (peaks); assembly: GRCh38 319.2 KB
ENCFF054ENI.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.5 MB
ENCFF099PFC.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF103HVH.bigBed bigBed (peaks); assembly: hg19 2.4 MB
ENCFF162LAM.bam bam (alignments); assembly: GRCh38 212.5 MB
ENCFF236ERM.bigBed bigBed (peaks); assembly: hg19 3.0 MB
ENCFF242QPD.bed bed (peaks); assembly: GRCh38 213.6 KB
ENCFF299UUC.bed bed (peaks); assembly: hg19 843.6 KB
ENCFF358GUT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.5 MB
ENCFF367CBZ.bigBed bigBed (peaks); assembly: GRCh38 2.4 MB
ENCFF401XTL.bed bed (peaks); assembly: GRCh38 1.0 MB
ENCFF411WKH.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF432FVJ.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF438QZI.fastq fastq (reads) 462.9 MB
ENCFF456WXJ.bed bed (peaks); assembly: hg19 611.8 KB
ENCFF462WAI.bed bed (peaks); assembly: GRCh38 24.5 KB
ENCFF492LNE.bam bam (alignments); assembly: hg19 222.8 MB
ENCFF553EAL.bam bam (alignments); assembly: GRCh38 207.5 MB
ENCFF641VGX.bigBed bigBed (peaks); assembly: GRCh38 568.1 KB
ENCFF667IWN.fastq fastq (reads) 448.2 MB
ENCFF727XDH.bed bed (peaks); assembly: hg19 24.6 KB
ENCFF782ZSQ.fastq fastq (reads) 438.5 MB
ENCFF786BMN.bigBed bigBed (peaks); assembly: GRCh38 759.8 KB
ENCFF790YXZ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.9 MB
ENCFF791CPI.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF802ALB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.7 MB
ENCFF809OXJ.bigBed bigBed (peaks); assembly: GRCh38 2.2 MB
ENCFF826HOQ.bam bam (alignments); assembly: hg19 219.9 MB
ENCFF837TPV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.0 MB
ENCFF898EQT.bigBed bigBed (peaks); assembly: hg19 2.3 MB
ENCFF935KUR.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF986LSQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.0 MB
ENCFF992HTJ.fastq fastq (reads) 426.2 MB
ENCSR580MFX ENCSR via encode_api

eCLIP experiment on HepG2 against SUPV3L1

Homo sapiens
34 data files
FileTypeSize
ENCFF029CXE.bigBed bigBed (peaks); assembly: GRCh38 1.4 MB
ENCFF089NRQ.bed bed (peaks); assembly: hg19 808.5 KB
ENCFF174JYZ.bigBed bigBed (peaks); assembly: hg19 1.9 MB
ENCFF186QJV.bed bed (peaks); assembly: GRCh38 1.1 MB
ENCFF204ENL.bigBed bigBed (peaks); assembly: GRCh38 320.6 KB
ENCFF269FJC.bigBed bigBed (peaks); assembly: hg19 914.0 KB
ENCFF275EAZ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.9 MB
ENCFF300RXV.fastq fastq (reads) 542.9 MB
ENCFF349HRX.fastq fastq (reads) 547.5 MB
ENCFF429MXX.bam bam (alignments); assembly: hg19 215.6 MB
ENCFF435HVG.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF494KCY.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.7 MB
ENCFF513URC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.6 MB
ENCFF523XIE.bed bed (peaks); assembly: GRCh38 146.4 KB
ENCFF546OJL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 5.9 MB
ENCFF553BGD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.5 MB
ENCFF576FDV.bed bed (peaks); assembly: hg19 449.9 KB
ENCFF579FWN.bed bed (peaks); assembly: GRCh38 775.8 KB
ENCFF590AHU.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.8 MB
ENCFF591UBR.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.7 MB
ENCFF728OEM.fastq fastq (reads) 435.3 MB
ENCFF758EWI.bed bed (peaks); assembly: hg19 5.8 KB
ENCFF769YOB.bed bed (peaks); assembly: hg19 434.9 KB
ENCFF816LYN.bam bam (alignments); assembly: hg19 131.4 MB
ENCFF819APR.bigBed bigBed (peaks); assembly: GRCh38 1.8 MB
ENCFF853HTH.bam bam (alignments); assembly: GRCh38 208.8 MB
ENCFF882KLS.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF939TVS.bigBed bigBed (peaks); assembly: hg19 905.9 KB
ENCFF941QMM.bam bam (alignments); assembly: GRCh38 124.4 MB
ENCFF956CPQ.fastq fastq (reads) 434.0 MB
ENCFF956RXA.bigBed bigBed (peaks); assembly: GRCh38 337.7 KB
ENCFF958YAU.bed bed (peaks); assembly: GRCh38 137.4 KB
ENCFF964HSA.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.3 MB
ENCFF999ZAW.bed bed (peaks); assembly: GRCh38 6.1 KB
ENCSR653HQC ENCSR via encode_api

eCLIP experiment on K562 against DROSHA

Homo sapiens
36 data files
FileTypeSize
ENCFF010IIF.bed bed (peaks) 208.1 KB
ENCFF013WVP.bigBed bigBed (peaks) 1.0 MB
ENCFF043IMA.bigWig bigWig (minus strand signal of unique reads) 19.8 MB
ENCFF073ILV.fastq fastq (reads) 801.4 MB
ENCFF121SZH.bigBed bigBed (peaks) 2.3 MB
ENCFF150EWC.bigWig bigWig (plus strand signal of unique reads) 20.7 MB
ENCFF171GUD.bigBed bigBed (peaks) 4.5 MB
ENCFF200MRU.bigWig bigWig (plus strand signal of unique reads) 10.1 MB
ENCFF204MHI.bigWig bigWig (minus strand signal of unique reads) 20.1 MB
ENCFF233UZH.bam bam (alignments) 409.8 MB
ENCFF238REI.bed bed (peaks) 83.9 KB
ENCFF281LQY.bigBed bigBed (peaks) 560.2 KB
ENCFF307CXZ.fastq fastq (reads) 834.3 MB
ENCFF314RBZ.bed bed (peaks) 2.3 MB
ENCFF353HQK.bigWig bigWig (minus strand signal of unique reads) 9.5 MB
ENCFF414EPW.bigBed bigBed (peaks) 4.5 MB
ENCFF434GPP.bam bam (alignments) 420.7 MB
ENCFF516OAW.bed bed (peaks) 1.1 MB
ENCFF517LEW.bigWig bigWig (plus strand signal of unique reads) 10.2 MB
ENCFF521GGC.fastq fastq (reads) 887.2 MB
ENCFF541YAM.fastq fastq (reads) 847.1 MB
ENCFF573IWM.bigBed bigBed (peaks) 475.1 KB
ENCFF586TBP.bigBed bigBed (peaks) 1.9 MB
ENCFF602ZLI.bed bed (peaks) 1.1 MB
ENCFF622ODF.bed bed (peaks) 193.3 KB
ENCFF637FTL.bam bam (alignments) 175.4 MB
ENCFF661XXP.bigWig bigWig (plus strand signal of unique reads) 21.0 MB
ENCFF700GQU.bigWig bigWig (minus strand signal of unique reads) 9.7 MB
ENCFF736UCQ.bed bed (peaks) 529.5 KB
ENCFF773TEA.bam bam (alignments) 171.6 MB
ENCFF797BHU.bed bed (peaks) 84.0 KB
ENCFF816ATW.bigBed bigBed (peaks) 2.2 MB
ENCFF831EJT.bigBed bigBed (peaks) 1.9 MB
ENCFF840QVA.bed bed (peaks) 2.3 MB
ENCFF890JAE.bed bed (peaks) 593.4 KB
ENCFF915VZC.bigBed bigBed (peaks) 1.3 MB
ENCSR570WLM ENCSR via encode_api

eCLIP experiment on HepG2 against QKI

Homo sapiens
36 data files
FileTypeSize
ENCFF074DRB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 25.5 MB
ENCFF081ZJS.bam bam (alignments); assembly: hg19 346.6 MB
ENCFF179YDO.bam bam (alignments); assembly: hg19 576.7 MB
ENCFF180SZL.fastq fastq (reads) 1.1 GB
ENCFF183VLS.bigBed bigBed (peaks); assembly: hg19 5.4 MB
ENCFF236FAE.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF299VTZ.bed bed (peaks); assembly: GRCh38 279.3 KB
ENCFF420RBU.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 18.0 MB
ENCFF444DES.fastq fastq (reads) 1019.9 MB
ENCFF445CGF.bed bed (peaks); assembly: hg19 221.5 KB
ENCFF452EOC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 17.6 MB
ENCFF454GLW.bed bed (peaks); assembly: hg19 720.3 KB
ENCFF459ANM.bed bed (peaks); assembly: hg19 2.8 MB
ENCFF480VGI.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF525PZA.bed bed (peaks); assembly: hg19 2.1 MB
ENCFF540VOG.fastq fastq (reads) 1.0 GB
ENCFF542XZB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 18.9 MB
ENCFF544QKV.bed bed (peaks); assembly: hg19 680.8 KB
ENCFF551IJQ.bed bed (peaks); assembly: GRCh38 2.8 MB
ENCFF567ADV.bam bam (alignments); assembly: GRCh38 555.1 MB
ENCFF594IKL.bigBed bigBed (peaks); assembly: GRCh38 3.3 MB
ENCFF683OAO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 18.4 MB
ENCFF704OCI.bed bed (peaks); assembly: GRCh38 213.9 KB
ENCFF714ZTU.bed bed (peaks); assembly: GRCh38 260.3 KB
ENCFF723OPP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 26.6 MB
ENCFF746GSO.fastq fastq (reads) 1.1 GB
ENCFF810CHK.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 26.0 MB
ENCFF815XNW.bed bed (peaks); assembly: GRCh38 2.0 MB
ENCFF834HHP.bigBed bigBed (peaks); assembly: GRCh38 513.5 KB
ENCFF860YHG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 25.4 MB
ENCFF862YVK.bam bam (alignments); assembly: GRCh38 323.2 MB
ENCFF870PAN.bigBed bigBed (peaks); assembly: hg19 3.0 MB
ENCFF887ZND.bigBed bigBed (peaks); assembly: hg19 3.4 MB
ENCFF941YPK.bigBed bigBed (peaks); assembly: GRCh38 636.4 KB
ENCFF984WOV.bigBed bigBed (peaks); assembly: GRCh38 5.3 MB
ENCFF998ASJ.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCSR022BVV ENCSR via encode_api

eCLIP experiment on K562 against LSM11

Homo sapiens
36 data files
FileTypeSize
ENCFF005VLT.bigBed bigBed (peaks); assembly: GRCh38 3.4 MB
ENCFF058BLU.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.3 MB
ENCFF097BXD.bigBed bigBed (peaks); assembly: GRCh38 408.9 KB
ENCFF116WPI.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF136HXF.bed bed (peaks); assembly: hg19 1.7 MB
ENCFF203JSP.fastq fastq (reads) 523.7 MB
ENCFF318QEW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.5 MB
ENCFF329QOR.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 12.9 MB
ENCFF350QMY.bigBed bigBed (peaks); assembly: GRCh38 1.8 MB
ENCFF366PDK.bigBed bigBed (peaks); assembly: hg19 1.7 MB
ENCFF408YYK.fastq fastq (reads) 535.7 MB
ENCFF414DIO.bigBed bigBed (peaks); assembly: hg19 3.4 MB
ENCFF418GUW.bed bed (peaks); assembly: hg19 448.4 KB
ENCFF425PPQ.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF438KND.bed bed (peaks); assembly: GRCh38 154.0 KB
ENCFF484RUT.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 21.6 MB
ENCFF513FCX.bed bed (peaks); assembly: GRCh38 198.6 KB
ENCFF516OSP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 22.9 MB
ENCFF538ZHY.bed bed (peaks); assembly: hg19 28.1 KB
ENCFF583VFV.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 22.0 MB
ENCFF590STZ.bigBed bigBed (peaks); assembly: hg19 902.1 KB
ENCFF597NUC.bed bed (peaks); assembly: hg19 586.1 KB
ENCFF608XEX.bam bam (alignments); assembly: hg19 413.2 MB
ENCFF636BMJ.bam bam (alignments); assembly: hg19 232.4 MB
ENCFF680ZUK.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 21.1 MB
ENCFF733BEV.bed bed (peaks); assembly: GRCh38 1.0 MB
ENCFF760VJY.bed bed (peaks); assembly: GRCh38 1.7 MB
ENCFF816DGB.bigBed bigBed (peaks); assembly: GRCh38 468.2 KB
ENCFF858EHN.bed bed (peaks); assembly: GRCh38 28.2 KB
ENCFF875THF.fastq fastq (reads) 534.1 MB
ENCFF889WRY.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF924IHY.fastq fastq (reads) 526.9 MB
ENCFF938CFK.bam bam (alignments); assembly: GRCh38 221.4 MB
ENCFF938ROF.bigBed bigBed (peaks); assembly: hg19 1.8 MB
ENCFF955SIM.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.7 MB
ENCFF989NBF.bam bam (alignments); assembly: GRCh38 400.8 MB
ENCSR238CLX ENCSR via encode_api

eCLIP experiment on K562 against GEMIN5

Homo sapiens
34 data files
FileTypeSize
ENCFF016THS.bigBed bigBed (peaks) 2.6 MB
ENCFF038WBZ.bigBed bigBed (peaks) 2.0 MB
ENCFF050VVI.bed bed (peaks) 59.2 KB
ENCFF072KEM.bam bam (alignments) 161.6 MB
ENCFF083ZYT.bed bed (peaks) 938.7 KB
ENCFF091VCD.bam bam (alignments) 250.6 MB
ENCFF125NXB.bed bed (peaks) 172.6 KB
ENCFF141DSU.bigWig bigWig (minus strand signal of unique reads) 13.7 MB
ENCFF148IOT.bigWig bigWig (minus strand signal of unique reads) 10.3 MB
ENCFF151VUB.bed bed (peaks) 894.9 KB
ENCFF161RAP.bed bed (peaks) 206.0 KB
ENCFF175TMY.fastq fastq (reads) 463.0 MB
ENCFF182RWR.bed bed (peaks) 1.3 MB
ENCFF185BYE.bed bed (peaks) 587.3 KB
ENCFF185KMM.bed bed (peaks) 494.3 KB
ENCFF258KDH.bigWig bigWig (plus strand signal of unique reads) 10.8 MB
ENCFF260XAL.bigWig bigWig (plus strand signal of unique reads) 14.8 MB
ENCFF287BQY.bigWig bigWig (plus strand signal of unique reads) 14.4 MB
ENCFF384BDA.fastq fastq (reads) 452.6 MB
ENCFF391ZFR.bigBed bigBed (peaks) 1.9 MB
ENCFF410UTY.bam bam (alignments) 172.3 MB
ENCFF447WDR.fastq fastq (reads) 549.8 MB
ENCFF456SGZ.bigWig bigWig (minus strand signal of unique reads) 14.0 MB
ENCFF533RZJ.bigBed bigBed (peaks) 2.7 MB
ENCFF553VND.bigBed bigBed (peaks) 433.6 KB
ENCFF588HPG.bigBed bigBed (peaks) 1.3 MB
ENCFF594WHT.bed bed (peaks) 1.3 MB
ENCFF620MFE.bam bam (alignments) 257.6 MB
ENCFF649URS.bigBed bigBed (peaks) 961.1 KB
ENCFF791QDL.bigWig bigWig (minus strand signal of unique reads) 7.5 MB
ENCFF875QBF.bed bed (peaks) 58.8 KB
ENCFF921PTG.fastq fastq (reads) 575.0 MB
ENCFF992XQV.bigWig bigWig (plus strand signal of unique reads) 10.3 MB
ENCFF996BAB.bigBed bigBed (peaks) 555.7 KB
ENCSR041NUV ENCSR via encode_api

eCLIP experiment on HepG2 against EIF3D

Homo sapiens
36 data files
FileTypeSize
ENCFF005VCE.bam bam (alignments) 890.3 MB
ENCFF010OYC.bigWig bigWig (minus strand signal of unique reads) 34.5 MB
ENCFF024EQI.fastq fastq (reads) 731.3 MB
ENCFF038GOY.bigBed bigBed (peaks) 1.7 MB
ENCFF048OWX.bigWig bigWig (minus strand signal of unique reads) 38.8 MB
ENCFF056UAW.bed bed (peaks) 17.0 KB
ENCFF099DYI.bigBed bigBed (peaks) 6.4 MB
ENCFF104YAE.bigBed bigBed (peaks) 7.0 MB
ENCFF113AUA.bigBed bigBed (peaks) 678.1 KB
ENCFF130JJX.bed bed (peaks) 16.5 KB
ENCFF187PCO.bam bam (alignments) 774.2 MB
ENCFF197CXZ.bigBed bigBed (peaks) 7.1 MB
ENCFF215APL.bigBed bigBed (peaks) 1.7 MB
ENCFF286YIR.bed bed (peaks) 3.3 MB
ENCFF300MMN.bigWig bigWig (minus strand signal of unique reads) 33.3 MB
ENCFF329LNT.fastq fastq (reads) 765.3 MB
ENCFF344JTJ.bigWig bigWig (minus strand signal of unique reads) 39.7 MB
ENCFF351MQG.bigWig bigWig (plus strand signal of unique reads) 34.5 MB
ENCFF404RAC.bed bed (peaks) 861.0 KB
ENCFF462ECY.bigWig bigWig (plus strand signal of unique reads) 35.8 MB
ENCFF561YDZ.bigBed bigBed (peaks) 3.1 MB
ENCFF576OQO.bam bam (alignments) 860.8 MB
ENCFF650RVF.bed bed (peaks) 3.4 MB
ENCFF678TXO.bam bam (alignments) 737.1 MB
ENCFF733BQQ.bigBed bigBed (peaks) 6.3 MB
ENCFF738CPK.bed bed (peaks) 3.8 MB
ENCFF777URH.bed bed (peaks) 272.4 KB
ENCFF816KHF.bed bed (peaks) 852.7 KB
ENCFF845XMT.bigWig bigWig (plus strand signal of unique reads) 39.6 MB
ENCFF851SIK.fastq fastq (reads) 722.6 MB
ENCFF861AUD.bed bed (peaks) 260.8 KB
ENCFF891XHE.bed bed (peaks) 3.7 MB
ENCFF957IOQ.fastq fastq (reads) 781.5 MB
ENCFF969DSE.bigBed bigBed (peaks) 3.1 MB
ENCFF983NWB.bigBed bigBed (peaks) 655.7 KB
ENCFF991QIX.bigWig bigWig (plus strand signal of unique reads) 40.6 MB
ENCSR571ROL ENCSR via encode_api

eCLIP experiment on HepG2 against XRCC6

Homo sapiens
34 data files
FileTypeSize
ENCFF009YUT.bigWig bigWig (minus strand signal of unique reads) 18.5 MB
ENCFF021CNP.bam bam (alignments) 322.5 MB
ENCFF128IDP.bam bam (alignments) 151.0 MB
ENCFF178YXI.bed bed (peaks) 319.8 KB
ENCFF180FBO.bigWig bigWig (minus strand signal of unique reads) 18.4 MB
ENCFF188CRN.bigWig bigWig (plus strand signal of unique reads) 8.3 MB
ENCFF202EFD.fastq fastq (reads) 256.2 MB
ENCFF202PUU.bigBed bigBed (peaks) 316.9 KB
ENCFF225IXQ.bed bed (peaks) 630.3 KB
ENCFF246PWB.fastq fastq (reads) 275.8 MB
ENCFF311LTM.bigBed bigBed (peaks) 1.2 MB
ENCFF325EMY.bigBed bigBed (peaks) 266.2 KB
ENCFF356JSO.bed bed (peaks) 1.3 MB
ENCFF381LFD.bed bed (peaks) 1.3 MB
ENCFF395BRB.bigWig bigWig (plus strand signal of unique reads) 8.4 MB
ENCFF411CQJ.bigWig bigWig (minus strand signal of unique reads) 8.0 MB
ENCFF438ULK.bam bam (alignments) 319.2 MB
ENCFF464GUK.fastq fastq (reads) 364.5 MB
ENCFF469LWT.bigBed bigBed (peaks) 2.2 MB
ENCFF474WKB.bam bam (alignments) 149.3 MB
ENCFF581MNQ.bigBed bigBed (peaks) 1.2 MB
ENCFF595KXG.bigBed bigBed (peaks) 2.2 MB
ENCFF632XDW.fastq fastq (reads) 394.1 MB
ENCFF656IDO.bed bed (peaks) 2.7 KB
ENCFF728ANU.bigWig bigWig (plus strand signal of unique reads) 18.9 MB
ENCFF730NRC.bed bed (peaks) 263.1 KB
ENCFF779LCF.bigWig bigWig (minus strand signal of unique reads) 8.0 MB
ENCFF798VRH.bigWig bigWig (plus strand signal of unique reads) 18.8 MB
ENCFF862XEI.bed bed (peaks) 629.7 KB
ENCFF863EJQ.bigBed bigBed (peaks) 518.1 KB
ENCFF884KAX.bigBed bigBed (peaks) 698.5 KB
ENCFF907AEP.bed bed (peaks) 96.7 KB
ENCFF965SMN.bed bed (peaks) 107.4 KB
ENCFF993VRZ.bed bed (peaks) 2.8 KB
ENCSR841EQA ENCSR via encode_api

eCLIP experiment on HepG2 against TAF15

Homo sapiens
36 data files
FileTypeSize
ENCFF024UZL.bigBed bigBed (peaks) 394.4 KB
ENCFF034THM.bigWig bigWig (plus strand signal of unique reads) 36.9 MB
ENCFF035UXQ.bigWig bigWig (plus strand signal of unique reads) 39.3 MB
ENCFF060WSO.bigWig bigWig (minus strand signal of unique reads) 35.4 MB
ENCFF063BTH.bed bed (peaks) 3.7 MB
ENCFF185GGV.fastq fastq (reads) 491.7 MB
ENCFF192XSY.fastq fastq (reads) 466.3 MB
ENCFF197QXG.bigBed bigBed (peaks) 1.6 MB
ENCFF206XUM.bigBed bigBed (peaks) 6.7 MB
ENCFF209XXY.bigBed bigBed (peaks) 6.6 MB
ENCFF213AZD.bigBed bigBed (peaks) 6.8 MB
ENCFF285LCL.bed bed (peaks) 156.4 KB
ENCFF383ZAQ.bed bed (peaks) 3.7 MB
ENCFF406ZDR.bigBed bigBed (peaks) 925.4 KB
ENCFF420FTB.bam bam (alignments) 758.7 MB
ENCFF456KCB.fastq fastq (reads) 471.1 MB
ENCFF499RET.bigWig bigWig (minus strand signal of unique reads) 38.1 MB
ENCFF508MEG.bigBed bigBed (peaks) 1.8 MB
ENCFF513PTZ.bed bed (peaks) 14.7 KB
ENCFF552FVV.bigWig bigWig (plus strand signal of unique reads) 38.2 MB
ENCFF566EAE.bed bed (peaks) 15.9 KB
ENCFF603JTU.bed bed (peaks) 3.7 MB
ENCFF626WJW.bed bed (peaks) 443.8 KB
ENCFF660XYR.bed bed (peaks) 164.5 KB
ENCFF701ZSE.bam bam (alignments) 691.5 MB
ENCFF702WRF.bigWig bigWig (minus strand signal of unique reads) 36.0 MB
ENCFF718IXR.fastq fastq (reads) 452.0 MB
ENCFF730OHC.bam bam (alignments) 708.5 MB
ENCFF846YVU.bigWig bigWig (minus strand signal of unique reads) 37.5 MB
ENCFF863MSD.bigWig bigWig (plus strand signal of unique reads) 37.5 MB
ENCFF878VIO.bigBed bigBed (peaks) 6.7 MB
ENCFF883AOS.bed bed (peaks) 479.3 KB
ENCFF899ZEH.bed bed (peaks) 3.6 MB
ENCFF938MSO.bigBed bigBed (peaks) 414.5 KB
ENCFF979UYB.bigBed bigBed (peaks) 858.6 KB
ENCFF981SIK.bam bam (alignments) 776.5 MB
ENCSR947JVR ENCSR via encode_api

eCLIP experiment on K562 against DGCR8

Homo sapiens
36 data files
FileTypeSize
ENCFF015KTU.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF023RGT.bam bam (alignments); assembly: GRCh38 184.2 MB
ENCFF023YVD.bed bed (peaks); assembly: GRCh38 29.2 KB
ENCFF077YUF.bigBed bigBed (peaks); assembly: GRCh38 325.9 KB
ENCFF141IID.bed bed (peaks); assembly: GRCh38 731.5 KB
ENCFF162KZD.fastq fastq (reads) 227.8 MB
ENCFF180COD.bigBed bigBed (peaks); assembly: hg19 649.6 KB
ENCFF205CTB.bed bed (peaks); assembly: GRCh38 130.7 KB
ENCFF239WCW.bed bed (peaks); assembly: hg19 29.1 KB
ENCFF264ODZ.bed bed (peaks); assembly: GRCh38 639.8 KB
ENCFF303NPB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.3 MB
ENCFF311HEG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.9 MB
ENCFF321LLR.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.2 MB
ENCFF349ZQI.bed bed (peaks); assembly: hg19 292.8 KB
ENCFF370UVC.fastq fastq (reads) 212.0 MB
ENCFF402WTV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.1 MB
ENCFF472DEV.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF491LUG.bam bam (alignments); assembly: hg19 173.9 MB
ENCFF555GID.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.5 MB
ENCFF601RGF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.6 MB
ENCFF614EMY.bam bam (alignments); assembly: hg19 184.8 MB
ENCFF642UGL.bigBed bigBed (peaks); assembly: hg19 732.4 KB
ENCFF682SYA.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF712GUN.bed bed (peaks); assembly: GRCh38 111.3 KB
ENCFF719GZA.bigBed bigBed (peaks); assembly: GRCh38 1.2 MB
ENCFF721GOR.bigBed bigBed (peaks); assembly: GRCh38 361.0 KB
ENCFF735UHA.bed bed (peaks); assembly: hg19 641.3 KB
ENCFF752RAX.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF799FTL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.9 MB
ENCFF799XKD.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF843HDQ.bam bam (alignments); assembly: GRCh38 173.1 MB
ENCFF864HVZ.bed bed (peaks); assembly: hg19 343.0 KB
ENCFF887LSX.bed bed (peaks); assembly: hg19 730.6 KB
ENCFF905DBX.fastq fastq (reads) 250.4 MB
ENCFF945ITD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.1 MB
ENCFF969KXX.fastq fastq (reads) 197.9 MB
ENCSR520BZQ ENCSR via encode_api

eCLIP experiment on K562 against HNRNPU

Homo sapiens
36 data files
FileTypeSize
ENCFF014BXV.bed bed (peaks); assembly: hg19 4.4 MB
ENCFF016LPW.bigBed bigBed (peaks); assembly: GRCh38 7.7 MB
ENCFF025YVA.bam bam (alignments); assembly: GRCh38 1.0 GB
ENCFF046DNV.bigBed bigBed (peaks); assembly: hg19 2.3 MB
ENCFF089LNF.fastq fastq (reads) 706.3 MB
ENCFF145GGH.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 50.7 MB
ENCFF145OZZ.fastq fastq (reads) 1.3 GB
ENCFF197OBL.bam bam (alignments); assembly: GRCh38 1.5 GB
ENCFF235IOB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 53.3 MB
ENCFF241DVU.bed bed (peaks); assembly: GRCh38 4.8 KB
ENCFF253HOY.fastq fastq (reads) 718.0 MB
ENCFF260RZZ.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF274WHB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 78.8 MB
ENCFF342RVP.bigBed bigBed (peaks); assembly: GRCh38 569.0 KB
ENCFF382TQQ.bigBed bigBed (peaks); assembly: hg19 9.5 MB
ENCFF384LLO.fastq fastq (reads) 1.2 GB
ENCFF408HQB.bed bed (peaks); assembly: GRCh38 4.5 MB
ENCFF439LWC.bam bam (alignments); assembly: hg19 1.5 GB
ENCFF451BJT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 79.1 MB
ENCFF464SKW.bed bed (peaks); assembly: GRCh38 220.8 KB
ENCFF465SHB.bed bed (peaks); assembly: hg19 630.8 KB
ENCFF496BVF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 75.2 MB
ENCFF588ALN.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 53.4 MB
ENCFF638WUB.bed bed (peaks); assembly: GRCh38 5.8 MB
ENCFF701SGQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 50.6 MB
ENCFF755NIP.bigBed bigBed (peaks); assembly: hg19 7.6 MB
ENCFF759QAQ.bed bed (peaks); assembly: GRCh38 222.4 KB
ENCFF824KTJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 75.1 MB
ENCFF844VZT.bed bed (peaks); assembly: hg19 4.9 KB
ENCFF868OFV.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF881JZG.bam bam (alignments); assembly: hg19 1.0 GB
ENCFF886MQH.bigBed bigBed (peaks); assembly: GRCh38 575.9 KB
ENCFF895OXA.bed bed (peaks); assembly: hg19 608.2 KB
ENCFF901WKP.bigBed bigBed (peaks); assembly: GRCh38 9.6 MB
ENCFF911FOB.bigBed bigBed (peaks); assembly: hg19 2.1 MB
ENCFF960NDY.bed bed (peaks); assembly: hg19 5.8 MB
ENCSR456KXI ENCSR via encode_api

eCLIP experiment on K562 against LARP7

Homo sapiens
36 data files
FileTypeSize
ENCFF017NRG.bed bed (peaks); assembly: hg19 240.1 KB
ENCFF047ETM.bigBed bigBed (peaks); assembly: GRCh38 354.1 KB
ENCFF058MZF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.9 MB
ENCFF076BAY.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.0 MB
ENCFF120VKU.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.0 MB
ENCFF133LPV.bigBed bigBed (peaks); assembly: hg19 521.4 KB
ENCFF177KVZ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.0 MB
ENCFF179RTO.bed bed (peaks); assembly: hg19 188.6 KB
ENCFF208AAW.bed bed (peaks); assembly: hg19 136.2 KB
ENCFF256RGM.fastq fastq (reads) 329.7 MB
ENCFF287TBP.bed bed (peaks); assembly: GRCh38 60.3 KB
ENCFF293MFX.bigBed bigBed (peaks); assembly: hg19 451.1 KB
ENCFF305BNZ.bed bed (peaks); assembly: hg19 6.1 KB
ENCFF320ING.bigBed bigBed (peaks); assembly: hg19 807.2 KB
ENCFF323MGS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.2 MB
ENCFF327HGP.fastq fastq (reads) 291.0 MB
ENCFF467VWG.bed bed (peaks); assembly: GRCh38 84.7 KB
ENCFF473ESV.bam bam (alignments); assembly: hg19 64.3 MB
ENCFF476QFX.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.8 MB
ENCFF476VSU.bam bam (alignments); assembly: GRCh38 50.0 MB
ENCFF507XTS.bigBed bigBed (peaks); assembly: GRCh38 272.3 KB
ENCFF530RLZ.bigBed bigBed (peaks); assembly: hg19 623.7 KB
ENCFF572IJY.bed bed (peaks); assembly: GRCh38 237.1 KB
ENCFF585YVJ.bigBed bigBed (peaks); assembly: GRCh38 516.2 KB
ENCFF604LEG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.2 MB
ENCFF668ETU.bed bed (peaks); assembly: hg19 119.5 KB
ENCFF672QZX.bigBed bigBed (peaks); assembly: hg19 354.2 KB
ENCFF733YZJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.0 MB
ENCFF803VTZ.fastq fastq (reads) 301.8 MB
ENCFF809CKN.bed bed (peaks); assembly: GRCh38 6.2 KB
ENCFF828HOK.bigBed bigBed (peaks); assembly: GRCh38 223.7 KB
ENCFF863HRM.bam bam (alignments); assembly: GRCh38 63.4 MB
ENCFF905YHV.fastq fastq (reads) 269.7 MB
ENCFF918NSS.bam bam (alignments); assembly: hg19 50.2 MB
ENCFF960ILE.bed bed (peaks); assembly: GRCh38 135.8 KB
ENCFF976DNA.bigBed bigBed (peaks); assembly: hg19 331.3 KB
ENCSR916XIV ENCSR via encode_api

eCLIP experiment on HepG2 against EIF3H

Homo sapiens
28 data files
FileTypeSize
ENCFF017NSD.bigWig bigWig (minus strand signal of unique reads) 13.2 MB
ENCFF105SXR.fastq fastq (reads) 671.4 MB
ENCFF135UVS.bam bam (alignments) 211.3 MB
ENCFF146VOH.fastq fastq (reads) 680.1 MB
ENCFF187KFJ.bigBed bigBed (peaks) 3.1 MB
ENCFF218UKP.bigBed bigBed (peaks) 2.1 MB
ENCFF280DFG.bigWig bigWig (plus strand signal of unique reads) 11.7 MB
ENCFF321VYR.bam bam (alignments) 239.6 MB
ENCFF346JBJ.bed bed (peaks) 676.8 KB
ENCFF408PDH.fastq fastq (reads) 653.7 MB
ENCFF430TTF.bigWig bigWig (minus strand signal of unique reads) 11.4 MB
ENCFF479MEO.bigWig bigWig (minus strand signal of unique reads) 13.0 MB
ENCFF487ANP.bigBed bigBed (peaks) 3.1 MB
ENCFF556DEY.bed bed (peaks) 1.5 MB
ENCFF560ZPH.bigWig bigWig (plus strand signal of unique reads) 13.6 MB
ENCFF582LGR.bed bed (peaks) 1.3 MB
ENCFF623SYZ.bed bed (peaks) 1.2 MB
ENCFF633VCU.bigBed bigBed (peaks) 2.1 MB
ENCFF663JWC.bed bed (peaks) 1.1 MB
ENCFF730RYG.bigWig bigWig (plus strand signal of unique reads) 13.4 MB
ENCFF770FPA.bed bed (peaks) 1.5 MB
ENCFF810ZZO.bam bam (alignments) 233.0 MB
ENCFF813JIK.bed bed (peaks) 62.7 KB
ENCFF815GWX.bam bam (alignments) 206.0 MB
ENCFF834HXI.fastq fastq (reads) 680.0 MB
ENCFF860NZS.bigWig bigWig (minus strand signal of unique reads) 11.3 MB
ENCFF862XXR.bigWig bigWig (plus strand signal of unique reads) 11.5 MB
ENCFF928OEC.bed bed (peaks) 63.8 KB
ENCSR277DEO ENCSR via encode_api

eCLIP experiment on HepG2 against NKRF

Homo sapiens
36 data files
FileTypeSize
ENCFF045HSV.bed bed (peaks) 83.1 KB
ENCFF061DTB.bed bed (peaks) 81.5 KB
ENCFF073IXT.bed bed (peaks) 235.6 KB
ENCFF100HIX.bigBed bigBed (peaks) 2.2 MB
ENCFF114ZIN.bed bed (peaks) 700.9 KB
ENCFF143UPB.bigWig bigWig (minus strand signal of unique reads) 22.2 MB
ENCFF144QQC.bam bam (alignments) 739.9 MB
ENCFF150MWZ.bed bed (peaks) 243.9 KB
ENCFF187KJR.bigBed bigBed (peaks) 1.4 MB
ENCFF201DEF.bigBed bigBed (peaks) 1.4 MB
ENCFF233SNH.bed bed (peaks) 3.3 MB
ENCFF250JMP.bigWig bigWig (plus strand signal of unique reads) 22.5 MB
ENCFF271UEZ.bigBed bigBed (peaks) 6.1 MB
ENCFF329YGA.bigBed bigBed (peaks) 622.7 KB
ENCFF391WTM.bam bam (alignments) 425.0 MB
ENCFF430JKC.fastq fastq (reads) 805.2 MB
ENCFF432EVC.bed bed (peaks) 3.3 MB
ENCFF470VYY.bam bam (alignments) 766.2 MB
ENCFF508JRE.bigBed bigBed (peaks) 4.3 MB
ENCFF558SOA.fastq fastq (reads) 819.6 MB
ENCFF623DUI.bed bed (peaks) 2.2 MB
ENCFF660VTK.fastq fastq (reads) 835.6 MB
ENCFF661HMQ.fastq fastq (reads) 790.1 MB
ENCFF668QFJ.bigWig bigWig (plus strand signal of unique reads) 23.6 MB
ENCFF669IOB.bigWig bigWig (minus strand signal of unique reads) 35.3 MB
ENCFF736CTI.bigWig bigWig (minus strand signal of unique reads) 34.5 MB
ENCFF761WJQ.bigBed bigBed (peaks) 617.0 KB
ENCFF781TYW.bigBed bigBed (peaks) 4.2 MB
ENCFF825FWR.bam bam (alignments) 441.7 MB
ENCFF858QEP.bigWig bigWig (plus strand signal of unique reads) 36.6 MB
ENCFF864UGQ.bed bed (peaks) 2.2 MB
ENCFF902GSY.bigBed bigBed (peaks) 6.1 MB
ENCFF930FSZ.bigWig bigWig (minus strand signal of unique reads) 21.4 MB
ENCFF938VWT.bed bed (peaks) 671.6 KB
ENCFF947TZX.bigBed bigBed (peaks) 2.2 MB
ENCFF998EUA.bigWig bigWig (plus strand signal of unique reads) 35.6 MB
ENCSR830BSQ ENCSR via encode_api

eCLIP experiment on HepG2 against BUD13

Homo sapiens
36 data files
FileTypeSize
ENCFF008SOW.bed bed (peaks) 1.1 MB
ENCFF011NAP.bed bed (peaks) 96.8 KB
ENCFF080PGT.bed bed (peaks) 95.8 KB
ENCFF094VWE.bam bam (alignments) 424.7 MB
ENCFF128RBT.bigWig bigWig (plus strand signal of unique reads) 21.1 MB
ENCFF180OLE.bigWig bigWig (minus strand signal of unique reads) 20.3 MB
ENCFF201ZNG.fastq fastq (reads) 845.8 MB
ENCFF248UTB.bigWig bigWig (plus strand signal of unique reads) 21.6 MB
ENCFF272PCV.bed bed (peaks) 1.4 MB
ENCFF277VUW.bigBed bigBed (peaks) 1.1 MB
ENCFF306KVJ.bigBed bigBed (peaks) 2.9 MB
ENCFF350ICY.bigBed bigBed (peaks) 2.2 MB
ENCFF357WBG.bigBed bigBed (peaks) 4.1 MB
ENCFF363NIE.fastq fastq (reads) 811.2 MB
ENCFF364QPG.bed bed (peaks) 2.1 MB
ENCFF380EPE.bigWig bigWig (plus strand signal of unique reads) 22.3 MB
ENCFF399DJZ.bed bed (peaks) 2.1 MB
ENCFF425ASC.bed bed (peaks) 309.8 KB
ENCFF536HGU.bam bam (alignments) 430.3 MB
ENCFF554MZA.bigWig bigWig (minus strand signal of unique reads) 20.8 MB
ENCFF592BEM.bam bam (alignments) 450.8 MB
ENCFF644DWW.bam bam (alignments) 410.5 MB
ENCFF648INU.bigBed bigBed (peaks) 5.1 MB
ENCFF783TZW.bigWig bigWig (minus strand signal of unique reads) 21.0 MB
ENCFF785FUO.bed bed (peaks) 2.1 MB
ENCFF793PYD.fastq fastq (reads) 794.9 MB
ENCFF798IHQ.bigBed bigBed (peaks) 4.1 MB
ENCFF798KOB.bigBed bigBed (peaks) 4.2 MB
ENCFF867ZBM.bigWig bigWig (minus strand signal of unique reads) 21.7 MB
ENCFF893NYT.bigWig bigWig (plus strand signal of unique reads) 21.6 MB
ENCFF913PHX.bed bed (peaks) 469.9 KB
ENCFF918HTG.fastq fastq (reads) 865.2 MB
ENCFF929ITC.bed bed (peaks) 2.1 MB
ENCFF948ZQP.bigBed bigBed (peaks) 4.2 MB
ENCFF950QAW.bigBed bigBed (peaks) 784.7 KB
ENCFF999JJE.bigBed bigBed (peaks) 3.4 MB
ENCSR018RVZ ENCSR via encode_api

eCLIP experiment on HepG2 against NCBP2

Homo sapiens
36 data files
FileTypeSize
ENCFF025VQL.bam bam (alignments) 352.0 MB
ENCFF047YUZ.bed bed (peaks) 1.6 MB
ENCFF064FLX.bigBed bigBed (peaks) 2.6 MB
ENCFF071ZJE.bam bam (alignments) 365.4 MB
ENCFF113ZZQ.bigBed bigBed (peaks) 3.5 MB
ENCFF131GXP.bigWig bigWig (minus strand signal of unique reads) 18.5 MB
ENCFF138FXS.bam bam (alignments) 324.8 MB
ENCFF209YSK.bigBed bigBed (peaks) 4.0 MB
ENCFF235LEG.bed bed (peaks) 754.0 KB
ENCFF245ZKN.bed bed (peaks) 875.3 KB
ENCFF285KVV.bigWig bigWig (minus strand signal of unique reads) 17.5 MB
ENCFF317PCG.bigBed bigBed (peaks) 2.7 MB
ENCFF325QVX.bed bed (peaks) 308.4 KB
ENCFF344GLJ.bigBed bigBed (peaks) 670.7 KB
ENCFF352SYT.bigWig bigWig (plus strand signal of unique reads) 18.1 MB
ENCFF355UYF.bed bed (peaks) 2.0 MB
ENCFF401JCV.bigBed bigBed (peaks) 3.0 MB
ENCFF430WSO.bigBed bigBed (peaks) 744.8 KB
ENCFF442XFF.bigWig bigWig (minus strand signal of unique reads) 18.0 MB
ENCFF444ZHJ.fastq fastq (reads) 883.5 MB
ENCFF456PLF.bed bed (peaks) 71.0 KB
ENCFF457IKB.bam bam (alignments) 342.2 MB
ENCFF500HBQ.bed bed (peaks) 2.0 MB
ENCFF656KCR.bigBed bigBed (peaks) 1.6 MB
ENCFF683SQV.bigWig bigWig (minus strand signal of unique reads) 16.9 MB
ENCFF692RZM.bed bed (peaks) 70.5 KB
ENCFF725TVC.bigBed bigBed (peaks) 1.9 MB
ENCFF731KNX.fastq fastq (reads) 560.7 MB
ENCFF838SXG.fastq fastq (reads) 604.5 MB
ENCFF841ZMA.fastq fastq (reads) 821.5 MB
ENCFF843UUO.bigBed bigBed (peaks) 4.0 MB
ENCFF861WKP.bigWig bigWig (plus strand signal of unique reads) 19.6 MB
ENCFF890DWK.bigWig bigWig (plus strand signal of unique reads) 17.4 MB
ENCFF928PFE.bigWig bigWig (plus strand signal of unique reads) 19.1 MB
ENCFF933CZY.bed bed (peaks) 1.6 MB
ENCFF979OOP.bed bed (peaks) 346.5 KB
ENCSR506OTC ENCSR via encode_api

eCLIP experiment on K562 against TBRG4

Homo sapiens
36 data files
FileTypeSize
ENCFF003ZMM.bigWig bigWig (minus strand signal of unique reads) 12.1 MB
ENCFF023SWE.bigBed bigBed (peaks) 2.0 MB
ENCFF032WIK.bigBed bigBed (peaks) 442.2 KB
ENCFF033ZLA.bed bed (peaks) 1.2 MB
ENCFF040CEA.bed bed (peaks) 1.3 MB
ENCFF165REA.bigWig bigWig (plus strand signal of unique reads) 12.8 MB
ENCFF228JVS.bigBed bigBed (peaks) 992.6 KB
ENCFF251OAT.bed bed (peaks) 498.0 KB
ENCFF259AFA.bam bam (alignments) 141.3 MB
ENCFF273ZJR.bam bam (alignments) 226.8 MB
ENCFF302CMM.bigBed bigBed (peaks) 2.0 MB
ENCFF307XYP.bam bam (alignments) 239.0 MB
ENCFF345TKW.fastq fastq (reads) 719.7 MB
ENCFF352HDR.bigBed bigBed (peaks) 462.6 KB
ENCFF371AWB.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCFF399OEH.fastq fastq (reads) 748.9 MB
ENCFF412KGD.bigWig bigWig (plus strand signal of unique reads) 6.5 MB
ENCFF422MXC.bed bed (peaks) 230.0 KB
ENCFF433EPL.bigBed bigBed (peaks) 2.1 MB
ENCFF445ALF.bigWig bigWig (plus strand signal of unique reads) 6.7 MB
ENCFF460SUH.bigBed bigBed (peaks) 2.5 MB
ENCFF475YXN.bigBed bigBed (peaks) 2.2 MB
ENCFF509AKB.bed bed (peaks) 8.7 KB
ENCFF577BHE.bigBed bigBed (peaks) 2.0 MB
ENCFF582GSU.fastq fastq (reads) 786.5 MB
ENCFF618WYU.bed bed (peaks) 7.9 KB
ENCFF687IPT.bigWig bigWig (minus strand signal of unique reads) 6.2 MB
ENCFF734UNZ.bed bed (peaks) 1.2 MB
ENCFF740LLA.bigWig bigWig (minus strand signal of unique reads) 6.3 MB
ENCFF769QMS.bigWig bigWig (minus strand signal of unique reads) 12.6 MB
ENCFF813VYB.bed bed (peaks) 1.3 MB
ENCFF894RPF.fastq fastq (reads) 687.8 MB
ENCFF910QNU.bam bam (alignments) 146.2 MB
ENCFF938YIS.bigBed bigBed (peaks) 1.2 MB
ENCFF966QXY.bed bed (peaks) 620.2 KB
ENCFF994FBZ.bed bed (peaks) 172.2 KB
ENCSR724RDN ENCSR via encode_api

eCLIP experiment on HepG2 against HNRNPL

Homo sapiens
26 data files
FileTypeSize
ENCFF033PSX.bigBed bigBed (peaks) 1.3 MB
ENCFF038OQW.bigWig bigWig (minus strand signal of unique reads) 29.7 MB
ENCFF058KFE.bigWig bigWig (plus strand signal of unique reads) 31.4 MB
ENCFF073PCD.bed bed (peaks) 4.3 MB
ENCFF081VYS.fastq fastq (reads) 686.5 MB
ENCFF103PRM.bed bed (peaks) 2.9 MB
ENCFF118UDX.bigWig bigWig (minus strand signal of unique reads) 41.4 MB
ENCFF149UBH.fastq fastq (reads) 509.7 MB
ENCFF196CQK.bigWig bigWig (plus strand signal of unique reads) 29.5 MB
ENCFF229ZCQ.bigWig bigWig (minus strand signal of unique reads) 31.3 MB
ENCFF236KJO.bigBed bigBed (peaks) 1.8 MB
ENCFF238ELZ.bigWig bigWig (plus strand signal of unique reads) 42.3 MB
ENCFF242YTA.fastq fastq (reads) 489.6 MB
ENCFF266TKW.bed bed (peaks) 209.6 KB
ENCFF306SPZ.bigWig bigWig (plus strand signal of unique reads) 40.4 MB
ENCFF415HDB.bed bed (peaks) 3.0 MB
ENCFF518JBW.bam bam (alignments) 928.8 MB
ENCFF581SSQ.bed bed (peaks) 4.3 MB
ENCFF607WID.bam bam (alignments) 669.4 MB
ENCFF761PZC.fastq fastq (reads) 666.5 MB
ENCFF804QLX.bigWig bigWig (minus strand signal of unique reads) 40.2 MB
ENCFF819VZW.bigBed bigBed (peaks) 7.7 MB
ENCFF840DTR.bam bam (alignments) 964.4 MB
ENCFF890KEE.bed bed (peaks) 212.3 KB
ENCFF894SMP.bam bam (alignments) 716.5 MB
ENCFF942HMV.bigBed bigBed (peaks) 5.4 MB
ENCSR861PAR ENCSR via encode_api

eCLIP experiment on K562 against NONO

Homo sapiens
36 data files
FileTypeSize
ENCFF008LDP.fastq fastq (reads) 429.3 MB
ENCFF011XRH.bigWig bigWig (minus strand signal of unique reads) 27.4 MB
ENCFF015HGB.bigWig bigWig (plus strand signal of unique reads) 30.0 MB
ENCFF043RMQ.bigWig bigWig (plus strand signal of unique reads) 24.8 MB
ENCFF060IHO.bed bed (peaks) 2.5 MB
ENCFF096AMS.bigBed bigBed (peaks) 1.1 MB
ENCFF109GPL.fastq fastq (reads) 449.9 MB
ENCFF171ATE.bam bam (alignments) 583.9 MB
ENCFF174MVU.bed bed (peaks) 2.6 MB
ENCFF187PFP.bigBed bigBed (peaks) 491.2 KB
ENCFF201YQC.bed bed (peaks) 2.0 MB
ENCFF224NTR.bam bam (alignments) 472.0 MB
ENCFF227ESJ.bigBed bigBed (peaks) 1.1 MB
ENCFF255PSA.bed bed (peaks) 517.7 KB
ENCFF351ATM.bam bam (alignments) 559.2 MB
ENCFF363HHT.bed bed (peaks) 231.0 KB
ENCFF444YFD.bigBed bigBed (peaks) 3.6 MB
ENCFF453WXP.bed bed (peaks) 171.2 KB
ENCFF465GNT.bigBed bigBed (peaks) 506.9 KB
ENCFF591MNK.bigBed bigBed (peaks) 1.8 MB
ENCFF661NXQ.bigWig bigWig (minus strand signal of unique reads) 23.3 MB
ENCFF671OSS.bed bed (peaks) 1.9 MB
ENCFF715MPQ.bigWig bigWig (plus strand signal of unique reads) 29.1 MB
ENCFF724ERL.fastq fastq (reads) 426.7 MB
ENCFF730QRI.bed bed (peaks) 230.2 KB
ENCFF744ULL.bigWig bigWig (minus strand signal of unique reads) 28.2 MB
ENCFF851XUN.bigBed bigBed (peaks) 3.7 MB
ENCFF873XLH.bed bed (peaks) 178.6 KB
ENCFF876EXN.bigWig bigWig (plus strand signal of unique reads) 25.7 MB
ENCFF877UPN.bed bed (peaks) 508.3 KB
ENCFF888NYK.bam bam (alignments) 448.8 MB
ENCFF896KWG.fastq fastq (reads) 467.2 MB
ENCFF898CPC.bigBed bigBed (peaks) 1.8 MB
ENCFF918YLZ.bigBed bigBed (peaks) 4.6 MB
ENCFF938HFA.bigBed bigBed (peaks) 4.7 MB
ENCFF967JAL.bigWig bigWig (minus strand signal of unique reads) 24.0 MB
ENCSR663WES ENCSR via encode_api

eCLIP experiment on K562 against BUD13

Homo sapiens
36 data files
FileTypeSize
ENCFF019MEC.bigWig bigWig (plus strand signal of unique reads) 33.8 MB
ENCFF075JPD.bigBed bigBed (peaks) 953.0 KB
ENCFF086LQG.bam bam (alignments) 648.3 MB
ENCFF089RQT.bed bed (peaks) 1.3 MB
ENCFF096XGF.bed bed (peaks) 416.4 KB
ENCFF102QYZ.bed bed (peaks) 2.7 MB
ENCFF104FKE.bam bam (alignments) 726.6 MB
ENCFF130YZF.bam bam (alignments) 662.6 MB
ENCFF163UZA.bigWig bigWig (minus strand signal of unique reads) 30.0 MB
ENCFF172PJO.bigBed bigBed (peaks) 2.6 MB
ENCFF180PES.bigBed bigBed (peaks) 5.2 MB
ENCFF191VIT.bigWig bigWig (minus strand signal of unique reads) 33.0 MB
ENCFF209IGU.bigBed bigBed (peaks) 965.6 KB
ENCFF224CWV.bigWig bigWig (plus strand signal of unique reads) 31.1 MB
ENCFF262ILV.bed bed (peaks) 186.5 KB
ENCFF262ZDM.bigWig bigWig (minus strand signal of unique reads) 32.7 MB
ENCFF318ADU.fastq fastq (reads) 775.4 MB
ENCFF333JSY.bigBed bigBed (peaks) 4.9 MB
ENCFF391LND.bigBed bigBed (peaks) 4.9 MB
ENCFF399NVU.bed bed (peaks) 421.0 KB
ENCFF419MOS.bed bed (peaks) 2.8 MB
ENCFF437NSG.bigBed bigBed (peaks) 4.4 MB
ENCFF545BFR.fastq fastq (reads) 776.5 MB
ENCFF560OAU.bed bed (peaks) 2.6 MB
ENCFF563BNB.bam bam (alignments) 711.6 MB
ENCFF592QRP.bigBed bigBed (peaks) 5.2 MB
ENCFF608MEF.fastq fastq (reads) 780.4 MB
ENCFF630WRX.bigBed bigBed (peaks) 2.5 MB
ENCFF651CNX.bed bed (peaks) 176.7 KB
ENCFF659LQY.bigWig bigWig (minus strand signal of unique reads) 29.7 MB
ENCFF682OHZ.bigWig bigWig (plus strand signal of unique reads) 34.1 MB
ENCFF790VRM.bigBed bigBed (peaks) 4.5 MB
ENCFF807GJE.bed bed (peaks) 2.6 MB
ENCFF879YZY.bigWig bigWig (plus strand signal of unique reads) 30.8 MB
ENCFF880RKG.bed bed (peaks) 1.3 MB
ENCFF912DJK.fastq fastq (reads) 777.9 MB
ENCSR303OQD ENCSR via encode_api

eCLIP experiment on K562 against METAP2

Homo sapiens
36 data files
FileTypeSize
ENCFF041HMB.bed bed (peaks) 1.1 MB
ENCFF084TRE.bigWig bigWig (plus strand signal of unique reads) 14.9 MB
ENCFF114TRH.bed bed (peaks) 222.9 KB
ENCFF130LEJ.bam bam (alignments) 216.5 MB
ENCFF135TAD.bed bed (peaks) 1.3 MB
ENCFF136TZL.fastq fastq (reads) 560.3 MB
ENCFF217PNK.bed bed (peaks) 681.7 KB
ENCFF227VPH.bigBed bigBed (peaks) 2.3 MB
ENCFF232SDJ.bigWig bigWig (minus strand signal of unique reads) 14.4 MB
ENCFF239NBV.bigBed bigBed (peaks) 2.7 MB
ENCFF255JDZ.fastq fastq (reads) 784.9 MB
ENCFF297FFH.bigBed bigBed (peaks) 2.3 MB
ENCFF305KBN.fastq fastq (reads) 749.5 MB
ENCFF385LMB.fastq fastq (reads) 568.3 MB
ENCFF449HWV.bigWig bigWig (plus strand signal of unique reads) 15.1 MB
ENCFF460RUI.bed bed (peaks) 239.5 KB
ENCFF468ZMC.bam bam (alignments) 274.0 MB
ENCFF525AOF.bigWig bigWig (minus strand signal of unique reads) 11.4 MB
ENCFF525SAA.bigBed bigBed (peaks) 1.6 MB
ENCFF532HRN.bigBed bigBed (peaks) 500.8 KB
ENCFF565BTR.bed bed (peaks) 67.8 KB
ENCFF644LPB.bed bed (peaks) 68.6 KB
ENCFF662GNC.bam bam (alignments) 221.7 MB
ENCFF668JDW.bigBed bigBed (peaks) 1.4 MB
ENCFF727RJA.bed bed (peaks) 1.3 MB
ENCFF757XSC.bigWig bigWig (minus strand signal of unique reads) 11.5 MB
ENCFF821QWP.bam bam (alignments) 268.2 MB
ENCFF840QOI.bigBed bigBed (peaks) 2.3 MB
ENCFF864WUG.bigWig bigWig (plus strand signal of unique reads) 12.0 MB
ENCFF877NAI.bigBed bigBed (peaks) 2.7 MB
ENCFF883EUE.bigBed bigBed (peaks) 2.5 MB
ENCFF962CKJ.bed bed (peaks) 1.1 MB
ENCFF971FWU.bigWig bigWig (minus strand signal of unique reads) 14.5 MB
ENCFF971IPK.bigBed bigBed (peaks) 530.3 KB
ENCFF982ATU.bigWig bigWig (plus strand signal of unique reads) 12.1 MB
ENCFF994AMX.bed bed (peaks) 743.1 KB
ENCSR565DGW ENCSR via encode_api

eCLIP experiment on HepG2 against DHX30

Homo sapiens
34 data files
FileTypeSize
ENCFF049PPF.bigBed bigBed (peaks); assembly: hg19 1.7 MB
ENCFF061CZT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.3 MB
ENCFF098AQK.bed bed (peaks); assembly: hg19 469.3 KB
ENCFF143TAM.bed bed (peaks); assembly: GRCh38 1.2 MB
ENCFF172NCN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.4 MB
ENCFF174FQS.bed bed (peaks); assembly: hg19 420.1 KB
ENCFF183AUG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 8.3 MB
ENCFF190UCK.bed bed (peaks); assembly: GRCh38 941.3 KB
ENCFF191HRQ.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF233ZXV.bed bed (peaks); assembly: hg19 4.3 KB
ENCFF259ZLG.bam bam (alignments); assembly: hg19 215.5 MB
ENCFF294OYP.bigBed bigBed (peaks); assembly: GRCh38 1.6 MB
ENCFF381HWO.bed bed (peaks); assembly: GRCh38 159.2 KB
ENCFF431RWW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 8.4 MB
ENCFF506NPG.bed bed (peaks); assembly: hg19 975.2 KB
ENCFF508MIM.bigBed bigBed (peaks); assembly: GRCh38 408.2 KB
ENCFF523LNK.bigBed bigBed (peaks); assembly: GRCh38 2.1 MB
ENCFF600ILL.bigBed bigBed (peaks); assembly: GRCh38 394.4 KB
ENCFF663QIZ.bed bed (peaks); assembly: GRCh38 4.4 KB
ENCFF678OCJ.bam bam (alignments); assembly: hg19 276.9 MB
ENCFF686GZG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.7 MB
ENCFF705YYZ.bam bam (alignments); assembly: GRCh38 267.3 MB
ENCFF718GOT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.0 MB
ENCFF797NFN.fastq fastq (reads) 652.1 MB
ENCFF809XHX.bam bam (alignments); assembly: GRCh38 205.5 MB
ENCFF827KOV.fastq fastq (reads) 706.6 MB
ENCFF831CXB.fastq fastq (reads) 709.6 MB
ENCFF864ZAU.bed bed (peaks); assembly: GRCh38 144.7 KB
ENCFF914TDS.bigBed bigBed (peaks); assembly: hg19 2.1 MB
ENCFF921CGQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.6 MB
ENCFF930QLC.bigBed bigBed (peaks); assembly: hg19 923.9 KB
ENCFF942GGL.bigBed bigBed (peaks); assembly: hg19 867.0 KB
ENCFF969FSD.fastq fastq (reads) 653.0 MB
ENCFF974MYW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.0 MB
ENCSR568DZW ENCSR via encode_api

eCLIP experiment on K562 against TAF15

Homo sapiens
36 data files
FileTypeSize
ENCFF008QVV.bed bed (peaks); assembly: GRCh38 122.4 KB
ENCFF044RGH.bam bam (alignments); assembly: GRCh38 422.5 MB
ENCFF060GPY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.0 MB
ENCFF064SNG.bed bed (peaks); assembly: GRCh38 122.6 KB
ENCFF111AKF.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF131ZWK.bed bed (peaks); assembly: hg19 12.3 KB
ENCFF211PKX.bigBed bigBed (peaks); assembly: GRCh38 2.8 MB
ENCFF225ZZO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 20.2 MB
ENCFF267QNA.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF284FIC.bigBed bigBed (peaks); assembly: hg19 2.8 MB
ENCFF319ZVV.bigBed bigBed (peaks); assembly: GRCh38 337.4 KB
ENCFF340JJV.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 20.9 MB
ENCFF364URW.fastq fastq (reads) 318.3 MB
ENCFF375MMT.bigBed bigBed (peaks); assembly: GRCh38 2.9 MB
ENCFF409DPS.bed bed (peaks); assembly: GRCh38 1.8 MB
ENCFF476LZT.bigBed bigBed (peaks); assembly: hg19 738.9 KB
ENCFF501PCN.bam bam (alignments); assembly: GRCh38 417.6 MB
ENCFF576QRC.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 21.1 MB
ENCFF614CHS.bigBed bigBed (peaks); assembly: GRCh38 340.4 KB
ENCFF639RAN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 20.6 MB
ENCFF646IFT.fastq fastq (reads) 305.6 MB
ENCFF659WCC.bigBed bigBed (peaks); assembly: hg19 2.8 MB
ENCFF748BCQ.bigBed bigBed (peaks); assembly: hg19 730.7 KB
ENCFF778THT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 21.6 MB
ENCFF783IGF.bed bed (peaks); assembly: hg19 1.8 MB
ENCFF797IKQ.bam bam (alignments); assembly: hg19 422.7 MB
ENCFF798VKV.fastq fastq (reads) 269.7 MB
ENCFF810WKM.bed bed (peaks); assembly: hg19 356.3 KB
ENCFF822NWY.bed bed (peaks); assembly: GRCh38 12.1 KB
ENCFF915ATC.fastq fastq (reads) 346.9 MB
ENCFF932ZIK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 21.6 MB
ENCFF959XVH.bam bam (alignments); assembly: hg19 413.1 MB
ENCFF979IVI.bed bed (peaks); assembly: hg19 1.8 MB
ENCFF985AJE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.4 MB
ENCFF985KXJ.bed bed (peaks); assembly: hg19 360.4 KB
ENCFF996BXS.bed bed (peaks); assembly: GRCh38 1.8 MB
ENCSR916SRV ENCSR via encode_api

eCLIP experiment on HepG2 against TBRG4

Homo sapiens
36 data files
FileTypeSize
ENCFF061HNX.bam bam (alignments); assembly: GRCh38 48.0 MB
ENCFF075EPZ.bed bed (peaks); assembly: hg19 612.3 KB
ENCFF075KBV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.4 MB
ENCFF085PRU.fastq fastq (reads) 469.5 MB
ENCFF116ASC.bam bam (alignments); assembly: hg19 49.4 MB
ENCFF162ZNS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.6 MB
ENCFF189PHS.bam bam (alignments); assembly: GRCh38 60.6 MB
ENCFF261PBE.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.4 MB
ENCFF273POY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.9 MB
ENCFF304YLR.bed bed (peaks); assembly: hg19 2.4 KB
ENCFF348TAB.bed bed (peaks); assembly: GRCh38 1.0 MB
ENCFF406GRV.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 3.1 MB
ENCFF447XXS.fastq fastq (reads) 494.6 MB
ENCFF454ZHL.bed bed (peaks); assembly: hg19 799.3 KB
ENCFF472CCD.bed bed (peaks); assembly: hg19 1.0 MB
ENCFF506KNX.bigBed bigBed (peaks); assembly: GRCh38 773.8 KB
ENCFF539NWB.bed bed (peaks); assembly: GRCh38 443.0 KB
ENCFF583RIE.bed bed (peaks); assembly: hg19 860.2 KB
ENCFF641QIN.bigBed bigBed (peaks); assembly: GRCh38 549.2 KB
ENCFF669MVS.fastq fastq (reads) 537.7 MB
ENCFF691ZGO.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF711EEJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 3.0 MB
ENCFF718RWU.fastq fastq (reads) 572.7 MB
ENCFF721DQT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.5 MB
ENCFF734ODX.bed bed (peaks); assembly: GRCh38 286.8 KB
ENCFF736HGJ.bed bed (peaks); assembly: GRCh38 774.0 KB
ENCFF773UHJ.bigBed bigBed (peaks); assembly: hg19 991.5 KB
ENCFF774EOF.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.9 MB
ENCFF805JUH.bigBed bigBed (peaks); assembly: hg19 1.8 MB
ENCFF805POU.bigBed bigBed (peaks); assembly: hg19 3.7 MB
ENCFF869RUC.bed bed (peaks); assembly: GRCh38 2.4 KB
ENCFF895JLP.bigBed bigBed (peaks); assembly: GRCh38 1.4 MB
ENCFF925OBE.bam bam (alignments); assembly: hg19 63.4 MB
ENCFF979BSQ.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF985WIZ.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF987EOP.bigBed bigBed (peaks); assembly: GRCh38 1.8 MB
ENCSR097NEE ENCSR via encode_api

eCLIP experiment on HepG2 against PPIG

Homo sapiens
35 data files
FileTypeSize
ENCFF065ZXM.bed bed (peaks) 2.4 MB
ENCFF084EON.bigWig bigWig (plus strand signal of unique reads) 20.3 MB
ENCFF112OJJ.bigWig bigWig (plus strand signal of unique reads) 23.8 MB
ENCFF144GBK.bam bam (alignments) 403.1 MB
ENCFF180YNF.bigBed bigBed (peaks) 4.5 MB
ENCFF188WPL.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCFF193XUL.fastq fastq (reads) 775.9 MB
ENCFF236RNG.bigBed bigBed (peaks) 4.6 MB
ENCFF253RQY.bigWig bigWig (minus strand signal of unique reads) 23.5 MB
ENCFF262WDD.bigBed bigBed (peaks) 4.3 MB
ENCFF284MRX.bed bed (peaks) 501.5 KB
ENCFF285DZD.bigBed bigBed (peaks) 3.7 MB
ENCFF315BAC.bed bed (peaks) 1.9 MB
ENCFF343FWV.fastq fastq (reads) 699.9 MB
ENCFF378ELA.bigBed bigBed (peaks) 1.6 MB
ENCFF406VBM.bigBed bigBed (peaks) 4.6 MB
ENCFF424HUO.bed bed (peaks) 656.5 KB
ENCFF463LZD.bigWig bigWig (plus strand signal of unique reads) 19.8 MB
ENCFF472EII.bed bed (peaks) 1.9 MB
ENCFF477APU.fastq fastq (reads) 677.1 MB
ENCFF555MNK.bam bam (alignments) 387.6 MB
ENCFF589ZZZ.bigBed bigBed (peaks) 1.4 MB
ENCFF597JSM.bed bed (peaks) 2.3 MB
ENCFF603DSB.bed bed (peaks) 2.2 MB
ENCFF603KZJ.bigBed bigBed (peaks) 4.2 MB
ENCFF647KKB.fastq fastq (reads) 739.6 MB
ENCFF733DRI.bam bam (alignments) 492.4 MB
ENCFF756NJB.bam bam (alignments) 479.5 MB
ENCFF772NRW.bed bed (peaks) 735.0 KB
ENCFF816PES.bigBed bigBed (peaks) 6.6 MB
ENCFF892PSC.bigWig bigWig (plus strand signal of unique reads) 24.2 MB
ENCFF914TIW.bigWig bigWig (minus strand signal of unique reads) 19.1 MB
ENCFF933GYG.bigWig bigWig (minus strand signal of unique reads) 23.1 MB
ENCFF953KUR.bed bed (peaks) 2.2 MB
ENCFF986XOC.bed bed (peaks) 510.7 KB
ENCSR061SZV ENCSR via encode_api

eCLIP experiment on HepG2 against DGCR8

Homo sapiens
30 data files
FileTypeSize
ENCFF028NKZ.bigWig bigWig (minus strand signal of unique reads) 21.0 MB
ENCFF189ALO.bed bed (peaks) 585.2 KB
ENCFF193URO.bed bed (peaks) 41.3 KB
ENCFF242WEP.bed bed (peaks) 40.1 KB
ENCFF254XWY.bigWig bigWig (plus strand signal of unique reads) 21.8 MB
ENCFF347OGO.fastq fastq (reads) 474.0 MB
ENCFF382SXP.bed bed (peaks) 2.3 MB
ENCFF414UFZ.bam bam (alignments) 551.1 MB
ENCFF420ZZD.fastq fastq (reads) 365.1 MB
ENCFF461HDJ.bigBed bigBed (peaks) 3.6 MB
ENCFF472EOS.bed bed (peaks) 189.3 KB
ENCFF492NNT.bed bed (peaks) 1.7 MB
ENCFF524QNY.bed bed (peaks) 508.6 KB
ENCFF542YWU.fastq fastq (reads) 366.8 MB
ENCFF559WUX.bam bam (alignments) 433.0 MB
ENCFF578BUD.bigBed bigBed (peaks) 2.8 MB
ENCFF648JOL.bigBed bigBed (peaks) 2.8 MB
ENCFF674MHQ.bed bed (peaks) 1.8 MB
ENCFF703NQI.bam bam (alignments) 571.3 MB
ENCFF720NSH.bigWig bigWig (plus strand signal of unique reads) 27.3 MB
ENCFF781EOX.bigWig bigWig (minus strand signal of unique reads) 26.5 MB
ENCFF810XFM.bigWig bigWig (plus strand signal of unique reads) 22.7 MB
ENCFF826SOM.bigWig bigWig (minus strand signal of unique reads) 21.8 MB
ENCFF833NAI.bigWig bigWig (plus strand signal of unique reads) 28.0 MB
ENCFF905UKZ.fastq fastq (reads) 461.5 MB
ENCFF933HUL.bigWig bigWig (minus strand signal of unique reads) 27.2 MB
ENCFF951OAJ.bed bed (peaks) 2.3 MB
ENCFF960NPN.bam bam (alignments) 410.4 MB
ENCFF969WWX.bed bed (peaks) 161.2 KB
ENCFF990NBL.bigBed bigBed (peaks) 3.6 MB
ENCSR023UHL ENCSR via encode_api

eCLIP experiment on HepG2 against FASTKD2

Homo sapiens
34 data files
FileTypeSize
ENCFF024HPG.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF064QSN.bam bam (alignments); assembly: GRCh38 571.3 MB
ENCFF092YPS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 25.1 MB
ENCFF114NAX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 15.6 MB
ENCFF121OYK.bam bam (alignments); assembly: hg19 368.2 MB
ENCFF124DCX.bed bed (peaks); assembly: hg19 651.8 KB
ENCFF125BSO.bed bed (peaks); assembly: GRCh38 334.4 KB
ENCFF128ROY.fastq fastq (reads) 422.2 MB
ENCFF128XPI.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.3 MB
ENCFF132EGC.bigBed bigBed (peaks); assembly: GRCh38 809.3 KB
ENCFF136QLO.bed bed (peaks); assembly: hg19 1.6 MB
ENCFF142KYH.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 16.0 MB
ENCFF173TLB.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF177RJW.bed bed (peaks); assembly: GRCh38 2.4 MB
ENCFF265RIO.bed bed (peaks); assembly: hg19 20.3 KB
ENCFF294NMK.bigBed bigBed (peaks); assembly: hg19 2.2 MB
ENCFF307ZHU.bam bam (alignments); assembly: GRCh38 348.5 MB
ENCFF465QMA.bigBed bigBed (peaks); assembly: hg19 4.7 MB
ENCFF472XVF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 24.6 MB
ENCFF479YXW.bigBed bigBed (peaks); assembly: GRCh38 482.2 KB
ENCFF498IGK.bed bed (peaks); assembly: GRCh38 20.4 KB
ENCFF503DBN.bed bed (peaks); assembly: hg19 2.4 MB
ENCFF528QYR.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 24.0 MB
ENCFF530DLQ.bigBed bigBed (peaks); assembly: GRCh38 4.7 MB
ENCFF540UVX.fastq fastq (reads) 665.8 MB
ENCFF557GSC.bed bed (peaks); assembly: GRCh38 200.5 KB
ENCFF728SIS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 24.5 MB
ENCFF761ZXY.fastq fastq (reads) 426.4 MB
ENCFF776JXK.bigBed bigBed (peaks); assembly: GRCh38 3.1 MB
ENCFF828HJF.bed bed (peaks); assembly: GRCh38 1.5 MB
ENCFF845FUE.bigBed bigBed (peaks); assembly: hg19 3.2 MB
ENCFF891HJO.fastq fastq (reads) 647.7 MB
ENCFF903QKL.bam bam (alignments); assembly: hg19 591.9 MB
ENCFF967TLU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 16.4 MB
ENCSR840DRD ENCSR via encode_api

eCLIP experiment on K562 against CSTF2T

Homo sapiens
36 data files
FileTypeSize
ENCFF042JPC.bigWig bigWig (minus strand signal of unique reads) 22.1 MB
ENCFF043QXI.bed bed (peaks) 1.7 MB
ENCFF050YWD.bed bed (peaks) 1.8 MB
ENCFF051MKE.bed bed (peaks) 284.6 KB
ENCFF072FRJ.bigBed bigBed (peaks) 4.5 MB
ENCFF078LTR.bigWig bigWig (minus strand signal of unique reads) 31.7 MB
ENCFF084JPG.bigWig bigWig (plus strand signal of unique reads) 33.3 MB
ENCFF084WXF.fastq fastq (reads) 485.1 MB
ENCFF106RNO.bam bam (alignments) 444.7 MB
ENCFF106ZUH.bigWig bigWig (minus strand signal of unique reads) 31.6 MB
ENCFF157RJC.bed bed (peaks) 775.7 KB
ENCFF251DNT.fastq fastq (reads) 315.8 MB
ENCFF305FQD.fastq fastq (reads) 299.6 MB
ENCFF321IFP.bed bed (peaks) 622.8 KB
ENCFF330WYG.bigWig bigWig (plus strand signal of unique reads) 23.3 MB
ENCFF370JHA.bigBed bigBed (peaks) 4.5 MB
ENCFF374VAF.bigBed bigBed (peaks) 606.6 KB
ENCFF379UQU.bed bed (peaks) 2.4 MB
ENCFF449NFO.bigWig bigWig (plus strand signal of unique reads) 23.2 MB
ENCFF471LMN.bigWig bigWig (plus strand signal of unique reads) 33.5 MB
ENCFF477YRW.bigWig bigWig (minus strand signal of unique reads) 21.9 MB
ENCFF480LCY.fastq fastq (reads) 460.1 MB
ENCFF513VDW.bam bam (alignments) 663.5 MB
ENCFF536BUW.bed bed (peaks) 231.4 KB
ENCFF633SFR.bed bed (peaks) 226.9 KB
ENCFF647ZVB.bed bed (peaks) 2.5 MB
ENCFF706DYJ.bigBed bigBed (peaks) 2.1 MB
ENCFF708YRH.bigBed bigBed (peaks) 3.4 MB
ENCFF721WXJ.bigBed bigBed (peaks) 1.6 MB
ENCFF775WUQ.bigBed bigBed (peaks) 3.4 MB
ENCFF777EUD.bigBed bigBed (peaks) 702.2 KB
ENCFF821WEB.bigBed bigBed (peaks) 2.9 MB
ENCFF859CZM.bam bam (alignments) 440.0 MB
ENCFF878VVA.bed bed (peaks) 233.2 KB
ENCFF910OVO.bigBed bigBed (peaks) 1.3 MB
ENCFF926RLW.bam bam (alignments) 670.2 MB
ENCSR269AJF ENCSR via encode_api

eCLIP experiment on K562 against RPS11

Homo sapiens
36 data files
FileTypeSize
ENCFF005DWR.fastq fastq (reads) 460.4 MB
ENCFF062WUD.bed bed (peaks) 218.4 KB
ENCFF130YDY.bigWig bigWig (minus strand signal of unique reads) 3.5 MB
ENCFF142OTS.bigWig bigWig (plus strand signal of unique reads) 3.6 MB
ENCFF250NQE.bigBed bigBed (peaks) 338.7 KB
ENCFF268WIE.fastq fastq (reads) 455.5 MB
ENCFF281BTP.bed bed (peaks) 177.6 KB
ENCFF313WDF.bed bed (peaks) 1.3 KB
ENCFF315BEA.bigBed bigBed (peaks) 202.7 KB
ENCFF376NMQ.bigWig bigWig (minus strand signal of unique reads) 3.4 MB
ENCFF390SSK.bigBed bigBed (peaks) 370.7 KB
ENCFF430NNZ.bam bam (alignments) 46.9 MB
ENCFF449AWG.fastq fastq (reads) 479.0 MB
ENCFF463FQZ.fastq fastq (reads) 489.9 MB
ENCFF473UEH.bed bed (peaks) 122.7 KB
ENCFF529LLH.bigBed bigBed (peaks) 496.7 KB
ENCFF553LIK.bigBed bigBed (peaks) 436.2 KB
ENCFF589AXV.bigBed bigBed (peaks) 783.4 KB
ENCFF606CVG.bed bed (peaks) 136.3 KB
ENCFF646GUE.bam bam (alignments) 44.4 MB
ENCFF650CMA.bed bed (peaks) 210.3 KB
ENCFF661HIT.bed bed (peaks) 143.4 KB
ENCFF676SJK.bigWig bigWig (plus strand signal of unique reads) 2.9 MB
ENCFF681CLC.bam bam (alignments) 60.9 MB
ENCFF682ZPF.bed bed (peaks) 69.4 KB
ENCFF696XRM.bigWig bigWig (plus strand signal of unique reads) 3.7 MB
ENCFF744FMW.bigWig bigWig (plus strand signal of unique reads) 3.0 MB
ENCFF750TDL.bigWig bigWig (minus strand signal of unique reads) 2.8 MB
ENCFF803GSP.bed bed (peaks) 880.0 B
ENCFF893JWN.bigBed bigBed (peaks) 482.8 KB
ENCFF895LMB.bed bed (peaks) 52.0 KB
ENCFF896PKL.bam bam (alignments) 58.6 MB
ENCFF920RVJ.bigWig bigWig (minus strand signal of unique reads) 2.9 MB
ENCFF972BYJ.bigBed bigBed (peaks) 241.0 KB
ENCFF980TVG.bigBed bigBed (peaks) 356.3 KB
ENCFF990UDM.bigBed bigBed (peaks) 579.7 KB
ENCSR970NKP ENCSR via encode_api

eCLIP experiment on K562 against Lin28B

Homo sapiens
36 data files
FileTypeSize
ENCFF016VJL.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCFF061XNA.bed bed (peaks) 160.2 KB
ENCFF068KXE.bam bam (alignments) 300.0 MB
ENCFF103UQK.bam bam (alignments) 295.5 MB
ENCFF110KUU.fastq fastq (reads) 324.7 MB
ENCFF134BOJ.bam bam (alignments) 228.8 MB
ENCFF153RAR.bigBed bigBed (peaks) 2.3 MB
ENCFF154GTK.bigBed bigBed (peaks) 3.8 MB
ENCFF156IAN.bigBed bigBed (peaks) 878.4 KB
ENCFF296IQP.bigBed bigBed (peaks) 1.6 MB
ENCFF368HIO.bigBed bigBed (peaks) 2.4 MB
ENCFF379BLS.bigBed bigBed (peaks) 852.9 KB
ENCFF392ANV.bigBed bigBed (peaks) 2.0 MB
ENCFF393PAO.bed bed (peaks) 427.2 KB
ENCFF394QPB.bigWig bigWig (minus strand signal of unique reads) 15.9 MB
ENCFF400LMM.bed bed (peaks) 1.4 MB
ENCFF430TNL.bigWig bigWig (plus strand signal of unique reads) 16.4 MB
ENCFF455ZCD.bed bed (peaks) 403.2 KB
ENCFF492GWE.bam bam (alignments) 231.2 MB
ENCFF493GWT.bigWig bigWig (minus strand signal of unique reads) 13.0 MB
ENCFF514PTU.bigBed bigBed (peaks) 2.0 MB
ENCFF540UOQ.bed bed (peaks) 157.3 KB
ENCFF557FKM.fastq fastq (reads) 261.4 MB
ENCFF594JCF.fastq fastq (reads) 375.2 MB
ENCFF659JYK.bigWig bigWig (minus strand signal of unique reads) 12.9 MB
ENCFF784MYP.bed bed (peaks) 915.3 KB
ENCFF819TBQ.bigBed bigBed (peaks) 1.5 MB
ENCFF823UGV.bed bed (peaks) 1.1 MB
ENCFF823WIW.bed bed (peaks) 1.4 MB
ENCFF857JIT.bigWig bigWig (plus strand signal of unique reads) 13.4 MB
ENCFF892DVI.bed bed (peaks) 1.2 MB
ENCFF923RDJ.bigBed bigBed (peaks) 3.7 MB
ENCFF934ZVJ.bed bed (peaks) 859.7 KB
ENCFF946QER.bigWig bigWig (plus strand signal of unique reads) 16.2 MB
ENCFF954UYJ.bigWig bigWig (minus strand signal of unique reads) 15.7 MB
ENCFF961JRQ.fastq fastq (reads) 233.3 MB
ENCSR623VEQ ENCSR via encode_api

eCLIP experiment on HepG2 against TIA1

Homo sapiens
36 data files
FileTypeSize
ENCFF055IIM.bed bed (peaks) 1.8 MB
ENCFF103OSX.bed bed (peaks) 329.2 KB
ENCFF159BSL.bigBed bigBed (peaks) 2.8 MB
ENCFF181GFC.fastq fastq (reads) 290.1 MB
ENCFF236GOG.bigBed bigBed (peaks) 701.3 KB
ENCFF251QBU.bigBed bigBed (peaks) 2.7 MB
ENCFF258DPQ.bam bam (alignments) 336.4 MB
ENCFF299TLW.bed bed (peaks) 600.2 KB
ENCFF306MBI.bigWig bigWig (plus strand signal of unique reads) 19.0 MB
ENCFF323DFS.bigBed bigBed (peaks) 3.6 MB
ENCFF354DYL.bed bed (peaks) 240.5 KB
ENCFF354GBY.bigBed bigBed (peaks) 561.8 KB
ENCFF358SGV.bed bed (peaks) 2.4 MB
ENCFF378HWC.bed bed (peaks) 2.4 MB
ENCFF482SRR.fastq fastq (reads) 240.5 MB
ENCFF485LRS.bam bam (alignments) 436.2 MB
ENCFF494TGK.bigWig bigWig (plus strand signal of unique reads) 23.0 MB
ENCFF506BUC.fastq fastq (reads) 242.8 MB
ENCFF562ANK.bigWig bigWig (minus strand signal of unique reads) 22.3 MB
ENCFF565TYN.bigBed bigBed (peaks) 1.3 MB
ENCFF573VNX.bigWig bigWig (minus strand signal of unique reads) 18.4 MB
ENCFF640DDA.bed bed (peaks) 39.5 KB
ENCFF643ZXH.fastq fastq (reads) 293.4 MB
ENCFF649UEJ.bigBed bigBed (peaks) 2.9 MB
ENCFF681JJG.bam bam (alignments) 437.1 MB
ENCFF759KCD.bed bed (peaks) 40.4 KB
ENCFF784SLC.bigBed bigBed (peaks) 3.5 MB
ENCFF797HXR.bigWig bigWig (plus strand signal of unique reads) 18.8 MB
ENCFF816ERM.bigBed bigBed (peaks) 2.4 MB
ENCFF834TYG.bigBed bigBed (peaks) 1.1 MB
ENCFF856EHA.bed bed (peaks) 1.8 MB
ENCFF878IQT.bam bam (alignments) 334.9 MB
ENCFF926YVD.bed bed (peaks) 748.7 KB
ENCFF951BGZ.bigWig bigWig (minus strand signal of unique reads) 22.4 MB
ENCFF962KME.bigWig bigWig (minus strand signal of unique reads) 18.0 MB
ENCFF996GFV.bigWig bigWig (plus strand signal of unique reads) 23.1 MB
ENCSR456JJQ ENCSR via encode_api

eCLIP experiment on HepG2 against RBM22

Homo sapiens
36 data files
FileTypeSize
ENCFF026YRT.bigBed bigBed (peaks) 4.7 MB
ENCFF051SNH.bam bam (alignments) 213.3 MB
ENCFF052LHG.bigBed bigBed (peaks) 4.7 MB
ENCFF073CUN.bed bed (peaks) 827.5 KB
ENCFF101GGU.bigWig bigWig (minus strand signal of unique reads) 22.2 MB
ENCFF104SVF.bigBed bigBed (peaks) 2.2 MB
ENCFF125EJB.fastq fastq (reads) 623.1 MB
ENCFF169EKN.bam bam (alignments) 426.6 MB
ENCFF210HLS.fastq fastq (reads) 653.9 MB
ENCFF244TWH.bed bed (peaks) 585.3 KB
ENCFF247QJS.bigBed bigBed (peaks) 1.1 MB
ENCFF251QAT.bigBed bigBed (peaks) 2.2 MB
ENCFF253ZSN.bed bed (peaks) 2.4 MB
ENCFF270GPK.bed bed (peaks) 285.7 KB
ENCFF274HEE.bigWig bigWig (minus strand signal of unique reads) 22.8 MB
ENCFF293IZG.bed bed (peaks) 39.7 KB
ENCFF309YVW.bigBed bigBed (peaks) 2.9 MB
ENCFF312KCQ.bigBed bigBed (peaks) 1.8 MB
ENCFF353XWS.bed bed (peaks) 2.4 MB
ENCFF389OWY.bed bed (peaks) 204.3 KB
ENCFF433TMO.fastq fastq (reads) 959.8 MB
ENCFF445KXO.bigBed bigBed (peaks) 512.6 KB
ENCFF474WPV.bigWig bigWig (minus strand signal of unique reads) 12.5 MB
ENCFF479BEK.bigWig bigWig (plus strand signal of unique reads) 23.1 MB
ENCFF538RDD.bigWig bigWig (plus strand signal of unique reads) 12.9 MB
ENCFF545NBF.bed bed (peaks) 1.3 MB
ENCFF648ZQM.bigWig bigWig (minus strand signal of unique reads) 12.9 MB
ENCFF743SKO.bam bam (alignments) 442.5 MB
ENCFF755XIB.bam bam (alignments) 224.3 MB
ENCFF790SNY.bigBed bigBed (peaks) 636.2 KB
ENCFF812GPZ.bigWig bigWig (plus strand signal of unique reads) 23.7 MB
ENCFF827TLD.fastq fastq (reads) 917.9 MB
ENCFF933AGU.bed bed (peaks) 39.5 KB
ENCFF983BUY.bigBed bigBed (peaks) 2.2 MB
ENCFF990FKM.bigWig bigWig (plus strand signal of unique reads) 13.3 MB
ENCFF990UNN.bed bed (peaks) 1.3 MB
ENCSR774RFN ENCSR via encode_api

eCLIP experiment on K562 against FXR1

Homo sapiens
36 data files
FileTypeSize
ENCFF004KTT.fastq fastq (reads) 366.2 MB
ENCFF070XXP.bam bam (alignments) 341.5 MB
ENCFF089JTT.bigWig bigWig (minus strand signal of unique reads) 19.4 MB
ENCFF122DCP.bigWig bigWig (plus strand signal of unique reads) 18.4 MB
ENCFF139NTN.bigBed bigBed (peaks) 4.2 MB
ENCFF148WUD.bigWig bigWig (minus strand signal of unique reads) 18.0 MB
ENCFF149LXR.bigWig bigWig (plus strand signal of unique reads) 19.8 MB
ENCFF191BRO.fastq fastq (reads) 501.8 MB
ENCFF196IUS.bigBed bigBed (peaks) 635.7 KB
ENCFF205KCE.fastq fastq (reads) 433.1 MB
ENCFF279FKC.bigWig bigWig (plus strand signal of unique reads) 20.1 MB
ENCFF310NDD.bed bed (peaks) 30.7 KB
ENCFF352KYI.bed bed (peaks) 1.5 MB
ENCFF366UJP.bed bed (peaks) 32.1 KB
ENCFF405KWZ.bigBed bigBed (peaks) 2.7 MB
ENCFF464GTB.bed bed (peaks) 1.7 MB
ENCFF573XYN.bed bed (peaks) 1013.7 KB
ENCFF678MSG.bed bed (peaks) 1.5 MB
ENCFF690BKB.bed bed (peaks) 640.5 KB
ENCFF690NJZ.bigBed bigBed (peaks) 2.3 MB
ENCFF704PUC.bed bed (peaks) 1.7 MB
ENCFF716VUM.bam bam (alignments) 407.7 MB
ENCFF738GHM.bigWig bigWig (plus strand signal of unique reads) 18.4 MB
ENCFF784HKJ.bigBed bigBed (peaks) 2.7 MB
ENCFF788NXJ.bed bed (peaks) 305.9 KB
ENCFF830ZKB.bam bam (alignments) 400.4 MB
ENCFF860ALU.bigBed bigBed (peaks) 1.1 MB
ENCFF863OFF.bed bed (peaks) 185.4 KB
ENCFF896JWA.bigBed bigBed (peaks) 445.3 KB
ENCFF915SJY.bigWig bigWig (minus strand signal of unique reads) 17.9 MB
ENCFF918MNJ.bigBed bigBed (peaks) 2.0 MB
ENCFF934VOI.bigWig bigWig (minus strand signal of unique reads) 19.7 MB
ENCFF935NXO.bigBed bigBed (peaks) 2.3 MB
ENCFF949QUY.bam bam (alignments) 339.8 MB
ENCFF953NDG.bigBed bigBed (peaks) 2.5 MB
ENCFF956CKP.fastq fastq (reads) 580.8 MB
ENCSR483NOP ENCSR via encode_api

eCLIP experiment on K562 against SLBP

Homo sapiens
36 data files
FileTypeSize
ENCFF013SZJ.bam bam (alignments); assembly: hg19 35.7 MB
ENCFF036FAN.bam bam (alignments); assembly: hg19 13.2 MB
ENCFF060VZB.bigBed bigBed (peaks); assembly: GRCh38 333.7 KB
ENCFF086ZSG.bigBed bigBed (peaks); assembly: hg19 332.8 KB
ENCFF121TWZ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 894.2 KB
ENCFF127WAK.bed bed (peaks); assembly: GRCh38 142.5 KB
ENCFF138MEW.bed bed (peaks); assembly: GRCh38 70.3 KB
ENCFF192LYD.fastq fastq (reads) 172.4 MB
ENCFF218ZEI.bam bam (alignments); assembly: GRCh38 35.4 MB
ENCFF274ZJK.bigBed bigBed (peaks); assembly: GRCh38 228.1 KB
ENCFF307CYA.bigBed bigBed (peaks); assembly: GRCh38 185.7 KB
ENCFF326UZQ.bed bed (peaks); assembly: hg19 128.1 KB
ENCFF362GBA.bed bed (peaks); assembly: hg19 103.5 KB
ENCFF397VAA.bed bed (peaks); assembly: hg19 104.9 KB
ENCFF403PZD.bigBed bigBed (peaks); assembly: hg19 313.4 KB
ENCFF426SBA.bigBed bigBed (peaks); assembly: hg19 225.5 KB
ENCFF456CGG.bed bed (peaks); assembly: hg19 3.7 KB
ENCFF468AMY.bigBed bigBed (peaks); assembly: GRCh38 180.7 KB
ENCFF511HSJ.bam bam (alignments); assembly: GRCh38 13.1 MB
ENCFF546UYO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 935.0 KB
ENCFF568ULF.bigBed bigBed (peaks); assembly: hg19 599.9 KB
ENCFF613ACW.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 1.9 MB
ENCFF623WGE.bed bed (peaks); assembly: GRCh38 3.8 KB
ENCFF635FOV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 898.0 KB
ENCFF683EWG.bed bed (peaks); assembly: GRCh38 104.1 KB
ENCFF717RDH.bigBed bigBed (peaks); assembly: hg19 742.4 KB
ENCFF791FVU.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 1.8 MB
ENCFF816TIW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 939.6 KB
ENCFF822CCR.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 1.9 MB
ENCFF833YXA.fastq fastq (reads) 244.2 MB
ENCFF835QFU.fastq fastq (reads) 235.1 MB
ENCFF845LMZ.bigBed bigBed (peaks); assembly: hg19 228.7 KB
ENCFF874WRG.bed bed (peaks); assembly: hg19 142.1 KB
ENCFF929QLP.fastq fastq (reads) 181.1 MB
ENCFF957MKS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 1.8 MB
ENCFF962ESE.bed bed (peaks); assembly: GRCh38 73.5 KB
ENCSR867ZVK ENCSR via encode_api

eCLIP experiment on K562 against YWHAG

Homo sapiens
35 data files
FileTypeSize
ENCFF010GZO.fastq fastq (reads) 313.9 MB
ENCFF052ORJ.bam bam (alignments); assembly: GRCh38 163.5 MB
ENCFF094MHA.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.2 MB
ENCFF103TFM.bed bed (peaks); assembly: GRCh38 600.7 KB
ENCFF103UKJ.bigBed bigBed (peaks); assembly: hg19 643.1 KB
ENCFF121YJC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 8.3 MB
ENCFF145AKE.bed bed (peaks); assembly: GRCh38 97.1 KB
ENCFF186FHG.bam bam (alignments); assembly: GRCh38 198.3 MB
ENCFF240CRZ.bed bed (peaks); assembly: hg19 772.3 KB
ENCFF333OBK.bigBed bigBed (peaks); assembly: hg19 745.5 KB
ENCFF352NIP.bam bam (alignments); assembly: hg19 172.6 MB
ENCFF363FKB.bed bed (peaks); assembly: hg19 16.0 KB
ENCFF409XTN.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF437YRG.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF463WLQ.bam bam (alignments); assembly: hg19 207.1 MB
ENCFF467LHB.bed bed (peaks); assembly: hg19 627.1 KB
ENCFF471XES.bed bed (peaks); assembly: GRCh38 120.2 KB
ENCFF482OIF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.9 MB
ENCFF494UNP.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.6 MB
ENCFF498FKK.fastq fastq (reads) 340.5 MB
ENCFF501DYC.bigBed bigBed (peaks); assembly: GRCh38 1.1 MB
ENCFF513RST.bigBed bigBed (peaks); assembly: GRCh38 258.5 KB
ENCFF552DLY.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 8.6 MB
ENCFF692DGH.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 8.8 MB
ENCFF702HCG.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF708WRS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 8.5 MB
ENCFF741UNZ.bed bed (peaks); assembly: GRCh38 751.7 KB
ENCFF780LKE.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF792BRM.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.5 MB
ENCFF803FES.fastq fastq (reads) 319.2 MB
ENCFF806BND.bed bed (peaks); assembly: hg19 356.5 KB
ENCFF878CHN.bigBed bigBed (peaks); assembly: GRCh38 291.5 KB
ENCFF898QZA.bed bed (peaks); assembly: hg19 289.5 KB
ENCFF932UXC.bed bed (peaks); assembly: GRCh38 16.2 KB
ENCFF973PMP.fastq fastq (reads) 360.5 MB
ENCSR240MVJ ENCSR via encode_api

eCLIP experiment on HepG2 against HNRNPU

Homo sapiens
36 data files
FileTypeSize
ENCFF021JPD.bigBed bigBed (peaks); assembly: GRCh38 5.3 MB
ENCFF024FCB.bed bed (peaks); assembly: hg19 2.8 MB
ENCFF039XQD.bed bed (peaks); assembly: GRCh38 7.2 KB
ENCFF040QAV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 29.2 MB
ENCFF053XYY.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 30.3 MB
ENCFF095IVK.bigBed bigBed (peaks); assembly: GRCh38 5.2 MB
ENCFF125EPG.bam bam (alignments); assembly: GRCh38 535.2 MB
ENCFF195JRZ.fastq fastq (reads) 308.9 MB
ENCFF247GMX.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF322ERU.bigBed bigBed (peaks); assembly: hg19 793.6 KB
ENCFF323IDR.bam bam (alignments); assembly: hg19 539.5 MB
ENCFF335HFQ.bed bed (peaks); assembly: GRCh38 135.7 KB
ENCFF382XRS.bed bed (peaks); assembly: GRCh38 2.9 MB
ENCFF383SFO.fastq fastq (reads) 352.3 MB
ENCFF388FMF.bed bed (peaks); assembly: hg19 404.0 KB
ENCFF399JKS.bigBed bigBed (peaks); assembly: GRCh38 361.2 KB
ENCFF441KDR.bigBed bigBed (peaks); assembly: GRCh38 372.9 KB
ENCFF568MGU.bigBed bigBed (peaks); assembly: hg19 5.1 MB
ENCFF587FNW.bed bed (peaks); assembly: hg19 2.8 MB
ENCFF587PLY.bam bam (alignments); assembly: GRCh38 556.7 MB
ENCFF600ZSJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 28.8 MB
ENCFF621JPQ.bed bed (peaks); assembly: GRCh38 2.8 MB
ENCFF624CVO.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF654KQE.bed bed (peaks); assembly: hg19 393.9 KB
ENCFF677NVJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 30.3 MB
ENCFF729IOJ.bigBed bigBed (peaks); assembly: hg19 811.0 KB
ENCFF739PWI.fastq fastq (reads) 388.5 MB
ENCFF751WTI.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 28.9 MB
ENCFF854NXI.bed bed (peaks); assembly: hg19 6.7 KB
ENCFF861LOK.bigBed bigBed (peaks); assembly: hg19 5.2 MB
ENCFF907BAD.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 29.4 MB
ENCFF937XOB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 30.4 MB
ENCFF942SSU.fastq fastq (reads) 320.0 MB
ENCFF957ECH.bed bed (peaks); assembly: GRCh38 142.1 KB
ENCFF958UYK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 30.5 MB
ENCFF979DWE.bam bam (alignments); assembly: hg19 551.0 MB
ENCSR194HZU ENCSR via encode_api

eCLIP experiment on HepG2 against NOLC1

Homo sapiens
29 data files
FileTypeSize
ENCFF041WQX.bigBed bigBed (peaks); assembly: hg19 469.4 KB
ENCFF087PHE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.1 MB
ENCFF091OGJ.fastq fastq (reads) 649.4 MB
ENCFF102DLV.bam bam (alignments); assembly: hg19 184.4 MB
ENCFF127EDI.bed bed (peaks); assembly: hg19 179.8 KB
ENCFF137YFD.bed bed (peaks); assembly: GRCh38 33.1 KB
ENCFF161CIM.fastq fastq (reads) 675.7 MB
ENCFF253RLM.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.2 MB
ENCFF297FNV.bigBed bigBed (peaks); assembly: GRCh38 905.5 KB
ENCFF329FPZ.bam bam (alignments); assembly: GRCh38 132.6 MB
ENCFF405PYI.bam bam (alignments); assembly: GRCh38 175.3 MB
ENCFF414HCO.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.4 MB
ENCFF537BAJ.fastq fastq (reads) 610.6 MB
ENCFF560WXZ.bed bed (peaks); assembly: GRCh38 586.3 KB
ENCFF583EBP.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 4.2 MB
ENCFF633BUL.bed bed (peaks); assembly: hg19 605.5 KB
ENCFF645PLG.bed bed (peaks); assembly: GRCh38 411.4 KB
ENCFF656UJI.fastq fastq (reads) 583.3 MB
ENCFF688RLF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.4 MB
ENCFF688VND.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.3 MB
ENCFF771XSZ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 4.3 MB
ENCFF805JFN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.0 MB
ENCFF840HYK.bam bam (alignments); assembly: hg19 58.4 MB
ENCFF844FIQ.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF845UMK.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF875VXN.bed bed (peaks); assembly: GRCh38 148.8 KB
ENCFF913QWS.bed bed (peaks); assembly: hg19 187.7 KB
ENCFF944ISN.bed bed (peaks); assembly: hg19 27.3 KB
ENCFF984VKQ.bed bed (peaks); assembly: hg19 419.8 KB
ENCSR365NVO ENCSR via encode_api

eCLIP experiment on K562 against TRA2A

Homo sapiens
36 data files
FileTypeSize
ENCFF004IIT.bed bed (peaks); assembly: hg19 38.6 KB
ENCFF059GSO.bed bed (peaks); assembly: hg19 778.8 KB
ENCFF059QDI.bam bam (alignments); assembly: hg19 153.5 MB
ENCFF079XEB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.0 MB
ENCFF086AMC.bigBed bigBed (peaks); assembly: GRCh38 2.3 MB
ENCFF116QDH.fastq fastq (reads) 409.8 MB
ENCFF127SBH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.4 MB
ENCFF149BAF.bed bed (peaks); assembly: GRCh38 173.2 KB
ENCFF159MVB.bam bam (alignments); assembly: GRCh38 224.1 MB
ENCFF222FBC.bam bam (alignments); assembly: hg19 226.3 MB
ENCFF249CGM.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF257VRQ.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF347QRR.bigBed bigBed (peaks); assembly: GRCh38 592.0 KB
ENCFF349CWI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 7.7 MB
ENCFF349ZAH.fastq fastq (reads) 314.0 MB
ENCFF402AIE.bed bed (peaks); assembly: GRCh38 1.1 MB
ENCFF512DWR.bed bed (peaks); assembly: GRCh38 278.6 KB
ENCFF562FJN.bigBed bigBed (peaks); assembly: hg19 925.8 KB
ENCFF608LUC.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 7.4 MB
ENCFF618ZPP.bed bed (peaks); assembly: GRCh38 732.3 KB
ENCFF658CJG.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF661WET.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF669QSB.bigBed bigBed (peaks); assembly: hg19 2.3 MB
ENCFF726PFJ.bed bed (peaks); assembly: GRCh38 38.8 KB
ENCFF731SOH.bigBed bigBed (peaks); assembly: hg19 1.8 MB
ENCFF741JAB.bigBed bigBed (peaks); assembly: GRCh38 426.9 KB
ENCFF744EQP.bed bed (peaks); assembly: hg19 728.7 KB
ENCFF795IGM.fastq fastq (reads) 291.6 MB
ENCFF801MSL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.9 MB
ENCFF830EEK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.5 MB
ENCFF846XXE.bam bam (alignments); assembly: GRCh38 151.5 MB
ENCFF901JTH.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 7.4 MB
ENCFF914PEF.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 7.8 MB
ENCFF917GQR.fastq fastq (reads) 382.4 MB
ENCFF955OEB.bed bed (peaks); assembly: hg19 481.9 KB
ENCFF968HCI.bigBed bigBed (peaks); assembly: hg19 3.1 MB
ENCSR921SXC ENCSR via encode_api

eCLIP experiment on HepG2 against XPO5

Homo sapiens
34 data files
FileTypeSize
ENCFF028MVM.bed bed (peaks); assembly: hg19 1.4 MB
ENCFF032ESQ.bigBed bigBed (peaks); assembly: hg19 3.1 MB
ENCFF039NQM.fastq fastq (reads) 673.6 MB
ENCFF112VQE.bigBed bigBed (peaks); assembly: GRCh38 3.1 MB
ENCFF172XZS.fastq fastq (reads) 604.5 MB
ENCFF207XKP.bam bam (alignments); assembly: GRCh38 285.8 MB
ENCFF327VCE.bed bed (peaks); assembly: GRCh38 96.6 KB
ENCFF332IWJ.bed bed (peaks); assembly: hg19 532.2 KB
ENCFF361YBA.bigBed bigBed (peaks); assembly: hg19 1.0 MB
ENCFF397OKO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.8 MB
ENCFF430YLB.bigBed bigBed (peaks); assembly: hg19 1.0 MB
ENCFF440FET.bed bed (peaks); assembly: hg19 99.6 KB
ENCFF445HUX.bigBed bigBed (peaks); assembly: GRCh38 498.0 KB
ENCFF487LYC.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.2 MB
ENCFF519KSH.bed bed (peaks); assembly: GRCh38 202.3 KB
ENCFF581UJN.bam bam (alignments); assembly: hg19 295.2 MB
ENCFF637FLJ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 14.2 MB
ENCFF647KPG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 15.2 MB
ENCFF679AXS.bam bam (alignments); assembly: hg19 259.9 MB
ENCFF694HBX.bigBed bigBed (peaks); assembly: hg19 2.9 MB
ENCFF756YND.bed bed (peaks); assembly: hg19 1.5 MB
ENCFF764UJQ.bam bam (alignments); assembly: GRCh38 248.8 MB
ENCFF774XBL.bigBed bigBed (peaks); assembly: GRCh38 2.9 MB
ENCFF801OMV.bed bed (peaks); assembly: GRCh38 1.4 MB
ENCFF804WBU.bed bed (peaks); assembly: hg19 545.3 KB
ENCFF805XCR.bigBed bigBed (peaks); assembly: GRCh38 490.6 KB
ENCFF837ZQD.bed bed (peaks); assembly: GRCh38 195.2 KB
ENCFF865ZYB.fastq fastq (reads) 692.3 MB
ENCFF902TPE.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.5 MB
ENCFF927ZQS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.9 MB
ENCFF930GWN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.9 MB
ENCFF957KNE.bed bed (peaks); assembly: GRCh38 1.5 MB
ENCFF979NID.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.6 MB
ENCFF989AWZ.fastq fastq (reads) 618.0 MB
ENCSR206RXT ENCSR via encode_api

eCLIP experiment on K562 against AKAP8L

Homo sapiens
36 data files
FileTypeSize
ENCFF039TMU.bigBed bigBed (peaks); assembly: GRCh38 471.1 KB
ENCFF057QQP.bigBed bigBed (peaks); assembly: GRCh38 445.5 KB
ENCFF071DWM.bed bed (peaks); assembly: GRCh38 1.4 MB
ENCFF078MTW.bed bed (peaks); assembly: GRCh38 184.9 KB
ENCFF091OYS.bed bed (peaks); assembly: GRCh38 2.0 MB
ENCFF127ULN.bam bam (alignments); assembly: hg19 288.9 MB
ENCFF136DYC.bed bed (peaks); assembly: hg19 570.4 KB
ENCFF143KCR.bam bam (alignments); assembly: GRCh38 277.6 MB
ENCFF143UZI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 16.3 MB
ENCFF150FZT.bigBed bigBed (peaks); assembly: GRCh38 4.0 MB
ENCFF178TIK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 17.0 MB
ENCFF189LGT.bed bed (peaks); assembly: hg19 2.1 MB
ENCFF201QGX.bigBed bigBed (peaks); assembly: hg19 4.1 MB
ENCFF202ILW.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF205UTG.bed bed (peaks); assembly: GRCh38 47.5 KB
ENCFF213IET.bed bed (peaks); assembly: GRCh38 194.7 KB
ENCFF228RUA.fastq fastq (reads) 488.3 MB
ENCFF245JZB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 16.4 MB
ENCFF259BMC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 20.5 MB
ENCFF351YUV.bed bed (peaks); assembly: hg19 576.7 KB
ENCFF368HXQ.fastq fastq (reads) 480.9 MB
ENCFF443KRX.fastq fastq (reads) 839.4 MB
ENCFF490GRS.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF577SYV.bigBed bigBed (peaks); assembly: hg19 2.8 MB
ENCFF580SQQ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 21.3 MB
ENCFF609AFL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 21.9 MB
ENCFF642ESE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 21.1 MB
ENCFF670RQS.bigBed bigBed (peaks); assembly: hg19 1.1 MB
ENCFF763JQU.bigBed bigBed (peaks); assembly: GRCh38 2.8 MB
ENCFF778ETC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.8 MB
ENCFF781FPH.bed bed (peaks); assembly: hg19 1.4 MB
ENCFF922LHG.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF923ZLX.bed bed (peaks); assembly: hg19 45.2 KB
ENCFF941NZR.fastq fastq (reads) 822.4 MB
ENCFF941SIX.bam bam (alignments); assembly: GRCh38 407.4 MB
ENCFF977DLI.bam bam (alignments); assembly: hg19 425.5 MB
ENCSR000SSH ENCSR via encode_api

eCLIP experiment on K562 against SLTM

Homo sapiens
36 data files
FileTypeSize
ENCFF018YNA.bigBed bigBed (peaks); assembly: GRCh38 2.2 MB
ENCFF052VSB.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF113JDM.bigBed bigBed (peaks); assembly: GRCh38 2.8 MB
ENCFF125YXW.bed bed (peaks); assembly: GRCh38 1.4 MB
ENCFF142CYB.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF143UZQ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.1 MB
ENCFF206WBW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 15.7 MB
ENCFF207CVG.bigBed bigBed (peaks); assembly: GRCh38 399.2 KB
ENCFF224OZW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 15.7 MB
ENCFF281QMA.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 16.7 MB
ENCFF334ONA.fastq fastq (reads) 299.7 MB
ENCFF373IVQ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.0 MB
ENCFF392CBU.bed bed (peaks); assembly: hg19 1.4 MB
ENCFF396BVL.bam bam (alignments); assembly: GRCh38 223.4 MB
ENCFF405BRH.bam bam (alignments); assembly: hg19 282.3 MB
ENCFF413ZOM.bed bed (peaks); assembly: hg19 564.1 KB
ENCFF419ZVO.bigBed bigBed (peaks); assembly: hg19 2.2 MB
ENCFF470BUR.fastq fastq (reads) 351.0 MB
ENCFF485BRZ.bed bed (peaks); assembly: GRCh38 1.1 MB
ENCFF506XBB.fastq fastq (reads) 318.6 MB
ENCFF525TDH.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF557ZHN.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF579HWA.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.5 MB
ENCFF587QQE.bed bed (peaks); assembly: GRCh38 202.9 KB
ENCFF665PCI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 16.4 MB
ENCFF690BRU.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 13.6 MB
ENCFF693ZAZ.bed bed (peaks); assembly: hg19 70.9 KB
ENCFF696QWE.bed bed (peaks); assembly: GRCh38 73.4 KB
ENCFF712SXL.bam bam (alignments); assembly: GRCh38 277.3 MB
ENCFF760PJU.bigBed bigBed (peaks); assembly: GRCh38 479.6 KB
ENCFF827FAW.bam bam (alignments); assembly: hg19 227.6 MB
ENCFF850ANR.bigBed bigBed (peaks); assembly: hg19 858.6 KB
ENCFF871GKS.bed bed (peaks); assembly: GRCh38 153.0 KB
ENCFF896KIF.fastq fastq (reads) 372.0 MB
ENCFF944JYG.bed bed (peaks); assembly: hg19 432.8 KB
ENCFF990IRK.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCSR907GUB ENCSR via encode_api

eCLIP experiment on HepG2 against ZC3H11A

Homo sapiens
30 data files
FileTypeSize
ENCFF023GYY.bam bam (alignments); assembly: GRCh38 636.9 MB
ENCFF054SDW.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF055TAZ.bed bed (peaks); assembly: hg19 25.5 KB
ENCFF058BHE.bed bed (peaks); assembly: hg19 3.0 MB
ENCFF058CEF.fastq fastq (reads) 709.0 MB
ENCFF064EVY.bigBed bigBed (peaks); assembly: GRCh38 5.9 MB
ENCFF097XMF.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF137HKN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 28.8 MB
ENCFF141VGU.bed bed (peaks); assembly: hg19 3.1 MB
ENCFF225LEZ.bam bam (alignments); assembly: hg19 663.8 MB
ENCFF260RXC.bed bed (peaks); assembly: hg19 712.5 KB
ENCFF309MWT.bigBed bigBed (peaks); assembly: hg19 5.9 MB
ENCFF361GRY.bed bed (peaks); assembly: GRCh38 3.0 MB
ENCFF427HEM.bigBed bigBed (peaks); assembly: GRCh38 5.7 MB
ENCFF454CLN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 33.4 MB
ENCFF458RXV.fastq fastq (reads) 715.0 MB
ENCFF481WSB.fastq fastq (reads) 668.5 MB
ENCFF488BII.bigBed bigBed (peaks); assembly: hg19 5.7 MB
ENCFF581ZSJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 32.6 MB
ENCFF587DYP.bed bed (peaks); assembly: hg19 670.9 KB
ENCFF592WIH.bed bed (peaks); assembly: GRCh38 25.4 KB
ENCFF616NRU.bed bed (peaks); assembly: GRCh38 3.1 MB
ENCFF739NMD.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 30.0 MB
ENCFF784LBV.bam bam (alignments); assembly: hg19 589.0 MB
ENCFF824KNR.fastq fastq (reads) 666.4 MB
ENCFF904WAE.bam bam (alignments); assembly: GRCh38 570.4 MB
ENCFF937ZFS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 33.5 MB
ENCFF959OIY.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 32.1 MB
ENCFF963VRZ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 29.4 MB
ENCFF973WCF.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 28.9 MB
ENCSR989VIY ENCSR via encode_api

eCLIP experiment on HepG2 against SRSF1

Homo sapiens
36 data files
FileTypeSize
ENCFF017IOI.fastq fastq (reads) 392.1 MB
ENCFF105LFK.bed bed (peaks); assembly: hg19 1.2 MB
ENCFF124CAG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 17.5 MB
ENCFF135SKU.bigBed bigBed (peaks); assembly: hg19 3.9 MB
ENCFF150ADU.bigBed bigBed (peaks); assembly: GRCh38 889.2 KB
ENCFF179SCM.bed bed (peaks); assembly: hg19 2.1 MB
ENCFF184TBM.bed bed (peaks); assembly: hg19 1.9 MB
ENCFF207KLW.bigBed bigBed (peaks); assembly: hg19 2.4 MB
ENCFF214HOA.bed bed (peaks); assembly: GRCh38 2.2 MB
ENCFF261GPN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 18.3 MB
ENCFF286FKW.fastq fastq (reads) 318.7 MB
ENCFF327NVE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 22.3 MB
ENCFF372JJP.bigBed bigBed (peaks); assembly: hg19 2.5 MB
ENCFF418ZXO.bam bam (alignments); assembly: GRCh38 347.0 MB
ENCFF476IEL.bigBed bigBed (peaks); assembly: GRCh38 907.7 KB
ENCFF499CNS.bigBed bigBed (peaks); assembly: hg19 4.8 MB
ENCFF508DKJ.bed bed (peaks); assembly: GRCh38 1.9 MB
ENCFF510BQT.bigBed bigBed (peaks); assembly: hg19 5.0 MB
ENCFF522HEA.bigBed bigBed (peaks); assembly: GRCh38 4.2 MB
ENCFF530MIN.bed bed (peaks); assembly: hg19 40.2 KB
ENCFF566KHV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 21.8 MB
ENCFF570HZA.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 21.7 MB
ENCFF745ZQD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 17.6 MB
ENCFF759OGT.bigBed bigBed (peaks); assembly: hg19 4.2 MB
ENCFF787KND.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 18.4 MB
ENCFF806LMS.bed bed (peaks); assembly: GRCh38 435.3 KB
ENCFF816JAS.fastq fastq (reads) 294.7 MB
ENCFF832WNY.bam bam (alignments); assembly: hg19 350.2 MB
ENCFF837EJE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 22.5 MB
ENCFF851FZF.fastq fastq (reads) 423.7 MB
ENCFF867TIG.bam bam (alignments); assembly: GRCh38 476.1 MB
ENCFF934ANS.bed bed (peaks); assembly: GRCh38 40.5 KB
ENCFF937LBT.bigBed bigBed (peaks); assembly: GRCh38 3.9 MB
ENCFF938QXN.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF953OZR.bam bam (alignments); assembly: hg19 480.5 MB
ENCFF977LDY.bed bed (peaks); assembly: GRCh38 458.1 KB
ENCSR845VGB ENCSR via encode_api

eCLIP experiment on HepG2 against DDX55

Homo sapiens
36 data files
FileTypeSize
ENCFF013XEO.bed bed (peaks) 270.7 KB
ENCFF071UFY.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCFF137AEW.bigBed bigBed (peaks) 616.0 KB
ENCFF145NQB.bam bam (alignments) 245.1 MB
ENCFF147YBT.bigBed bigBed (peaks) 1.7 MB
ENCFF163CUI.bed bed (peaks) 1.3 MB
ENCFF315AVG.bed bed (peaks) 1.3 MB
ENCFF318IOH.bigWig bigWig (minus strand signal of unique reads) 5.8 MB
ENCFF337XEL.bigBed bigBed (peaks) 2.7 MB
ENCFF341WEI.fastq fastq (reads) 499.7 MB
ENCFF452KYY.bed bed (peaks) 993.5 KB
ENCFF467XNL.bigBed bigBed (peaks) 2.5 MB
ENCFF472QLC.bigWig bigWig (minus strand signal of unique reads) 12.8 MB
ENCFF487KVA.bigWig bigWig (minus strand signal of unique reads) 13.1 MB
ENCFF584QHX.bed bed (peaks) 1020.6 KB
ENCFF591EQY.bigBed bigBed (peaks) 2.7 MB
ENCFF669BXQ.fastq fastq (reads) 394.3 MB
ENCFF685VYS.bigWig bigWig (plus strand signal of unique reads) 13.5 MB
ENCFF714YUM.bam bam (alignments) 120.0 MB
ENCFF718DYI.fastq fastq (reads) 515.7 MB
ENCFF729RGX.bigBed bigBed (peaks) 682.1 KB
ENCFF735CVF.bigWig bigWig (minus strand signal of unique reads) 5.6 MB
ENCFF744ELJ.bam bam (alignments) 126.2 MB
ENCFF785IRO.bed bed (peaks) 272.8 KB
ENCFF797QRS.bed bed (peaks) 40.7 KB
ENCFF802XHE.fastq fastq (reads) 410.2 MB
ENCFF822NMS.bed bed (peaks) 41.9 KB
ENCFF825UNM.bam bam (alignments) 253.9 MB
ENCFF826KOC.bigBed bigBed (peaks) 1.3 MB
ENCFF839VAS.bigBed bigBed (peaks) 2.5 MB
ENCFF847OFW.bed bed (peaks) 701.8 KB
ENCFF878OMW.bigBed bigBed (peaks) 1.6 MB
ENCFF911SWT.bigWig bigWig (plus strand signal of unique reads) 5.8 MB
ENCFF966QTN.bigWig bigWig (plus strand signal of unique reads) 6.0 MB
ENCFF968WVF.bed bed (peaks) 780.4 KB
ENCFF984LZX.bigBed bigBed (peaks) 1.7 MB
ENCSR484LTQ ENCSR via encode_api

eCLIP experiment on K562 against NCBP2

Homo sapiens
36 data files
FileTypeSize
ENCFF014NHI.bed bed (peaks) 993.6 KB
ENCFF053VCT.fastq fastq (reads) 516.9 MB
ENCFF098RUK.fastq fastq (reads) 566.0 MB
ENCFF111TGW.bigWig bigWig (minus strand signal of unique reads) 5.0 MB
ENCFF158FEQ.bed bed (peaks) 533.2 KB
ENCFF173HHG.bigWig bigWig (minus strand signal of unique reads) 5.3 MB
ENCFF205RFL.fastq fastq (reads) 556.5 MB
ENCFF262QZT.bed bed (peaks) 713.0 KB
ENCFF295NIL.bigBed bigBed (peaks) 413.7 KB
ENCFF308LKS.bam bam (alignments) 176.5 MB
ENCFF312MQE.bed bed (peaks) 526.0 KB
ENCFF341TZE.bigWig bigWig (plus strand signal of unique reads) 5.3 MB
ENCFF354UQN.bigBed bigBed (peaks) 1.7 MB
ENCFF356ZTW.bigBed bigBed (peaks) 1.3 MB
ENCFF446AIP.bigWig bigWig (plus strand signal of unique reads) 11.1 MB
ENCFF481RZR.bed bed (peaks) 9.8 KB
ENCFF509XPD.bed bed (peaks) 747.1 KB
ENCFF515CKZ.bigWig bigWig (plus strand signal of unique reads) 11.5 MB
ENCFF608TLJ.fastq fastq (reads) 606.1 MB
ENCFF614IHL.bigWig bigWig (plus strand signal of unique reads) 5.5 MB
ENCFF615LVG.bigBed bigBed (peaks) 1.0 MB
ENCFF683ATR.bed bed (peaks) 967.2 KB
ENCFF694ETT.bigBed bigBed (peaks) 2.1 MB
ENCFF733DLE.bed bed (peaks) 184.5 KB
ENCFF746QXA.bigWig bigWig (minus strand signal of unique reads) 10.5 MB
ENCFF747VNU.bigBed bigBed (peaks) 1.3 MB
ENCFF771UZR.bam bam (alignments) 184.0 MB
ENCFF781FXC.bigBed bigBed (peaks) 1.7 MB
ENCFF809LTM.bigBed bigBed (peaks) 2.1 MB
ENCFF824QNE.bigWig bigWig (minus strand signal of unique reads) 11.0 MB
ENCFF857UAF.bigBed bigBed (peaks) 393.2 KB
ENCFF863LLP.bigBed bigBed (peaks) 1.0 MB
ENCFF886MLH.bed bed (peaks) 9.7 KB
ENCFF891QNV.bam bam (alignments) 104.9 MB
ENCFF913QVA.bam bam (alignments) 98.7 MB
ENCFF994KXG.bed bed (peaks) 194.4 KB
ENCSR712IAG ENCSR via encode_api

eCLIP experiment on K562 against ZC3H11A

Homo sapiens
30 data files
FileTypeSize
ENCFF002MQE.bed bed (peaks); assembly: hg19 671.7 KB
ENCFF116JFD.bam bam (alignments); assembly: hg19 126.6 MB
ENCFF176BVT.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF179UOO.bigBed bigBed (peaks); assembly: hg19 1.7 MB
ENCFF183AXJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 15.2 MB
ENCFF251XJT.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.9 MB
ENCFF258HOX.bed bed (peaks); assembly: GRCh38 27.3 KB
ENCFF275YSU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 15.6 MB
ENCFF288IBH.bed bed (peaks); assembly: GRCh38 954.9 KB
ENCFF310KBC.bed bed (peaks); assembly: hg19 1.5 MB
ENCFF327WXM.bed bed (peaks); assembly: hg19 28.3 KB
ENCFF368SQA.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF378WQX.fastq fastq (reads) 748.3 MB
ENCFF421XUC.bed bed (peaks); assembly: GRCh38 1.5 MB
ENCFF460TUE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.2 MB
ENCFF462QFK.bam bam (alignments); assembly: hg19 280.8 MB
ENCFF601AWS.bigBed bigBed (peaks); assembly: GRCh38 3.1 MB
ENCFF696WFR.fastq fastq (reads) 496.5 MB
ENCFF709BYW.bam bam (alignments); assembly: GRCh38 120.6 MB
ENCFF715RSI.bam bam (alignments); assembly: GRCh38 270.5 MB
ENCFF716ISC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.7 MB
ENCFF730ZZF.fastq fastq (reads) 538.3 MB
ENCFF733HXI.bigBed bigBed (peaks); assembly: GRCh38 1.7 MB
ENCFF735ZUW.fastq fastq (reads) 683.7 MB
ENCFF771HEF.bigBed bigBed (peaks); assembly: hg19 3.1 MB
ENCFF773UBK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.0 MB
ENCFF849BHF.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 14.7 MB
ENCFF926QBJ.bed bed (peaks); assembly: hg19 628.5 KB
ENCFF929BZH.bed bed (peaks); assembly: hg19 991.4 KB
ENCFF998VWX.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 15.1 MB
ENCSR331MIC ENCSR via encode_api

eCLIP experiment on HepG2 against SF3A3

Homo sapiens
36 data files
FileTypeSize
ENCFF052UWH.bigBed bigBed (peaks) 2.0 MB
ENCFF075FPZ.bed bed (peaks) 795.4 KB
ENCFF085GEZ.bigBed bigBed (peaks) 2.0 MB
ENCFF089XNW.bed bed (peaks) 550.6 KB
ENCFF092NFG.bigWig bigWig (minus strand signal of unique reads) 7.1 MB
ENCFF116IRJ.bigBed bigBed (peaks) 1.0 MB
ENCFF130FUM.bigWig bigWig (plus strand signal of unique reads) 7.6 MB
ENCFF207WMH.bigBed bigBed (peaks) 1.6 MB
ENCFF231UPL.bam bam (alignments) 180.5 MB
ENCFF271SHM.bigBed bigBed (peaks) 498.9 KB
ENCFF274KBX.bigBed bigBed (peaks) 1.4 MB
ENCFF318QPN.fastq fastq (reads) 263.4 MB
ENCFF358LEO.fastq fastq (reads) 314.7 MB
ENCFF410PJY.bam bam (alignments) 174.4 MB
ENCFF444WDD.bigWig bigWig (minus strand signal of unique reads) 7.3 MB
ENCFF466AZB.bigBed bigBed (peaks) 483.5 KB
ENCFF485CDT.bigBed bigBed (peaks) 1.0 MB
ENCFF506HBD.bed bed (peaks) 195.5 KB
ENCFF507QFP.fastq fastq (reads) 305.0 MB
ENCFF515JTZ.bed bed (peaks) 771.7 KB
ENCFF554ZOU.bigWig bigWig (plus strand signal of unique reads) 8.5 MB
ENCFF560LTF.bigWig bigWig (minus strand signal of unique reads) 11.0 MB
ENCFF595XZB.bigWig bigWig (plus strand signal of unique reads) 11.4 MB
ENCFF600LVO.bigWig bigWig (minus strand signal of unique reads) 8.3 MB
ENCFF642VTG.bed bed (peaks) 907.2 KB
ENCFF647LHK.bigBed bigBed (peaks) 1.4 MB
ENCFF654YLH.bed bed (peaks) 887.4 KB
ENCFF693UEN.bigBed bigBed (peaks) 1.5 MB
ENCFF710LWM.bed bed (peaks) 57.2 KB
ENCFF749UHI.bed bed (peaks) 529.6 KB
ENCFF807GZY.bam bam (alignments) 136.8 MB
ENCFF912RGT.bed bed (peaks) 201.5 KB
ENCFF912UMI.fastq fastq (reads) 263.7 MB
ENCFF936CMP.bigWig bigWig (plus strand signal of unique reads) 7.4 MB
ENCFF950VZO.bed bed (peaks) 54.0 KB
ENCFF955MLC.bam bam (alignments) 143.4 MB
ENCSR489ABS ENCSR via encode_api

eCLIP experiment on HepG2 against RBM5

Homo sapiens
30 data files
FileTypeSize
ENCFF068IRI.fastq fastq (reads) 678.0 MB
ENCFF176RGG.bed bed (peaks) 2.2 MB
ENCFF184RSE.bam bam (alignments) 430.1 MB
ENCFF209OHP.bigWig bigWig (plus strand signal of unique reads) 24.4 MB
ENCFF253SAE.fastq fastq (reads) 570.0 MB
ENCFF322ROL.bed bed (peaks) 538.9 KB
ENCFF341GAH.bigBed bigBed (peaks) 1.0 MB
ENCFF351BIN.bigWig bigWig (minus strand signal of unique reads) 23.4 MB
ENCFF391YUD.fastq fastq (reads) 605.3 MB
ENCFF400CFS.bed bed (peaks) 13.0 KB
ENCFF410IRG.bigWig bigWig (minus strand signal of unique reads) 23.7 MB
ENCFF417ZFM.bigBed bigBed (peaks) 4.1 MB
ENCFF428XPR.bed bed (peaks) 179.2 KB
ENCFF429YOO.bigWig bigWig (plus strand signal of unique reads) 24.3 MB
ENCFF545KJU.bam bam (alignments) 425.3 MB
ENCFF569KEZ.bigBed bigBed (peaks) 4.1 MB
ENCFF625KTJ.bigWig bigWig (plus strand signal of unique reads) 24.2 MB
ENCFF655CVS.bigBed bigBed (peaks) 3.4 MB
ENCFF663GBN.bed bed (peaks) 2.2 MB
ENCFF666BXW.bigWig bigWig (minus strand signal of unique reads) 23.9 MB
ENCFF723LQG.bigWig bigWig (minus strand signal of unique reads) 23.3 MB
ENCFF723UHT.bam bam (alignments) 386.7 MB
ENCFF788RFS.bed bed (peaks) 414.1 KB
ENCFF797BGS.fastq fastq (reads) 620.9 MB
ENCFF854DEQ.bigBed bigBed (peaks) 3.4 MB
ENCFF889SGJ.bigWig bigWig (plus strand signal of unique reads) 24.4 MB
ENCFF927KRA.bed bed (peaks) 13.8 KB
ENCFF949ENR.bam bam (alignments) 391.0 MB
ENCFF980CBO.bed bed (peaks) 2.1 MB
ENCFF998ACW.bed bed (peaks) 2.1 MB
ENCSR328LLU ENCSR via encode_api

eCLIP experiment on HepG2 against U2AF1

Homo sapiens
36 data files
FileTypeSize
ENCFF021VWK.bed bed (peaks) 23.9 KB
ENCFF056LEW.bed bed (peaks) 25.1 KB
ENCFF059KEP.bam bam (alignments) 433.3 MB
ENCFF062APM.bam bam (alignments) 439.1 MB
ENCFF078SCZ.bed bed (peaks) 2.3 MB
ENCFF083IKP.bigWig bigWig (minus strand signal of unique reads) 28.3 MB
ENCFF084CWF.fastq fastq (reads) 475.6 MB
ENCFF222RBX.fastq fastq (reads) 425.0 MB
ENCFF249GEL.fastq fastq (reads) 340.7 MB
ENCFF249GHN.bed bed (peaks) 893.9 KB
ENCFF295GHA.bed bed (peaks) 2.8 MB
ENCFF318ITR.bam bam (alignments) 540.2 MB
ENCFF329PEQ.bigBed bigBed (peaks) 5.3 MB
ENCFF357MQS.bigBed bigBed (peaks) 4.4 MB
ENCFF473EDU.bigBed bigBed (peaks) 1.9 MB
ENCFF510QAI.bed bed (peaks) 915.8 KB
ENCFF542NOA.bigWig bigWig (plus strand signal of unique reads) 29.2 MB
ENCFF545ZWD.bed bed (peaks) 2.9 MB
ENCFF553KUR.bigWig bigWig (minus strand signal of unique reads) 28.0 MB
ENCFF560DBY.bigBed bigBed (peaks) 649.4 KB
ENCFF569ESD.fastq fastq (reads) 357.4 MB
ENCFF572HVE.bigBed bigBed (peaks) 665.2 KB
ENCFF580XXM.bed bed (peaks) 302.1 KB
ENCFF587MJX.bigBed bigBed (peaks) 3.2 MB
ENCFF600LTQ.bigWig bigWig (plus strand signal of unique reads) 28.9 MB
ENCFF633PBX.bigBed bigBed (peaks) 5.5 MB
ENCFF651VRQ.bigWig bigWig (plus strand signal of unique reads) 23.2 MB
ENCFF755DUB.bam bam (alignments) 546.2 MB
ENCFF769KHX.bed bed (peaks) 2.3 MB
ENCFF811WVR.bigWig bigWig (plus strand signal of unique reads) 23.4 MB
ENCFF831HSA.bigBed bigBed (peaks) 1.6 MB
ENCFF901KXE.bigWig bigWig (minus strand signal of unique reads) 22.7 MB
ENCFF929VHK.bigWig bigWig (minus strand signal of unique reads) 22.5 MB
ENCFF937SDW.bed bed (peaks) 310.0 KB
ENCFF938PRP.bigBed bigBed (peaks) 3.2 MB
ENCFF980HNZ.bigBed bigBed (peaks) 4.4 MB
ENCSR657TZB ENCSR via encode_api

eCLIP experiment on K562 against XRN2

Homo sapiens
36 data files
FileTypeSize
ENCFF030DDD.bigBed bigBed (peaks) 965.7 KB
ENCFF032DOJ.fastq fastq (reads) 279.4 MB
ENCFF067ZAW.bed bed (peaks) 153.5 KB
ENCFF090XDV.bed bed (peaks) 458.2 KB
ENCFF096SEZ.fastq fastq (reads) 206.0 MB
ENCFF107DSH.fastq fastq (reads) 300.2 MB
ENCFF112LSG.bigBed bigBed (peaks) 2.0 MB
ENCFF123QAQ.bigWig bigWig (plus strand signal of unique reads) 14.4 MB
ENCFF145QGJ.bigWig bigWig (minus strand signal of unique reads) 13.6 MB
ENCFF167DBG.bed bed (peaks) 997.7 KB
ENCFF224NIQ.bigBed bigBed (peaks) 1.7 MB
ENCFF236VEU.bigWig bigWig (plus strand signal of unique reads) 11.7 MB
ENCFF273GAW.bigWig bigWig (plus strand signal of unique reads) 11.9 MB
ENCFF276EIU.bed bed (peaks) 996.4 KB
ENCFF305SDT.bigWig bigWig (plus strand signal of unique reads) 14.2 MB
ENCFF323ABS.bigWig bigWig (minus strand signal of unique reads) 13.5 MB
ENCFF358HNT.bigBed bigBed (peaks) 404.0 KB
ENCFF371PMP.bed bed (peaks) 1.2 MB
ENCFF393URM.bed bed (peaks) 166.0 KB
ENCFF441GJR.bed bed (peaks) 1.2 MB
ENCFF525UQA.bigBed bigBed (peaks) 2.5 MB
ENCFF569CJR.bigBed bigBed (peaks) 423.1 KB
ENCFF630LQE.bam bam (alignments) 184.4 MB
ENCFF679SHX.bigBed bigBed (peaks) 897.9 KB
ENCFF695OLO.bed bed (peaks) 29.4 KB
ENCFF729JHG.bigWig bigWig (minus strand signal of unique reads) 11.2 MB
ENCFF744VLD.bed bed (peaks) 499.9 KB
ENCFF752ZYN.bam bam (alignments) 235.5 MB
ENCFF769RZR.bigWig bigWig (minus strand signal of unique reads) 11.2 MB
ENCFF794JUI.bam bam (alignments) 231.9 MB
ENCFF802LGV.bigBed bigBed (peaks) 2.0 MB
ENCFF808HAX.bigBed bigBed (peaks) 2.5 MB
ENCFF851FUY.bed bed (peaks) 30.6 KB
ENCFF859YFI.bigBed bigBed (peaks) 1.9 MB
ENCFF862IYK.bam bam (alignments) 181.9 MB
ENCFF963JOW.fastq fastq (reads) 192.0 MB
ENCSR301TFY ENCSR via encode_api

eCLIP experiment on HepG2 against DKC1

Homo sapiens
36 data files
FileTypeSize
ENCFF002FLD.bed bed (peaks) 54.2 KB
ENCFF030SOE.bed bed (peaks) 440.5 KB
ENCFF043XKO.bed bed (peaks) 843.2 KB
ENCFF074ATJ.bed bed (peaks) 311.9 KB
ENCFF099IRI.bigWig bigWig (plus strand signal of unique reads) 3.6 MB
ENCFF111YEH.bam bam (alignments) 332.6 MB
ENCFF163AYZ.bigWig bigWig (minus strand signal of unique reads) 3.5 MB
ENCFF192FMW.bigWig bigWig (plus strand signal of unique reads) 11.2 MB
ENCFF252TQP.bam bam (alignments) 321.6 MB
ENCFF268UYC.bed bed (peaks) 114.6 KB
ENCFF404KRN.bigBed bigBed (peaks) 484.8 KB
ENCFF435VZL.bigWig bigWig (plus strand signal of unique reads) 11.5 MB
ENCFF462ZYJ.fastq fastq (reads) 598.5 MB
ENCFF484SFT.bigBed bigBed (peaks) 349.9 KB
ENCFF494NKD.fastq fastq (reads) 623.5 MB
ENCFF502GTY.bigWig bigWig (minus strand signal of unique reads) 10.9 MB
ENCFF507TSG.bigBed bigBed (peaks) 1.7 MB
ENCFF565YYP.fastq fastq (reads) 527.6 MB
ENCFF568RRM.bam bam (alignments) 181.5 MB
ENCFF604AJU.bigBed bigBed (peaks) 973.4 KB
ENCFF633LQC.bed bed (peaks) 53.9 KB
ENCFF648HDL.bed bed (peaks) 173.7 KB
ENCFF701KSH.bigBed bigBed (peaks) 1.7 MB
ENCFF732TFX.bam bam (alignments) 174.3 MB
ENCFF766JDH.bigBed bigBed (peaks) 1.7 MB
ENCFF824DEU.bigBed bigBed (peaks) 697.4 KB
ENCFF841ZPX.bed bed (peaks) 830.0 KB
ENCFF850VGF.fastq fastq (reads) 516.6 MB
ENCFF859KPS.bigWig bigWig (plus strand signal of unique reads) 3.7 MB
ENCFF889WDL.bigWig bigWig (minus strand signal of unique reads) 3.6 MB
ENCFF895VPK.bigWig bigWig (minus strand signal of unique reads) 11.2 MB
ENCFF897PMV.bed bed (peaks) 304.5 KB
ENCFF922HZE.bigBed bigBed (peaks) 1015.4 KB
ENCFF929VXO.bed bed (peaks) 249.4 KB
ENCFF965TAV.bigBed bigBed (peaks) 714.2 KB
ENCFF979PQN.bigBed bigBed (peaks) 608.2 KB
ENCSR815VVI ENCSR via encode_api

eCLIP experiment on HepG2 against CDC40

Homo sapiens
34 data files
FileTypeSize
ENCFF027MEO.bed bed (peaks) 24.5 KB
ENCFF035SSS.bigBed bigBed (peaks) 2.0 MB
ENCFF098MVQ.bigWig bigWig (minus strand signal of unique reads) 25.5 MB
ENCFF115LRN.bigWig bigWig (minus strand signal of unique reads) 26.2 MB
ENCFF134NUB.bed bed (peaks) 1.1 MB
ENCFF160PYB.bigWig bigWig (minus strand signal of unique reads) 13.4 MB
ENCFF171MEK.bam bam (alignments) 563.0 MB
ENCFF204UQL.bed bed (peaks) 25.1 KB
ENCFF282MQX.bam bam (alignments) 251.6 MB
ENCFF294CVK.bigBed bigBed (peaks) 927.8 KB
ENCFF313CFH.bed bed (peaks) 757.8 KB
ENCFF350KRN.bigBed bigBed (peaks) 572.9 KB
ENCFF359LZO.fastq fastq (reads) 1.1 GB
ENCFF373ROO.bigBed bigBed (peaks) 6.0 MB
ENCFF376EVA.fastq fastq (reads) 294.1 MB
ENCFF416LFA.bam bam (alignments) 541.4 MB
ENCFF423FSZ.bed bed (peaks) 136.8 KB
ENCFF513MLD.bed bed (peaks) 3.2 MB
ENCFF570ACD.fastq fastq (reads) 1.2 GB
ENCFF586WCC.bigBed bigBed (peaks) 6.1 MB
ENCFF600TAI.bigWig bigWig (plus strand signal of unique reads) 14.1 MB
ENCFF635KCV.bigBed bigBed (peaks) 2.0 MB
ENCFF684OXK.bed bed (peaks) 3.2 MB
ENCFF751QSR.bigBed bigBed (peaks) 380.9 KB
ENCFF770GEL.bam bam (alignments) 238.3 MB
ENCFF886RPO.fastq fastq (reads) 321.9 MB
ENCFF890AXT.bed bed (peaks) 1.2 MB
ENCFF897ZVJ.bigWig bigWig (plus strand signal of unique reads) 26.8 MB
ENCFF909QKC.bigWig bigWig (plus strand signal of unique reads) 13.4 MB
ENCFF937CBH.bed bed (peaks) 455.4 KB
ENCFF951IZB.bigWig bigWig (plus strand signal of unique reads) 26.0 MB
ENCFF979HRV.bigBed bigBed (peaks) 1.4 MB
ENCFF983HUL.bigWig bigWig (minus strand signal of unique reads) 12.9 MB
ENCFF997VPG.bed bed (peaks) 251.0 KB
ENCSR655NZA ENCSR via encode_api

eCLIP experiment on HepG2 against XRN2

Homo sapiens
36 data files
FileTypeSize
ENCFF005UXB.bigBed bigBed (peaks) 1.6 MB
ENCFF008SMT.fastq fastq (reads) 606.9 MB
ENCFF017XXT.fastq fastq (reads) 643.1 MB
ENCFF104WLX.bigWig bigWig (plus strand signal of unique reads) 9.9 MB
ENCFF142XTJ.bed bed (peaks) 618.2 KB
ENCFF163LXD.bed bed (peaks) 243.9 KB
ENCFF184DUX.fastq fastq (reads) 516.6 MB
ENCFF260PAC.bam bam (alignments) 589.6 MB
ENCFF307RJJ.bam bam (alignments) 175.2 MB
ENCFF321HPH.bed bed (peaks) 34.5 KB
ENCFF410YOZ.bigWig bigWig (minus strand signal of unique reads) 9.4 MB
ENCFF469QZK.bigBed bigBed (peaks) 653.2 KB
ENCFF470XOZ.fastq fastq (reads) 493.0 MB
ENCFF482YSR.bigWig bigWig (minus strand signal of unique reads) 29.8 MB
ENCFF492OPF.bed bed (peaks) 3.3 MB
ENCFF509GIQ.bigWig bigWig (plus strand signal of unique reads) 9.7 MB
ENCFF584DZW.bam bam (alignments) 170.4 MB
ENCFF633AFR.bigBed bigBed (peaks) 2.5 MB
ENCFF651HOR.bigBed bigBed (peaks) 2.3 MB
ENCFF686HZC.bigBed bigBed (peaks) 572.1 KB
ENCFF688YXK.bed bed (peaks) 740.2 KB
ENCFF689OKB.bam bam (alignments) 574.0 MB
ENCFF717EQF.bed bed (peaks) 35.8 KB
ENCFF723HML.bigWig bigWig (plus strand signal of unique reads) 30.3 MB
ENCFF762LTO.bigBed bigBed (peaks) 6.1 MB
ENCFF782AAU.bigWig bigWig (minus strand signal of unique reads) 29.2 MB
ENCFF811KFU.bigBed bigBed (peaks) 6.1 MB
ENCFF832HZS.bed bed (peaks) 251.7 KB
ENCFF844JTH.bigBed bigBed (peaks) 2.5 MB
ENCFF845EBP.bed bed (peaks) 1.2 MB
ENCFF859SGL.bigWig bigWig (minus strand signal of unique reads) 9.5 MB
ENCFF872UNS.bed bed (peaks) 337.6 KB
ENCFF886MNU.bigWig bigWig (plus strand signal of unique reads) 31.3 MB
ENCFF924DCK.bigBed bigBed (peaks) 1.2 MB
ENCFF944KMN.bed bed (peaks) 3.3 MB
ENCFF963GMC.bed bed (peaks) 1.2 MB
ENCSR755TJC ENCSR via encode_api

eCLIP experiment on HepG2 against HNRNPUL1

Homo sapiens
36 data files
FileTypeSize
ENCFF007BKB.fastq fastq (reads) 467.2 MB
ENCFF021KKM.bigWig bigWig (plus strand signal of unique reads) 28.3 MB
ENCFF050RYR.bigBed bigBed (peaks) 1.3 MB
ENCFF076JEG.bam bam (alignments) 403.2 MB
ENCFF124XWE.bigBed bigBed (peaks) 5.1 MB
ENCFF162GIM.bigWig bigWig (minus strand signal of unique reads) 27.2 MB
ENCFF168AGB.fastq fastq (reads) 484.2 MB
ENCFF207VJQ.bigBed bigBed (peaks) 363.9 KB
ENCFF216CTT.bigWig bigWig (minus strand signal of unique reads) 21.3 MB
ENCFF301CMC.bigWig bigWig (plus strand signal of unique reads) 21.9 MB
ENCFF309UEL.bigWig bigWig (minus strand signal of unique reads) 27.2 MB
ENCFF321NHK.bed bed (peaks) 401.1 KB
ENCFF355WVE.bed bed (peaks) 10.0 KB
ENCFF376SOW.bigBed bigBed (peaks) 726.8 KB
ENCFF397PNO.bigBed bigBed (peaks) 793.0 KB
ENCFF398LMC.bam bam (alignments) 522.4 MB
ENCFF407BEZ.bigBed bigBed (peaks) 4.2 MB
ENCFF412WFJ.bigWig bigWig (plus strand signal of unique reads) 21.7 MB
ENCFF439LWA.bed bed (peaks) 120.1 KB
ENCFF487VHA.bed bed (peaks) 2.7 MB
ENCFF536HED.bigWig bigWig (minus strand signal of unique reads) 21.2 MB
ENCFF536XVW.bam bam (alignments) 398.8 MB
ENCFF569CXX.bed bed (peaks) 2.1 MB
ENCFF610JVZ.bed bed (peaks) 10.1 KB
ENCFF648UJC.fastq fastq (reads) 351.2 MB
ENCFF676GXG.bed bed (peaks) 2.1 MB
ENCFF686YHG.bigBed bigBed (peaks) 5.2 MB
ENCFF713PRK.bigWig bigWig (plus strand signal of unique reads) 28.2 MB
ENCFF746NIH.bigBed bigBed (peaks) 1.5 MB
ENCFF779TPK.bed bed (peaks) 348.3 KB
ENCFF801KHR.bed bed (peaks) 2.7 MB
ENCFF831POP.bigBed bigBed (peaks) 4.2 MB
ENCFF867UTV.bed bed (peaks) 140.4 KB
ENCFF956ELY.bam bam (alignments) 520.4 MB
ENCFF956VZN.fastq fastq (reads) 345.9 MB
ENCFF978IYY.bigBed bigBed (peaks) 333.3 KB
ENCSR725ARB ENCSR via encode_api

eCLIP experiment on K562 against AGGF1

Homo sapiens
36 data files
FileTypeSize
ENCFF063NJU.bed bed (peaks) 278.8 KB
ENCFF156RRX.bigWig bigWig (plus strand signal of unique reads) 30.2 MB
ENCFF169SMQ.bed bed (peaks) 116.5 KB
ENCFF237MHV.bigWig bigWig (plus strand signal of unique reads) 5.5 MB
ENCFF239WVK.bigWig bigWig (minus strand signal of unique reads) 5.3 MB
ENCFF243EOW.fastq fastq (reads) 645.9 MB
ENCFF251DMV.bam bam (alignments) 646.0 MB
ENCFF259KQL.bam bam (alignments) 107.3 MB
ENCFF260IXV.bigBed bigBed (peaks) 516.3 KB
ENCFF286KRK.bigBed bigBed (peaks) 912.7 KB
ENCFF290RMT.fastq fastq (reads) 685.3 MB
ENCFF364LOF.bigBed bigBed (peaks) 669.2 KB
ENCFF423IWN.bigBed bigBed (peaks) 4.8 MB
ENCFF450VBG.bed bed (peaks) 479.3 KB
ENCFF468XDE.bigBed bigBed (peaks) 686.3 KB
ENCFF505DQW.fastq fastq (reads) 595.6 MB
ENCFF564VOC.bed bed (peaks) 1.4 MB
ENCFF573SHW.bigBed bigBed (peaks) 4.7 MB
ENCFF587NNZ.bed bed (peaks) 776.0 KB
ENCFF604NYA.bam bam (alignments) 319.8 MB
ENCFF606WSU.bam bam (alignments) 670.4 MB
ENCFF631WUL.bigBed bigBed (peaks) 3.0 MB
ENCFF637HML.bigWig bigWig (minus strand signal of unique reads) 29.1 MB
ENCFF637HZJ.bed bed (peaks) 2.5 MB
ENCFF683KLO.bed bed (peaks) 2.5 MB
ENCFF688PZV.bed bed (peaks) 228.0 KB
ENCFF726ABM.bigWig bigWig (plus strand signal of unique reads) 16.6 MB
ENCFF726SIG.bed bed (peaks) 308.5 KB
ENCFF755MFB.bigWig bigWig (minus strand signal of unique reads) 29.9 MB
ENCFF810NKV.bed bed (peaks) 165.7 KB
ENCFF812FTP.bigWig bigWig (plus strand signal of unique reads) 31.1 MB
ENCFF914VHS.fastq fastq (reads) 731.7 MB
ENCFF936KMM.bigBed bigBed (peaks) 1.6 MB
ENCFF982AXR.bigBed bigBed (peaks) 2.8 MB
ENCFF987ZLP.bigWig bigWig (minus strand signal of unique reads) 16.2 MB
ENCFF993OCR.bigBed bigBed (peaks) 1.2 MB
ENCSR096SZE ENCSR via encode_api

eCLIP control experiment on K562 against PRPF8

Homo sapiens
8 data files
FileTypeSize
ENCFF126WXL.bigWig bigWig (plus strand signal of unique reads) 29.1 MB
ENCFF365IYY.bam bam (alignments) 567.1 MB
ENCFF486ZOM.fastq fastq (reads) 649.7 MB
ENCFF527NLI.bigWig bigWig (plus strand signal of unique reads) 28.9 MB
ENCFF838JNU.bigWig bigWig (minus strand signal of unique reads) 28.0 MB
ENCFF928QRQ.bigWig bigWig (minus strand signal of unique reads) 27.9 MB
ENCFF939HBM.fastq fastq (reads) 627.3 MB
ENCFF947MAG.bam bam (alignments) 569.5 MB
ENCSR196INN ENCSR via encode_api

eCLIP experiment on K562 against RBM15

Homo sapiens
36 data files
FileTypeSize
ENCFF006CBO.bed bed (peaks) 2.2 MB
ENCFF008EYG.fastq fastq (reads) 390.2 MB
ENCFF038CWB.bigWig bigWig (minus strand signal of unique reads) 14.6 MB
ENCFF086HIT.bam bam (alignments) 497.0 MB
ENCFF097EGO.bigWig bigWig (minus strand signal of unique reads) 23.8 MB
ENCFF130EXN.bigBed bigBed (peaks) 4.3 MB
ENCFF141IQY.bigBed bigBed (peaks) 5.2 MB
ENCFF141MFP.bam bam (alignments) 269.4 MB
ENCFF232LTR.bigBed bigBed (peaks) 4.3 MB
ENCFF264WQQ.bigWig bigWig (plus strand signal of unique reads) 15.1 MB
ENCFF275AXU.bigBed bigBed (peaks) 3.1 MB
ENCFF368JSN.bigWig bigWig (plus strand signal of unique reads) 14.8 MB
ENCFF381XNF.bigBed bigBed (peaks) 830.2 KB
ENCFF404OSK.bed bed (peaks) 2.2 MB
ENCFF418DFE.fastq fastq (reads) 647.3 MB
ENCFF452DMI.fastq fastq (reads) 413.7 MB
ENCFF527BMM.bed bed (peaks) 192.0 KB
ENCFF528TDT.bigBed bigBed (peaks) 2.9 MB
ENCFF529IPP.bed bed (peaks) 554.5 KB
ENCFF529RBH.bed bed (peaks) 1.4 MB
ENCFF532QNF.bam bam (alignments) 521.0 MB
ENCFF543MDB.bigBed bigBed (peaks) 2.9 MB
ENCFF597MMG.bed bed (peaks) 193.8 KB
ENCFF671GDQ.bed bed (peaks) 330.0 KB
ENCFF688FME.fastq fastq (reads) 615.5 MB
ENCFF715SCF.bed bed (peaks) 1.4 MB
ENCFF723XZC.bigWig bigWig (plus strand signal of unique reads) 24.5 MB
ENCFF739LLZ.bam bam (alignments) 260.1 MB
ENCFF837JRV.bed bed (peaks) 1.4 MB
ENCFF847RVA.bigBed bigBed (peaks) 1.2 MB
ENCFF852BMJ.bigBed bigBed (peaks) 1.9 MB
ENCFF865XWQ.bigBed bigBed (peaks) 2.7 MB
ENCFF904JLR.bed bed (peaks) 894.4 KB
ENCFF923WYZ.bigWig bigWig (minus strand signal of unique reads) 24.5 MB
ENCFF969UFE.bigWig bigWig (minus strand signal of unique reads) 14.2 MB
ENCFF992HAL.bigWig bigWig (plus strand signal of unique reads) 25.3 MB
ENCSR061EVO ENCSR via encode_api

eCLIP experiment on HepG2 against SND1

Homo sapiens
36 data files
FileTypeSize
ENCFF054ZXE.bed bed (peaks) 1.0 MB
ENCFF087LWQ.bigBed bigBed (peaks) 2.7 MB
ENCFF101EKG.bed bed (peaks) 165.2 KB
ENCFF101SPF.bigWig bigWig (minus strand signal of unique reads) 12.0 MB
ENCFF119OMH.bed bed (peaks) 740.8 KB
ENCFF169YJW.fastq fastq (reads) 378.0 MB
ENCFF174TXM.bam bam (alignments) 218.6 MB
ENCFF202GTL.bigWig bigWig (minus strand signal of unique reads) 7.6 MB
ENCFF202UMC.bigWig bigWig (plus strand signal of unique reads) 7.6 MB
ENCFF218RIX.bed bed (peaks) 752.2 KB
ENCFF230VML.bed bed (peaks) 298.4 KB
ENCFF296HGS.bam bam (alignments) 259.6 MB
ENCFF300LGS.bigBed bigBed (peaks) 2.6 MB
ENCFF303YBI.fastq fastq (reads) 364.1 MB
ENCFF321FYJ.bigBed bigBed (peaks) 1.5 MB
ENCFF321IEI.bigWig bigWig (plus strand signal of unique reads) 12.1 MB
ENCFF335KAS.fastq fastq (reads) 409.9 MB
ENCFF379MHZ.bigWig bigWig (minus strand signal of unique reads) 7.6 MB
ENCFF413DAP.bigBed bigBed (peaks) 1.8 MB
ENCFF438PZK.bed bed (peaks) 279.4 KB
ENCFF461RPA.bigBed bigBed (peaks) 1.8 MB
ENCFF471JAQ.bed bed (peaks) 1.1 MB
ENCFF510VYE.bigBed bigBed (peaks) 1.5 MB
ENCFF541WQN.bigBed bigBed (peaks) 709.2 KB
ENCFF587JIF.bigBed bigBed (peaks) 2.1 MB
ENCFF593VHQ.bigWig bigWig (plus strand signal of unique reads) 12.2 MB
ENCFF596YNB.bigBed bigBed (peaks) 2.1 MB
ENCFF609LWQ.bed bed (peaks) 167.8 KB
ENCFF655NIG.bam bam (alignments) 220.2 MB
ENCFF736FCQ.bigWig bigWig (plus strand signal of unique reads) 7.6 MB
ENCFF749TYO.bed bed (peaks) 904.5 KB
ENCFF761CYV.bed bed (peaks) 917.0 KB
ENCFF827JFL.bam bam (alignments) 259.5 MB
ENCFF886NVW.fastq fastq (reads) 347.4 MB
ENCFF902QMS.bigWig bigWig (minus strand signal of unique reads) 11.9 MB
ENCFF958RYM.bigBed bigBed (peaks) 676.0 KB
ENCSR744GEU ENCSR via encode_api

eCLIP experiment on HepG2 against IGF2BP1

Homo sapiens
36 data files
FileTypeSize
ENCFF026VOV.bigWig bigWig (minus strand signal of unique reads) 12.0 MB
ENCFF047WLR.bigBed bigBed (peaks) 2.9 MB
ENCFF059OSQ.bam bam (alignments) 250.5 MB
ENCFF062USV.bigBed bigBed (peaks) 767.4 KB
ENCFF068FVA.bigBed bigBed (peaks) 2.4 MB
ENCFF079OER.bigWig bigWig (plus strand signal of unique reads) 15.0 MB
ENCFF081XSP.bigWig bigWig (minus strand signal of unique reads) 14.5 MB
ENCFF145YYK.bed bed (peaks) 1.5 MB
ENCFF191MYZ.bigBed bigBed (peaks) 964.5 KB
ENCFF252IAP.bed bed (peaks) 790.7 KB
ENCFF301YGO.bed bed (peaks) 315.6 KB
ENCFF343XNS.bigBed bigBed (peaks) 2.0 MB
ENCFF358CZV.bigBed bigBed (peaks) 2.4 MB
ENCFF362JFX.fastq fastq (reads) 286.6 MB
ENCFF370PYL.bigWig bigWig (plus strand signal of unique reads) 12.3 MB
ENCFF398TNM.bigWig bigWig (plus strand signal of unique reads) 14.9 MB
ENCFF408OWO.bigBed bigBed (peaks) 3.0 MB
ENCFF426PJF.bigWig bigWig (plus strand signal of unique reads) 12.3 MB
ENCFF427IMN.bam bam (alignments) 248.1 MB
ENCFF437VOG.fastq fastq (reads) 198.6 MB
ENCFF438FSK.bam bam (alignments) 305.9 MB
ENCFF442USD.bed bed (peaks) 100.7 KB
ENCFF486BXN.bed bed (peaks) 1.5 MB
ENCFF489RIF.bigBed bigBed (peaks) 3.0 MB
ENCFF495QKH.bigBed bigBed (peaks) 3.8 MB
ENCFF517ECT.bed bed (peaks) 100.3 KB
ENCFF529DSE.bed bed (peaks) 428.6 KB
ENCFF539YWE.fastq fastq (reads) 208.8 MB
ENCFF556EAA.bed bed (peaks) 1014.8 KB
ENCFF705SDK.bed bed (peaks) 1.2 MB
ENCFF725BUB.bigWig bigWig (minus strand signal of unique reads) 14.5 MB
ENCFF777OWL.bam bam (alignments) 304.3 MB
ENCFF806HPD.bigBed bigBed (peaks) 1.6 MB
ENCFF906EOC.bigWig bigWig (minus strand signal of unique reads) 12.0 MB
ENCFF943QCL.fastq fastq (reads) 270.8 MB
ENCFF976DBP.bed bed (peaks) 1.2 MB
ENCSR993OLA ENCSR via encode_api

eCLIP experiment on HepG2 against IGF2BP3

Homo sapiens
36 data files
FileTypeSize
ENCFF015NHN.bam bam (alignments) 286.4 MB
ENCFF049ZWL.bigBed bigBed (peaks) 2.6 MB
ENCFF076GHL.bed bed (peaks) 1.7 MB
ENCFF119VBJ.bigWig bigWig (minus strand signal of unique reads) 14.5 MB
ENCFF152MMM.bigWig bigWig (plus strand signal of unique reads) 15.0 MB
ENCFF163VGP.bam bam (alignments) 410.7 MB
ENCFF175PMW.bed bed (peaks) 1.7 MB
ENCFF181QYC.bigBed bigBed (peaks) 914.0 KB
ENCFF225YAS.bigWig bigWig (minus strand signal of unique reads) 18.9 MB
ENCFF270FPU.bam bam (alignments) 409.5 MB
ENCFF311TOZ.bed bed (peaks) 53.0 KB
ENCFF333RHN.fastq fastq (reads) 390.0 MB
ENCFF351DRD.bigBed bigBed (peaks) 2.7 MB
ENCFF358BAW.bigWig bigWig (minus strand signal of unique reads) 18.9 MB
ENCFF386MJS.bigWig bigWig (minus strand signal of unique reads) 14.5 MB
ENCFF494JDZ.bed bed (peaks) 869.7 KB
ENCFF518ZYS.fastq fastq (reads) 370.4 MB
ENCFF533DYO.bigBed bigBed (peaks) 1.8 MB
ENCFF603WCG.bigBed bigBed (peaks) 4.2 MB
ENCFF631PRH.bigBed bigBed (peaks) 3.3 MB
ENCFF655ZEC.bigWig bigWig (plus strand signal of unique reads) 19.4 MB
ENCFF656OKM.bigWig bigWig (plus strand signal of unique reads) 19.5 MB
ENCFF707KYW.bigBed bigBed (peaks) 2.1 MB
ENCFF768LZF.fastq fastq (reads) 316.6 MB
ENCFF858ZLX.bed bed (peaks) 1.3 MB
ENCFF859PTK.bed bed (peaks) 390.8 KB
ENCFF860PRT.fastq fastq (reads) 334.5 MB
ENCFF886SDQ.bed bed (peaks) 53.6 KB
ENCFF889AZG.bigWig bigWig (plus strand signal of unique reads) 15.0 MB
ENCFF905NTJ.bigBed bigBed (peaks) 786.7 KB
ENCFF932BHQ.bigBed bigBed (peaks) 3.3 MB
ENCFF938GUT.bed bed (peaks) 1.0 MB
ENCFF942UFG.bed bed (peaks) 319.6 KB
ENCFF957CDL.bam bam (alignments) 287.5 MB
ENCFF961EYQ.bigBed bigBed (peaks) 3.1 MB
ENCFF998WZW.bed bed (peaks) 1.3 MB
ENCSR532VUB ENCSR via encode_api

eCLIP experiment on K562 against CPSF6

Homo sapiens
36 data files
FileTypeSize
ENCFF016HQW.bigWig bigWig (minus strand signal of unique reads) 10.9 MB
ENCFF069VDZ.bigBed bigBed (peaks) 2.0 MB
ENCFF087RUW.bigBed bigBed (peaks) 1.6 MB
ENCFF094MKS.bigWig bigWig (plus strand signal of unique reads) 13.1 MB
ENCFF185XTD.bam bam (alignments) 216.5 MB
ENCFF211WCW.bigBed bigBed (peaks) 1003.1 KB
ENCFF212RTC.bed bed (peaks) 184.3 KB
ENCFF219UMT.bigBed bigBed (peaks) 1.8 MB
ENCFF228KKX.bed bed (peaks) 184.1 KB
ENCFF255BMV.bigWig bigWig (plus strand signal of unique reads) 13.4 MB
ENCFF264WFT.bed bed (peaks) 17.3 KB
ENCFF271BGN.bigBed bigBed (peaks) 458.4 KB
ENCFF278OBX.bigWig bigWig (minus strand signal of unique reads) 11.0 MB
ENCFF284QIO.bed bed (peaks) 1.1 MB
ENCFF394FNH.fastq fastq (reads) 318.1 MB
ENCFF418OUX.bigBed bigBed (peaks) 1.8 MB
ENCFF420PXR.fastq fastq (reads) 319.6 MB
ENCFF437HLQ.bigWig bigWig (minus strand signal of unique reads) 12.7 MB
ENCFF443OUZ.bigWig bigWig (minus strand signal of unique reads) 12.6 MB
ENCFF454PKM.bed bed (peaks) 936.4 KB
ENCFF468JIB.bigBed bigBed (peaks) 1.6 MB
ENCFF503NTY.bigWig bigWig (plus strand signal of unique reads) 11.3 MB
ENCFF515QAG.bed bed (peaks) 934.7 KB
ENCFF550ABZ.bam bam (alignments) 175.8 MB
ENCFF550ZSZ.bam bam (alignments) 173.3 MB
ENCFF584TAI.bigBed bigBed (peaks) 2.0 MB
ENCFF595MJW.bigBed bigBed (peaks) 1.0 MB
ENCFF627IZE.bigBed bigBed (peaks) 449.3 KB
ENCFF635NZZ.bed bed (peaks) 17.9 KB
ENCFF751GZQ.bam bam (alignments) 213.8 MB
ENCFF776TRJ.fastq fastq (reads) 293.3 MB
ENCFF802BJP.bed bed (peaks) 1.1 MB
ENCFF804XIP.bigWig bigWig (plus strand signal of unique reads) 11.6 MB
ENCFF916SVG.bed bed (peaks) 515.9 KB
ENCFF974NXR.bed bed (peaks) 540.6 KB
ENCFF975ABT.fastq fastq (reads) 295.8 MB
ENCSR486YGP ENCSR via encode_api

eCLIP experiment on HepG2 against FUBP3

Homo sapiens
34 data files
FileTypeSize
ENCFF015XGS.bigBed bigBed (peaks) 909.5 KB
ENCFF025FNK.bigBed bigBed (peaks) 1.5 MB
ENCFF038NWA.bigWig bigWig (minus strand signal of unique reads) 12.3 MB
ENCFF103YQS.bed bed (peaks) 902.7 KB
ENCFF121LXO.bigWig bigWig (minus strand signal of unique reads) 6.4 MB
ENCFF126AZS.fastq fastq (reads) 92.7 MB
ENCFF149SFF.bam bam (alignments) 232.5 MB
ENCFF157GGY.bigBed bigBed (peaks) 1.5 MB
ENCFF175YCA.bigBed bigBed (peaks) 619.3 KB
ENCFF231PRV.fastq fastq (reads) 97.4 MB
ENCFF253ITZ.bigBed bigBed (peaks) 911.6 KB
ENCFF410ITK.bed bed (peaks) 912.2 KB
ENCFF412WLP.bigWig bigWig (plus strand signal of unique reads) 6.5 MB
ENCFF442NVV.fastq fastq (reads) 154.4 MB
ENCFF466UMQ.bed bed (peaks) 60.9 KB
ENCFF533SOU.bed bed (peaks) 342.3 KB
ENCFF565TFN.bam bam (alignments) 138.7 MB
ENCFF598NYT.bed bed (peaks) 61.4 KB
ENCFF695KJV.bigWig bigWig (minus strand signal of unique reads) 12.6 MB
ENCFF709YPU.bam bam (alignments) 238.3 MB
ENCFF714TFP.bed bed (peaks) 482.3 KB
ENCFF724AGV.bed bed (peaks) 107.5 KB
ENCFF739YDO.bed bed (peaks) 481.2 KB
ENCFF756PDY.bed bed (peaks) 149.4 KB
ENCFF766NUA.bigBed bigBed (peaks) 353.8 KB
ENCFF786JBY.bigWig bigWig (plus strand signal of unique reads) 12.7 MB
ENCFF836HIK.bam bam (alignments) 136.3 MB
ENCFF853KTH.bigBed bigBed (peaks) 817.4 KB
ENCFF892YYJ.bigBed bigBed (peaks) 438.5 KB
ENCFF938RNB.fastq fastq (reads) 148.7 MB
ENCFF951MII.bigWig bigWig (plus strand signal of unique reads) 12.9 MB
ENCFF992GHQ.bigWig bigWig (minus strand signal of unique reads) 6.4 MB
ENCFF994YUD.bed bed (peaks) 238.5 KB
ENCFF996VRR.bigWig bigWig (plus strand signal of unique reads) 6.5 MB
ENCSR482ZSE ENCSR via encode_api

eCLIP control experiment on K562 against U2AF1

Homo sapiens
8 data files
FileTypeSize
ENCFF097FJQ.bam bam (alignments) 169.6 MB
ENCFF190YCK.bigWig bigWig (minus strand signal of unique reads) 9.9 MB
ENCFF390CHP.bigWig bigWig (plus strand signal of unique reads) 10.4 MB
ENCFF560FPW.bigWig bigWig (plus strand signal of unique reads) 10.5 MB
ENCFF690PIW.fastq fastq (reads) 448.7 MB
ENCFF704DIO.fastq fastq (reads) 459.2 MB
ENCFF902JCQ.bigWig bigWig (minus strand signal of unique reads) 10.0 MB
ENCFF948OYU.bam bam (alignments) 169.8 MB
ENCSR354KAS ENCSR via encode_api

eCLIP control experiment on HepG2 against HNRNPK

Homo sapiens
8 data files
FileTypeSize
ENCFF019JFZ.bam bam (alignments) 264.0 MB
ENCFF060FDD.fastq fastq (reads) 301.0 MB
ENCFF157EHU.bigWig bigWig (plus strand signal of unique reads) 13.1 MB
ENCFF377LKH.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCFF538YHY.bam bam (alignments) 262.3 MB
ENCFF555OUH.fastq fastq (reads) 291.6 MB
ENCFF748LOT.bigWig bigWig (minus strand signal of unique reads) 12.9 MB
ENCFF993RTG.bigWig bigWig (minus strand signal of unique reads) 12.8 MB
ENCSR432XUP ENCSR via encode_api

eCLIP experiment on K562 against SRSF1

Homo sapiens
36 data files
FileTypeSize
ENCFF036OFK.bigBed bigBed (peaks) 2.8 MB
ENCFF137IAG.bigWig bigWig (plus strand signal of unique reads) 15.6 MB
ENCFF140XJG.bigBed bigBed (peaks) 1.7 MB
ENCFF205JTY.bed bed (peaks) 1.9 MB
ENCFF210EIS.bigWig bigWig (plus strand signal of unique reads) 16.0 MB
ENCFF265TZW.bigBed bigBed (peaks) 3.8 MB
ENCFF282DBV.bigBed bigBed (peaks) 2.2 MB
ENCFF287KWV.bed bed (peaks) 1.9 MB
ENCFF320HAO.bigBed bigBed (peaks) 2.2 MB
ENCFF350JLJ.bigBed bigBed (peaks) 587.3 KB
ENCFF357WUJ.bed bed (peaks) 801.5 KB
ENCFF373NZF.bed bed (peaks) 1.3 MB
ENCFF374XWQ.bam bam (alignments) 272.4 MB
ENCFF526BKN.bigWig bigWig (minus strand signal of unique reads) 21.4 MB
ENCFF548JES.bed bed (peaks) 272.4 KB
ENCFF553SIV.bigWig bigWig (plus strand signal of unique reads) 22.4 MB
ENCFF559MWF.fastq fastq (reads) 464.4 MB
ENCFF577STV.bigBed bigBed (peaks) 3.3 MB
ENCFF609IXO.bed bed (peaks) 1.3 MB
ENCFF618XPJ.bigWig bigWig (minus strand signal of unique reads) 21.6 MB
ENCFF632XBD.fastq fastq (reads) 264.7 MB
ENCFF639ESC.bigWig bigWig (minus strand signal of unique reads) 15.4 MB
ENCFF642LZT.bigWig bigWig (plus strand signal of unique reads) 22.2 MB
ENCFF647VSE.bed bed (peaks) 258.4 KB
ENCFF653HQA.bigBed bigBed (peaks) 1.3 MB
ENCFF664EPV.bam bam (alignments) 426.2 MB
ENCFF696TJG.bam bam (alignments) 268.1 MB
ENCFF708IPL.bigBed bigBed (peaks) 3.8 MB
ENCFF776RIU.fastq fastq (reads) 244.9 MB
ENCFF788UFQ.bed bed (peaks) 46.0 KB
ENCFF833PXB.bam bam (alignments) 433.1 MB
ENCFF886XUO.bed bed (peaks) 44.8 KB
ENCFF944CRL.bigBed bigBed (peaks) 600.0 KB
ENCFF952LUQ.bed bed (peaks) 755.1 KB
ENCFF982ZPQ.fastq fastq (reads) 424.3 MB
ENCFF985WYO.bigWig bigWig (minus strand signal of unique reads) 15.1 MB
ENCSR965DLL ENCSR via encode_api

eCLIP experiment on HepG2 against SFPQ

Homo sapiens
36 data files
FileTypeSize
ENCFF056KWN.bam bam (alignments) 276.2 MB
ENCFF110BEO.bigBed bigBed (peaks) 663.0 KB
ENCFF128SFP.bed bed (peaks) 73.6 KB
ENCFF130CRL.bigBed bigBed (peaks) 2.2 MB
ENCFF135ZMX.bigBed bigBed (peaks) 313.1 KB
ENCFF139NXB.bed bed (peaks) 50.4 KB
ENCFF199CPK.bigWig bigWig (minus strand signal of unique reads) 17.2 MB
ENCFF210JXR.bigWig bigWig (minus strand signal of unique reads) 29.1 MB
ENCFF214QPY.bigWig bigWig (plus strand signal of unique reads) 18.0 MB
ENCFF221WOF.bed bed (peaks) 2.7 MB
ENCFF285AWF.bigBed bigBed (peaks) 2.3 MB
ENCFF295QPY.bigWig bigWig (minus strand signal of unique reads) 29.2 MB
ENCFF315AQY.fastq fastq (reads) 539.5 MB
ENCFF329REE.bed bed (peaks) 212.8 KB
ENCFF354MQU.bigBed bigBed (peaks) 220.9 KB
ENCFF417EZT.bed bed (peaks) 1.4 MB
ENCFF464KFB.bigWig bigWig (minus strand signal of unique reads) 17.1 MB
ENCFF565CQA.bigWig bigWig (plus strand signal of unique reads) 18.0 MB
ENCFF617MDS.fastq fastq (reads) 318.3 MB
ENCFF634OXH.bigBed bigBed (peaks) 985.7 KB
ENCFF676PEK.bed bed (peaks) 303.6 KB
ENCFF681EDG.bigWig bigWig (plus strand signal of unique reads) 30.3 MB
ENCFF784TOV.bigBed bigBed (peaks) 5.0 MB
ENCFF788NZP.bigBed bigBed (peaks) 5.0 MB
ENCFF801OMP.bigBed bigBed (peaks) 440.0 KB
ENCFF805LKH.bed bed (peaks) 49.9 KB
ENCFF822GVL.fastq fastq (reads) 293.9 MB
ENCFF823MPG.bigWig bigWig (plus strand signal of unique reads) 30.2 MB
ENCFF849HII.bam bam (alignments) 277.9 MB
ENCFF857OFG.bam bam (alignments) 556.8 MB
ENCFF862AWU.bam bam (alignments) 561.6 MB
ENCFF867TQG.bigBed bigBed (peaks) 1.2 MB
ENCFF919FIY.bed bed (peaks) 1.4 MB
ENCFF937XDO.bed bed (peaks) 105.5 KB
ENCFF960OTE.bed bed (peaks) 2.7 MB
ENCFF981KZD.fastq fastq (reads) 510.8 MB
ENCSR128VXC ENCSR via encode_api

eCLIP experiment on K562 against SND1

Homo sapiens
36 data files
FileTypeSize
ENCFF029JEG.bigWig bigWig (plus strand signal of unique reads) 23.8 MB
ENCFF061NQX.bed bed (peaks) 250.0 KB
ENCFF114EYT.bigBed bigBed (peaks) 4.5 MB
ENCFF128MAP.fastq fastq (reads) 685.4 MB
ENCFF157LOT.fastq fastq (reads) 585.1 MB
ENCFF170LCY.bigBed bigBed (peaks) 4.1 MB
ENCFF211QBY.bigWig bigWig (plus strand signal of unique reads) 22.3 MB
ENCFF211TRO.bed bed (peaks) 96.5 KB
ENCFF237HET.fastq fastq (reads) 638.8 MB
ENCFF322FYT.bigBed bigBed (peaks) 1.7 MB
ENCFF331VCF.bed bed (peaks) 96.7 KB
ENCFF341KSL.bed bed (peaks) 2.3 MB
ENCFF351QXF.bam bam (alignments) 472.4 MB
ENCFF357NHT.bed bed (peaks) 731.7 KB
ENCFF360RDW.bed bed (peaks) 885.6 KB
ENCFF367EEH.bam bam (alignments) 480.7 MB
ENCFF375WFM.bigBed bigBed (peaks) 4.1 MB
ENCFF430VKJ.bigBed bigBed (peaks) 4.5 MB
ENCFF479VZE.bed bed (peaks) 2.3 MB
ENCFF567VFQ.bigWig bigWig (plus strand signal of unique reads) 24.1 MB
ENCFF577WGX.bigWig bigWig (minus strand signal of unique reads) 23.3 MB
ENCFF612RZN.bam bam (alignments) 442.3 MB
ENCFF615YQJ.bigWig bigWig (plus strand signal of unique reads) 22.1 MB
ENCFF664JCH.bigWig bigWig (minus strand signal of unique reads) 21.4 MB
ENCFF675MWW.bigBed bigBed (peaks) 1.4 MB
ENCFF677MQI.bed bed (peaks) 2.1 MB
ENCFF729WJN.bigBed bigBed (peaks) 726.4 KB
ENCFF739SGD.bigBed bigBed (peaks) 3.0 MB
ENCFF867TFQ.bam bam (alignments) 435.8 MB
ENCFF869HBJ.bigWig bigWig (minus strand signal of unique reads) 23.1 MB
ENCFF871WGQ.fastq fastq (reads) 543.7 MB
ENCFF873PCX.bigBed bigBed (peaks) 2.5 MB
ENCFF891DWW.bigBed bigBed (peaks) 605.3 KB
ENCFF934MCU.bigWig bigWig (minus strand signal of unique reads) 21.6 MB
ENCFF971LCF.bed bed (peaks) 2.1 MB
ENCFF982QUT.bed bed (peaks) 317.8 KB
ENCSR267OLV ENCSR via encode_api

eCLIP experiment on K562 against SF3B4

Homo sapiens
36 data files
FileTypeSize
ENCFF009QOP.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCFF013ZHF.bed bed (peaks) 1.3 MB
ENCFF036ZJT.fastq fastq (reads) 732.7 MB
ENCFF063MAF.fastq fastq (reads) 739.4 MB
ENCFF095KWC.bam bam (alignments) 193.1 MB
ENCFF115VOI.bigBed bigBed (peaks) 2.6 MB
ENCFF173BOO.bam bam (alignments) 236.2 MB
ENCFF177LYJ.bigWig bigWig (minus strand signal of unique reads) 12.6 MB
ENCFF187VMX.bed bed (peaks) 229.3 KB
ENCFF220ERG.bigBed bigBed (peaks) 2.6 MB
ENCFF238HVL.bigBed bigBed (peaks) 663.7 KB
ENCFF252JLE.bigWig bigWig (plus strand signal of unique reads) 11.4 MB
ENCFF254LKZ.bed bed (peaks) 305.1 KB
ENCFF258MIJ.bigBed bigBed (peaks) 2.9 MB
ENCFF363ZXR.fastq fastq (reads) 614.8 MB
ENCFF378VIS.bigWig bigWig (minus strand signal of unique reads) 10.8 MB
ENCFF379LAL.bam bam (alignments) 198.2 MB
ENCFF453HOH.bigBed bigBed (peaks) 1.4 MB
ENCFF477PBU.bam bam (alignments) 242.7 MB
ENCFF480NTZ.bigWig bigWig (minus strand signal of unique reads) 12.8 MB
ENCFF498SRM.bed bed (peaks) 1.3 MB
ENCFF528NAX.bigBed bigBed (peaks) 2.8 MB
ENCFF649GEE.bed bed (peaks) 222.6 KB
ENCFF658CBT.bed bed (peaks) 1.3 MB
ENCFF686EKJ.bigBed bigBed (peaks) 2.6 MB
ENCFF707MUI.bigBed bigBed (peaks) 2.6 MB
ENCFF714TSS.bigBed bigBed (peaks) 1.4 MB
ENCFF716HYU.bigWig bigWig (plus strand signal of unique reads) 11.2 MB
ENCFF719LDN.bigBed bigBed (peaks) 665.7 KB
ENCFF771EQA.bed bed (peaks) 793.9 KB
ENCFF788GEX.bigWig bigWig (plus strand signal of unique reads) 13.3 MB
ENCFF788PZS.bed bed (peaks) 1.3 MB
ENCFF809CSI.bigWig bigWig (minus strand signal of unique reads) 11.0 MB
ENCFF873DZN.bed bed (peaks) 828.4 KB
ENCFF900YPE.fastq fastq (reads) 622.6 MB
ENCFF930OND.bed bed (peaks) 306.6 KB
ENCSR754NDA ENCSR via encode_api

eCLIP experiment on HepG2 against RBM15

Homo sapiens
36 data files
FileTypeSize
ENCFF017HYK.bed bed (peaks) 2.4 MB
ENCFF047BAY.bed bed (peaks) 412.3 KB
ENCFF053WWX.bigBed bigBed (peaks) 3.9 MB
ENCFF054VLU.bed bed (peaks) 32.5 KB
ENCFF059JYI.bigWig bigWig (minus strand signal of unique reads) 22.2 MB
ENCFF060IFR.fastq fastq (reads) 1.0 GB
ENCFF164MLB.bigBed bigBed (peaks) 1.9 MB
ENCFF165VFF.bed bed (peaks) 2.3 MB
ENCFF172MCY.fastq fastq (reads) 1.1 GB
ENCFF200HBN.bigWig bigWig (minus strand signal of unique reads) 5.8 MB
ENCFF209PMC.bed bed (peaks) 1.1 MB
ENCFF261SEG.bam bam (alignments) 114.2 MB
ENCFF311HXQ.bigBed bigBed (peaks) 1.5 MB
ENCFF326UBV.bigBed bigBed (peaks) 595.8 KB
ENCFF415HAC.bam bam (alignments) 459.3 MB
ENCFF496QBW.bigBed bigBed (peaks) 992.3 KB
ENCFF499LMU.bam bam (alignments) 120.2 MB
ENCFF556ONJ.bigBed bigBed (peaks) 1.8 MB
ENCFF562QVD.bam bam (alignments) 437.6 MB
ENCFF568VVF.bigWig bigWig (plus strand signal of unique reads) 23.0 MB
ENCFF626BOU.bigBed bigBed (peaks) 4.7 MB
ENCFF628YNI.bed bed (peaks) 801.2 KB
ENCFF630BAM.bigWig bigWig (plus strand signal of unique reads) 23.9 MB
ENCFF741TBO.bigBed bigBed (peaks) 2.4 MB
ENCFF772XRY.bed bed (peaks) 318.4 KB
ENCFF782GYB.bed bed (peaks) 1.1 MB
ENCFF853TEI.bigBed bigBed (peaks) 4.6 MB
ENCFF869TEZ.fastq fastq (reads) 690.8 MB
ENCFF873KII.bigBed bigBed (peaks) 3.2 MB
ENCFF882OPA.bigWig bigWig (plus strand signal of unique reads) 5.8 MB
ENCFF923FKJ.fastq fastq (reads) 634.3 MB
ENCFF946NNP.bigWig bigWig (minus strand signal of unique reads) 23.0 MB
ENCFF957LNV.bigWig bigWig (plus strand signal of unique reads) 6.0 MB
ENCFF963GEG.bigWig bigWig (minus strand signal of unique reads) 5.6 MB
ENCFF971BBY.bed bed (peaks) 1.1 MB
ENCFF982RHC.bed bed (peaks) 32.9 KB
ENCSR307YIW ENCSR via encode_api

eCLIP experiment on K562 against EIF4G2

Homo sapiens
36 data files
FileTypeSize
ENCFF072EQT.bed bed (peaks) 556.8 KB
ENCFF118NIZ.bam bam (alignments) 137.5 MB
ENCFF141IZT.bigWig bigWig (plus strand signal of unique reads) 10.8 MB
ENCFF207BXK.bed bed (peaks) 98.1 KB
ENCFF285CJS.bigWig bigWig (minus strand signal of unique reads) 10.1 MB
ENCFF301BRQ.bigBed bigBed (peaks) 1.9 MB
ENCFF305TMB.bigWig bigWig (plus strand signal of unique reads) 9.0 MB
ENCFF346ZGM.bigBed bigBed (peaks) 1.8 MB
ENCFF378UZW.bigBed bigBed (peaks) 500.9 KB
ENCFF404DLL.bigBed bigBed (peaks) 483.9 KB
ENCFF414TML.bigWig bigWig (minus strand signal of unique reads) 8.5 MB
ENCFF447XAU.bigWig bigWig (minus strand signal of unique reads) 8.5 MB
ENCFF462XFB.bed bed (peaks) 830.9 KB
ENCFF489PBJ.bigBed bigBed (peaks) 1.8 MB
ENCFF512MNG.bed bed (peaks) 885.8 KB
ENCFF537IFC.fastq fastq (reads) 327.2 MB
ENCFF577PGM.bigWig bigWig (minus strand signal of unique reads) 10.1 MB
ENCFF596HRG.bigBed bigBed (peaks) 986.2 KB
ENCFF614FCA.bigWig bigWig (plus strand signal of unique reads) 9.0 MB
ENCFF626NQT.bam bam (alignments) 168.8 MB
ENCFF635HSX.bed bed (peaks) 508.5 KB
ENCFF648LCX.bed bed (peaks) 97.4 KB
ENCFF683WKJ.fastq fastq (reads) 349.7 MB
ENCFF699HKX.fastq fastq (reads) 215.1 MB
ENCFF723JSM.fastq fastq (reads) 229.1 MB
ENCFF767ZTI.bigBed bigBed (peaks) 1.7 MB
ENCFF819PCC.bed bed (peaks) 213.6 KB
ENCFF858JIO.bigBed bigBed (peaks) 1.7 MB
ENCFF873WNB.bam bam (alignments) 171.1 MB
ENCFF904UGT.bigBed bigBed (peaks) 1.2 MB
ENCFF920LSC.bed bed (peaks) 886.2 KB
ENCFF932YYV.bigWig bigWig (plus strand signal of unique reads) 10.8 MB
ENCFF957YHP.bigBed bigBed (peaks) 1.8 MB
ENCFF977COP.bed bed (peaks) 831.0 KB
ENCFF978RGR.bed bed (peaks) 196.6 KB
ENCFF996PFW.bam bam (alignments) 135.3 MB
ENCSR373ODC ENCSR via encode_api

eCLIP experiment on HepG2 against SMNDC1

Homo sapiens
36 data files
FileTypeSize
ENCFF110YDG.bam bam (alignments) 147.7 MB
ENCFF125BMO.bam bam (alignments) 167.4 MB
ENCFF157STJ.bigBed bigBed (peaks) 607.1 KB
ENCFF161SFC.bigWig bigWig (plus strand signal of unique reads) 7.9 MB
ENCFF166OFV.bigBed bigBed (peaks) 1.3 MB
ENCFF169YTC.bigBed bigBed (peaks) 283.1 KB
ENCFF189VWQ.bigBed bigBed (peaks) 968.0 KB
ENCFF207JIK.bed bed (peaks) 410.0 KB
ENCFF230AER.bed bed (peaks) 504.4 KB
ENCFF240MCZ.bed bed (peaks) 755.6 KB
ENCFF279REA.bed bed (peaks) 140.4 KB
ENCFF282DDB.bigWig bigWig (minus strand signal of unique reads) 7.3 MB
ENCFF288HXM.bigWig bigWig (minus strand signal of unique reads) 6.5 MB
ENCFF320TDT.bigWig bigWig (plus strand signal of unique reads) 7.7 MB
ENCFF347ARQ.fastq fastq (reads) 261.8 MB
ENCFF356SSO.bed bed (peaks) 499.7 KB
ENCFF403AXO.bigBed bigBed (peaks) 1.1 MB
ENCFF428AMR.bigWig bigWig (plus strand signal of unique reads) 6.6 MB
ENCFF468CQU.bam bam (alignments) 171.4 MB
ENCFF478LAF.bigWig bigWig (plus strand signal of unique reads) 6.7 MB
ENCFF497HWV.bigBed bigBed (peaks) 329.8 KB
ENCFF530KKM.bigBed bigBed (peaks) 867.5 KB
ENCFF588UIR.bed bed (peaks) 747.6 KB
ENCFF590MHG.bigWig bigWig (minus strand signal of unique reads) 6.4 MB
ENCFF605XKA.bed bed (peaks) 91.5 KB
ENCFF607ZGH.bed bed (peaks) 267.7 KB
ENCFF643XEW.fastq fastq (reads) 198.8 MB
ENCFF653FZA.bigBed bigBed (peaks) 1.7 MB
ENCFF693EMF.bed bed (peaks) 8.6 KB
ENCFF736RYV.bed bed (peaks) 7.8 KB
ENCFF785IEU.bigWig bigWig (minus strand signal of unique reads) 7.4 MB
ENCFF893TFI.bigBed bigBed (peaks) 1.3 MB
ENCFF911CAB.fastq fastq (reads) 266.0 MB
ENCFF963AVW.fastq fastq (reads) 203.8 MB
ENCFF966TSJ.bam bam (alignments) 151.2 MB
ENCFF967HTY.bigBed bigBed (peaks) 961.0 KB
ENCSR265ZIS ENCSR via encode_api

eCLIP experiment on HepG2 against GTF2F1

Homo sapiens
36 data files
FileTypeSize
ENCFF002HYO.bed bed (peaks) 91.7 KB
ENCFF092IJR.bed bed (peaks) 1.4 MB
ENCFF129JQP.bigWig bigWig (plus strand signal of unique reads) 19.9 MB
ENCFF157WNL.bam bam (alignments) 333.9 MB
ENCFF178PGX.bed bed (peaks) 188.7 KB
ENCFF240QYG.bed bed (peaks) 1.5 MB
ENCFF241SUC.bed bed (peaks) 92.9 KB
ENCFF252ZKZ.bed bed (peaks) 1.5 MB
ENCFF264ZRY.bigWig bigWig (plus strand signal of unique reads) 19.2 MB
ENCFF321BPE.fastq fastq (reads) 374.9 MB
ENCFF326CJU.bigWig bigWig (minus strand signal of unique reads) 19.2 MB
ENCFF334DBN.bigBed bigBed (peaks) 2.4 MB
ENCFF400HJB.bam bam (alignments) 338.6 MB
ENCFF410GEU.bed bed (peaks) 187.1 KB
ENCFF418SKL.bed bed (peaks) 535.4 KB
ENCFF498YIO.bam bam (alignments) 345.4 MB
ENCFF507ECO.bigBed bigBed (peaks) 473.7 KB
ENCFF560XDO.bigBed bigBed (peaks) 2.8 MB
ENCFF567SQB.bigBed bigBed (peaks) 456.6 KB
ENCFF587LRZ.bam bam (alignments) 355.3 MB
ENCFF613ASX.bigWig bigWig (minus strand signal of unique reads) 18.6 MB
ENCFF613QDB.fastq fastq (reads) 366.1 MB
ENCFF692APB.fastq fastq (reads) 362.0 MB
ENCFF694DGQ.bigWig bigWig (plus strand signal of unique reads) 18.6 MB
ENCFF745LHE.bigBed bigBed (peaks) 2.9 MB
ENCFF747FBU.fastq fastq (reads) 345.0 MB
ENCFF774GHB.bigWig bigWig (minus strand signal of unique reads) 18.8 MB
ENCFF776AWV.bigWig bigWig (plus strand signal of unique reads) 19.4 MB
ENCFF829PCH.bigBed bigBed (peaks) 1.2 MB
ENCFF830FZH.bed bed (peaks) 1.4 MB
ENCFF865ETW.bigBed bigBed (peaks) 1.9 MB
ENCFF882QSZ.bigWig bigWig (minus strand signal of unique reads) 17.9 MB
ENCFF899VWR.bigBed bigBed (peaks) 2.0 MB
ENCFF922ETP.bigBed bigBed (peaks) 1.0 MB
ENCFF950LOA.bed bed (peaks) 542.4 KB
ENCFF973THL.bigBed bigBed (peaks) 2.5 MB
ENCSR629MQN ENCSR via encode_api

eCLIP control experiment on HepG2 against SRSF7

Homo sapiens
8 data files
FileTypeSize
ENCFF043KVQ.fastq fastq (reads) 317.4 MB
ENCFF160TWL.bam bam (alignments) 180.5 MB
ENCFF586AZF.bam bam (alignments) 180.0 MB
ENCFF611KBN.fastq fastq (reads) 325.5 MB
ENCFF678FIY.bigWig bigWig (minus strand signal of unique reads) 6.4 MB
ENCFF733ZLW.bigWig bigWig (minus strand signal of unique reads) 6.3 MB
ENCFF826HSS.bigWig bigWig (plus strand signal of unique reads) 6.5 MB
ENCFF965POO.bigWig bigWig (plus strand signal of unique reads) 6.5 MB
ENCSR534YOI ENCSR via encode_api

eCLIP experiment on K562 against PRPF8

Homo sapiens
35 data files
FileTypeSize
ENCFF057BFH.bigBed bigBed (peaks) 4.2 MB
ENCFF093BES.bigWig bigWig (plus strand signal of unique reads) 19.4 MB
ENCFF160MVU.bigWig bigWig (plus strand signal of unique reads) 23.5 MB
ENCFF167VAS.bed bed (peaks) 1.9 MB
ENCFF250KIT.bigWig bigWig (plus strand signal of unique reads) 23.0 MB
ENCFF282CXV.bigBed bigBed (peaks) 1.7 MB
ENCFF314CHT.bigBed bigBed (peaks) 2.6 MB
ENCFF319LAK.bam bam (alignments) 420.7 MB
ENCFF341LOO.bed bed (peaks) 254.0 KB
ENCFF343JQN.fastq fastq (reads) 420.1 MB
ENCFF378HIP.fastq fastq (reads) 292.8 MB
ENCFF494DYW.bigWig bigWig (plus strand signal of unique reads) 19.6 MB
ENCFF548ACI.bigBed bigBed (peaks) 3.6 MB
ENCFF554UWY.bigBed bigBed (peaks) 3.5 MB
ENCFF558FAR.bam bam (alignments) 421.6 MB
ENCFF576DYQ.bed bed (peaks) 1.8 MB
ENCFF582YLB.bigWig bigWig (minus strand signal of unique reads) 22.8 MB
ENCFF587GNE.bed bed (peaks) 802.1 KB
ENCFF635OAZ.bed bed (peaks) 929.4 KB
ENCFF687LRO.bed bed (peaks) 2.2 MB
ENCFF689MJF.bam bam (alignments) 341.1 MB
ENCFF704TRB.bigBed bigBed (peaks) 568.9 KB
ENCFF727HJV.bigBed bigBed (peaks) 1.9 MB
ENCFF792GSE.fastq fastq (reads) 375.5 MB
ENCFF823AQM.bigBed bigBed (peaks) 777.9 KB
ENCFF837HED.bed bed (peaks) 302.6 KB
ENCFF850LZX.bigWig bigWig (minus strand signal of unique reads) 18.8 MB
ENCFF858UKE.bed bed (peaks) 227.3 KB
ENCFF937DLK.bigWig bigWig (minus strand signal of unique reads) 22.3 MB
ENCFF949RPR.bed bed (peaks) 220.5 KB
ENCFF975SKP.fastq fastq (reads) 335.8 MB
ENCFF984QHA.bigWig bigWig (minus strand signal of unique reads) 19.0 MB
ENCFF987VDX.bam bam (alignments) 344.6 MB
ENCFF991SQO.bigBed bigBed (peaks) 4.2 MB
ENCFF996MYF.bed bed (peaks) 2.3 MB
ENCSR527DXF ENCSR via encode_api

eCLIP experiment on HepG2 against EFTUD2

Homo sapiens
36 data files
FileTypeSize
ENCFF017IRY.bed bed (peaks) 177.4 KB
ENCFF021EVP.bigBed bigBed (peaks) 3.1 MB
ENCFF035LGQ.bigWig bigWig (minus strand signal of unique reads) 9.0 MB
ENCFF036SRS.bigWig bigWig (plus strand signal of unique reads) 9.5 MB
ENCFF053SAV.bigBed bigBed (peaks) 778.3 KB
ENCFF061QCD.bam bam (alignments) 149.6 MB
ENCFF078BZO.bigBed bigBed (peaks) 1.7 MB
ENCFF087QRH.bigBed bigBed (peaks) 2.9 MB
ENCFF115BKF.bigWig bigWig (plus strand signal of unique reads) 9.1 MB
ENCFF128MQR.bed bed (peaks) 2.2 MB
ENCFF201YNC.bam bam (alignments) 445.0 MB
ENCFF206TXR.bigWig bigWig (minus strand signal of unique reads) 20.2 MB
ENCFF292PAL.bigBed bigBed (peaks) 1.9 MB
ENCFF327OME.bigBed bigBed (peaks) 4.3 MB
ENCFF347GOC.bed bed (peaks) 294.9 KB
ENCFF372RTG.bigBed bigBed (peaks) 752.7 KB
ENCFF377HAO.bed bed (peaks) 923.9 KB
ENCFF381UFF.bam bam (alignments) 158.5 MB
ENCFF441XUV.fastq fastq (reads) 673.6 MB
ENCFF454UOS.fastq fastq (reads) 702.6 MB
ENCFF459NZV.bigBed bigBed (peaks) 3.6 MB
ENCFF483AFJ.bigWig bigWig (plus strand signal of unique reads) 21.4 MB
ENCFF490GBA.fastq fastq (reads) 652.0 MB
ENCFF499JDZ.bam bam (alignments) 433.4 MB
ENCFF511ZTQ.bed bed (peaks) 2.2 MB
ENCFF519LOW.bigWig bigWig (plus strand signal of unique reads) 21.8 MB
ENCFF657AOS.bigWig bigWig (minus strand signal of unique reads) 8.7 MB
ENCFF714YXE.bed bed (peaks) 1.5 MB
ENCFF727KTZ.fastq fastq (reads) 720.9 MB
ENCFF741ZOS.bigWig bigWig (minus strand signal of unique reads) 20.6 MB
ENCFF765TII.bed bed (peaks) 984.3 KB
ENCFF796RMF.bed bed (peaks) 169.6 KB
ENCFF840QBW.bed bed (peaks) 352.8 KB
ENCFF857JEW.bigBed bigBed (peaks) 4.2 MB
ENCFF955RUR.bed bed (peaks) 1.5 MB
ENCFF958ZJB.bigBed bigBed (peaks) 3.0 MB
ENCSR438GZQ ENCSR via encode_api

eCLIP experiment on K562 against KHSRP

Homo sapiens
35 data files
FileTypeSize
ENCFF014LLF.fastq fastq (reads) 654.4 MB
ENCFF031FMO.bed bed (peaks) 511.5 KB
ENCFF032LQU.bigBed bigBed (peaks) 8.1 MB
ENCFF034PXB.bigWig bigWig (plus strand signal of unique reads) 51.7 MB
ENCFF036ESC.bigBed bigBed (peaks) 1.9 MB
ENCFF060SFT.bigWig bigWig (minus strand signal of unique reads) 50.3 MB
ENCFF066PCT.bed bed (peaks) 352.1 KB
ENCFF087ZCZ.bed bed (peaks) 994.2 KB
ENCFF094QVM.bigWig bigWig (plus strand signal of unique reads) 52.5 MB
ENCFF118GAL.bed bed (peaks) 858.0 KB
ENCFF127WMZ.bed bed (peaks) 4.5 MB
ENCFF133EJA.bam bam (alignments) 1.1 GB
ENCFF146GUU.bigWig bigWig (minus strand signal of unique reads) 51.1 MB
ENCFF249OVY.bigBed bigBed (peaks) 7.9 MB
ENCFF329DFY.bigBed bigBed (peaks) 817.3 KB
ENCFF374XQF.bed bed (peaks) 4.7 MB
ENCFF393NCT.bigWig bigWig (minus strand signal of unique reads) 60.7 MB
ENCFF394THC.bam bam (alignments) 1.1 GB
ENCFF429OUS.bigBed bigBed (peaks) 724.0 KB
ENCFF498QZQ.bed bed (peaks) 4.5 MB
ENCFF512ZBC.bed bed (peaks) 301.1 KB
ENCFF531NDZ.bed bed (peaks) 4.7 MB
ENCFF538QCY.fastq fastq (reads) 676.9 MB
ENCFF634TPL.bigBed bigBed (peaks) 7.9 MB
ENCFF665BIZ.bam bam (alignments) 1.1 GB
ENCFF698TGL.bam bam (alignments) 1.0 GB
ENCFF708FTS.bigBed bigBed (peaks) 1.7 MB
ENCFF764CKI.bigWig bigWig (minus strand signal of unique reads) 61.4 MB
ENCFF768ZZP.bigBed bigBed (peaks) 8.2 MB
ENCFF860VTI.bigWig bigWig (plus strand signal of unique reads) 62.3 MB
ENCFF871BYW.bed bed (peaks) 501.9 KB
ENCFF900BFH.bigWig bigWig (plus strand signal of unique reads) 63.0 MB
ENCFF901KIG.fastq fastq (reads) 673.0 MB
ENCFF964QFZ.bigBed bigBed (peaks) 3.4 MB
ENCFF973MWU.fastq fastq (reads) 649.2 MB
ENCSR987NYS ENCSR via encode_api

eCLIP experiment on HepG2 against FAM120A

Homo sapiens
36 data files
FileTypeSize
ENCFF037CYW.bigBed bigBed (peaks) 4.1 MB
ENCFF037FOV.bigWig bigWig (minus strand signal of unique reads) 22.8 MB
ENCFF105IAX.bam bam (alignments) 460.9 MB
ENCFF208ZMI.bed bed (peaks) 188.2 KB
ENCFF211KDO.bigBed bigBed (peaks) 3.2 MB
ENCFF287ADK.bed bed (peaks) 1.9 MB
ENCFF319ICK.fastq fastq (reads) 427.7 MB
ENCFF354DCE.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCFF354PCR.bigWig bigWig (minus strand signal of unique reads) 22.8 MB
ENCFF384CEF.bigBed bigBed (peaks) 1.8 MB
ENCFF389LEX.bed bed (peaks) 1.9 MB
ENCFF438UEK.bed bed (peaks) 387.7 KB
ENCFF445AUC.bigWig bigWig (plus strand signal of unique reads) 23.9 MB
ENCFF511SXK.bed bed (peaks) 2.2 MB
ENCFF537VIU.bigWig bigWig (plus strand signal of unique reads) 20.5 MB
ENCFF545IVO.fastq fastq (reads) 316.9 MB
ENCFF559TMX.bed bed (peaks) 351.7 KB
ENCFF560JGB.bigBed bigBed (peaks) 3.5 MB
ENCFF599VUS.bam bam (alignments) 410.4 MB
ENCFF624JEI.bigWig bigWig (plus strand signal of unique reads) 20.4 MB
ENCFF636LMQ.bed bed (peaks) 942.1 KB
ENCFF649CQS.bigBed bigBed (peaks) 876.2 KB
ENCFF658NFU.bigBed bigBed (peaks) 4.1 MB
ENCFF670BUW.bigBed bigBed (peaks) 851.5 KB
ENCFF687SEY.fastq fastq (reads) 394.4 MB
ENCFF689MCG.bigBed bigBed (peaks) 3.3 MB
ENCFF704TQZ.bam bam (alignments) 408.4 MB
ENCFF741FRL.bed bed (peaks) 184.7 KB
ENCFF769ZSG.bed bed (peaks) 871.3 KB
ENCFF781UYD.bigWig bigWig (plus strand signal of unique reads) 23.8 MB
ENCFF786BCU.bed bed (peaks) 2.2 MB
ENCFF815UFF.fastq fastq (reads) 341.0 MB
ENCFF869VWO.bigBed bigBed (peaks) 1.8 MB
ENCFF887RRI.bigBed bigBed (peaks) 3.6 MB
ENCFF889YGM.bam bam (alignments) 458.9 MB
ENCFF947QMJ.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCSR887FHF ENCSR via encode_api

eCLIP experiment on K562 against FASTKD2

Homo sapiens
35 data files
FileTypeSize
ENCFF025IFV.bigBed bigBed (peaks) 1.1 MB
ENCFF042LBO.bigWig bigWig (plus strand signal of unique reads) 5.5 MB
ENCFF045FDJ.bigBed bigBed (peaks) 1.1 MB
ENCFF111XRA.fastq fastq (reads) 360.8 MB
ENCFF135ZJA.bigBed bigBed (peaks) 348.4 KB
ENCFF158VSM.bam bam (alignments) 242.8 MB
ENCFF178EKO.bigBed bigBed (peaks) 837.3 KB
ENCFF223JNG.bam bam (alignments) 148.0 MB
ENCFF225HCD.fastq fastq (reads) 494.6 MB
ENCFF232TCE.bigWig bigWig (minus strand signal of unique reads) 5.2 MB
ENCFF267DFP.bed bed (peaks) 604.9 KB
ENCFF267HNN.bigBed bigBed (peaks) 1.9 MB
ENCFF278SLD.bam bam (alignments) 238.4 MB
ENCFF280KMG.bigBed bigBed (peaks) 2.0 MB
ENCFF331RRQ.bed bed (peaks) 398.1 KB
ENCFF357ABQ.bed bed (peaks) 14.4 KB
ENCFF423SOR.bed bed (peaks) 14.5 KB
ENCFF505SKP.bigWig bigWig (plus strand signal of unique reads) 12.7 MB
ENCFF546CND.bed bed (peaks) 189.6 KB
ENCFF548WUW.bigBed bigBed (peaks) 2.0 MB
ENCFF567KSY.fastq fastq (reads) 501.4 MB
ENCFF649KGI.bigWig bigWig (plus strand signal of unique reads) 12.8 MB
ENCFF661SDU.bigWig bigWig (plus strand signal of unique reads) 5.5 MB
ENCFF718VRE.bed bed (peaks) 1.2 MB
ENCFF724UQB.fastq fastq (reads) 360.5 MB
ENCFF769KHB.bam bam (alignments) 145.4 MB
ENCFF782MAV.bigBed bigBed (peaks) 472.9 KB
ENCFF813HHP.bed bed (peaks) 534.2 KB
ENCFF827UEI.bigBed bigBed (peaks) 1.0 MB
ENCFF840SDN.bigWig bigWig (minus strand signal of unique reads) 12.2 MB
ENCFF885BWV.bed bed (peaks) 609.9 KB
ENCFF898XKM.bigWig bigWig (minus strand signal of unique reads) 5.3 MB
ENCFF943JBN.bed bed (peaks) 1.2 MB
ENCFF965AJN.bigWig bigWig (minus strand signal of unique reads) 12.1 MB
ENCFF996EIN.bed bed (peaks) 152.9 KB
ENCSR736AAG ENCSR via encode_api

eCLIP experiment on K562 against GTF2F1

Homo sapiens
36 data files
FileTypeSize
ENCFF004VCQ.bigBed bigBed (peaks) 2.8 MB
ENCFF036RER.bigWig bigWig (plus strand signal of unique reads) 13.5 MB
ENCFF044HRW.fastq fastq (reads) 341.6 MB
ENCFF104PYZ.bigBed bigBed (peaks) 1.9 MB
ENCFF157LVS.bigBed bigBed (peaks) 889.8 KB
ENCFF189QBX.bam bam (alignments) 212.4 MB
ENCFF189QNM.bigWig bigWig (minus strand signal of unique reads) 16.7 MB
ENCFF201QPI.bed bed (peaks) 168.9 KB
ENCFF215OMD.bam bam (alignments) 313.7 MB
ENCFF278ZCU.bed bed (peaks) 102.6 KB
ENCFF297XFG.bigWig bigWig (minus strand signal of unique reads) 13.0 MB
ENCFF371BCM.bigBed bigBed (peaks) 1.6 MB
ENCFF372THP.fastq fastq (reads) 381.8 MB
ENCFF379YWH.bed bed (peaks) 200.6 KB
ENCFF381DKU.bigBed bigBed (peaks) 2.9 MB
ENCFF410PTY.bed bed (peaks) 439.8 KB
ENCFF445JRX.bed bed (peaks) 102.4 KB
ENCFF457EAG.bigBed bigBed (peaks) 1.6 MB
ENCFF475LKG.bigBed bigBed (peaks) 561.8 KB
ENCFF500JSM.bed bed (peaks) 532.3 KB
ENCFF520MEC.fastq fastq (reads) 394.0 MB
ENCFF624FSB.bigWig bigWig (plus strand signal of unique reads) 13.5 MB
ENCFF634ATL.fastq fastq (reads) 424.3 MB
ENCFF699OHP.bigWig bigWig (minus strand signal of unique reads) 13.0 MB
ENCFF710NXQ.bed bed (peaks) 965.5 KB
ENCFF739CHZ.bed bed (peaks) 1.4 MB
ENCFF784AYX.bigWig bigWig (plus strand signal of unique reads) 17.5 MB
ENCFF864GYL.bam bam (alignments) 312.7 MB
ENCFF879QBD.bigBed bigBed (peaks) 437.8 KB
ENCFF913GBH.bed bed (peaks) 1.4 MB
ENCFF951JCN.bigBed bigBed (peaks) 1.2 MB
ENCFF958URO.bigWig bigWig (plus strand signal of unique reads) 17.4 MB
ENCFF962KBK.bigWig bigWig (minus strand signal of unique reads) 16.7 MB
ENCFF968DUU.bed bed (peaks) 962.2 KB
ENCFF983DGC.bigBed bigBed (peaks) 1.7 MB
ENCFF985HWL.bam bam (alignments) 211.6 MB
ENCSR200DKE ENCSR via encode_api

eCLIP experiment on K562 against MTPAP

Homo sapiens
35 data files
FileTypeSize
ENCFF055BJX.bigWig bigWig (minus strand signal of unique reads) 21.1 MB
ENCFF078WOB.bigBed bigBed (peaks) 1.6 MB
ENCFF096BLA.bam bam (alignments) 411.3 MB
ENCFF106NME.bigWig bigWig (plus strand signal of unique reads) 21.6 MB
ENCFF166IJL.bigBed bigBed (peaks) 4.0 MB
ENCFF169EUQ.bam bam (alignments) 536.7 MB
ENCFF169NFE.fastq fastq (reads) 1.0 GB
ENCFF229ESR.bigBed bigBed (peaks) 2.7 MB
ENCFF266NFK.bed bed (peaks) 2.0 MB
ENCFF273AWX.bed bed (peaks) 266.6 KB
ENCFF300ZUU.bigBed bigBed (peaks) 4.6 MB
ENCFF333GSE.bigBed bigBed (peaks) 4.6 MB
ENCFF333UPO.bigWig bigWig (plus strand signal of unique reads) 25.6 MB
ENCFF334ULI.bed bed (peaks) 227.7 KB
ENCFF362LLE.bigWig bigWig (minus strand signal of unique reads) 25.1 MB
ENCFF386BEJ.fastq fastq (reads) 621.5 MB
ENCFF428LUE.bigBed bigBed (peaks) 679.1 KB
ENCFF436FUS.bed bed (peaks) 2.4 MB
ENCFF448TUI.bed bed (peaks) 2.0 MB
ENCFF467ZPC.bed bed (peaks) 845.3 KB
ENCFF534XFQ.bigBed bigBed (peaks) 4.0 MB
ENCFF546ZFM.bed bed (peaks) 21.2 KB
ENCFF569EHE.fastq fastq (reads) 609.8 MB
ENCFF577IRX.bigWig bigWig (minus strand signal of unique reads) 20.7 MB
ENCFF608DJN.bigWig bigWig (plus strand signal of unique reads) 26.2 MB
ENCFF732HBQ.bam bam (alignments) 519.7 MB
ENCFF779VXW.bigWig bigWig (minus strand signal of unique reads) 24.6 MB
ENCFF837YNN.bed bed (peaks) 746.8 KB
ENCFF883KCN.bed bed (peaks) 23.0 KB
ENCFF891WPR.bigBed bigBed (peaks) 510.6 KB
ENCFF929HPV.bigWig bigWig (plus strand signal of unique reads) 22.1 MB
ENCFF962AUM.fastq fastq (reads) 1.0 GB
ENCFF984DXU.bed bed (peaks) 2.4 MB
ENCFF986XOF.bigBed bigBed (peaks) 1.7 MB
ENCFF998TQA.bam bam (alignments) 424.7 MB
ENCSR861GYE ENCSR via encode_api

eCLIP experiment on HepG2 against Lin28B

Homo sapiens
36 data files
FileTypeSize
ENCFF011FOO.bigWig bigWig (minus strand signal of unique reads) 7.4 MB
ENCFF080RIV.bigBed bigBed (peaks) 3.6 MB
ENCFF246BGL.bed bed (peaks) 702.8 KB
ENCFF270ONN.bed bed (peaks) 235.5 KB
ENCFF284RSI.bam bam (alignments) 152.2 MB
ENCFF291ZHD.bigWig bigWig (plus strand signal of unique reads) 7.5 MB
ENCFF316QQL.bigBed bigBed (peaks) 2.0 MB
ENCFF323FTX.bigBed bigBed (peaks) 771.0 KB
ENCFF341XMP.bed bed (peaks) 86.6 KB
ENCFF364ZHG.bed bed (peaks) 375.8 KB
ENCFF381VVY.bed bed (peaks) 715.3 KB
ENCFF451AQL.bed bed (peaks) 88.3 KB
ENCFF457EXU.bigBed bigBed (peaks) 2.0 MB
ENCFF459WIT.fastq fastq (reads) 297.1 MB
ENCFF476USO.bigWig bigWig (plus strand signal of unique reads) 7.4 MB
ENCFF515HHT.bigBed bigBed (peaks) 1.0 MB
ENCFF606QUL.bigBed bigBed (peaks) 2.1 MB
ENCFF612EYL.bigWig bigWig (minus strand signal of unique reads) 13.8 MB
ENCFF661GMQ.bigWig bigWig (minus strand signal of unique reads) 14.3 MB
ENCFF727NEF.bigBed bigBed (peaks) 1.3 MB
ENCFF756VXR.bam bam (alignments) 261.0 MB
ENCFF763NGW.bam bam (alignments) 272.9 MB
ENCFF771INC.bigBed bigBed (peaks) 554.8 KB
ENCFF780ZPW.bigWig bigWig (minus strand signal of unique reads) 7.3 MB
ENCFF794YIP.fastq fastq (reads) 203.7 MB
ENCFF838WUR.bigBed bigBed (peaks) 1.3 MB
ENCFF880XJZ.bed bed (peaks) 549.6 KB
ENCFF894MMI.bed bed (peaks) 900.0 KB
ENCFF902IPB.bigWig bigWig (plus strand signal of unique reads) 14.5 MB
ENCFF905RXQ.bigWig bigWig (plus strand signal of unique reads) 14.1 MB
ENCFF909VPB.bed bed (peaks) 1.2 MB
ENCFF916HAS.fastq fastq (reads) 284.2 MB
ENCFF917QVW.fastq fastq (reads) 217.3 MB
ENCFF925HAH.bam bam (alignments) 157.3 MB
ENCFF976KYV.bed bed (peaks) 1.2 MB
ENCFF996PHJ.bigBed bigBed (peaks) 1.9 MB
ENCSR805SRN ENCSR via encode_api

eCLIP experiment on HepG2 against LARP4

Homo sapiens
35 data files
FileTypeSize
ENCFF080EMQ.bam bam (alignments) 490.7 MB
ENCFF098TDG.bigWig bigWig (minus strand signal of unique reads) 22.6 MB
ENCFF130RAQ.bed bed (peaks) 2.1 MB
ENCFF143CAC.bed bed (peaks) 848.2 KB
ENCFF162UWK.bigWig bigWig (plus strand signal of unique reads) 22.1 MB
ENCFF163HLQ.fastq fastq (reads) 553.0 MB
ENCFF202RTW.bam bam (alignments) 467.6 MB
ENCFF203QHV.bigBed bigBed (peaks) 3.1 MB
ENCFF205BHB.bigWig bigWig (minus strand signal of unique reads) 22.9 MB
ENCFF256CCS.bigWig bigWig (minus strand signal of unique reads) 21.6 MB
ENCFF259KVP.bam bam (alignments) 470.8 MB
ENCFF263BIJ.bed bed (peaks) 131.7 KB
ENCFF267JLV.bigBed bigBed (peaks) 4.1 MB
ENCFF276CTM.fastq fastq (reads) 598.1 MB
ENCFF279AYO.bigWig bigWig (plus strand signal of unique reads) 23.5 MB
ENCFF284OHP.bam bam (alignments) 499.9 MB
ENCFF288SGB.bed bed (peaks) 2.2 MB
ENCFF328SKZ.bigBed bigBed (peaks) 1.7 MB
ENCFF362EMN.fastq fastq (reads) 512.3 MB
ENCFF365UUW.fastq fastq (reads) 552.4 MB
ENCFF384HVB.bigWig bigWig (plus strand signal of unique reads) 22.8 MB
ENCFF449XCL.bigBed bigBed (peaks) 1.7 MB
ENCFF519RGA.bed bed (peaks) 2.1 MB
ENCFF534JCV.bed bed (peaks) 126.0 KB
ENCFF540HIX.bed bed (peaks) 2.1 MB
ENCFF594OWE.bigBed bigBed (peaks) 790.9 KB
ENCFF672BIX.bigWig bigWig (minus strand signal of unique reads) 22.1 MB
ENCFF696YTL.bigBed bigBed (peaks) 735.0 KB
ENCFF767VHD.bigBed bigBed (peaks) 4.1 MB
ENCFF777WFM.bigBed bigBed (peaks) 4.3 MB
ENCFF779LAQ.bed bed (peaks) 900.6 KB
ENCFF786NHD.bed bed (peaks) 316.2 KB
ENCFF806IJJ.bigBed bigBed (peaks) 4.1 MB
ENCFF955OZJ.bigWig bigWig (plus strand signal of unique reads) 23.4 MB
ENCFF988TLN.bed bed (peaks) 349.7 KB
ENCSR081JYH ENCSR via encode_api

eCLIP experiment on K562 against NSUN2

Homo sapiens
34 data files
FileTypeSize
ENCFF036IYW.bed bed (peaks) 3.5 KB
ENCFF062YKQ.bed bed (peaks) 350.1 KB
ENCFF121GFV.bigBed bigBed (peaks) 610.8 KB
ENCFF149VKG.fastq fastq (reads) 541.9 MB
ENCFF233PRB.bed bed (peaks) 4.0 KB
ENCFF247XFK.bigWig bigWig (plus strand signal of unique reads) 5.4 MB
ENCFF257SMG.bed bed (peaks) 95.8 KB
ENCFF270MTA.bed bed (peaks) 358.0 KB
ENCFF308FEZ.bigWig bigWig (minus strand signal of unique reads) 5.1 MB
ENCFF349JHA.bigWig bigWig (minus strand signal of unique reads) 2.0 MB
ENCFF384EMH.bam bam (alignments) 148.9 MB
ENCFF408VMJ.bigBed bigBed (peaks) 226.2 KB
ENCFF479GVM.bam bam (alignments) 257.6 MB
ENCFF494YYE.bigWig bigWig (plus strand signal of unique reads) 5.3 MB
ENCFF496SLO.bed bed (peaks) 94.5 KB
ENCFF499MHW.bed bed (peaks) 208.2 KB
ENCFF533YVA.bigWig bigWig (plus strand signal of unique reads) 2.1 MB
ENCFF572GUG.bigBed bigBed (peaks) 620.8 KB
ENCFF606PVP.bed bed (peaks) 85.4 KB
ENCFF623LRO.bigBed bigBed (peaks) 438.1 KB
ENCFF638RGP.bed bed (peaks) 88.5 KB
ENCFF642IRY.bigBed bigBed (peaks) 139.7 KB
ENCFF676RKY.bigBed bigBed (peaks) 217.0 KB
ENCFF769VDH.bigWig bigWig (minus strand signal of unique reads) 5.2 MB
ENCFF771UIV.bigWig bigWig (minus strand signal of unique reads) 2.0 MB
ENCFF790KXQ.bam bam (alignments) 147.5 MB
ENCFF823PXI.bed bed (peaks) 53.5 KB
ENCFF839INY.fastq fastq (reads) 381.8 MB
ENCFF852NUQ.fastq fastq (reads) 344.4 MB
ENCFF862LPP.bam bam (alignments) 252.7 MB
ENCFF876KFA.bigBed bigBed (peaks) 207.6 KB
ENCFF877FZZ.fastq fastq (reads) 495.0 MB
ENCFF902LYL.bigWig bigWig (plus strand signal of unique reads) 2.0 MB
ENCFF945PHT.bigBed bigBed (peaks) 225.8 KB
ENCSR044NGV ENCSR via encode_api

eCLIP control experiment on HepG2 against XRCC6

Homo sapiens
8 data files
FileTypeSize
ENCFF295ORV.bigWig bigWig (plus strand signal of unique reads) 15.0 MB
ENCFF350VUK.bam bam (alignments) 271.1 MB
ENCFF574XRV.fastq fastq (reads) 559.1 MB
ENCFF594ZPR.bam bam (alignments) 275.1 MB
ENCFF656XSL.fastq fastq (reads) 573.2 MB
ENCFF900QBB.bigWig bigWig (minus strand signal of unique reads) 14.5 MB
ENCFF948HJP.bigWig bigWig (plus strand signal of unique reads) 15.3 MB
ENCFF976AHI.bigWig bigWig (minus strand signal of unique reads) 14.7 MB
ENCSR001VAC ENCSR via encode_api

eCLIP experiment on K562 against NOLC1

Homo sapiens
30 data files
FileTypeSize
ENCFF012GRH.bigBed bigBed (peaks) 2.7 MB
ENCFF020GRQ.bigBed bigBed (peaks) 3.7 MB
ENCFF102JHG.bam bam (alignments) 273.3 MB
ENCFF120UIK.fastq fastq (reads) 443.0 MB
ENCFF151HRC.bed bed (peaks) 35.7 KB
ENCFF151WQL.bigBed bigBed (peaks) 538.4 KB
ENCFF193VAQ.bed bed (peaks) 1.3 MB
ENCFF195WCS.bigWig bigWig (plus strand signal of unique reads) 15.6 MB
ENCFF229LUI.bigWig bigWig (minus strand signal of unique reads) 21.5 MB
ENCFF287SEB.bed bed (peaks) 671.3 KB
ENCFF308PTN.bigBed bigBed (peaks) 2.6 MB
ENCFF315OLY.bam bam (alignments) 438.3 MB
ENCFF327YTD.bed bed (peaks) 36.1 KB
ENCFF362IRW.bam bam (alignments) 460.6 MB
ENCFF436BMC.bigBed bigBed (peaks) 3.8 MB
ENCFF470KOV.bigWig bigWig (plus strand signal of unique reads) 23.4 MB
ENCFF477USX.bigWig bigWig (plus strand signal of unique reads) 15.1 MB
ENCFF480NPA.bigWig bigWig (plus strand signal of unique reads) 22.3 MB
ENCFF498BYQ.fastq fastq (reads) 418.6 MB
ENCFF559UDZ.bigWig bigWig (minus strand signal of unique reads) 14.7 MB
ENCFF599BAD.bigWig bigWig (minus strand signal of unique reads) 22.5 MB
ENCFF624HKO.bam bam (alignments) 285.4 MB
ENCFF678KRL.fastq fastq (reads) 458.6 MB
ENCFF754NXM.bed bed (peaks) 1.3 MB
ENCFF760NPR.bed bed (peaks) 701.0 KB
ENCFF810IDY.bed bed (peaks) 1.9 MB
ENCFF822WIJ.bigWig bigWig (minus strand signal of unique reads) 15.1 MB
ENCFF915RFF.bed bed (peaks) 237.5 KB
ENCFF942SMX.bed bed (peaks) 1.9 MB
ENCFF974GXQ.fastq fastq (reads) 487.1 MB
ENCSR786TSC ENCSR via encode_api

eCLIP experiment on HepG2 against ILF3

Homo sapiens
34 data files
FileTypeSize
ENCFF071QDP.bed bed (peaks) 74.8 KB
ENCFF074UXY.bigBed bigBed (peaks) 1.3 MB
ENCFF160SMQ.bed bed (peaks) 307.7 KB
ENCFF163SPX.bigWig bigWig (minus strand signal of unique reads) 32.7 MB
ENCFF180KDU.bigBed bigBed (peaks) 640.7 KB
ENCFF245KXT.bam bam (alignments) 289.4 MB
ENCFF286FBL.bam bam (alignments) 640.3 MB
ENCFF314QOR.bed bed (peaks) 815.1 KB
ENCFF340GPD.bed bed (peaks) 3.4 MB
ENCFF357DPL.fastq fastq (reads) 553.7 MB
ENCFF360ESL.bigWig bigWig (plus strand signal of unique reads) 33.8 MB
ENCFF397SJF.bigBed bigBed (peaks) 3.8 MB
ENCFF409NUO.bam bam (alignments) 296.9 MB
ENCFF431PMM.fastq fastq (reads) 726.4 MB
ENCFF460MRE.bed bed (peaks) 2.0 MB
ENCFF479BNC.fastq fastq (reads) 736.6 MB
ENCFF485DDA.bed bed (peaks) 69.1 KB
ENCFF526RKP.bigWig bigWig (minus strand signal of unique reads) 33.3 MB
ENCFF535COB.bed bed (peaks) 3.4 MB
ENCFF561XLN.bigBed bigBed (peaks) 671.2 KB
ENCFF568MYZ.fastq fastq (reads) 560.6 MB
ENCFF569JRG.bigBed bigBed (peaks) 6.1 MB
ENCFF657ABW.bigBed bigBed (peaks) 1.8 MB
ENCFF657PVX.bigWig bigWig (plus strand signal of unique reads) 19.1 MB
ENCFF702XFC.bam bam (alignments) 621.9 MB
ENCFF732JFG.bed bed (peaks) 719.1 KB
ENCFF742FIR.bigWig bigWig (minus strand signal of unique reads) 18.2 MB
ENCFF781BNR.bigWig bigWig (minus strand signal of unique reads) 18.5 MB
ENCFF824VQC.bigWig bigWig (plus strand signal of unique reads) 34.4 MB
ENCFF841BJF.bed bed (peaks) 2.0 MB
ENCFF889CSO.bigBed bigBed (peaks) 6.0 MB
ENCFF963MRY.bigBed bigBed (peaks) 3.8 MB
ENCFF964SNJ.bed bed (peaks) 278.3 KB
ENCFF991DQV.bigWig bigWig (plus strand signal of unique reads) 18.7 MB
ENCSR888YTT ENCSR via encode_api

eCLIP experiment on K562 against LARP4

Homo sapiens
36 data files
FileTypeSize
ENCFF013LBJ.bed bed (peaks) 834.2 KB
ENCFF046YJP.bed bed (peaks) 470.3 KB
ENCFF048DXF.bigBed bigBed (peaks) 621.4 KB
ENCFF109RNC.fastq fastq (reads) 567.1 MB
ENCFF139BSF.bed bed (peaks) 340.2 KB
ENCFF140LQE.bigBed bigBed (peaks) 1.9 MB
ENCFF157DJT.bigBed bigBed (peaks) 452.6 KB
ENCFF157OQS.bigBed bigBed (peaks) 1.5 MB
ENCFF169FBJ.bigBed bigBed (peaks) 2.1 MB
ENCFF244OJJ.bigWig bigWig (minus strand signal of unique reads) 12.6 MB
ENCFF257EYW.bigBed bigBed (peaks) 1.8 MB
ENCFF259HTD.bed bed (peaks) 1.1 MB
ENCFF284NOU.bed bed (peaks) 10.9 KB
ENCFF290PER.bed bed (peaks) 179.1 KB
ENCFF305LNT.bed bed (peaks) 1.1 MB
ENCFF438YGF.bigBed bigBed (peaks) 2.1 MB
ENCFF483RXE.bigWig bigWig (plus strand signal of unique reads) 6.9 MB
ENCFF498JIR.fastq fastq (reads) 574.0 MB
ENCFF522BBU.bigBed bigBed (peaks) 1.9 MB
ENCFF528CMP.bam bam (alignments) 142.4 MB
ENCFF544HGJ.bed bed (peaks) 1.2 MB
ENCFF554KDS.bigWig bigWig (plus strand signal of unique reads) 13.1 MB
ENCFF642AQR.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCFF644NKM.bam bam (alignments) 206.1 MB
ENCFF685FNB.bam bam (alignments) 203.1 MB
ENCFF730QLX.bigWig bigWig (minus strand signal of unique reads) 6.6 MB
ENCFF745LDV.bigBed bigBed (peaks) 3.2 MB
ENCFF773GGY.bam bam (alignments) 139.7 MB
ENCFF774DRK.bigWig bigWig (minus strand signal of unique reads) 6.6 MB
ENCFF780ORI.fastq fastq (reads) 414.6 MB
ENCFF876VWR.bigBed bigBed (peaks) 952.7 KB
ENCFF902BBF.bigWig bigWig (minus strand signal of unique reads) 12.5 MB
ENCFF947CIN.bed bed (peaks) 11.0 KB
ENCFF982PZA.bigWig bigWig (plus strand signal of unique reads) 6.8 MB
ENCFF984MPJ.fastq fastq (reads) 417.6 MB
ENCFF986MGC.bed bed (peaks) 1.2 MB
ENCSR825SVO ENCSR via encode_api

eCLIP experiment on K562 against AARS

Homo sapiens
35 data files
FileTypeSize
ENCFF128BDG.bed bed (peaks) 1.4 KB
ENCFF138HJK.bigBed bigBed (peaks) 1.4 MB
ENCFF177VXU.bigBed bigBed (peaks) 430.0 KB
ENCFF192GIC.bigWig bigWig (minus strand signal of unique reads) 4.2 MB
ENCFF202EVU.bed bed (peaks) 231.8 KB
ENCFF236UYB.bam bam (alignments) 84.8 MB
ENCFF249ULX.fastq fastq (reads) 880.3 MB
ENCFF279SZJ.bigWig bigWig (minus strand signal of unique reads) 4.7 MB
ENCFF315MYF.fastq fastq (reads) 597.4 MB
ENCFF319HWE.bigBed bigBed (peaks) 875.2 KB
ENCFF354UTQ.bigWig bigWig (plus strand signal of unique reads) 5.0 MB
ENCFF374VRV.bed bed (peaks) 893.1 KB
ENCFF386NTN.bigWig bigWig (plus strand signal of unique reads) 4.2 MB
ENCFF388LRZ.bigWig bigWig (minus strand signal of unique reads) 4.6 MB
ENCFF400HPZ.bed bed (peaks) 782.6 KB
ENCFF432TQD.bigBed bigBed (peaks) 1.3 MB
ENCFF444EFX.bigWig bigWig (plus strand signal of unique reads) 4.4 MB
ENCFF460UUV.bed bed (peaks) 616.0 KB
ENCFF500QFI.bigWig bigWig (minus strand signal of unique reads) 4.0 MB
ENCFF502RSZ.bam bam (alignments) 79.7 MB
ENCFF505WTD.fastq fastq (reads) 832.4 MB
ENCFF563LDK.bigBed bigBed (peaks) 1.2 MB
ENCFF596TWK.bigBed bigBed (peaks) 1.6 MB
ENCFF604TLE.bigWig bigWig (plus strand signal of unique reads) 4.8 MB
ENCFF684FVK.bed bed (peaks) 861.2 KB
ENCFF692AEZ.bam bam (alignments) 94.1 MB
ENCFF694QCY.bam bam (alignments) 98.2 MB
ENCFF698SDU.fastq fastq (reads) 636.8 MB
ENCFF756RYJ.bed bed (peaks) 1.5 KB
ENCFF781HKQ.bigBed bigBed (peaks) 461.4 KB
ENCFF820XFL.bigBed bigBed (peaks) 2.3 MB
ENCFF883DWR.bed bed (peaks) 732.8 KB
ENCFF920KVN.bed bed (peaks) 522.5 KB
ENCFF939QQK.bed bed (peaks) 207.5 KB
ENCFF964FXU.bigBed bigBed (peaks) 1.5 MB
ENCSR154HRN ENCSR via encode_api

eCLIP experiment on K562 against HNRNPA1

Homo sapiens
36 data files
FileTypeSize
ENCFF012EDL.bam bam (alignments) 497.0 MB
ENCFF018UJY.bigWig bigWig (plus strand signal of unique reads) 15.4 MB
ENCFF075GYH.bigBed bigBed (peaks) 1.1 MB
ENCFF099FEV.bigWig bigWig (plus strand signal of unique reads) 30.9 MB
ENCFF100JBV.bed bed (peaks) 3.2 MB
ENCFF107UYK.fastq fastq (reads) 347.5 MB
ENCFF174RLY.bed bed (peaks) 1.3 MB
ENCFF288SMV.bed bed (peaks) 129.8 KB
ENCFF292CIT.bam bam (alignments) 215.6 MB
ENCFF352GSS.fastq fastq (reads) 155.1 MB
ENCFF380HEW.bed bed (peaks) 381.6 KB
ENCFF392AEV.bed bed (peaks) 4.7 KB
ENCFF401DKP.bigWig bigWig (plus strand signal of unique reads) 15.3 MB
ENCFF434TZT.bigBed bigBed (peaks) 2.2 MB
ENCFF457MNN.bed bed (peaks) 203.7 KB
ENCFF476QPD.bigBed bigBed (peaks) 800.4 KB
ENCFF480LJU.bigWig bigWig (minus strand signal of unique reads) 14.7 MB
ENCFF520LTV.bigWig bigWig (minus strand signal of unique reads) 29.6 MB
ENCFF537HGP.bigBed bigBed (peaks) 2.0 MB
ENCFF546OAU.fastq fastq (reads) 356.1 MB
ENCFF549HTU.bigBed bigBed (peaks) 5.7 MB
ENCFF553MNY.bigBed bigBed (peaks) 2.1 MB
ENCFF554KBC.bigBed bigBed (peaks) 481.3 KB
ENCFF571IRN.bam bam (alignments) 495.6 MB
ENCFF614BUK.bigBed bigBed (peaks) 306.3 KB
ENCFF615KJU.bed bed (peaks) 3.2 MB
ENCFF677OHD.bigWig bigWig (minus strand signal of unique reads) 14.6 MB
ENCFF697CNE.bigBed bigBed (peaks) 5.7 MB
ENCFF697PSM.bigWig bigWig (plus strand signal of unique reads) 30.9 MB
ENCFF850NCY.fastq fastq (reads) 160.6 MB
ENCFF853SRF.bigBed bigBed (peaks) 1.6 MB
ENCFF876SGL.bam bam (alignments) 214.1 MB
ENCFF902IDT.bed bed (peaks) 1.3 MB
ENCFF955PCQ.bed bed (peaks) 4.0 KB
ENCFF993GLW.bed bed (peaks) 587.7 KB
ENCFF997XKK.bigWig bigWig (minus strand signal of unique reads) 29.6 MB
ENCSR769UEW ENCSR via encode_api

eCLIP experiment on HepG2 against HNRNPA1

Homo sapiens
36 data files
FileTypeSize
ENCFF002NAF.bigBed bigBed (peaks) 5.6 MB
ENCFF010PNI.bigBed bigBed (peaks) 2.6 MB
ENCFF061FBN.bigWig bigWig (minus strand signal of unique reads) 27.5 MB
ENCFF068NOP.fastq fastq (reads) 663.0 MB
ENCFF080DPL.bigWig bigWig (plus strand signal of unique reads) 51.0 MB
ENCFF105KLN.bigBed bigBed (peaks) 2.1 MB
ENCFF121XLA.bed bed (peaks) 2.5 KB
ENCFF224UUW.fastq fastq (reads) 677.6 MB
ENCFF276NLJ.bed bed (peaks) 240.6 KB
ENCFF330OFU.bam bam (alignments) 954.9 MB
ENCFF356JGP.bed bed (peaks) 491.8 KB
ENCFF361AWK.fastq fastq (reads) 363.1 MB
ENCFF371UCL.bigBed bigBed (peaks) 4.2 MB
ENCFF396YUX.bigBed bigBed (peaks) 540.0 KB
ENCFF435FCH.bigBed bigBed (peaks) 438.0 KB
ENCFF460DOL.bigWig bigWig (minus strand signal of unique reads) 49.6 MB
ENCFF535MAE.bed bed (peaks) 3.0 MB
ENCFF561NYA.bigWig bigWig (plus strand signal of unique reads) 29.2 MB
ENCFF599CUU.bed bed (peaks) 3.1 MB
ENCFF604WJZ.bed bed (peaks) 5.2 MB
ENCFF644TNI.bigWig bigWig (minus strand signal of unique reads) 28.2 MB
ENCFF690NVV.bam bam (alignments) 504.8 MB
ENCFF704FXH.bigBed bigBed (peaks) 8.6 MB
ENCFF706CRY.bigWig bigWig (plus strand signal of unique reads) 50.8 MB
ENCFF722RBO.bed bed (peaks) 5.3 MB
ENCFF797GSK.bed bed (peaks) 2.5 KB
ENCFF804BLC.bam bam (alignments) 487.3 MB
ENCFF867GHS.bed bed (peaks) 672.2 KB
ENCFF870SOY.bigWig bigWig (plus strand signal of unique reads) 28.5 MB
ENCFF877IHN.bigWig bigWig (minus strand signal of unique reads) 49.4 MB
ENCFF923MNO.bigBed bigBed (peaks) 1.2 MB
ENCFF924ZOP.bigBed bigBed (peaks) 8.6 MB
ENCFF934VGP.bigBed bigBed (peaks) 967.1 KB
ENCFF938FPK.bed bed (peaks) 174.4 KB
ENCFF963VIU.bam bam (alignments) 959.9 MB
ENCFF997GSC.fastq fastq (reads) 328.0 MB
ENCSR589YHM ENCSR via encode_api

eCLIP experiment on K562 against HLTF

Homo sapiens
36 data files
FileTypeSize
ENCFF003PBU.bigBed bigBed (peaks) 3.5 MB
ENCFF043RMT.bam bam (alignments) 404.8 MB
ENCFF057MVG.bam bam (alignments) 419.1 MB
ENCFF067JFA.bigWig bigWig (plus strand signal of unique reads) 20.2 MB
ENCFF100BWD.bigBed bigBed (peaks) 850.6 KB
ENCFF114YWP.bed bed (peaks) 1.9 MB
ENCFF115CKY.bam bam (alignments) 396.5 MB
ENCFF117EMD.bed bed (peaks) 356.5 KB
ENCFF136FUR.bigWig bigWig (minus strand signal of unique reads) 19.3 MB
ENCFF249RCK.bed bed (peaks) 436.5 KB
ENCFF316ABR.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCFF316ZTK.bigBed bigBed (peaks) 3.4 MB
ENCFF325PJW.fastq fastq (reads) 634.6 MB
ENCFF351MIX.bigWig bigWig (plus strand signal of unique reads) 20.0 MB
ENCFF370ROE.bam bam (alignments) 427.8 MB
ENCFF406MSI.bed bed (peaks) 6.3 KB
ENCFF442CAN.fastq fastq (reads) 618.9 MB
ENCFF538MPL.fastq fastq (reads) 631.6 MB
ENCFF565KZA.bigWig bigWig (plus strand signal of unique reads) 21.4 MB
ENCFF585JGS.bigBed bigBed (peaks) 1000.8 KB
ENCFF606WPI.bigBed bigBed (peaks) 3.7 MB
ENCFF623DVN.bed bed (peaks) 4.3 KB
ENCFF660SOX.bed bed (peaks) 1.1 MB
ENCFF678TDV.bigBed bigBed (peaks) 1.9 MB
ENCFF726GRF.bed bed (peaks) 1.8 MB
ENCFF735BFL.bigWig bigWig (minus strand signal of unique reads) 21.0 MB
ENCFF806QVQ.bigWig bigWig (minus strand signal of unique reads) 20.8 MB
ENCFF808XUD.bigBed bigBed (peaks) 3.6 MB
ENCFF814HAY.fastq fastq (reads) 612.9 MB
ENCFF834GXD.bigWig bigWig (plus strand signal of unique reads) 21.7 MB
ENCFF843OHC.bigBed bigBed (peaks) 2.1 MB
ENCFF854GBT.bed bed (peaks) 1.8 MB
ENCFF918RNZ.bigBed bigBed (peaks) 3.7 MB
ENCFF950GJC.bigBed bigBed (peaks) 4.2 MB
ENCFF952TOI.bed bed (peaks) 1.9 MB
ENCFF988KWU.bed bed (peaks) 945.1 KB
ENCSR279UJF ENCSR via encode_api

eCLIP experiment on HepG2 against SF3B4

Homo sapiens
35 data files
FileTypeSize
ENCFF016DAZ.bigWig bigWig (plus strand signal of unique reads) 8.5 MB
ENCFF040BYE.bam bam (alignments) 114.9 MB
ENCFF073IJF.bed bed (peaks) 126.5 KB
ENCFF097FBP.bed bed (peaks) 125.1 KB
ENCFF164CMJ.bigBed bigBed (peaks) 763.8 KB
ENCFF183UGH.bigWig bigWig (minus strand signal of unique reads) 8.1 MB
ENCFF232FWK.bed bed (peaks) 903.0 KB
ENCFF319QWS.bigBed bigBed (peaks) 1.8 MB
ENCFF344PIE.bigBed bigBed (peaks) 1.8 MB
ENCFF352PAK.bam bam (alignments) 112.6 MB
ENCFF363PGR.bed bed (peaks) 898.6 KB
ENCFF367PPA.bed bed (peaks) 343.9 KB
ENCFF467KAQ.bigWig bigWig (plus strand signal of unique reads) 9.0 MB
ENCFF483JLM.bigBed bigBed (peaks) 1.5 MB
ENCFF483VLR.bam bam (alignments) 112.2 MB
ENCFF494AZP.bed bed (peaks) 660.3 KB
ENCFF512AHE.bigBed bigBed (peaks) 2.4 MB
ENCFF546FNN.bigBed bigBed (peaks) 1.3 MB
ENCFF581RVY.bed bed (peaks) 890.3 KB
ENCFF609YUD.bigBed bigBed (peaks) 1.4 MB
ENCFF616ZLK.bigWig bigWig (minus strand signal of unique reads) 8.7 MB
ENCFF645FKC.bigWig bigWig (plus strand signal of unique reads) 8.5 MB
ENCFF645GQJ.bigWig bigWig (minus strand signal of unique reads) 8.1 MB
ENCFF702GTT.fastq fastq (reads) 207.7 MB
ENCFF706GBT.bigWig bigWig (minus strand signal of unique reads) 8.7 MB
ENCFF722QLW.fastq fastq (reads) 207.0 MB
ENCFF744CKU.bed bed (peaks) 896.1 KB
ENCFF746RAA.bed bed (peaks) 712.4 KB
ENCFF769WSU.bigBed bigBed (peaks) 654.7 KB
ENCFF782HSL.bigBed bigBed (peaks) 1.9 MB
ENCFF795NIS.bed bed (peaks) 294.7 KB
ENCFF841WFK.bigWig bigWig (plus strand signal of unique reads) 9.0 MB
ENCFF855AZI.bam bam (alignments) 114.9 MB
ENCFF869UXX.fastq fastq (reads) 205.4 MB
ENCFF992GNI.fastq fastq (reads) 200.0 MB
ENCSR110XNS ENCSR via encode_api

eCLIP control experiment on HepG2 against HNRNPA1

Homo sapiens
8 data files
FileTypeSize
ENCFF169YBI.bigWig bigWig (plus strand signal of unique reads) 12.7 MB
ENCFF184MNE.bigWig bigWig (plus strand signal of unique reads) 12.2 MB
ENCFF205PBQ.bam bam (alignments) 153.4 MB
ENCFF389NBF.bigWig bigWig (minus strand signal of unique reads) 11.9 MB
ENCFF483JSE.fastq fastq (reads) 314.5 MB
ENCFF536WIF.bam bam (alignments) 155.6 MB
ENCFF825RPQ.bigWig bigWig (minus strand signal of unique reads) 12.3 MB
ENCFF854MYE.fastq fastq (reads) 328.7 MB
ENCSR497ANA ENCSR via encode_api

eCLIP control experiment on HepG2 against HNRNPC

Homo sapiens
8 data files
FileTypeSize
ENCFF005TOO.bigWig bigWig (minus strand signal of unique reads) 22.4 MB
ENCFF109ZAY.bigWig bigWig (minus strand signal of unique reads) 22.5 MB
ENCFF357SNM.fastq fastq (reads) 410.0 MB
ENCFF412YDY.fastq fastq (reads) 435.8 MB
ENCFF533EON.bigWig bigWig (plus strand signal of unique reads) 23.1 MB
ENCFF638TZT.bigWig bigWig (plus strand signal of unique reads) 22.8 MB
ENCFF823ZZZ.bam bam (alignments) 459.4 MB
ENCFF885KNL.bam bam (alignments) 462.2 MB
ENCSR975KIR ENCSR via encode_api

eCLIP experiment on K562 against IGF2BP1

Homo sapiens
36 data files
FileTypeSize
ENCFF002KWR.bam bam (alignments) 264.0 MB
ENCFF034HCU.bed bed (peaks) 856.2 KB
ENCFF054IWW.bigBed bigBed (peaks) 1.7 MB
ENCFF073EAX.bigBed bigBed (peaks) 1.0 MB
ENCFF088JXR.fastq fastq (reads) 221.6 MB
ENCFF142XLV.bigWig bigWig (minus strand signal of unique reads) 11.6 MB
ENCFF185IDD.bed bed (peaks) 1.0 MB
ENCFF188WYT.bed bed (peaks) 1.1 MB
ENCFF197PZA.bigBed bigBed (peaks) 2.6 MB
ENCFF228PAK.bigBed bigBed (peaks) 2.5 MB
ENCFF238DNC.bigWig bigWig (minus strand signal of unique reads) 13.6 MB
ENCFF271KYF.fastq fastq (reads) 171.9 MB
ENCFF304RKO.bigBed bigBed (peaks) 2.2 MB
ENCFF324IWT.bigBed bigBed (peaks) 2.1 MB
ENCFF326QAR.bigWig bigWig (plus strand signal of unique reads) 14.2 MB
ENCFF383VVS.fastq fastq (reads) 170.4 MB
ENCFF399XVR.fastq fastq (reads) 219.6 MB
ENCFF431LLE.bed bed (peaks) 377.6 KB
ENCFF435MEM.bed bed (peaks) 1.3 MB
ENCFF449VXW.bam bam (alignments) 186.8 MB
ENCFF540OLV.bigWig bigWig (minus strand signal of unique reads) 13.7 MB
ENCFF544NQL.bam bam (alignments) 263.7 MB
ENCFF650LMV.bed bed (peaks) 128.6 KB
ENCFF677VOR.bigBed bigBed (peaks) 888.8 KB
ENCFF701YCW.bed bed (peaks) 1.0 MB
ENCFF726PXZ.bigWig bigWig (plus strand signal of unique reads) 12.1 MB
ENCFF733OIX.bigWig bigWig (plus strand signal of unique reads) 12.1 MB
ENCFF760CSI.bigBed bigBed (peaks) 4.2 MB
ENCFF792IKF.bigWig bigWig (minus strand signal of unique reads) 11.6 MB
ENCFF801TBQ.bed bed (peaks) 477.4 KB
ENCFF809JFX.bigBed bigBed (peaks) 3.4 MB
ENCFF810AIK.bigWig bigWig (plus strand signal of unique reads) 14.2 MB
ENCFF827GWO.bigBed bigBed (peaks) 2.2 MB
ENCFF853FGC.bed bed (peaks) 1.3 MB
ENCFF890VLH.bed bed (peaks) 127.2 KB
ENCFF956NTH.bam bam (alignments) 187.2 MB
ENCSR077KVG ENCSR via encode_api

eCLIP control experiment on HepG2 against IGF2BP3

Homo sapiens
8 data files
FileTypeSize
ENCFF052DII.bigWig bigWig (plus strand signal of unique reads) 6.3 MB
ENCFF295AAK.bigWig bigWig (plus strand signal of unique reads) 6.3 MB
ENCFF401NKA.bigWig bigWig (minus strand signal of unique reads) 6.2 MB
ENCFF580DZG.bigWig bigWig (minus strand signal of unique reads) 6.1 MB
ENCFF655LHZ.bam bam (alignments) 149.9 MB
ENCFF742YFO.fastq fastq (reads) 299.8 MB
ENCFF843CUY.fastq fastq (reads) 295.4 MB
ENCFF983FIG.bam bam (alignments) 148.8 MB
ENCSR267UCX ENCSR via encode_api

eCLIP experiment on HepG2 against HNRNPM

Homo sapiens
36 data files
FileTypeSize
ENCFF040JSC.bed bed (peaks) 2.4 MB
ENCFF058AGC.bigWig bigWig (plus strand signal of unique reads) 23.4 MB
ENCFF060XTP.bed bed (peaks) 697.3 KB
ENCFF079OKS.bed bed (peaks) 257.2 KB
ENCFF131SXQ.bigBed bigBed (peaks) 4.4 MB
ENCFF136GAI.fastq fastq (reads) 266.8 MB
ENCFF146ZKF.bigBed bigBed (peaks) 4.5 MB
ENCFF160MZO.bam bam (alignments) 366.0 MB
ENCFF165ISL.bigWig bigWig (plus strand signal of unique reads) 16.4 MB
ENCFF175VJO.bed bed (peaks) 1.7 MB
ENCFF219ZDF.bigBed bigBed (peaks) 2.5 MB
ENCFF225WNJ.bigBed bigBed (peaks) 599.7 KB
ENCFF243EVT.bigWig bigWig (plus strand signal of unique reads) 23.5 MB
ENCFF268GTW.bigBed bigBed (peaks) 1.5 MB
ENCFF324IMR.bigWig bigWig (minus strand signal of unique reads) 21.9 MB
ENCFF429MCF.bigWig bigWig (plus strand signal of unique reads) 16.4 MB
ENCFF433NXX.bigWig bigWig (minus strand signal of unique reads) 22.0 MB
ENCFF448EIC.bigBed bigBed (peaks) 3.3 MB
ENCFF450IJF.bam bam (alignments) 204.7 MB
ENCFF457CJG.bigBed bigBed (peaks) 2.9 MB
ENCFF501TRY.bed bed (peaks) 2.4 MB
ENCFF503KDE.fastq fastq (reads) 287.1 MB
ENCFF504DZY.bigBed bigBed (peaks) 3.3 MB
ENCFF524HTN.bigBed bigBed (peaks) 575.5 KB
ENCFF542FRX.bed bed (peaks) 1.7 MB
ENCFF600EOC.fastq fastq (reads) 269.5 MB
ENCFF633FLY.bam bam (alignments) 203.0 MB
ENCFF705MCO.bigWig bigWig (minus strand signal of unique reads) 15.6 MB
ENCFF746CAJ.bed bed (peaks) 259.6 KB
ENCFF752JNY.bed bed (peaks) 272.1 KB
ENCFF758BBB.bigWig bigWig (minus strand signal of unique reads) 15.5 MB
ENCFF776VVS.bigBed bigBed (peaks) 1.2 MB
ENCFF817WMP.fastq fastq (reads) 292.4 MB
ENCFF878JOG.bed bed (peaks) 267.9 KB
ENCFF950RRY.bam bam (alignments) 362.6 MB
ENCFF987WZB.bed bed (peaks) 655.4 KB
ENCSR062NNB ENCSR via encode_api

eCLIP experiment on K562 against IGF2BP2

Homo sapiens
36 data files
FileTypeSize
ENCFF036HZN.bigBed bigBed (peaks) 992.5 KB
ENCFF082VUD.bed bed (peaks) 1.2 MB
ENCFF163DKK.bigWig bigWig (plus strand signal of unique reads) 11.1 MB
ENCFF185MFP.bed bed (peaks) 441.0 KB
ENCFF205TRW.bigBed bigBed (peaks) 2.4 MB
ENCFF264QIH.bigWig bigWig (plus strand signal of unique reads) 15.3 MB
ENCFF307AUO.fastq fastq (reads) 202.2 MB
ENCFF329EES.bigBed bigBed (peaks) 1.0 MB
ENCFF343SYH.bigBed bigBed (peaks) 3.9 MB
ENCFF343XCK.bed bed (peaks) 1.1 MB
ENCFF387BGM.bigBed bigBed (peaks) 2.4 MB
ENCFF414ZGV.bigBed bigBed (peaks) 2.2 MB
ENCFF416JIV.bigBed bigBed (peaks) 2.8 MB
ENCFF418NBV.fastq fastq (reads) 261.8 MB
ENCFF434VQE.bigWig bigWig (minus strand signal of unique reads) 10.6 MB
ENCFF446VVE.bam bam (alignments) 253.0 MB
ENCFF512QJT.bed bed (peaks) 1.4 MB
ENCFF524ZZB.bed bed (peaks) 88.9 KB
ENCFF543CKG.bed bed (peaks) 1.0 MB
ENCFF563WIX.fastq fastq (reads) 215.2 MB
ENCFF589JKO.bam bam (alignments) 189.6 MB
ENCFF616DQY.bigWig bigWig (plus strand signal of unique reads) 15.4 MB
ENCFF620LDH.bigBed bigBed (peaks) 2.0 MB
ENCFF631HDI.bigWig bigWig (plus strand signal of unique reads) 11.0 MB
ENCFF643OXD.fastq fastq (reads) 250.3 MB
ENCFF719CCI.bam bam (alignments) 191.8 MB
ENCFF742LFS.bigWig bigWig (minus strand signal of unique reads) 10.6 MB
ENCFF808IWD.bigWig bigWig (minus strand signal of unique reads) 14.7 MB
ENCFF832TMO.bigBed bigBed (peaks) 4.2 MB
ENCFF904VAH.bam bam (alignments) 250.3 MB
ENCFF922ZNQ.bigBed bigBed (peaks) 2.8 MB
ENCFF968WTB.bed bed (peaks) 1.2 MB
ENCFF976XUG.bed bed (peaks) 475.7 KB
ENCFF977MKB.bed bed (peaks) 88.3 KB
ENCFF988HSD.bed bed (peaks) 1.5 MB
ENCFF995HCK.bigWig bigWig (minus strand signal of unique reads) 14.7 MB
ENCSR438NCK ENCSR via encode_api

eCLIP control experiment on HepG2 against PTBP1

Homo sapiens
8 data files
FileTypeSize
ENCFF136NZL.bigWig bigWig (minus strand signal of unique reads) 21.5 MB
ENCFF302OCV.bigWig bigWig (plus strand signal of unique reads) 21.8 MB
ENCFF476HFB.bigWig bigWig (minus strand signal of unique reads) 22.0 MB
ENCFF556EQK.bigWig bigWig (plus strand signal of unique reads) 22.3 MB
ENCFF583UFX.fastq fastq (reads) 501.0 MB
ENCFF585EFC.fastq fastq (reads) 531.6 MB
ENCFF603FCS.bam bam (alignments) 495.0 MB
ENCFF895BNM.bam bam (alignments) 507.0 MB
ENCSR859PUB ENCSR via encode_api

eCLIP control experiment on HepG2 against SF3A3

Homo sapiens
8 data files
FileTypeSize
ENCFF029QFY.bigWig bigWig (minus strand signal of unique reads) 30.4 MB
ENCFF037LUF.bam bam (alignments) 733.3 MB
ENCFF060XZQ.bigWig bigWig (minus strand signal of unique reads) 31.1 MB
ENCFF068IUX.bigWig bigWig (plus strand signal of unique reads) 31.2 MB
ENCFF337AFM.fastq fastq (reads) 784.4 MB
ENCFF370RMU.fastq fastq (reads) 697.7 MB
ENCFF514RHC.bam bam (alignments) 718.9 MB
ENCFF542KNE.bigWig bigWig (plus strand signal of unique reads) 31.9 MB
ENCSR487EUV ENCSR via encode_api

eCLIP control experiment on K562 against NONO

Homo sapiens
8 data files
FileTypeSize
ENCFF046AJZ.bigWig bigWig (minus strand signal of unique reads) 19.5 MB
ENCFF187ARS.bigWig bigWig (plus strand signal of unique reads) 20.5 MB
ENCFF347ECS.bam bam (alignments) 438.1 MB
ENCFF399ONM.fastq fastq (reads) 577.4 MB
ENCFF421XRO.bigWig bigWig (minus strand signal of unique reads) 19.9 MB
ENCFF608XVX.fastq fastq (reads) 518.1 MB
ENCFF627ZLQ.bigWig bigWig (plus strand signal of unique reads) 20.2 MB
ENCFF701APQ.bam bam (alignments) 445.0 MB
ENCSR812PBU ENCSR via encode_api

eCLIP control experiment on K562 against YWHAG

Homo sapiens
8 data files
FileTypeSize
ENCFF101JTN.fastq fastq (reads) 434.3 MB
ENCFF114ELO.bam bam (alignments) 180.8 MB
ENCFF164MAC.bigWig bigWig (plus strand signal of unique reads) 8.0 MB
ENCFF350QSA.bigWig bigWig (minus strand signal of unique reads) 7.6 MB
ENCFF481AIY.bam bam (alignments) 180.3 MB
ENCFF661RIY.fastq fastq (reads) 481.6 MB
ENCFF799UBV.bigWig bigWig (plus strand signal of unique reads) 7.9 MB
ENCFF880JXN.bigWig bigWig (minus strand signal of unique reads) 7.7 MB
ENCSR451HMR ENCSR via encode_api

eCLIP control experiment on HepG2 against GTF2F1

Homo sapiens
8 data files
FileTypeSize
ENCFF017TUA.bigWig bigWig (plus strand signal of unique reads) 18.9 MB
ENCFF251NBU.fastq fastq (reads) 432.3 MB
ENCFF435UZZ.bam bam (alignments) 389.2 MB
ENCFF595TEO.fastq fastq (reads) 479.9 MB
ENCFF622JFU.bigWig bigWig (minus strand signal of unique reads) 18.5 MB
ENCFF764PHQ.bigWig bigWig (minus strand signal of unique reads) 18.2 MB
ENCFF946KUV.bigWig bigWig (plus strand signal of unique reads) 18.6 MB
ENCFF962TBZ.bam bam (alignments) 396.3 MB
ENCSR090VXV ENCSR via encode_api

eCLIP control experiment on HepG2 against DDX3X

Homo sapiens
8 data files
FileTypeSize
ENCFF027JWE.bigWig bigWig (plus strand signal of unique reads) 32.1 MB
ENCFF060CDK.fastq fastq (reads) 846.1 MB
ENCFF077GQW.bigWig bigWig (minus strand signal of unique reads) 32.3 MB
ENCFF220JYP.fastq fastq (reads) 765.8 MB
ENCFF240BQV.bigWig bigWig (minus strand signal of unique reads) 31.3 MB
ENCFF440HUP.bam bam (alignments) 710.1 MB
ENCFF825RZR.bigWig bigWig (plus strand signal of unique reads) 33.1 MB
ENCFF887TNO.bam bam (alignments) 725.6 MB
ENCSR095SIV ENCSR via encode_api

eCLIP control experiment on HepG2 against LARP7

Homo sapiens
8 data files
FileTypeSize
ENCFF015FBQ.bam bam (alignments) 262.3 MB
ENCFF029VYS.fastq fastq (reads) 394.8 MB
ENCFF076AKR.fastq fastq (reads) 397.7 MB
ENCFF240QBZ.bam bam (alignments) 263.5 MB
ENCFF549AEN.bigWig bigWig (minus strand signal of unique reads) 12.5 MB
ENCFF590KYU.bigWig bigWig (plus strand signal of unique reads) 13.0 MB
ENCFF792STI.bigWig bigWig (plus strand signal of unique reads) 13.0 MB
ENCFF799FGP.bigWig bigWig (minus strand signal of unique reads) 12.5 MB
ENCSR482AWB ENCSR via encode_api

eCLIP control experiment on K562 against HNRNPUL1

Homo sapiens
8 data files
FileTypeSize
ENCFF019BLW.bam bam (alignments) 261.8 MB
ENCFF124ADY.bigWig bigWig (plus strand signal of unique reads) 14.3 MB
ENCFF129UTE.fastq fastq (reads) 428.5 MB
ENCFF207FLE.fastq fastq (reads) 410.0 MB
ENCFF388XMR.bigWig bigWig (plus strand signal of unique reads) 14.5 MB
ENCFF595REQ.bigWig bigWig (minus strand signal of unique reads) 13.7 MB
ENCFF617UQT.bigWig bigWig (minus strand signal of unique reads) 13.9 MB
ENCFF868UQK.bam bam (alignments) 259.4 MB
ENCSR760SFB ENCSR via encode_api

eCLIP control experiment on K562 against ILF3

Homo sapiens
8 data files
FileTypeSize
ENCFF184AQO.bam bam (alignments) 497.1 MB
ENCFF495ZOZ.fastq fastq (reads) 532.4 MB
ENCFF535YZW.fastq fastq (reads) 531.2 MB
ENCFF556NKL.bigWig bigWig (minus strand signal of unique reads) 22.1 MB
ENCFF629QUA.bigWig bigWig (plus strand signal of unique reads) 22.9 MB
ENCFF715OWV.bam bam (alignments) 495.5 MB
ENCFF753HRL.bigWig bigWig (minus strand signal of unique reads) 22.2 MB
ENCFF900PEG.bigWig bigWig (plus strand signal of unique reads) 23.0 MB
ENCSR456ASB ENCSR via encode_api

eCLIP experiment on K562 against UPF1

Homo sapiens
36 data files
FileTypeSize
ENCFF053DWE.bigBed bigBed (peaks) 2.7 MB
ENCFF107ESG.bigBed bigBed (peaks) 2.7 MB
ENCFF119DJS.bam bam (alignments) 261.8 MB
ENCFF170KCT.fastq fastq (reads) 355.0 MB
ENCFF174FBV.bam bam (alignments) 311.4 MB
ENCFF299YME.bigBed bigBed (peaks) 2.2 MB
ENCFF346DUT.bigBed bigBed (peaks) 2.8 MB
ENCFF373CCG.bed bed (peaks) 864.6 KB
ENCFF425NCO.fastq fastq (reads) 360.6 MB
ENCFF433CWN.bigWig bigWig (minus strand signal of unique reads) 15.4 MB
ENCFF466HWF.fastq fastq (reads) 367.7 MB
ENCFF493EKO.fastq fastq (reads) 362.4 MB
ENCFF518MSP.bed bed (peaks) 1.1 MB
ENCFF597NVR.bed bed (peaks) 315.8 KB
ENCFF668YCA.bed bed (peaks) 375.7 KB
ENCFF679ADZ.bigWig bigWig (minus strand signal of unique reads) 15.7 MB
ENCFF684MFT.bigWig bigWig (plus strand signal of unique reads) 16.0 MB
ENCFF696ORH.bigWig bigWig (plus strand signal of unique reads) 13.8 MB
ENCFF701TPG.bam bam (alignments) 300.6 MB
ENCFF707BGL.bed bed (peaks) 1.4 MB
ENCFF740ACZ.bigBed bigBed (peaks) 1.9 MB
ENCFF792HYY.bed bed (peaks) 1.4 MB
ENCFF799UKK.bed bed (peaks) 385.9 KB
ENCFF814JGE.bed bed (peaks) 317.3 KB
ENCFF847ILS.bed bed (peaks) 890.0 KB
ENCFF855FDZ.bigBed bigBed (peaks) 2.9 MB
ENCFF873FZT.bed bed (peaks) 1.2 MB
ENCFF892KAG.bigWig bigWig (minus strand signal of unique reads) 13.5 MB
ENCFF892NTJ.bigBed bigBed (peaks) 914.4 KB
ENCFF911ITL.bigBed bigBed (peaks) 2.2 MB
ENCFF935WLO.bigWig bigWig (plus strand signal of unique reads) 16.4 MB
ENCFF948AOR.bam bam (alignments) 247.2 MB
ENCFF964TKW.bigWig bigWig (minus strand signal of unique reads) 13.1 MB
ENCFF971UYV.bigBed bigBed (peaks) 1.9 MB
ENCFF985USP.bigBed bigBed (peaks) 925.7 KB
ENCFF992STI.bigWig bigWig (plus strand signal of unique reads) 14.3 MB
ENCSR671FKF ENCSR via encode_api

eCLIP control experiment on HepG2 against FASTKD2

Homo sapiens
8 data files
FileTypeSize
ENCFF189FJO.fastq fastq (reads) 923.1 MB
ENCFF202HGO.fastq fastq (reads) 846.0 MB
ENCFF217NZS.bam bam (alignments) 736.2 MB
ENCFF363UTN.bigWig bigWig (minus strand signal of unique reads) 31.6 MB
ENCFF526MAE.bigWig bigWig (plus strand signal of unique reads) 32.2 MB
ENCFF585BNE.bam bam (alignments) 745.2 MB
ENCFF719RVW.bigWig bigWig (plus strand signal of unique reads) 32.5 MB
ENCFF843QTA.bigWig bigWig (minus strand signal of unique reads) 32.0 MB
ENCSR583KVR ENCSR via encode_api

eCLIP control experiment on HepG2 against XPO5

Homo sapiens
8 data files
FileTypeSize
ENCFF039AMW.bam bam (alignments) 758.7 MB
ENCFF161GQY.fastq fastq (reads) 857.3 MB
ENCFF311IKR.bigWig bigWig (minus strand signal of unique reads) 33.9 MB
ENCFF351CZY.bigWig bigWig (plus strand signal of unique reads) 34.8 MB
ENCFF491CRL.fastq fastq (reads) 783.0 MB
ENCFF525ZJX.bigWig bigWig (plus strand signal of unique reads) 34.5 MB
ENCFF842ISA.bigWig bigWig (minus strand signal of unique reads) 34.6 MB
ENCFF986QCU.bam bam (alignments) 766.8 MB
ENCSR393STP ENCSR via encode_api

eCLIP control experiment on K562 against GPKOW

Homo sapiens
8 data files
FileTypeSize
ENCFF159YLX.bigWig bigWig (plus strand signal of unique reads) 32.1 MB
ENCFF216XJZ.fastq fastq (reads) 807.5 MB
ENCFF333OLY.bam bam (alignments) 747.1 MB
ENCFF365XIH.bigWig bigWig (minus strand signal of unique reads) 31.1 MB
ENCFF405MAR.bigWig bigWig (minus strand signal of unique reads) 31.9 MB
ENCFF438MJE.bigWig bigWig (plus strand signal of unique reads) 32.9 MB
ENCFF821KVN.fastq fastq (reads) 903.4 MB
ENCFF914HZF.bam bam (alignments) 728.8 MB
ENCSR496UBM ENCSR via encode_api

eCLIP control experiment on K562 against SF3B1

Homo sapiens
8 data files
FileTypeSize
ENCFF077NTL.bigWig bigWig (plus strand signal of unique reads) 50.4 MB
ENCFF185ZHX.fastq fastq (reads) 963.4 MB
ENCFF212RSI.bigWig bigWig (minus strand signal of unique reads) 48.9 MB
ENCFF231PYQ.fastq fastq (reads) 1009.1 MB
ENCFF293CBE.bigWig bigWig (plus strand signal of unique reads) 49.3 MB
ENCFF359HHB.bam bam (alignments) 1.1 GB
ENCFF865PNX.bam bam (alignments) 1.1 GB
ENCFF874XJB.bigWig bigWig (minus strand signal of unique reads) 47.9 MB
ENCSR051IXX ENCSR via encode_api

eCLIP control experiment on K562 against RBFOX2

Homo sapiens
8 data files
FileTypeSize
ENCFF045FUV.bam bam (alignments) 446.8 MB
ENCFF196XJX.bigWig bigWig (plus strand signal of unique reads) 22.1 MB
ENCFF212IIR.bam bam (alignments) 452.9 MB
ENCFF217IRF.bigWig bigWig (minus strand signal of unique reads) 21.2 MB
ENCFF290PDJ.bigWig bigWig (plus strand signal of unique reads) 22.7 MB
ENCFF421XME.bigWig bigWig (minus strand signal of unique reads) 21.6 MB
ENCFF492QZU.fastq fastq (reads) 538.0 MB
ENCFF495WQA.fastq fastq (reads) 582.4 MB
ENCSR565KBR ENCSR via encode_api

eCLIP control experiment on HepG2 against PRPF8

Homo sapiens
8 data files
FileTypeSize
ENCFF025IVF.fastq fastq (reads) 621.4 MB
ENCFF492ZTF.bigWig bigWig (plus strand signal of unique reads) 27.8 MB
ENCFF728TGZ.bigWig bigWig (plus strand signal of unique reads) 35.5 MB
ENCFF740ZOK.bigWig bigWig (minus strand signal of unique reads) 34.3 MB
ENCFF818CAZ.bam bam (alignments) 631.5 MB
ENCFF849APG.bam bam (alignments) 627.5 MB
ENCFF974FWQ.bigWig bigWig (minus strand signal of unique reads) 26.9 MB
ENCFF998PYJ.fastq fastq (reads) 647.2 MB
ENCSR347MVO ENCSR via encode_api

eCLIP control experiment on K562 against GEMIN5

Homo sapiens
8 data files
FileTypeSize
ENCFF064TEN.fastq fastq (reads) 961.7 MB
ENCFF088VVN.bigWig bigWig (minus strand signal of unique reads) 50.0 MB
ENCFF303VEV.bigWig bigWig (plus strand signal of unique reads) 51.8 MB
ENCFF369PJK.bigWig bigWig (plus strand signal of unique reads) 52.4 MB
ENCFF381NWX.fastq fastq (reads) 867.0 MB
ENCFF477FDK.bigWig bigWig (minus strand signal of unique reads) 50.6 MB
ENCFF605CQT.bam bam (alignments) 1.1 GB
ENCFF945AUF.bam bam (alignments) 1.1 GB
ENCSR151MPZ ENCSR via encode_api

eCLIP control experiment on HepG2 against DHX30

Homo sapiens
8 data files
FileTypeSize
ENCFF009FAU.bigWig bigWig (minus strand signal of unique reads) 38.4 MB
ENCFF238WUM.bigWig bigWig (plus strand signal of unique reads) 38.8 MB
ENCFF298MZM.bigWig bigWig (plus strand signal of unique reads) 38.4 MB
ENCFF336UXX.bam bam (alignments) 856.3 MB
ENCFF342RNA.fastq fastq (reads) 708.4 MB
ENCFF360QCS.bigWig bigWig (minus strand signal of unique reads) 37.9 MB
ENCFF552GHW.bam bam (alignments) 846.4 MB
ENCFF618ASS.fastq fastq (reads) 802.5 MB
ENCSR544CTM ENCSR via encode_api

eCLIP control experiment on HepG2 against TRA2A

Homo sapiens
8 data files
FileTypeSize
ENCFF084UZN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.0 MB
ENCFF411KJR.fastq fastq (reads) 204.3 MB
ENCFF413FAM.bam bam (alignments); assembly: hg19 173.4 MB
ENCFF457YDW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 9.0 MB
ENCFF541PUE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 8.9 MB
ENCFF655QGU.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.1 MB
ENCFF867ISO.bam bam (alignments); assembly: GRCh38 174.2 MB
ENCFF976JEU.fastq fastq (reads) 211.3 MB
ENCSR161TFX ENCSR via encode_api

eCLIP control experiment on HepG2 against UCHL5

Homo sapiens
8 data files
FileTypeSize
ENCFF097ZFW.bigWig bigWig (minus strand signal of unique reads) 12.4 MB
ENCFF111HFT.bigWig bigWig (minus strand signal of unique reads) 12.1 MB
ENCFF136NDS.bigWig bigWig (plus strand signal of unique reads) 12.3 MB
ENCFF151VWF.bam bam (alignments) 247.0 MB
ENCFF196BNM.fastq fastq (reads) 327.8 MB
ENCFF269WBT.fastq fastq (reads) 313.4 MB
ENCFF352SQG.bam bam (alignments) 241.2 MB
ENCFF471HMV.bigWig bigWig (plus strand signal of unique reads) 12.7 MB
ENCSR828NSY ENCSR via encode_api

eCLIP control experiment on K562 against DROSHA

Homo sapiens
8 data files
FileTypeSize
ENCFF004HVL.fastq fastq (reads) 1011.6 MB
ENCFF017ANQ.bigWig bigWig (plus strand signal of unique reads) 47.5 MB
ENCFF018AVT.fastq fastq (reads) 1.0 GB
ENCFF059NAB.bam bam (alignments) 1.1 GB
ENCFF586XSP.bigWig bigWig (plus strand signal of unique reads) 49.4 MB
ENCFF826DXS.bam bam (alignments) 1.1 GB
ENCFF849CSH.bigWig bigWig (minus strand signal of unique reads) 46.2 MB
ENCFF928XCJ.bigWig bigWig (minus strand signal of unique reads) 48.0 MB
ENCSR006OEQ ENCSR via encode_api

eCLIP experiment on K562 against FAM120A

Homo sapiens
35 data files
FileTypeSize
ENCFF016RWW.bed bed (peaks); assembly: GRCh38 1.6 MB
ENCFF080JDD.bed bed (peaks); assembly: hg19 668.6 KB
ENCFF086NQQ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 20.9 MB
ENCFF094VBR.fastq fastq (reads) 355.0 MB
ENCFF116XFB.bigBed bigBed (peaks); assembly: GRCh38 3.0 MB
ENCFF144SGR.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 12.0 MB
ENCFF150KMB.bed bed (peaks); assembly: hg19 913.1 KB
ENCFF158AOV.bed bed (peaks); assembly: GRCh38 135.6 KB
ENCFF161DFB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.1 MB
ENCFF170VKG.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 11.7 MB
ENCFF184QYU.bam bam (alignments); assembly: GRCh38 170.9 MB
ENCFF188HFB.bed bed (peaks); assembly: GRCh38 946.1 KB
ENCFF220URC.bigBed bigBed (peaks); assembly: hg19 1.8 MB
ENCFF225RJI.bam bam (alignments); assembly: hg19 166.7 MB
ENCFF248TVU.bigBed bigBed (peaks); assembly: GRCh38 671.6 KB
ENCFF274QOR.bed bed (peaks); assembly: GRCh38 391.4 KB
ENCFF316AVY.bed bed (peaks); assembly: GRCh38 287.3 KB
ENCFF318HXI.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 11.4 MB
ENCFF352HXC.fastq fastq (reads) 318.7 MB
ENCFF353KNB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 20.0 MB
ENCFF368MXJ.bed bed (peaks); assembly: hg19 131.6 KB
ENCFF379MQJ.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 12.2 MB
ENCFF453EIG.bigBed bigBed (peaks); assembly: hg19 3.1 MB
ENCFF493YGV.bed bed (peaks); assembly: hg19 940.1 KB
ENCFF499ZKI.bam bam (alignments); assembly: GRCh38 388.3 MB
ENCFF611WPA.bigBed bigBed (peaks); assembly: hg19 2.1 MB
ENCFF668AFD.bam bam (alignments); assembly: hg19 391.9 MB
ENCFF820TME.fastq fastq (reads) 418.9 MB
ENCFF874PCG.fastq fastq (reads) 374.3 MB
ENCFF900RQG.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF901AAL.bed bed (peaks); assembly: hg19 1.6 MB
ENCFF905XHS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 21.1 MB
ENCFF973OEK.bigBed bigBed (peaks); assembly: hg19 3.0 MB
ENCFF976BSP.bigBed bigBed (peaks); assembly: GRCh38 963.9 KB
ENCFF984DLZ.bigBed bigBed (peaks); assembly: GRCh38 1.9 MB
ENCSR135VMS ENCSR via encode_api

eCLIP experiment on HepG2 against LSM11

Homo sapiens
36 data files
FileTypeSize
ENCFF004CIG.fastq fastq (reads) 579.8 MB
ENCFF005DOM.bigWig bigWig (minus strand signal of unique reads) 27.2 MB
ENCFF042LCL.bed bed (peaks) 356.4 KB
ENCFF055MTP.bam bam (alignments) 393.0 MB
ENCFF066ALT.bigBed bigBed (peaks) 3.7 MB
ENCFF078QXW.bigBed bigBed (peaks) 2.0 MB
ENCFF082LOD.bigWig bigWig (plus strand signal of unique reads) 27.4 MB
ENCFF082MII.bigWig bigWig (minus strand signal of unique reads) 18.4 MB
ENCFF088YQX.bigWig bigWig (plus strand signal of unique reads) 20.0 MB
ENCFF117KLF.bigBed bigBed (peaks) 4.8 MB
ENCFF220ECM.bed bed (peaks) 2.5 MB
ENCFF229GCX.bam bam (alignments) 626.7 MB
ENCFF252SPM.bam bam (alignments) 605.0 MB
ENCFF280DYY.bigBed bigBed (peaks) 1.8 MB
ENCFF291ZAB.bigBed bigBed (peaks) 3.7 MB
ENCFF294QOA.bigBed bigBed (peaks) 814.2 KB
ENCFF307ODB.bigBed bigBed (peaks) 3.7 MB
ENCFF322HSE.bigWig bigWig (minus strand signal of unique reads) 19.0 MB
ENCFF407UHQ.fastq fastq (reads) 657.3 MB
ENCFF443NQT.bam bam (alignments) 411.0 MB
ENCFF453KFP.fastq fastq (reads) 689.6 MB
ENCFF482BDD.bed bed (peaks) 915.8 KB
ENCFF485KSY.bed bed (peaks) 295.4 KB
ENCFF549LQW.bigBed bigBed (peaks) 3.0 MB
ENCFF581BHC.bed bed (peaks) 1.8 MB
ENCFF625DWV.bigBed bigBed (peaks) 4.8 MB
ENCFF637JMJ.bed bed (peaks) 55.1 KB
ENCFF754DEC.fastq fastq (reads) 613.1 MB
ENCFF782KQY.bigWig bigWig (plus strand signal of unique reads) 28.4 MB
ENCFF814SQP.bigWig bigWig (plus strand signal of unique reads) 19.2 MB
ENCFF815COD.bigWig bigWig (minus strand signal of unique reads) 26.5 MB
ENCFF825AVT.bed bed (peaks) 2.5 MB
ENCFF870HZF.bed bed (peaks) 1.9 MB
ENCFF922GMC.bed bed (peaks) 1.0 MB
ENCFF948HKJ.bigBed bigBed (peaks) 734.8 KB
ENCFF985ECA.bed bed (peaks) 55.6 KB
ENCSR647CLF ENCSR via encode_api

eCLIP experiment on K562 against GPKOW

Homo sapiens
34 data files
FileTypeSize
ENCFF040AJT.bed bed (peaks) 1.2 MB
ENCFF041SQT.bigBed bigBed (peaks) 529.5 KB
ENCFF054KNB.bigWig bigWig (minus strand signal of unique reads) 7.8 MB
ENCFF062JEH.fastq fastq (reads) 559.5 MB
ENCFF085PPS.fastq fastq (reads) 561.9 MB
ENCFF106AHH.bigBed bigBed (peaks) 2.2 MB
ENCFF135NMM.bigWig bigWig (minus strand signal of unique reads) 9.2 MB
ENCFF173GMF.bigWig bigWig (minus strand signal of unique reads) 9.1 MB
ENCFF186VGW.bigWig bigWig (plus strand signal of unique reads) 9.5 MB
ENCFF266IDC.bigWig bigWig (plus strand signal of unique reads) 9.4 MB
ENCFF318RDQ.bed bed (peaks) 1.3 MB
ENCFF342WGR.bigWig bigWig (plus strand signal of unique reads) 8.1 MB
ENCFF357GNY.fastq fastq (reads) 591.5 MB
ENCFF365GGV.bigBed bigBed (peaks) 415.3 KB
ENCFF368UWH.bigBed bigBed (peaks) 1.2 MB
ENCFF400PVK.bam bam (alignments) 165.2 MB
ENCFF410KNT.bed bed (peaks) 1.3 MB
ENCFF512KJQ.bigWig bigWig (plus strand signal of unique reads) 7.9 MB
ENCFF528XXE.bed bed (peaks) 572.1 KB
ENCFF618LHX.bigBed bigBed (peaks) 2.0 MB
ENCFF636IYL.bam bam (alignments) 194.8 MB
ENCFF674BUM.bed bed (peaks) 23.5 KB
ENCFF739BZK.bam bam (alignments) 161.1 MB
ENCFF760JZI.bed bed (peaks) 1.2 MB
ENCFF776RIX.fastq fastq (reads) 586.5 MB
ENCFF809WWV.bigWig bigWig (minus strand signal of unique reads) 7.6 MB
ENCFF865VDH.bigBed bigBed (peaks) 2.2 MB
ENCFF889CCS.bed bed (peaks) 24.6 KB
ENCFF915OVW.bigBed bigBed (peaks) 1.1 MB
ENCFF930UJF.bed bed (peaks) 626.7 KB
ENCFF941QIF.bigBed bigBed (peaks) 2.0 MB
ENCFF949AWE.bed bed (peaks) 217.2 KB
ENCFF966HIC.bam bam (alignments) 190.7 MB
ENCFF982XZC.bed bed (peaks) 196.8 KB
ENCSR660VTT ENCSR via encode_api

eCLIP control experiment on K562 against YBX3

Homo sapiens
8 data files
FileTypeSize
ENCFF035HRR.fastq fastq (reads) 692.1 MB
ENCFF131CGH.fastq fastq (reads) 691.8 MB
ENCFF274LIF.bigWig bigWig (plus strand signal of unique reads) 18.5 MB
ENCFF329IEX.bigWig bigWig (plus strand signal of unique reads) 19.1 MB
ENCFF338RSM.bigWig bigWig (minus strand signal of unique reads) 17.8 MB
ENCFF405CXK.bam bam (alignments) 412.8 MB
ENCFF409LAD.bam bam (alignments) 421.1 MB
ENCFF787CHX.bigWig bigWig (minus strand signal of unique reads) 18.2 MB
ENCSR059CWF ENCSR via encode_api

eCLIP experiment on K562 against SBDS

Homo sapiens
36 data files
FileTypeSize
ENCFF034VQL.bed bed (peaks) 94.2 KB
ENCFF051EEW.bed bed (peaks) 666.0 B
ENCFF054MDY.bigBed bigBed (peaks) 199.0 KB
ENCFF060XOS.bigWig bigWig (plus strand signal of unique reads) 2.6 MB
ENCFF061LXG.bigBed bigBed (peaks) 566.4 KB
ENCFF105PMR.bed bed (peaks) 378.0 B
ENCFF114WDK.fastq fastq (reads) 163.2 MB
ENCFF141SNV.bigWig bigWig (minus strand signal of unique reads) 3.1 MB
ENCFF175EIG.bed bed (peaks) 103.6 KB
ENCFF178CDC.bigBed bigBed (peaks) 274.1 KB
ENCFF281FSP.bam bam (alignments) 38.6 MB
ENCFF306DPG.bigWig bigWig (minus strand signal of unique reads) 2.6 MB
ENCFF322GTP.bigWig bigWig (minus strand signal of unique reads) 3.2 MB
ENCFF384NHH.bed bed (peaks) 127.9 KB
ENCFF385QVY.fastq fastq (reads) 163.4 MB
ENCFF413LUN.bigWig bigWig (plus strand signal of unique reads) 2.7 MB
ENCFF450LWH.bed bed (peaks) 96.1 KB
ENCFF516DYB.bed bed (peaks) 44.0 KB
ENCFF523LSW.fastq fastq (reads) 209.1 MB
ENCFF528DQU.bigBed bigBed (peaks) 473.1 KB
ENCFF615BWP.bigBed bigBed (peaks) 352.2 KB
ENCFF624FKF.bigBed bigBed (peaks) 300.1 KB
ENCFF635ASG.bam bam (alignments) 55.3 MB
ENCFF679UNR.bigWig bigWig (plus strand signal of unique reads) 3.4 MB
ENCFF743TGI.bed bed (peaks) 111.5 KB
ENCFF797RAY.bigBed bigBed (peaks) 184.6 KB
ENCFF820TYZ.bigBed bigBed (peaks) 283.5 KB
ENCFF840JWJ.bam bam (alignments) 57.7 MB
ENCFF873TSY.bed bed (peaks) 134.2 KB
ENCFF891WAN.bigBed bigBed (peaks) 304.8 KB
ENCFF926NDE.bed bed (peaks) 49.3 KB
ENCFF932LRA.fastq fastq (reads) 214.3 MB
ENCFF937KCE.bigWig bigWig (minus strand signal of unique reads) 2.5 MB
ENCFF943MLE.bigBed bigBed (peaks) 284.8 KB
ENCFF945CZJ.bigWig bigWig (plus strand signal of unique reads) 3.3 MB
ENCFF974XMI.bam bam (alignments) 41.2 MB
ENCSR349KMG ENCSR via encode_api

eCLIP experiment on K562 against UCHL5

Homo sapiens
34 data files
FileTypeSize
ENCFF016BUJ.bigWig bigWig (minus strand signal of unique reads) 24.3 MB
ENCFF039HDD.bigBed bigBed (peaks) 1013.2 KB
ENCFF063RZA.bigWig bigWig (minus strand signal of unique reads) 24.8 MB
ENCFF096AKL.fastq fastq (reads) 871.7 MB
ENCFF155EKG.fastq fastq (reads) 1.5 GB
ENCFF216ICY.bigWig bigWig (plus strand signal of unique reads) 25.1 MB
ENCFF268DRH.bed bed (peaks) 1.6 MB
ENCFF357UDV.bed bed (peaks) 2.6 MB
ENCFF365LFU.bed bed (peaks) 414.8 KB
ENCFF374PBK.bed bed (peaks) 402.5 KB
ENCFF424LXL.bigBed bigBed (peaks) 1.1 MB
ENCFF463FXX.bigBed bigBed (peaks) 4.9 MB
ENCFF483AGC.bigWig bigWig (plus strand signal of unique reads) 32.8 MB
ENCFF488QYF.bam bam (alignments) 692.4 MB
ENCFF488WVE.bed bed (peaks) 538.7 KB
ENCFF491PCQ.bed bed (peaks) 1.3 MB
ENCFF601KRU.bigBed bigBed (peaks) 2.6 MB
ENCFF618PQG.bigWig bigWig (minus strand signal of unique reads) 31.4 MB
ENCFF660XGG.bed bed (peaks) 3.2 MB
ENCFF681XDL.bigWig bigWig (plus strand signal of unique reads) 32.4 MB
ENCFF713NFZ.bed bed (peaks) 2.6 MB
ENCFF764QNQ.bed bed (peaks) 450.5 KB
ENCFF787FER.fastq fastq (reads) 811.8 MB
ENCFF807WFX.fastq fastq (reads) 1.4 GB
ENCFF835BLS.bigWig bigWig (minus strand signal of unique reads) 31.7 MB
ENCFF854UKV.bigBed bigBed (peaks) 6.0 MB
ENCFF874RGW.bigWig bigWig (plus strand signal of unique reads) 25.7 MB
ENCFF886YPC.bigBed bigBed (peaks) 3.7 MB
ENCFF903GDN.bam bam (alignments) 491.5 MB
ENCFF912GTJ.bed bed (peaks) 3.1 MB
ENCFF922LSS.bam bam (alignments) 499.7 MB
ENCFF952TJF.bam bam (alignments) 680.5 MB
ENCFF957MJB.bigBed bigBed (peaks) 5.9 MB
ENCFF968TYL.bigBed bigBed (peaks) 5.0 MB
ENCSR528HOM ENCSR via encode_api

eCLIP control experiment on K562 against ZRANB2

Homo sapiens
8 data files
FileTypeSize
ENCFF164CXV.bigWig bigWig (plus strand signal of unique reads) 15.9 MB
ENCFF215LAB.fastq fastq (reads) 589.6 MB
ENCFF291LRJ.bigWig bigWig (minus strand signal of unique reads) 15.6 MB
ENCFF464BYU.bigWig bigWig (minus strand signal of unique reads) 15.3 MB
ENCFF554SKU.fastq fastq (reads) 594.4 MB
ENCFF562FIX.bam bam (alignments) 341.2 MB
ENCFF824LSN.bam bam (alignments) 347.4 MB
ENCFF846GLP.bigWig bigWig (plus strand signal of unique reads) 16.2 MB
ENCSR943MHU ENCSR via encode_api

eCLIP experiment on K562 against SAFB2

Homo sapiens
36 data files
FileTypeSize
ENCFF005MGD.bigBed bigBed (peaks) 955.3 KB
ENCFF021GVX.bigBed bigBed (peaks) 6.1 MB
ENCFF022ERA.bigWig bigWig (plus strand signal of unique reads) 41.3 MB
ENCFF082JRS.fastq fastq (reads) 508.8 MB
ENCFF193UPY.bed bed (peaks) 78.0 KB
ENCFF273BVZ.bed bed (peaks) 3.4 MB
ENCFF331HKI.bed bed (peaks) 183.0 KB
ENCFF370VYY.bigBed bigBed (peaks) 5.9 MB
ENCFF402QLV.bam bam (alignments) 774.9 MB
ENCFF434KAR.bigBed bigBed (peaks) 441.3 KB
ENCFF488ZWQ.bam bam (alignments) 785.5 MB
ENCFF492OEQ.bigWig bigWig (plus strand signal of unique reads) 40.9 MB
ENCFF594EDV.bed bed (peaks) 79.2 KB
ENCFF598CPP.bigWig bigWig (minus strand signal of unique reads) 40.2 MB
ENCFF616SUL.bigBed bigBed (peaks) 1.9 MB
ENCFF646ISN.bigWig bigWig (minus strand signal of unique reads) 40.6 MB
ENCFF657TKX.bigBed bigBed (peaks) 5.9 MB
ENCFF663LQH.bam bam (alignments) 872.9 MB
ENCFF673QCY.bed bed (peaks) 551.8 KB
ENCFF686AAU.bigWig bigWig (plus strand signal of unique reads) 43.9 MB
ENCFF705VVX.bigWig bigWig (minus strand signal of unique reads) 42.9 MB
ENCFF734RGL.bam bam (alignments) 863.0 MB
ENCFF771CPV.bigBed bigBed (peaks) 541.2 KB
ENCFF782ZNC.bigBed bigBed (peaks) 6.1 MB
ENCFF801ARQ.bed bed (peaks) 3.3 MB
ENCFF818JEX.bigWig bigWig (plus strand signal of unique reads) 43.6 MB
ENCFF820EYG.fastq fastq (reads) 538.6 MB
ENCFF861YZK.bigBed bigBed (peaks) 1.2 MB
ENCFF871RJA.bed bed (peaks) 3.3 MB
ENCFF878YBB.fastq fastq (reads) 558.5 MB
ENCFF880FIG.bigWig bigWig (minus strand signal of unique reads) 43.2 MB
ENCFF893FMD.bed bed (peaks) 3.4 MB
ENCFF897VPQ.bed bed (peaks) 508.3 KB
ENCFF899HPH.fastq fastq (reads) 527.1 MB
ENCFF912PIY.bigBed bigBed (peaks) 1.8 MB
ENCFF921XQP.bed bed (peaks) 198.8 KB
ENCSR197INS ENCSR via encode_api

eCLIP experiment on K562 against PPIL4

Homo sapiens
35 data files
FileTypeSize
ENCFF004RVX.bigBed bigBed (peaks); assembly: GRCh38 382.7 KB
ENCFF028OXA.bigBed bigBed (peaks); assembly: hg19 4.4 MB
ENCFF036ZXE.bed bed (peaks); assembly: hg19 2.3 MB
ENCFF045ANJ.fastq fastq (reads) 586.8 MB
ENCFF178WNA.bigBed bigBed (peaks); assembly: GRCh38 2.8 MB
ENCFF179UGN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 21.9 MB
ENCFF188XKC.bed bed (peaks); assembly: hg19 1.8 MB
ENCFF194KZE.bam bam (alignments); assembly: hg19 567.2 MB
ENCFF220VDV.bed bed (peaks); assembly: GRCh38 2.3 MB
ENCFF234LRU.fastq fastq (reads) 442.8 MB
ENCFF277LUS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 26.5 MB
ENCFF326MGP.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 27.1 MB
ENCFF364OUY.bed bed (peaks); assembly: hg19 463.7 KB
ENCFF366XQT.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 21.2 MB
ENCFF387QWV.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 22.3 MB
ENCFF410EMT.bigBed bigBed (peaks); assembly: GRCh38 4.4 MB
ENCFF427FOO.fastq fastq (reads) 599.4 MB
ENCFF440PMK.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF486WMD.bigBed bigBed (peaks); assembly: hg19 2.4 MB
ENCFF507MHJ.bigBed bigBed (peaks); assembly: hg19 895.6 KB
ENCFF531JAB.bigBed bigBed (peaks); assembly: GRCh38 491.4 KB
ENCFF546EKR.bed bed (peaks); assembly: hg19 13.6 KB
ENCFF559HGK.bed bed (peaks); assembly: GRCh38 14.0 KB
ENCFF601IBB.bam bam (alignments); assembly: hg19 439.0 MB
ENCFF605SJT.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 25.8 MB
ENCFF646OBY.bed bed (peaks); assembly: hg19 660.7 KB
ENCFF648KRQ.bam bam (alignments); assembly: GRCh38 549.2 MB
ENCFF659VVA.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 26.3 MB
ENCFF669UKN.bed bed (peaks); assembly: GRCh38 145.9 KB
ENCFF727EPC.bigBed bigBed (peaks); assembly: hg19 2.8 MB
ENCFF777KZL.bed bed (peaks); assembly: GRCh38 212.0 KB
ENCFF823SYP.bam bam (alignments); assembly: GRCh38 425.7 MB
ENCFF854FTL.fastq fastq (reads) 452.2 MB
ENCFF926PKF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 21.6 MB
ENCFF987VIP.bed bed (peaks); assembly: GRCh38 1.8 MB
ENCSR867DSZ ENCSR via encode_api

eCLIP experiment on K562 against NPM1

Homo sapiens
35 data files
FileTypeSize
ENCFF013GRO.bed bed (peaks) 91.2 KB
ENCFF092RGX.bigWig bigWig (minus strand signal of unique reads) 5.4 MB
ENCFF154AYH.bed bed (peaks) 1.3 KB
ENCFF161ISV.bigWig bigWig (plus strand signal of unique reads) 5.7 MB
ENCFF167SMN.bigWig bigWig (plus strand signal of unique reads) 5.8 MB
ENCFF177GMP.bed bed (peaks) 376.0 KB
ENCFF182LNR.bed bed (peaks) 234.5 KB
ENCFF213IOD.bigBed bigBed (peaks) 797.5 KB
ENCFF217PBP.fastq fastq (reads) 265.3 MB
ENCFF296SGC.bigWig bigWig (plus strand signal of unique reads) 3.1 MB
ENCFF365ZOS.bed bed (peaks) 89.8 KB
ENCFF392QAQ.bed bed (peaks) 384.8 KB
ENCFF397HOJ.bigBed bigBed (peaks) 427.3 KB
ENCFF415BMS.bam bam (alignments) 42.6 MB
ENCFF430BKM.bed bed (peaks) 179.2 KB
ENCFF458CCV.bigBed bigBed (peaks) 246.8 KB
ENCFF531FNJ.bam bam (alignments) 105.1 MB
ENCFF533NRD.bigBed bigBed (peaks) 398.2 KB
ENCFF545FMX.bed bed (peaks) 1.2 KB
ENCFF586YCP.bigWig bigWig (minus strand signal of unique reads) 3.0 MB
ENCFF645QXB.bigBed bigBed (peaks) 783.8 KB
ENCFF656YTJ.bigWig bigWig (minus strand signal of unique reads) 2.9 MB
ENCFF669BCV.bed bed (peaks) 196.8 KB
ENCFF741BIN.fastq fastq (reads) 291.1 MB
ENCFF743GIA.bed bed (peaks) 200.8 KB
ENCFF763CJW.bigWig bigWig (plus strand signal of unique reads) 3.1 MB
ENCFF771ZQZ.bigBed bigBed (peaks) 885.9 KB
ENCFF781GFB.bigBed bigBed (peaks) 422.3 KB
ENCFF821CJH.bigWig bigWig (minus strand signal of unique reads) 5.5 MB
ENCFF838PWO.bigBed bigBed (peaks) 555.7 KB
ENCFF869TMY.bigBed bigBed (peaks) 215.2 KB
ENCFF938BSK.fastq fastq (reads) 278.4 MB
ENCFF945CYO.bam bam (alignments) 41.5 MB
ENCFF954XWJ.bam bam (alignments) 102.3 MB
ENCFF996KND.fastq fastq (reads) 244.3 MB
ENCSR120EAR ENCSR via encode_api

eCLIP experiment on K562 against RPS3

Homo sapiens
28 data files
FileTypeSize
ENCFF039XZE.bigWig bigWig (minus strand signal of unique reads) 6.6 MB
ENCFF094OTN.bam bam (alignments) 118.2 MB
ENCFF111EUR.fastq fastq (reads) 667.2 MB
ENCFF186FBQ.bigWig bigWig (plus strand signal of unique reads) 6.8 MB
ENCFF199OFQ.bigBed bigBed (peaks) 1.4 MB
ENCFF209JOZ.fastq fastq (reads) 661.2 MB
ENCFF223NWJ.bigBed bigBed (peaks) 1.1 MB
ENCFF250XVF.fastq fastq (reads) 591.8 MB
ENCFF261EDX.bigWig bigWig (minus strand signal of unique reads) 6.5 MB
ENCFF306SQC.bigBed bigBed (peaks) 1.4 MB
ENCFF323ZDL.bed bed (peaks) 656.4 KB
ENCFF467NIF.bed bed (peaks) 501.4 KB
ENCFF481DSP.bam bam (alignments) 112.3 MB
ENCFF487EXG.bed bed (peaks) 647.9 KB
ENCFF528YKE.bam bam (alignments) 115.3 MB
ENCFF530HTL.bed bed (peaks) 56.6 KB
ENCFF544ECV.fastq fastq (reads) 572.1 MB
ENCFF544OWP.bigWig bigWig (plus strand signal of unique reads) 6.9 MB
ENCFF546DDF.bed bed (peaks) 641.7 KB
ENCFF570JFT.bed bed (peaks) 492.8 KB
ENCFF658GQD.bigWig bigWig (minus strand signal of unique reads) 6.4 MB
ENCFF830RMG.bam bam (alignments) 115.0 MB
ENCFF834BGX.bed bed (peaks) 57.0 KB
ENCFF875KNZ.bigWig bigWig (plus strand signal of unique reads) 6.6 MB
ENCFF890WMA.bigBed bigBed (peaks) 1.4 MB
ENCFF896OMJ.bigWig bigWig (minus strand signal of unique reads) 6.5 MB
ENCFF922WMS.bed bed (peaks) 648.1 KB
ENCFF930CLN.bigWig bigWig (plus strand signal of unique reads) 6.7 MB
ENCSR301UQM ENCSR via encode_api

eCLIP experiment on K562 against GNL3

Homo sapiens
36 data files
FileTypeSize
ENCFF004XHQ.bed bed (peaks) 650.5 KB
ENCFF029RXW.bigBed bigBed (peaks) 832.6 KB
ENCFF048RLZ.bed bed (peaks) 1.0 KB
ENCFF103IUP.bigWig bigWig (minus strand signal of unique reads) 3.6 MB
ENCFF158KFL.bed bed (peaks) 145.6 KB
ENCFF171HNG.bigBed bigBed (peaks) 334.6 KB
ENCFF196IVQ.bigWig bigWig (minus strand signal of unique reads) 6.2 MB
ENCFF229XVK.bigBed bigBed (peaks) 1.2 MB
ENCFF282DMO.bam bam (alignments) 58.9 MB
ENCFF296QFP.bigWig bigWig (plus strand signal of unique reads) 3.7 MB
ENCFF298PPE.bigBed bigBed (peaks) 460.8 KB
ENCFF331KTS.bed bed (peaks) 640.7 KB
ENCFF362VEE.bigBed bigBed (peaks) 704.4 KB
ENCFF364XWE.fastq fastq (reads) 476.1 MB
ENCFF372XJQ.bam bam (alignments) 116.7 MB
ENCFF379DSY.bam bam (alignments) 119.6 MB
ENCFF410KLG.fastq fastq (reads) 442.9 MB
ENCFF424ZQP.fastq fastq (reads) 213.9 MB
ENCFF484XJQ.bam bam (alignments) 57.3 MB
ENCFF509YYT.fastq fastq (reads) 197.5 MB
ENCFF570HZI.bed bed (peaks) 184.6 KB
ENCFF572EKQ.bed bed (peaks) 390.2 KB
ENCFF581XWV.bigBed bigBed (peaks) 411.8 KB
ENCFF618SKT.bigBed bigBed (peaks) 243.8 KB
ENCFF654ODX.bigBed bigBed (peaks) 452.3 KB
ENCFF656FVZ.bigWig bigWig (minus strand signal of unique reads) 6.3 MB
ENCFF662YBW.bigBed bigBed (peaks) 1.6 MB
ENCFF694JOA.bigBed bigBed (peaks) 1.2 MB
ENCFF701JYH.bigWig bigWig (plus strand signal of unique reads) 6.4 MB
ENCFF711GSR.bigWig bigWig (plus strand signal of unique reads) 3.7 MB
ENCFF800XSC.bed bed (peaks) 946.0 B
ENCFF825HPV.bed bed (peaks) 159.1 KB
ENCFF893YAR.bed bed (peaks) 69.8 KB
ENCFF902LYR.bigWig bigWig (plus strand signal of unique reads) 6.5 MB
ENCFF917IBY.bigWig bigWig (minus strand signal of unique reads) 3.5 MB
ENCFF943BFF.bed bed (peaks) 188.9 KB
ENCSR247PDK ENCSR via encode_api

eCLIP control experiment on HepG2 against XRN2

Homo sapiens
8 data files
FileTypeSize
ENCFF147FKV.fastq fastq (reads) 780.5 MB
ENCFF200KGB.bigWig bigWig (plus strand signal of unique reads) 32.1 MB
ENCFF459NNJ.bigWig bigWig (plus strand signal of unique reads) 31.7 MB
ENCFF464CYN.bigWig bigWig (minus strand signal of unique reads) 31.5 MB
ENCFF547DPQ.bigWig bigWig (minus strand signal of unique reads) 31.1 MB
ENCFF561NXC.bam bam (alignments) 674.5 MB
ENCFF723GEY.bam bam (alignments) 666.6 MB
ENCFF947NEA.fastq fastq (reads) 730.1 MB
ENCSR331VNX ENCSR via encode_api

eCLIP experiment on K562 against FMR1

Homo sapiens
36 data files
FileTypeSize
ENCFF005ASC.bed bed (peaks) 834.2 KB
ENCFF045VDY.bigBed bigBed (peaks) 666.1 KB
ENCFF092SIF.bigBed bigBed (peaks) 1.9 MB
ENCFF111LIY.fastq fastq (reads) 240.0 MB
ENCFF130ZRT.bigBed bigBed (peaks) 802.5 KB
ENCFF217LJP.fastq fastq (reads) 273.1 MB
ENCFF310SIK.bigWig bigWig (minus strand signal of unique reads) 8.4 MB
ENCFF319MIE.fastq fastq (reads) 249.5 MB
ENCFF337OXN.bigBed bigBed (peaks) 2.4 MB
ENCFF367ZJS.bed bed (peaks) 990.6 KB
ENCFF377LAA.bigBed bigBed (peaks) 1.9 MB
ENCFF384LIR.bigBed bigBed (peaks) 3.2 MB
ENCFF393YLO.bed bed (peaks) 1.1 MB
ENCFF436TNC.bam bam (alignments) 121.7 MB
ENCFF441DGZ.bigWig bigWig (plus strand signal of unique reads) 11.0 MB
ENCFF441ZDI.bigWig bigWig (plus strand signal of unique reads) 11.2 MB
ENCFF454HHT.bigWig bigWig (minus strand signal of unique reads) 8.5 MB
ENCFF457ETB.bed bed (peaks) 950.5 KB
ENCFF464VRH.bed bed (peaks) 381.0 KB
ENCFF473OKU.bed bed (peaks) 316.7 KB
ENCFF480NUZ.bed bed (peaks) 73.9 KB
ENCFF525EHR.bam bam (alignments) 122.4 MB
ENCFF568TEQ.bigBed bigBed (peaks) 2.1 MB
ENCFF647ULQ.fastq fastq (reads) 219.7 MB
ENCFF693DNX.bam bam (alignments) 154.2 MB
ENCFF700XBC.bed bed (peaks) 70.4 KB
ENCFF734CGK.bigWig bigWig (plus strand signal of unique reads) 8.7 MB
ENCFF736XNI.bam bam (alignments) 151.7 MB
ENCFF845EEJ.bed bed (peaks) 1.2 MB
ENCFF860NIK.bigBed bigBed (peaks) 4.0 MB
ENCFF898JKK.bigBed bigBed (peaks) 2.4 MB
ENCFF907OCS.bigWig bigWig (minus strand signal of unique reads) 10.8 MB
ENCFF928HDW.bigWig bigWig (minus strand signal of unique reads) 10.9 MB
ENCFF965SEZ.bed bed (peaks) 934.2 KB
ENCFF988UEX.bigBed bigBed (peaks) 1.7 MB
ENCFF997CVI.bigWig bigWig (plus strand signal of unique reads) 8.7 MB
ENCSR576SHT ENCSR via encode_api

eCLIP experiment on K562 against DDX42

Homo sapiens
36 data files
FileTypeSize
ENCFF008GNX.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 10.5 MB
ENCFF028IXB.bed bed (peaks); assembly: GRCh38 739.0 KB
ENCFF032CWK.fastq fastq (reads) 303.1 MB
ENCFF092NLI.fastq fastq (reads) 263.6 MB
ENCFF106FPU.bam bam (alignments); assembly: GRCh38 157.8 MB
ENCFF155RZO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.6 MB
ENCFF172BNP.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF185UNK.bigBed bigBed (peaks); assembly: hg19 804.1 KB
ENCFF193HOO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.9 MB
ENCFF196YUL.fastq fastq (reads) 244.5 MB
ENCFF220NDA.bam bam (alignments); assembly: GRCh38 134.6 MB
ENCFF248XLD.bed bed (peaks); assembly: GRCh38 139.0 KB
ENCFF337FDR.bam bam (alignments); assembly: hg19 159.6 MB
ENCFF367VYJ.bed bed (peaks); assembly: hg19 2.8 KB
ENCFF374EMH.bigBed bigBed (peaks); assembly: hg19 1.5 MB
ENCFF393UZS.bed bed (peaks); assembly: hg19 425.1 KB
ENCFF399GGH.bed bed (peaks); assembly: GRCh38 3.0 KB
ENCFF404VAY.bed bed (peaks); assembly: GRCh38 134.1 KB
ENCFF411XIQ.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF441HHV.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.1 MB
ENCFF450GCJ.fastq fastq (reads) 282.7 MB
ENCFF452WPL.bigBed bigBed (peaks); assembly: hg19 864.0 KB
ENCFF486JIC.bed bed (peaks); assembly: hg19 387.3 KB
ENCFF535IDF.bigBed bigBed (peaks); assembly: GRCh38 369.1 KB
ENCFF615THP.bed bed (peaks); assembly: hg19 742.5 KB
ENCFF755FOC.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 6.9 MB
ENCFF821OQU.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF847LWE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 7.0 MB
ENCFF868JHW.bigBed bigBed (peaks); assembly: GRCh38 1.6 MB
ENCFF874RBP.bed bed (peaks); assembly: hg19 926.7 KB
ENCFF890IGS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.6 MB
ENCFF920GHG.bam bam (alignments); assembly: hg19 136.3 MB
ENCFF928GVI.bigBed bigBed (peaks); assembly: GRCh38 377.1 KB
ENCFF932WUK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.6 MB
ENCFF941XGK.bigBed bigBed (peaks); assembly: hg19 1.6 MB
ENCFF981ZPT.bed bed (peaks); assembly: GRCh38 922.0 KB
ENCSR668MJX ENCSR via encode_api

eCLIP experiment on HepG2 against GRSF1

Homo sapiens
36 data files
FileTypeSize
ENCFF012QNB.bigWig bigWig (minus strand signal of unique reads) 6.0 MB
ENCFF014TJW.bigWig bigWig (plus strand signal of unique reads) 9.5 MB
ENCFF035PED.bigBed bigBed (peaks) 923.0 KB
ENCFF041OHK.bed bed (peaks) 194.2 KB
ENCFF054TDA.bigBed bigBed (peaks) 476.4 KB
ENCFF059PZS.bam bam (alignments) 249.0 MB
ENCFF071NER.bigWig bigWig (minus strand signal of unique reads) 7.0 MB
ENCFF103XLC.bed bed (peaks) 24.3 KB
ENCFF134DRY.bed bed (peaks) 196.8 KB
ENCFF136TXI.bigBed bigBed (peaks) 470.7 KB
ENCFF159TLM.bed bed (peaks) 477.7 KB
ENCFF163SXQ.bam bam (alignments) 324.0 MB
ENCFF194GFF.bigBed bigBed (peaks) 1.8 MB
ENCFF219KHR.bed bed (peaks) 760.8 KB
ENCFF236THW.bed bed (peaks) 763.4 KB
ENCFF251ECY.bigBed bigBed (peaks) 1.4 MB
ENCFF275JLY.bigBed bigBed (peaks) 1.8 MB
ENCFF338LOF.bam bam (alignments) 305.7 MB
ENCFF374FFC.bam bam (alignments) 259.7 MB
ENCFF427GWM.fastq fastq (reads) 466.8 MB
ENCFF442HUJ.bigWig bigWig (minus strand signal of unique reads) 9.5 MB
ENCFF451GQU.bed bed (peaks) 779.3 KB
ENCFF472ZHK.bed bed (peaks) 465.4 KB
ENCFF609LIA.bigWig bigWig (minus strand signal of unique reads) 6.1 MB
ENCFF632PGX.bigBed bigBed (peaks) 1.3 MB
ENCFF683IWD.bigBed bigBed (peaks) 1.3 MB
ENCFF712VQF.bigWig bigWig (plus strand signal of unique reads) 6.3 MB
ENCFF731WXL.bigBed bigBed (peaks) 1.3 MB
ENCFF733VOV.bed bed (peaks) 777.2 KB
ENCFF844XOI.bigWig bigWig (plus strand signal of unique reads) 6.1 MB
ENCFF849QWP.bigBed bigBed (peaks) 917.5 KB
ENCFF886HXX.fastq fastq (reads) 618.2 MB
ENCFF901NTZ.bigWig bigWig (plus strand signal of unique reads) 9.8 MB
ENCFF929AWR.bed bed (peaks) 24.8 KB
ENCFF948LDL.fastq fastq (reads) 581.4 MB
ENCFF955NYU.fastq fastq (reads) 489.7 MB
ENCSR571VHI ENCSR via encode_api

eCLIP experiment on K562 against HNRNPUL1

Homo sapiens
36 data files
FileTypeSize
ENCFF068NME.bigWig bigWig (minus strand signal of unique reads) 19.4 MB
ENCFF069PNP.bigWig bigWig (minus strand signal of unique reads) 15.3 MB
ENCFF087TZL.bed bed (peaks) 93.8 KB
ENCFF124SVG.bigBed bigBed (peaks) 1.1 MB
ENCFF128VDM.bigBed bigBed (peaks) 577.7 KB
ENCFF139PAT.bigWig bigWig (plus strand signal of unique reads) 20.1 MB
ENCFF270LHK.bam bam (alignments) 273.3 MB
ENCFF271DCB.bigBed bigBed (peaks) 2.2 MB
ENCFF296NTJ.bed bed (peaks) 256.7 KB
ENCFF297PQZ.bed bed (peaks) 1.3 MB
ENCFF342XLD.fastq fastq (reads) 257.7 MB
ENCFF355PIN.bigBed bigBed (peaks) 2.2 MB
ENCFF399OSD.bed bed (peaks) 110.3 KB
ENCFF426AQN.bam bam (alignments) 352.9 MB
ENCFF472FBT.bam bam (alignments) 349.7 MB
ENCFF490BSS.bed bed (peaks) 1.0 MB
ENCFF523RZH.bam bam (alignments) 269.6 MB
ENCFF530RHM.bigWig bigWig (minus strand signal of unique reads) 15.2 MB
ENCFF566RSU.bigBed bigBed (peaks) 315.8 KB
ENCFF621CZT.fastq fastq (reads) 244.8 MB
ENCFF649VUE.bigBed bigBed (peaks) 1.3 MB
ENCFF658VCP.fastq fastq (reads) 344.5 MB
ENCFF725XMA.bed bed (peaks) 304.5 KB
ENCFF734NGD.bed bed (peaks) 1.0 MB
ENCFF821EXR.bed bed (peaks) 5.2 KB
ENCFF831UXT.fastq fastq (reads) 393.9 MB
ENCFF850KEG.bigWig bigWig (plus strand signal of unique reads) 15.8 MB
ENCFF889AWX.bed bed (peaks) 5.5 KB
ENCFF901WPA.bigWig bigWig (plus strand signal of unique reads) 20.2 MB
ENCFF933LJZ.bed bed (peaks) 1.4 MB
ENCFF948BMD.bigWig bigWig (plus strand signal of unique reads) 16.0 MB
ENCFF949HCV.bigBed bigBed (peaks) 1.7 MB
ENCFF962XXS.bigBed bigBed (peaks) 660.0 KB
ENCFF976FPE.bigBed bigBed (peaks) 1.7 MB
ENCFF977ZRH.bigBed bigBed (peaks) 283.5 KB
ENCFF994QNK.bigWig bigWig (minus strand signal of unique reads) 19.3 MB
ENCSR663NRA ENCSR via encode_api

eCLIP experiment on K562 against ZRANB2

Homo sapiens
36 data files
FileTypeSize
ENCFF012KZQ.bigBed bigBed (peaks) 1.0 MB
ENCFF029DQU.bigBed bigBed (peaks) 2.0 MB
ENCFF058OOW.bed bed (peaks) 9.4 KB
ENCFF114CSR.bigBed bigBed (peaks) 861.8 KB
ENCFF157TJP.bam bam (alignments) 61.4 MB
ENCFF175IFY.bigBed bigBed (peaks) 1.5 MB
ENCFF184GOJ.bigBed bigBed (peaks) 466.0 KB
ENCFF261EWN.bigBed bigBed (peaks) 1.2 MB
ENCFF263QPA.bed bed (peaks) 889.6 KB
ENCFF265MNS.bigWig bigWig (minus strand signal of unique reads) 6.7 MB
ENCFF267NIR.bigBed bigBed (peaks) 485.6 KB
ENCFF274LYE.bigWig bigWig (plus strand signal of unique reads) 9.2 MB
ENCFF348UPB.bam bam (alignments) 60.3 MB
ENCFF350ANF.bam bam (alignments) 155.7 MB
ENCFF360KVK.bigWig bigWig (minus strand signal of unique reads) 6.9 MB
ENCFF377TSD.bigBed bigBed (peaks) 1.2 MB
ENCFF435TFT.fastq fastq (reads) 705.4 MB
ENCFF464HWD.bed bed (peaks) 644.9 KB
ENCFF499ZJU.bigBed bigBed (peaks) 1.5 MB
ENCFF578TMK.bed bed (peaks) 640.5 KB
ENCFF588XPN.bam bam (alignments) 149.1 MB
ENCFF681RRF.fastq fastq (reads) 642.3 MB
ENCFF696QAI.bed bed (peaks) 196.7 KB
ENCFF704VCA.bigWig bigWig (plus strand signal of unique reads) 3.7 MB
ENCFF709ENB.bed bed (peaks) 915.6 KB
ENCFF722NAD.bigWig bigWig (minus strand signal of unique reads) 3.5 MB
ENCFF751JSR.bigWig bigWig (plus strand signal of unique reads) 3.7 MB
ENCFF755WML.bed bed (peaks) 509.9 KB
ENCFF889GSE.bigWig bigWig (plus strand signal of unique reads) 9.6 MB
ENCFF897MPT.fastq fastq (reads) 738.0 MB
ENCFF927FBB.bed bed (peaks) 223.9 KB
ENCFF955OGW.fastq fastq (reads) 587.7 MB
ENCFF958SCV.bigWig bigWig (minus strand signal of unique reads) 3.4 MB
ENCFF959QBQ.bed bed (peaks) 539.9 KB
ENCFF982GEG.bed bed (peaks) 9.2 KB
ENCFF997ZOA.bigBed bigBed (peaks) 2.1 MB
ENCSR927XDB ENCSR via encode_api

eCLIP control experiment on K562 against MTPAP

Homo sapiens
8 data files
FileTypeSize
ENCFF088TKT.fastq fastq (reads) 628.2 MB
ENCFF358UNB.bam bam (alignments) 538.4 MB
ENCFF464CQX.bigWig bigWig (plus strand signal of unique reads) 26.4 MB
ENCFF540KPA.bigWig bigWig (minus strand signal of unique reads) 25.5 MB
ENCFF803XPM.fastq fastq (reads) 664.5 MB
ENCFF810MJN.bigWig bigWig (minus strand signal of unique reads) 25.1 MB
ENCFF880NLA.bam bam (alignments) 546.6 MB
ENCFF883FHA.bigWig bigWig (plus strand signal of unique reads) 26.0 MB
ENCSR339FUY ENCSR via encode_api

eCLIP experiment on HepG2 against PCBP2

Homo sapiens
36 data files
FileTypeSize
ENCFF023OLB.bigWig bigWig (plus strand signal of unique reads) 20.5 MB
ENCFF024BBA.bigBed bigBed (peaks) 1.4 MB
ENCFF032HWP.bam bam (alignments) 234.2 MB
ENCFF074AQN.bed bed (peaks) 1.7 MB
ENCFF082XYR.bigBed bigBed (peaks) 3.0 MB
ENCFF176BGN.bigBed bigBed (peaks) 3.5 MB
ENCFF266KGE.bigWig bigWig (minus strand signal of unique reads) 14.4 MB
ENCFF282VHP.bigBed bigBed (peaks) 3.0 MB
ENCFF307HNT.bigBed bigBed (peaks) 3.5 MB
ENCFF322DXB.bed bed (peaks) 1.4 MB
ENCFF332NKK.fastq fastq (reads) 285.6 MB
ENCFF359KSX.fastq fastq (reads) 209.4 MB
ENCFF377RAB.bigBed bigBed (peaks) 2.7 MB
ENCFF412VMG.bed bed (peaks) 725.4 KB
ENCFF439OHA.bed bed (peaks) 843.5 KB
ENCFF454MWQ.bed bed (peaks) 1.7 MB
ENCFF488GID.fastq fastq (reads) 198.8 MB
ENCFF514GGZ.bed bed (peaks) 1.4 MB
ENCFF547AHN.bam bam (alignments) 229.1 MB
ENCFF556BWC.bigWig bigWig (minus strand signal of unique reads) 19.3 MB
ENCFF560CDL.bed bed (peaks) 202.9 KB
ENCFF585NYG.bigBed bigBed (peaks) 951.4 KB
ENCFF629OCF.bigBed bigBed (peaks) 3.3 MB
ENCFF642GNE.bed bed (peaks) 201.9 KB
ENCFF679YWY.bigWig bigWig (plus strand signal of unique reads) 20.2 MB
ENCFF803QKO.bam bam (alignments) 424.1 MB
ENCFF812IPR.bam bam (alignments) 434.7 MB
ENCFF822CXV.bigWig bigWig (plus strand signal of unique reads) 15.4 MB
ENCFF842LPQ.bigWig bigWig (plus strand signal of unique reads) 15.2 MB
ENCFF868AYD.bed bed (peaks) 316.3 KB
ENCFF868HYK.bigBed bigBed (peaks) 1.8 MB
ENCFF870MFW.bigBed bigBed (peaks) 721.1 KB
ENCFF877CWI.bed bed (peaks) 385.5 KB
ENCFF893VXG.fastq fastq (reads) 276.4 MB
ENCFF919LKK.bigWig bigWig (minus strand signal of unique reads) 14.6 MB
ENCFF933OSZ.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCSR099KAK ENCSR via encode_api

eCLIP control experiment on HepG2 against DDX6

Homo sapiens
8 data files
FileTypeSize
ENCFF158NBG.fastq fastq (reads) 652.1 MB
ENCFF198SGP.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCFF219DHH.fastq fastq (reads) 695.1 MB
ENCFF363WVY.bigWig bigWig (minus strand signal of unique reads) 19.3 MB
ENCFF463LHG.bam bam (alignments) 422.7 MB
ENCFF523EZL.bigWig bigWig (plus strand signal of unique reads) 20.1 MB
ENCFF686MTX.bam bam (alignments) 415.6 MB
ENCFF986YDO.bigWig bigWig (plus strand signal of unique reads) 19.8 MB
ENCSR180EJY ENCSR via encode_api

eCLIP control experiment on K562 against DDX55

Homo sapiens
8 data files
FileTypeSize
ENCFF034NUD.bam bam (alignments) 503.7 MB
ENCFF150UTZ.bigWig bigWig (plus strand signal of unique reads) 23.3 MB
ENCFF216XJE.fastq fastq (reads) 574.7 MB
ENCFF252ZZN.bam bam (alignments) 512.0 MB
ENCFF393RHA.bigWig bigWig (plus strand signal of unique reads) 22.9 MB
ENCFF920PUO.bigWig bigWig (minus strand signal of unique reads) 22.0 MB
ENCFF971JKG.fastq fastq (reads) 607.6 MB
ENCFF976KIN.bigWig bigWig (minus strand signal of unique reads) 22.4 MB
ENCSR999WKT ENCSR via encode_api

eCLIP experiment on K562 against DDX24

Homo sapiens
36 data files
FileTypeSize
ENCFF006KFT.bed bed (peaks) 1.1 MB
ENCFF023VLF.bam bam (alignments) 166.2 MB
ENCFF066CRM.bigBed bigBed (peaks) 2.3 MB
ENCFF091DPF.fastq fastq (reads) 400.8 MB
ENCFF097YVI.bed bed (peaks) 278.4 KB
ENCFF118QEP.bed bed (peaks) 302.5 KB
ENCFF142OCF.bed bed (peaks) 1.1 MB
ENCFF153DCN.bigWig bigWig (plus strand signal of unique reads) 11.5 MB
ENCFF165JUU.bigBed bigBed (peaks) 3.1 MB
ENCFF232GPA.bigBed bigBed (peaks) 2.9 MB
ENCFF240HDP.bam bam (alignments) 169.6 MB
ENCFF262QSQ.bigBed bigBed (peaks) 598.1 KB
ENCFF279DVI.bigBed bigBed (peaks) 634.0 KB
ENCFF279IBQ.bigWig bigWig (minus strand signal of unique reads) 11.1 MB
ENCFF280ZCF.bam bam (alignments) 187.4 MB
ENCFF342NDL.bigWig bigWig (minus strand signal of unique reads) 10.1 MB
ENCFF354NUG.bed bed (peaks) 1.1 MB
ENCFF357VDQ.bigWig bigWig (plus strand signal of unique reads) 10.3 MB
ENCFF379YES.bed bed (peaks) 953.9 KB
ENCFF442UZB.bigBed bigBed (peaks) 1.9 MB
ENCFF517ZWJ.bigBed bigBed (peaks) 2.4 MB
ENCFF533TMN.bigBed bigBed (peaks) 2.3 MB
ENCFF536KEA.bigBed bigBed (peaks) 2.2 MB
ENCFF537KWB.bed bed (peaks) 205.8 KB
ENCFF661UCF.fastq fastq (reads) 548.8 MB
ENCFF692JAV.fastq fastq (reads) 548.6 MB
ENCFF701ZYH.bed bed (peaks) 1.1 MB
ENCFF753RBY.bigWig bigWig (plus strand signal of unique reads) 11.4 MB
ENCFF768FYI.bam bam (alignments) 184.0 MB
ENCFF792GUZ.bigWig bigWig (minus strand signal of unique reads) 10.0 MB
ENCFF792WPY.bed bed (peaks) 205.4 KB
ENCFF795YLW.fastq fastq (reads) 393.2 MB
ENCFF864YFA.bed bed (peaks) 902.4 KB
ENCFF880YOU.bigWig bigWig (minus strand signal of unique reads) 11.2 MB
ENCFF940RTF.bigWig bigWig (plus strand signal of unique reads) 10.4 MB
ENCFF972OPC.bigBed bigBed (peaks) 1.9 MB
ENCSR258QKO ENCSR via encode_api

eCLIP experiment on K562 against XRCC6

Homo sapiens
36 data files
FileTypeSize
ENCFF007DHU.bed bed (peaks) 1.4 MB
ENCFF007SZX.bigBed bigBed (peaks) 3.9 MB
ENCFF013AAR.bed bed (peaks) 591.8 KB
ENCFF041HAI.fastq fastq (reads) 809.6 MB
ENCFF109SMA.bigBed bigBed (peaks) 3.0 MB
ENCFF267UFL.bigBed bigBed (peaks) 432.4 KB
ENCFF286MJI.bigWig bigWig (plus strand signal of unique reads) 14.6 MB
ENCFF290QYC.fastq fastq (reads) 839.0 MB
ENCFF293KBS.bed bed (peaks) 1.9 MB
ENCFF297MTE.bed bed (peaks) 1.4 MB
ENCFF303IAU.bed bed (peaks) 191.4 KB
ENCFF325WWS.bigBed bigBed (peaks) 2.9 MB
ENCFF329VBT.bed bed (peaks) 17.8 KB
ENCFF337RLS.bam bam (alignments) 258.8 MB
ENCFF338KRR.bigBed bigBed (peaks) 2.0 MB
ENCFF340LSX.bigWig bigWig (plus strand signal of unique reads) 14.4 MB
ENCFF352XMI.bigWig bigWig (minus strand signal of unique reads) 14.1 MB
ENCFF359NEI.bed bed (peaks) 175.1 KB
ENCFF455DRN.bam bam (alignments) 349.9 MB
ENCFF456IVU.bigWig bigWig (plus strand signal of unique reads) 18.1 MB
ENCFF467LDJ.bigWig bigWig (plus strand signal of unique reads) 18.4 MB
ENCFF512THN.bigWig bigWig (minus strand signal of unique reads) 17.4 MB
ENCFF561EKF.bigBed bigBed (peaks) 1.9 MB
ENCFF564IUM.bed bed (peaks) 1.9 MB
ENCFF614PTY.bigBed bigBed (peaks) 1.3 MB
ENCFF616DRD.bigBed bigBed (peaks) 3.9 MB
ENCFF626IJP.bigBed bigBed (peaks) 1.0 MB
ENCFF636DUC.bam bam (alignments) 266.1 MB
ENCFF677MAD.bigWig bigWig (minus strand signal of unique reads) 17.7 MB
ENCFF694JFS.bigWig bigWig (minus strand signal of unique reads) 13.8 MB
ENCFF701NLR.fastq fastq (reads) 914.0 MB
ENCFF702WLO.bigBed bigBed (peaks) 454.4 KB
ENCFF727MET.bam bam (alignments) 359.1 MB
ENCFF807BTL.bed bed (peaks) 542.4 KB
ENCFF830OQL.fastq fastq (reads) 942.1 MB
ENCFF958GMP.bed bed (peaks) 18.1 KB
ENCSR893NWB ENCSR via encode_api

eCLIP experiment on HepG2 against GRWD1

Homo sapiens
36 data files
FileTypeSize
ENCFF007UFF.bigWig bigWig (minus strand signal of unique reads) 36.3 MB
ENCFF012TOL.bed bed (peaks) 706.9 KB
ENCFF013JOY.bigWig bigWig (plus strand signal of unique reads) 37.3 MB
ENCFF024JAX.bigBed bigBed (peaks) 6.7 MB
ENCFF035EZA.bigBed bigBed (peaks) 7.1 MB
ENCFF045SJZ.bigWig bigWig (minus strand signal of unique reads) 37.3 MB
ENCFF113GFP.bigBed bigBed (peaks) 4.6 MB
ENCFF119TWW.bigBed bigBed (peaks) 1.7 MB
ENCFF144KIK.bigWig bigWig (plus strand signal of unique reads) 38.0 MB
ENCFF155KCD.bigBed bigBed (peaks) 1.4 MB
ENCFF159MMZ.bed bed (peaks) 496.8 KB
ENCFF176DKY.bigWig bigWig (minus strand signal of unique reads) 37.0 MB
ENCFF227BWP.bigBed bigBed (peaks) 5.8 MB
ENCFF321ARP.bed bed (peaks) 2.1 MB
ENCFF421MOI.bigWig bigWig (minus strand signal of unique reads) 36.3 MB
ENCFF429WEY.bigBed bigBed (peaks) 5.8 MB
ENCFF449TUS.bam bam (alignments) 961.6 MB
ENCFF451BKG.fastq fastq (reads) 641.0 MB
ENCFF459XDE.bam bam (alignments) 935.6 MB
ENCFF500BLJ.fastq fastq (reads) 682.2 MB
ENCFF538YNL.bed bed (peaks) 2.0 MB
ENCFF591FGE.bam bam (alignments) 933.9 MB
ENCFF689GDA.bed bed (peaks) 3.1 MB
ENCFF692OWU.bigWig bigWig (plus strand signal of unique reads) 37.3 MB
ENCFF713QGM.bed bed (peaks) 486.4 KB
ENCFF735YNV.bed bed (peaks) 3.1 MB
ENCFF790FPO.bigBed bigBed (peaks) 7.2 MB
ENCFF796NLW.bed bed (peaks) 654.3 KB
ENCFF832ZVT.bigBed bigBed (peaks) 4.8 MB
ENCFF860FQU.bigWig bigWig (plus strand signal of unique reads) 38.4 MB
ENCFF869UTD.bam bam (alignments) 895.4 MB
ENCFF874PLO.fastq fastq (reads) 731.3 MB
ENCFF886MOW.bed bed (peaks) 3.1 MB
ENCFF933DLG.fastq fastq (reads) 681.5 MB
ENCFF964TTL.bigBed bigBed (peaks) 7.2 MB
ENCFF971KUU.bed bed (peaks) 3.1 MB
ENCSR657TZZ ENCSR via encode_api

eCLIP experiment on K562 against ZNF622

Homo sapiens
36 data files
FileTypeSize
ENCFF005MIK.fastq fastq (reads) 532.7 MB
ENCFF028GDJ.bigBed bigBed (peaks) 6.2 MB
ENCFF037BNT.bed bed (peaks) 333.5 KB
ENCFF057UDS.bigBed bigBed (peaks) 4.2 MB
ENCFF087IME.bigWig bigWig (minus strand signal of unique reads) 20.8 MB
ENCFF116STJ.bigBed bigBed (peaks) 5.8 MB
ENCFF134QVX.bigWig bigWig (minus strand signal of unique reads) 20.8 MB
ENCFF167ADU.bigWig bigWig (plus strand signal of unique reads) 21.5 MB
ENCFF177JVW.bed bed (peaks) 2.3 MB
ENCFF177VMJ.bigWig bigWig (minus strand signal of unique reads) 20.0 MB
ENCFF216ACB.bam bam (alignments) 483.3 MB
ENCFF241RKD.fastq fastq (reads) 996.3 MB
ENCFF259ZHT.bam bam (alignments) 478.8 MB
ENCFF280WXN.bigBed bigBed (peaks) 5.0 MB
ENCFF282VKB.bed bed (peaks) 2.3 MB
ENCFF285IGP.bed bed (peaks) 335.1 KB
ENCFF356JJT.bigWig bigWig (minus strand signal of unique reads) 21.3 MB
ENCFF388PIX.bam bam (alignments) 495.0 MB
ENCFF389TCM.bed bed (peaks) 2.6 MB
ENCFF402TGJ.bigBed bigBed (peaks) 1.3 MB
ENCFF414WMX.bigBed bigBed (peaks) 4.1 MB
ENCFF416UBT.bigBed bigBed (peaks) 4.3 MB
ENCFF463IUW.bed bed (peaks) 1.8 MB
ENCFF464KEI.bed bed (peaks) 1.8 MB
ENCFF525LEL.bigBed bigBed (peaks) 5.0 MB
ENCFF529AAI.fastq fastq (reads) 505.6 MB
ENCFF554YEF.bigWig bigWig (plus strand signal of unique reads) 21.5 MB
ENCFF567UXH.bed bed (peaks) 2.6 MB
ENCFF727FDI.bigWig bigWig (plus strand signal of unique reads) 22.0 MB
ENCFF780TPJ.bigBed bigBed (peaks) 1.4 MB
ENCFF799JDN.bigBed bigBed (peaks) 4.3 MB
ENCFF840XXQ.bed bed (peaks) 648.8 KB
ENCFF869NWQ.bigWig bigWig (plus strand signal of unique reads) 20.7 MB
ENCFF889PGE.bed bed (peaks) 611.2 KB
ENCFF890BOX.fastq fastq (reads) 941.4 MB
ENCFF934JXI.bam bam (alignments) 458.7 MB
ENCSR290VLT ENCSR via encode_api

eCLIP experiment on HepG2 against MATR3

Homo sapiens
30 data files
FileTypeSize
ENCFF048GLZ.bigWig bigWig (plus strand signal of unique reads) 26.7 MB
ENCFF104ASV.bed bed (peaks) 544.4 KB
ENCFF171PTV.bed bed (peaks) 1.7 MB
ENCFF177BKV.bigWig bigWig (minus strand signal of unique reads) 19.5 MB
ENCFF223SWJ.bigWig bigWig (plus strand signal of unique reads) 18.9 MB
ENCFF240TER.bigBed bigBed (peaks) 779.2 KB
ENCFF288OTG.bed bed (peaks) 371.6 KB
ENCFF298YFY.bed bed (peaks) 142.5 KB
ENCFF312MNB.bigWig bigWig (plus strand signal of unique reads) 26.1 MB
ENCFF317UON.bigBed bigBed (peaks) 1.2 MB
ENCFF333CUY.bed bed (peaks) 1.8 MB
ENCFF364CXG.bigWig bigWig (minus strand signal of unique reads) 18.2 MB
ENCFF381UWC.bigWig bigWig (plus strand signal of unique reads) 20.4 MB
ENCFF453ITV.fastq fastq (reads) 358.5 MB
ENCFF455FVG.bigWig bigWig (minus strand signal of unique reads) 26.1 MB
ENCFF503HHO.bigWig bigWig (minus strand signal of unique reads) 25.5 MB
ENCFF527QLM.fastq fastq (reads) 384.7 MB
ENCFF587KKM.bed bed (peaks) 139.4 KB
ENCFF590CMG.bigBed bigBed (peaks) 4.5 MB
ENCFF601NWD.bam bam (alignments) 334.7 MB
ENCFF619UHD.bam bam (alignments) 504.4 MB
ENCFF699IQH.bigBed bigBed (peaks) 3.4 MB
ENCFF719KGK.bam bam (alignments) 361.3 MB
ENCFF764PHF.bam bam (alignments) 520.9 MB
ENCFF812QXZ.bigBed bigBed (peaks) 4.6 MB
ENCFF874BAL.bed bed (peaks) 2.5 MB
ENCFF882SWK.bed bed (peaks) 2.4 MB
ENCFF891MFI.fastq fastq (reads) 371.7 MB
ENCFF927IJF.fastq fastq (reads) 374.1 MB
ENCFF965ZCA.bigBed bigBed (peaks) 3.5 MB
ENCSR513NDD ENCSR via encode_api

eCLIP experiment on HepG2 against SRSF7

Homo sapiens
36 data files
FileTypeSize
ENCFF063OHJ.bigBed bigBed (peaks) 1.8 MB
ENCFF106PSH.bam bam (alignments) 202.5 MB
ENCFF130DJA.bed bed (peaks) 182.7 KB
ENCFF137MKV.bigWig bigWig (minus strand signal of unique reads) 6.4 MB
ENCFF180HOJ.bed bed (peaks) 423.8 KB
ENCFF250WLO.bed bed (peaks) 156.3 KB
ENCFF275DJT.bigBed bigBed (peaks) 353.7 KB
ENCFF295APP.bigBed bigBed (peaks) 393.2 KB
ENCFF317HGW.bed bed (peaks) 9.9 KB
ENCFF379FWK.bigWig bigWig (minus strand signal of unique reads) 6.4 MB
ENCFF410CCN.bigBed bigBed (peaks) 1.8 MB
ENCFF420KON.bigBed bigBed (peaks) 1.7 MB
ENCFF436ZEJ.bigBed bigBed (peaks) 878.7 KB
ENCFF459OEQ.bigWig bigWig (plus strand signal of unique reads) 12.9 MB
ENCFF546FQZ.bigWig bigWig (plus strand signal of unique reads) 6.6 MB
ENCFF550GIT.bigWig bigWig (minus strand signal of unique reads) 12.7 MB
ENCFF558CNE.bam bam (alignments) 110.8 MB
ENCFF578OMQ.fastq fastq (reads) 128.6 MB
ENCFF593CEQ.bed bed (peaks) 610.5 KB
ENCFF605JFT.fastq fastq (reads) 246.6 MB
ENCFF610RRL.bigBed bigBed (peaks) 1.0 MB
ENCFF619RHU.fastq fastq (reads) 239.2 MB
ENCFF632LPF.bam bam (alignments) 110.8 MB
ENCFF663IBZ.bigWig bigWig (plus strand signal of unique reads) 6.6 MB
ENCFF729MSV.fastq fastq (reads) 123.8 MB
ENCFF743ZXA.bam bam (alignments) 203.2 MB
ENCFF744KOY.bigBed bigBed (peaks) 1.1 MB
ENCFF771UQF.bigBed bigBed (peaks) 1.1 MB
ENCFF774EDY.bed bed (peaks) 1022.4 KB
ENCFF806OPN.bed bed (peaks) 529.6 KB
ENCFF850SVN.bigWig bigWig (minus strand signal of unique reads) 12.6 MB
ENCFF865AZP.bed bed (peaks) 9.9 KB
ENCFF892NZC.bigBed bigBed (peaks) 2.2 MB
ENCFF913UPA.bed bed (peaks) 606.1 KB
ENCFF924VSG.bigWig bigWig (plus strand signal of unique reads) 13.0 MB
ENCFF944XFZ.bed bed (peaks) 1.0 MB
ENCSR485QCG ENCSR via encode_api

eCLIP experiment on HepG2 against BCCIP

Homo sapiens
36 data files
FileTypeSize
ENCFF005HRW.bam bam (alignments) 201.5 MB
ENCFF018YJB.bed bed (peaks) 564.0 KB
ENCFF036HJS.bigWig bigWig (plus strand signal of unique reads) 13.7 MB
ENCFF081LVD.bam bam (alignments) 200.7 MB
ENCFF134LIU.bed bed (peaks) 12.8 KB
ENCFF178AAX.bigBed bigBed (peaks) 1.9 MB
ENCFF184OOX.bigWig bigWig (plus strand signal of unique reads) 13.7 MB
ENCFF193BBD.bigBed bigBed (peaks) 2.2 MB
ENCFF224GAC.bigBed bigBed (peaks) 1.1 MB
ENCFF287LMI.fastq fastq (reads) 218.1 MB
ENCFF292ANE.fastq fastq (reads) 226.7 MB
ENCFF296TYQ.bed bed (peaks) 1.3 MB
ENCFF300RFO.fastq fastq (reads) 220.1 MB
ENCFF377WFP.bed bed (peaks) 1.2 MB
ENCFF413RNE.bigBed bigBed (peaks) 511.5 KB
ENCFF421TBP.bigWig bigWig (minus strand signal of unique reads) 11.9 MB
ENCFF445THX.bigWig bigWig (minus strand signal of unique reads) 13.2 MB
ENCFF570UTN.bed bed (peaks) 548.2 KB
ENCFF616LPV.bed bed (peaks) 190.7 KB
ENCFF622JMI.bigBed bigBed (peaks) 2.2 MB
ENCFF624RYV.bigWig bigWig (plus strand signal of unique reads) 12.3 MB
ENCFF627YDB.bed bed (peaks) 1.3 MB
ENCFF634VRY.bigWig bigWig (minus strand signal of unique reads) 13.2 MB
ENCFF690EFW.bam bam (alignments) 171.7 MB
ENCFF698TRT.bed bed (peaks) 1.1 MB
ENCFF707GVV.bigBed bigBed (peaks) 2.1 MB
ENCFF731PYG.bam bam (alignments) 172.3 MB
ENCFF759IVI.bigBed bigBed (peaks) 2.0 MB
ENCFF842EFT.bed bed (peaks) 12.2 KB
ENCFF848EIH.bigWig bigWig (minus strand signal of unique reads) 11.9 MB
ENCFF887NCX.bigBed bigBed (peaks) 1.9 MB
ENCFF896YHT.fastq fastq (reads) 230.3 MB
ENCFF931YOU.bigBed bigBed (peaks) 471.6 KB
ENCFF975TTN.bigWig bigWig (plus strand signal of unique reads) 12.3 MB
ENCFF976DBV.bed bed (peaks) 211.5 KB
ENCFF993SQF.bigBed bigBed (peaks) 1.0 MB
ENCSR468FSW ENCSR via encode_api

eCLIP experiment on K562 against SRSF7

Homo sapiens
35 data files
FileTypeSize
ENCFF077YYE.fastq fastq (reads) 130.4 MB
ENCFF081CCQ.bigBed bigBed (peaks) 519.9 KB
ENCFF090BZK.bed bed (peaks) 842.2 KB
ENCFF120PTS.bigWig bigWig (minus strand signal of unique reads) 9.2 MB
ENCFF149XNS.bam bam (alignments) 146.7 MB
ENCFF210RVX.bigBed bigBed (peaks) 2.5 MB
ENCFF249SJD.bigWig bigWig (minus strand signal of unique reads) 12.6 MB
ENCFF302CUU.bam bam (alignments) 213.2 MB
ENCFF435RSV.bed bed (peaks) 217.2 KB
ENCFF435SBL.bigBed bigBed (peaks) 1.5 MB
ENCFF447CPA.fastq fastq (reads) 131.3 MB
ENCFF449ZHX.bed bed (peaks) 11.4 KB
ENCFF461OLQ.bigWig bigWig (plus strand signal of unique reads) 9.9 MB
ENCFF493RTH.bigWig bigWig (plus strand signal of unique reads) 9.6 MB
ENCFF514XIM.bigWig bigWig (plus strand signal of unique reads) 13.3 MB
ENCFF542LDV.bam bam (alignments) 151.5 MB
ENCFF598URC.bed bed (peaks) 593.4 KB
ENCFF662IDU.bigBed bigBed (peaks) 507.0 KB
ENCFF666GUD.bigBed bigBed (peaks) 1.7 MB
ENCFF726GHH.bigBed bigBed (peaks) 1.1 MB
ENCFF728JKU.bed bed (peaks) 836.6 KB
ENCFF732TWX.bigBed bigBed (peaks) 1.5 MB
ENCFF734HPR.bed bed (peaks) 631.9 KB
ENCFF762FNM.bigBed bigBed (peaks) 1.1 MB
ENCFF780OCY.bed bed (peaks) 12.0 KB
ENCFF789FCB.fastq fastq (reads) 272.3 MB
ENCFF822SZT.bed bed (peaks) 211.1 KB
ENCFF856RRP.bigWig bigWig (minus strand signal of unique reads) 9.4 MB
ENCFF882BNF.bigBed bigBed (peaks) 1.7 MB
ENCFF899CLF.bigWig bigWig (minus strand signal of unique reads) 12.8 MB
ENCFF931PJS.fastq fastq (reads) 273.3 MB
ENCFF937IVH.bam bam (alignments) 208.1 MB
ENCFF939AMV.bed bed (peaks) 1020.9 KB
ENCFF974CLY.bigWig bigWig (plus strand signal of unique reads) 13.1 MB
ENCFF986KGV.bed bed (peaks) 1.0 MB
ENCSR887LPK ENCSR via encode_api

eCLIP experiment on K562 against EWSR1

Homo sapiens
36 data files
FileTypeSize
ENCFF089KGQ.bigBed bigBed (peaks) 1.9 MB
ENCFF130VUZ.bigWig bigWig (plus strand signal of unique reads) 14.5 MB
ENCFF149PCY.bed bed (peaks) 102.2 KB
ENCFF152FIO.bigBed bigBed (peaks) 2.1 MB
ENCFF190DZN.bigBed bigBed (peaks) 1.9 MB
ENCFF286FNZ.bigWig bigWig (plus strand signal of unique reads) 16.9 MB
ENCFF288UBG.bed bed (peaks) 108.2 KB
ENCFF323APL.bed bed (peaks) 314.8 KB
ENCFF347DCZ.bigWig bigWig (plus strand signal of unique reads) 14.8 MB
ENCFF349OGH.bigBed bigBed (peaks) 311.3 KB
ENCFF454UJY.bigBed bigBed (peaks) 1.1 MB
ENCFF455LTY.bam bam (alignments) 311.0 MB
ENCFF472AQE.bigWig bigWig (plus strand signal of unique reads) 17.4 MB
ENCFF479DUE.bed bed (peaks) 330.0 KB
ENCFF503AVX.bigWig bigWig (minus strand signal of unique reads) 13.6 MB
ENCFF514NRD.fastq fastq (reads) 194.9 MB
ENCFF529KND.fastq fastq (reads) 166.6 MB
ENCFF535SBV.bed bed (peaks) 1.1 MB
ENCFF607ZRF.bed bed (peaks) 181.5 KB
ENCFF621ZUN.bed bed (peaks) 1015.3 KB
ENCFF658QZE.bigWig bigWig (minus strand signal of unique reads) 15.9 MB
ENCFF700TZR.bigWig bigWig (minus strand signal of unique reads) 16.2 MB
ENCFF707PCZ.bigBed bigBed (peaks) 798.2 KB
ENCFF717ZFI.bigBed bigBed (peaks) 2.1 MB
ENCFF758RAD.bed bed (peaks) 1006.0 KB
ENCFF777PUE.bigBed bigBed (peaks) 757.6 KB
ENCFF797UGN.fastq fastq (reads) 197.7 MB
ENCFF842YPC.bam bam (alignments) 303.2 MB
ENCFF890NIT.bed bed (peaks) 180.9 KB
ENCFF895XBQ.bigBed bigBed (peaks) 342.8 KB
ENCFF921GQG.fastq fastq (reads) 169.5 MB
ENCFF922VUQ.bam bam (alignments) 268.5 MB
ENCFF951IMO.bigWig bigWig (minus strand signal of unique reads) 13.8 MB
ENCFF975NJX.bam bam (alignments) 260.6 MB
ENCFF994ALN.bigBed bigBed (peaks) 1.2 MB
ENCFF998MNV.bed bed (peaks) 1.1 MB
ENCSR224QWC ENCSR via encode_api

eCLIP experiment on K562 against FXR2

Homo sapiens
36 data files
FileTypeSize
ENCFF004XSV.bed bed (peaks) 279.6 KB
ENCFF016LWQ.bigWig bigWig (minus strand signal of unique reads) 9.3 MB
ENCFF027VSR.bigBed bigBed (peaks) 2.2 MB
ENCFF039HYM.bam bam (alignments) 144.4 MB
ENCFF081NPT.bigWig bigWig (plus strand signal of unique reads) 10.3 MB
ENCFF164SVS.bigBed bigBed (peaks) 2.8 MB
ENCFF167CYW.bigBed bigBed (peaks) 2.1 MB
ENCFF179VQL.fastq fastq (reads) 217.8 MB
ENCFF237PCI.bed bed (peaks) 998.3 KB
ENCFF257DYY.bigWig bigWig (minus strand signal of unique reads) 9.3 MB
ENCFF315HYU.bed bed (peaks) 93.7 KB
ENCFF323QTM.bigBed bigBed (peaks) 2.0 MB
ENCFF356YQZ.bigBed bigBed (peaks) 1.7 MB
ENCFF363IJZ.bed bed (peaks) 90.8 KB
ENCFF390XNM.fastq fastq (reads) 199.5 MB
ENCFF394EQW.bed bed (peaks) 1.1 MB
ENCFF459RQT.bam bam (alignments) 146.8 MB
ENCFF478FFU.bigWig bigWig (plus strand signal of unique reads) 10.2 MB
ENCFF486BGJ.bigWig bigWig (minus strand signal of unique reads) 10.0 MB
ENCFF486RBU.bigWig bigWig (minus strand signal of unique reads) 10.1 MB
ENCFF487CVX.fastq fastq (reads) 213.7 MB
ENCFF533NOT.bed bed (peaks) 1.0 MB
ENCFF616XVI.fastq fastq (reads) 237.2 MB
ENCFF638BKP.bigWig bigWig (plus strand signal of unique reads) 9.5 MB
ENCFF639OOE.bed bed (peaks) 976.5 KB
ENCFF649JBB.bigBed bigBed (peaks) 2.0 MB
ENCFF679UMY.bed bed (peaks) 811.3 KB
ENCFF713BGN.bigWig bigWig (plus strand signal of unique reads) 9.5 MB
ENCFF847YIY.bigBed bigBed (peaks) 3.8 MB
ENCFF853ORC.bigBed bigBed (peaks) 910.0 KB
ENCFF871ZJM.bed bed (peaks) 1.1 MB
ENCFF880NPI.bam bam (alignments) 143.6 MB
ENCFF905TKG.bigBed bigBed (peaks) 2.0 MB
ENCFF950NHZ.bam bam (alignments) 145.8 MB
ENCFF980OWT.bigBed bigBed (peaks) 597.0 KB
ENCFF981JDY.bed bed (peaks) 382.3 KB
ENCSR384MWO ENCSR via encode_api

eCLIP experiment on HepG2 against CSTF2

Homo sapiens
34 data files
FileTypeSize
ENCFF070WAE.bigBed bigBed (peaks) 6.7 MB
ENCFF103BFG.bam bam (alignments) 1.0 GB
ENCFF175HHG.bam bam (alignments) 654.5 MB
ENCFF180MDZ.fastq fastq (reads) 468.8 MB
ENCFF191KGC.bigWig bigWig (minus strand signal of unique reads) 33.7 MB
ENCFF222ULF.bed bed (peaks) 67.9 KB
ENCFF349SVY.bed bed (peaks) 71.2 KB
ENCFF366XCA.fastq fastq (reads) 508.1 MB
ENCFF370ZBJ.bed bed (peaks) 3.7 MB
ENCFF376BHV.bigBed bigBed (peaks) 625.7 KB
ENCFF399CRA.bam bam (alignments) 1.0 GB
ENCFF408GJH.fastq fastq (reads) 653.5 MB
ENCFF417RIT.bed bed (peaks) 706.5 KB
ENCFF463YTG.bigBed bigBed (peaks) 516.4 KB
ENCFF470CWS.bigWig bigWig (minus strand signal of unique reads) 34.0 MB
ENCFF532CDP.bigBed bigBed (peaks) 5.3 MB
ENCFF548SIH.bed bed (peaks) 2.9 MB
ENCFF580TXC.bigBed bigBed (peaks) 1.1 MB
ENCFF583SUZ.bigWig bigWig (plus strand signal of unique reads) 49.8 MB
ENCFF597QAD.fastq fastq (reads) 699.6 MB
ENCFF616EZQ.bam bam (alignments) 646.5 MB
ENCFF631HDH.bed bed (peaks) 279.3 KB
ENCFF645IXY.bed bed (peaks) 3.7 MB
ENCFF731EAQ.bed bed (peaks) 210.3 KB
ENCFF754CEO.bigBed bigBed (peaks) 5.4 MB
ENCFF809MHM.bed bed (peaks) 556.7 KB
ENCFF832WSM.bigBed bigBed (peaks) 1.5 MB
ENCFF854WKT.bigWig bigWig (minus strand signal of unique reads) 48.9 MB
ENCFF873ZCC.bigWig bigWig (minus strand signal of unique reads) 49.4 MB
ENCFF892JUQ.bed bed (peaks) 2.9 MB
ENCFF895BUH.bigWig bigWig (plus strand signal of unique reads) 34.8 MB
ENCFF930JBO.bigBed bigBed (peaks) 6.6 MB
ENCFF932RHC.bigWig bigWig (plus strand signal of unique reads) 35.1 MB
ENCFF982KSU.bigWig bigWig (plus strand signal of unique reads) 50.2 MB
ENCSR961OKA ENCSR via encode_api

eCLIP experiment on HepG2 against LARP7

Homo sapiens
36 data files
FileTypeSize
ENCFF021RGI.bigWig bigWig (plus strand signal of unique reads) 985.7 KB
ENCFF086NCN.bam bam (alignments) 17.5 MB
ENCFF094NLZ.bigWig bigWig (minus strand signal of unique reads) 957.3 KB
ENCFF111FGV.bigBed bigBed (peaks) 871.3 KB
ENCFF237QRX.fastq fastq (reads) 248.7 MB
ENCFF288CUS.bigWig bigWig (minus strand signal of unique reads) 2.9 MB
ENCFF302FFF.bed bed (peaks) 6.3 KB
ENCFF307MDW.bed bed (peaks) 6.7 KB
ENCFF345DPL.bam bam (alignments) 54.5 MB
ENCFF349EFG.bigBed bigBed (peaks) 350.6 KB
ENCFF359PQT.bigBed bigBed (peaks) 348.4 KB
ENCFF406RMO.bam bam (alignments) 17.7 MB
ENCFF419HTA.fastq fastq (reads) 279.1 MB
ENCFF440FLF.bed bed (peaks) 241.6 KB
ENCFF444BRP.bigWig bigWig (minus strand signal of unique reads) 950.1 KB
ENCFF456IDX.bigBed bigBed (peaks) 212.8 KB
ENCFF475MDR.bigWig bigWig (plus strand signal of unique reads) 983.4 KB
ENCFF511UJI.bigBed bigBed (peaks) 779.1 KB
ENCFF554DOS.bed bed (peaks) 190.6 KB
ENCFF580VMP.bigBed bigBed (peaks) 396.4 KB
ENCFF581UPI.bigBed bigBed (peaks) 240.7 KB
ENCFF602EAQ.bigWig bigWig (plus strand signal of unique reads) 3.0 MB
ENCFF647TKI.bed bed (peaks) 153.0 KB
ENCFF648IVU.bed bed (peaks) 147.1 KB
ENCFF699ZLU.bed bed (peaks) 155.0 KB
ENCFF715ENY.bigWig bigWig (plus strand signal of unique reads) 3.0 MB
ENCFF726UBI.bigBed bigBed (peaks) 460.0 KB
ENCFF774NGW.bed bed (peaks) 239.7 KB
ENCFF805KJP.bam bam (alignments) 55.0 MB
ENCFF805TLC.bigBed bigBed (peaks) 553.3 KB
ENCFF818ZDH.bed bed (peaks) 91.6 KB
ENCFF834FSL.fastq fastq (reads) 220.4 MB
ENCFF932HYJ.fastq fastq (reads) 246.6 MB
ENCFF943MCG.bed bed (peaks) 86.2 KB
ENCFF956QRJ.bigWig bigWig (minus strand signal of unique reads) 2.9 MB
ENCFF970YGH.bigBed bigBed (peaks) 280.9 KB
ENCSR795CAI ENCSR via encode_api

eCLIP experiment on K562 against HNRNPL

Homo sapiens
26 data files
FileTypeSize
ENCFF011UYB.bigBed bigBed (peaks) 5.9 MB
ENCFF047HJB.bigBed bigBed (peaks) 1.5 MB
ENCFF077OSY.bed bed (peaks) 3.7 MB
ENCFF142CTH.bigWig bigWig (minus strand signal of unique reads) 35.8 MB
ENCFF265DCY.bigWig bigWig (minus strand signal of unique reads) 38.4 MB
ENCFF296JHG.bed bed (peaks) 133.4 KB
ENCFF305DWD.bigWig bigWig (plus strand signal of unique reads) 32.3 MB
ENCFF317GJD.bigWig bigWig (minus strand signal of unique reads) 31.5 MB
ENCFF330GSE.bam bam (alignments) 691.3 MB
ENCFF376FVR.bigWig bigWig (plus strand signal of unique reads) 36.8 MB
ENCFF401YRZ.bed bed (peaks) 3.3 MB
ENCFF431VLG.bam bam (alignments) 835.1 MB
ENCFF490VFL.fastq fastq (reads) 633.4 MB
ENCFF549QWD.fastq fastq (reads) 647.2 MB
ENCFF669YDE.fastq fastq (reads) 677.8 MB
ENCFF732DVC.bigBed bigBed (peaks) 6.6 MB
ENCFF775AIE.bam bam (alignments) 659.4 MB
ENCFF782DAY.bed bed (peaks) 3.9 MB
ENCFF784INC.bigWig bigWig (minus strand signal of unique reads) 33.0 MB
ENCFF796KSB.bed bed (peaks) 3.4 MB
ENCFF868IOA.fastq fastq (reads) 605.4 MB
ENCFF917CBK.bed bed (peaks) 136.7 KB
ENCFF936QWH.bigWig bigWig (plus strand signal of unique reads) 33.4 MB
ENCFF947TVI.bigWig bigWig (plus strand signal of unique reads) 39.6 MB
ENCFF972QCF.bigBed bigBed (peaks) 1.3 MB
ENCFF993XXG.bam bam (alignments) 774.5 MB
ENCSR257OYO ENCSR via encode_api

eCLIP control experiment on HepG2 against NCBP2

Homo sapiens
8 data files
FileTypeSize
ENCFF016MTU.fastq fastq (reads) 623.2 MB
ENCFF124RGI.bigWig bigWig (minus strand signal of unique reads) 14.3 MB
ENCFF232YSX.bam bam (alignments) 326.9 MB
ENCFF244JYE.bigWig bigWig (plus strand signal of unique reads) 14.3 MB
ENCFF304ECY.fastq fastq (reads) 633.7 MB
ENCFF388GHK.bigWig bigWig (plus strand signal of unique reads) 14.5 MB
ENCFF838MYV.bam bam (alignments) 332.0 MB
ENCFF870FZW.bigWig bigWig (minus strand signal of unique reads) 14.0 MB
ENCSR648LAH ENCSR via encode_api

eCLIP experiment on HepG2 against DDX3X

Homo sapiens
36 data files
FileTypeSize
ENCFF002LWJ.bigWig bigWig (minus strand signal of unique reads) 14.4 MB
ENCFF015JWG.bigBed bigBed (peaks) 703.3 KB
ENCFF033UUP.bigWig bigWig (plus strand signal of unique reads) 6.9 MB
ENCFF034VAT.bigBed bigBed (peaks) 2.9 MB
ENCFF055DVS.bigBed bigBed (peaks) 1.3 MB
ENCFF059FHR.fastq fastq (reads) 673.2 MB
ENCFF110YPM.bigWig bigWig (plus strand signal of unique reads) 6.7 MB
ENCFF244ADV.fastq fastq (reads) 712.3 MB
ENCFF312SMY.bed bed (peaks) 581.4 KB
ENCFF336PLF.bigBed bigBed (peaks) 1.6 MB
ENCFF371HBY.bigWig bigWig (minus strand signal of unique reads) 6.6 MB
ENCFF392EOJ.bigWig bigWig (minus strand signal of unique reads) 6.4 MB
ENCFF397MAX.bed bed (peaks) 274.9 KB
ENCFF402KOO.bam bam (alignments) 258.1 MB
ENCFF484KWX.fastq fastq (reads) 680.5 MB
ENCFF500QBI.bigBed bigBed (peaks) 1.7 MB
ENCFF524KUN.fastq fastq (reads) 652.3 MB
ENCFF541RQV.bigBed bigBed (peaks) 1.0 MB
ENCFF562CTF.bigBed bigBed (peaks) 2.6 MB
ENCFF624DZN.bigBed bigBed (peaks) 2.6 MB
ENCFF635SWD.bed bed (peaks) 1.3 MB
ENCFF637BHY.bed bed (peaks) 399.0 KB
ENCFF766CEZ.bed bed (peaks) 856.3 KB
ENCFF777NMK.bed bed (peaks) 199.3 KB
ENCFF798XQM.bed bed (peaks) 1.3 MB
ENCFF799ICU.bed bed (peaks) 790.4 KB
ENCFF852SBL.bigBed bigBed (peaks) 2.2 MB
ENCFF856BBW.bigWig bigWig (plus strand signal of unique reads) 15.1 MB
ENCFF871UZO.bed bed (peaks) 764.9 KB
ENCFF878MOI.bigWig bigWig (plus strand signal of unique reads) 14.8 MB
ENCFF885OWJ.bed bed (peaks) 208.7 KB
ENCFF889OOU.bam bam (alignments) 136.1 MB
ENCFF897PUV.bigBed bigBed (peaks) 2.0 MB
ENCFF951KHO.bigWig bigWig (minus strand signal of unique reads) 14.7 MB
ENCFF957SIF.bam bam (alignments) 128.5 MB
ENCFF984UNN.bam bam (alignments) 266.5 MB
ENCSR506UPY ENCSR via encode_api

eCLIP experiment on HepG2 against SUGP2

Homo sapiens
34 data files
FileTypeSize
ENCFF013JLF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 46.6 MB
ENCFF021YLI.bed bed (peaks); assembly: hg19 648.5 KB
ENCFF094XXN.bed bed (peaks); assembly: GRCh38 189.2 KB
ENCFF104AQW.bed bed (peaks); assembly: GRCh38 214.9 KB
ENCFF126YYJ.bigBed bigBed (peaks); assembly: GRCh38 511.8 KB
ENCFF153AHV.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF179OBF.fastq fastq (reads) 711.4 MB
ENCFF187DUQ.bed bed (peaks); assembly: hg19 4.0 MB
ENCFF191XRG.bed bed (peaks); assembly: GRCh38 305.1 KB
ENCFF227NBE.bigBed bigBed (peaks); assembly: hg19 1.3 MB
ENCFF265BFS.bam bam (alignments); assembly: hg19 995.5 MB
ENCFF277PGA.bigBed bigBed (peaks); assembly: hg19 7.8 MB
ENCFF319BFO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 42.7 MB
ENCFF358YCG.fastq fastq (reads) 717.1 MB
ENCFF451TDR.fastq fastq (reads) 761.4 MB
ENCFF471YGE.bigBed bigBed (peaks); assembly: GRCh38 7.1 MB
ENCFF475UFB.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 45.5 MB
ENCFF479OSQ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 41.7 MB
ENCFF523CEP.bed bed (peaks); assembly: hg19 581.0 KB
ENCFF556QBW.bam bam (alignments); assembly: hg19 895.9 MB
ENCFF557XZB.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 44.3 MB
ENCFF572VUS.bed bed (peaks); assembly: GRCh38 4.0 MB
ENCFF600AXE.bam bam (alignments); assembly: GRCh38 961.7 MB
ENCFF637DYJ.bigBed bigBed (peaks); assembly: GRCh38 7.8 MB
ENCFF699DTX.bed bed (peaks); assembly: hg19 4.4 MB
ENCFF699QMT.bam bam (alignments); assembly: GRCh38 854.4 MB
ENCFF720UIL.bigBed bigBed (peaks); assembly: GRCh38 553.2 KB
ENCFF764MPF.bed bed (peaks); assembly: hg19 308.5 KB
ENCFF781IEY.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 46.6 MB
ENCFF848JIF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 43.1 MB
ENCFF873UBU.fastq fastq (reads) 771.3 MB
ENCFF935UME.bed bed (peaks); assembly: GRCh38 4.4 MB
ENCFF956IWG.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 47.9 MB
ENCFF990PJC.bigBed bigBed (peaks); assembly: hg19 7.2 MB
ENCSR295OKT ENCSR via encode_api

eCLIP experiment on K562 against RBM22

Homo sapiens
36 data files
FileTypeSize
ENCFF013KNT.bigWig bigWig (plus strand signal of unique reads) 5.3 MB
ENCFF016HLD.bigWig bigWig (plus strand signal of unique reads) 5.3 MB
ENCFF020UVE.bed bed (peaks) 495.9 KB
ENCFF023UKH.bigBed bigBed (peaks) 997.2 KB
ENCFF039FGP.bed bed (peaks) 20.7 KB
ENCFF045LAO.bam bam (alignments) 116.5 MB
ENCFF074GNZ.bed bed (peaks) 427.2 KB
ENCFF080OLT.fastq fastq (reads) 214.2 MB
ENCFF089HCN.bigBed bigBed (peaks) 306.3 KB
ENCFF150ZOO.bed bed (peaks) 424.9 KB
ENCFF163RYF.fastq fastq (reads) 192.3 MB
ENCFF175VFW.bigWig bigWig (plus strand signal of unique reads) 5.6 MB
ENCFF184OKI.bigBed bigBed (peaks) 877.6 KB
ENCFF202OGT.bigBed bigBed (peaks) 340.2 KB
ENCFF203DIN.bigBed bigBed (peaks) 623.9 KB
ENCFF211NZH.bigWig bigWig (minus strand signal of unique reads) 5.1 MB
ENCFF262TLW.bigBed bigBed (peaks) 560.6 KB
ENCFF280TBX.bigWig bigWig (minus strand signal of unique reads) 5.1 MB
ENCFF326QNK.bed bed (peaks) 143.7 KB
ENCFF345FJL.bed bed (peaks) 122.3 KB
ENCFF367YKB.bam bam (alignments) 122.2 MB
ENCFF374JUK.bed bed (peaks) 298.5 KB
ENCFF391IBH.bam bam (alignments) 120.9 MB
ENCFF396ABE.bigBed bigBed (peaks) 1.4 MB
ENCFF462WNO.bigWig bigWig (minus strand signal of unique reads) 5.4 MB
ENCFF485OHB.bigBed bigBed (peaks) 1.3 MB
ENCFF539JEK.bigWig bigWig (minus strand signal of unique reads) 5.5 MB
ENCFF543MGV.bigBed bigBed (peaks) 880.0 KB
ENCFF634FPH.bigWig bigWig (plus strand signal of unique reads) 5.6 MB
ENCFF828HVQ.bam bam (alignments) 117.8 MB
ENCFF849YEW.bed bed (peaks) 346.5 KB
ENCFF899HGF.bed bed (peaks) 494.2 KB
ENCFF972ZMJ.bed bed (peaks) 19.9 KB
ENCFF980VDY.bigBed bigBed (peaks) 994.3 KB
ENCFF981SGX.fastq fastq (reads) 208.4 MB
ENCFF999SQE.fastq fastq (reads) 232.7 MB
ENCSR202BFN ENCSR via encode_api

eCLIP experiment on HepG2 against U2AF2

Homo sapiens
36 data files
FileTypeSize
ENCFF006ZCJ.bigBed bigBed (peaks) 5.6 MB
ENCFF016VPA.bigBed bigBed (peaks) 5.6 MB
ENCFF033XVX.bam bam (alignments) 344.8 MB
ENCFF049YYD.bigBed bigBed (peaks) 3.3 MB
ENCFF067JAD.bed bed (peaks) 2.9 MB
ENCFF087ANO.bigWig bigWig (plus strand signal of unique reads) 20.9 MB
ENCFF138BSL.bigBed bigBed (peaks) 761.6 KB
ENCFF152AGZ.bigBed bigBed (peaks) 1.6 MB
ENCFF159SPZ.bigWig bigWig (minus strand signal of unique reads) 20.5 MB
ENCFF159VOF.bed bed (peaks) 222.3 KB
ENCFF202TGG.bed bed (peaks) 339.2 KB
ENCFF224DDZ.bigWig bigWig (minus strand signal of unique reads) 20.4 MB
ENCFF225OKE.bigBed bigBed (peaks) 4.4 MB
ENCFF243RQR.bed bed (peaks) 2.1 MB
ENCFF296DKM.bigBed bigBed (peaks) 733.1 KB
ENCFF309GTH.bigBed bigBed (peaks) 2.1 MB
ENCFF358STL.bam bam (alignments) 507.3 MB
ENCFF368XEI.bigWig bigWig (minus strand signal of unique reads) 27.3 MB
ENCFF423WYC.bigWig bigWig (minus strand signal of unique reads) 27.4 MB
ENCFF440IJI.fastq fastq (reads) 251.7 MB
ENCFF444TCK.bed bed (peaks) 2.9 MB
ENCFF523JWI.bed bed (peaks) 2.1 MB
ENCFF536AFD.bigWig bigWig (plus strand signal of unique reads) 21.0 MB
ENCFF549FYY.bigBed bigBed (peaks) 4.3 MB
ENCFF555WXD.bam bam (alignments) 511.4 MB
ENCFF559BLA.fastq fastq (reads) 302.4 MB
ENCFF565HKG.fastq fastq (reads) 294.2 MB
ENCFF653IKI.bigWig bigWig (plus strand signal of unique reads) 27.6 MB
ENCFF655HHB.bed bed (peaks) 964.3 KB
ENCFF683PRA.bed bed (peaks) 361.7 KB
ENCFF706QJH.bam bam (alignments) 342.5 MB
ENCFF721PWF.bed bed (peaks) 224.6 KB
ENCFF844XTT.bigBed bigBed (peaks) 3.1 MB
ENCFF912MAK.fastq fastq (reads) 230.4 MB
ENCFF913WRH.bigWig bigWig (plus strand signal of unique reads) 27.5 MB
ENCFF917CEZ.bed bed (peaks) 885.8 KB
ENCSR529GSJ ENCSR via encode_api

eCLIP experiment on K562 against DHX30

Homo sapiens
34 data files
FileTypeSize
ENCFF028SVZ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 11.2 MB
ENCFF050FPH.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 5.6 MB
ENCFF116KYR.fastq fastq (reads) 526.8 MB
ENCFF128AKC.bed bed (peaks); assembly: GRCh38 21.0 KB
ENCFF134SKQ.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF148LOE.bed bed (peaks); assembly: hg19 512.1 KB
ENCFF162KHT.bed bed (peaks); assembly: GRCh38 750.6 KB
ENCFF168DFB.bigBed bigBed (peaks); assembly: GRCh38 1.8 MB
ENCFF188QPT.bigBed bigBed (peaks); assembly: GRCh38 466.2 KB
ENCFF238BOS.fastq fastq (reads) 456.2 MB
ENCFF241EWR.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 6.2 MB
ENCFF262GIM.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 5.9 MB
ENCFF263FVL.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF301IKV.bam bam (alignments); assembly: hg19 197.5 MB
ENCFF413RCX.fastq fastq (reads) 539.4 MB
ENCFF430GFT.bigBed bigBed (peaks); assembly: hg19 1.8 MB
ENCFF445FRC.bam bam (alignments); assembly: GRCh38 125.3 MB
ENCFF466HOC.bed bed (peaks); assembly: GRCh38 185.0 KB
ENCFF485NXM.bed bed (peaks); assembly: hg19 22.1 KB
ENCFF507AKH.bed bed (peaks); assembly: hg19 1.0 MB
ENCFF510RNY.fastq fastq (reads) 465.9 MB
ENCFF513KIB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 8.3 MB
ENCFF601SZL.bed bed (peaks); assembly: hg19 465.0 KB
ENCFF634UAJ.bed bed (peaks); assembly: hg19 789.7 KB
ENCFF642SST.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 5.8 MB
ENCFF643ZIN.bigBed bigBed (peaks); assembly: GRCh38 378.9 KB
ENCFF687ZTQ.bigBed bigBed (peaks); assembly: hg19 1019.5 KB
ENCFF697MVO.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 7.9 MB
ENCFF746LFQ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 8.1 MB
ENCFF803KPC.bed bed (peaks); assembly: GRCh38 1.0 MB
ENCFF845MNN.bam bam (alignments); assembly: GRCh38 191.4 MB
ENCFF846CJI.bam bam (alignments); assembly: hg19 134.3 MB
ENCFF888NHP.bigBed bigBed (peaks); assembly: hg19 956.8 KB
ENCFF907ZFN.bed bed (peaks); assembly: GRCh38 173.4 KB
ENCSR057DWB ENCSR via encode_api

eCLIP experiment on K562 against TIA1

Homo sapiens
38 data files
FileTypeSize
ENCFF014QCP.bigBed bigBed (peaks); assembly: GRCh38 915.4 KB
ENCFF017ZEM.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 34.2 MB
ENCFF031JPO.bigBed bigBed (peaks); assembly: GRCh38 6.6 MB
ENCFF080VML.bam bam (alignments); assembly: GRCh38 564.1 MB
ENCFF093IND.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 30.5 MB
ENCFF125CWQ.bigBed bigBed (peaks); assembly: GRCh38 5.9 MB
ENCFF202HXA.bigBed bigBed (peaks); assembly: hg19 5.9 MB
ENCFF248YBJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 32.1 MB
ENCFF262IWZ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 36.0 MB
ENCFF298ZAG.bed bed (peaks); assembly: hg19 127.2 KB
ENCFF306GFY.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF314LSF.bam bam (alignments); assembly: hg19 573.2 MB
ENCFF319KAF.bam bam (alignments); assembly: hg19 682.7 MB
ENCFF331OSU.bed bed (peaks); assembly: hg19 1.0 MB
ENCFF348TPU.bed bed (peaks); assembly: GRCh38 3.6 MB
ENCFF399NDL.bigBed bigBed (peaks); assembly: hg19 6.5 MB
ENCFF442UPB.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF459AMC.bed bed (peaks); assembly: GRCh38 389.3 KB
ENCFF477IOM.bed bed (peaks); assembly: hg19 986.0 KB
ENCFF499XGJ.bigBed bigBed (peaks); assembly: GRCh38 984.6 KB
ENCFF509PKA.bed bed (peaks); assembly: hg19 3.2 MB
ENCFF581EBE.bam bam (alignments); assembly: GRCh38 672.5 MB
ENCFF604VPQ.fastq fastq (reads) 662.5 MB
ENCFF635GJU.bed bed (peaks); assembly: hg19 935.2 KB
ENCFF673MNH.bed bed (peaks); assembly: hg19 3.6 MB
ENCFF674TKN.bed bed (peaks); assembly: GRCh38 3.2 MB
ENCFF710AFX.fastq fastq (reads) 647.2 MB
ENCFF769OYZ.bigBed bigBed (peaks); assembly: hg19 2.1 MB
ENCFF782ZMF.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 35.6 MB
ENCFF794KQT.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 30.6 MB
ENCFF820BWG.fastq fastq (reads) 611.9 MB
ENCFF827ZJE.bed bed (peaks); assembly: GRCh38 433.7 KB
ENCFF871ZLL.bam bam (alignments); assembly: hg19 573.2 MB
ENCFF873ZAY.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 34.0 MB
ENCFF893QVN.fastq fastq (reads) 645.8 MB
ENCFF900OHV.bam bam (alignments); assembly: hg19 682.7 MB
ENCFF918KMT.bed bed (peaks); assembly: GRCh38 128.0 KB
ENCFF940BFP.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 31.8 MB
ENCSR490IEE ENCSR via encode_api

eCLIP experiment on HepG2 against UCHL5

Homo sapiens
36 data files
FileTypeSize
ENCFF007BPN.fastq fastq (reads) 583.5 MB
ENCFF012CKH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 44.2 MB
ENCFF022FGD.bed bed (peaks); assembly: GRCh38 3.3 MB
ENCFF022GSG.bigBed bigBed (peaks); assembly: hg19 4.8 MB
ENCFF050OHC.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 43.9 MB
ENCFF063XSO.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 30.2 MB
ENCFF101IOW.fastq fastq (reads) 1.0 GB
ENCFF111XBR.bigBed bigBed (peaks); assembly: GRCh38 964.0 KB
ENCFF132YAO.bam bam (alignments); assembly: GRCh38 1.0 GB
ENCFF156QCZ.bed bed (peaks); assembly: GRCh38 401.2 KB
ENCFF171KTG.bed bed (peaks); assembly: hg19 2.4 MB
ENCFF225TVX.bigBed bigBed (peaks); assembly: hg19 3.0 MB
ENCFF226OLL.bigBed bigBed (peaks); assembly: GRCh38 4.8 MB
ENCFF269VTE.bigBed bigBed (peaks); assembly: hg19 5.2 MB
ENCFF305LRB.bed bed (peaks); assembly: hg19 3.3 MB
ENCFF322VWH.fastq fastq (reads) 981.2 MB
ENCFF391KVJ.bed bed (peaks); assembly: hg19 48.0 KB
ENCFF473ZYA.bigBed bigBed (peaks); assembly: hg19 5.7 MB
ENCFF476CPQ.bam bam (alignments); assembly: GRCh38 654.9 MB
ENCFF573DXD.bed bed (peaks); assembly: GRCh38 50.4 KB
ENCFF573KHP.bed bed (peaks); assembly: GRCh38 2.4 MB
ENCFF619QWB.bed bed (peaks); assembly: GRCh38 466.3 KB
ENCFF623ENV.bed bed (peaks); assembly: hg19 1.5 MB
ENCFF642XMP.bam bam (alignments); assembly: hg19 1.0 GB
ENCFF671VFZ.bam bam (alignments); assembly: hg19 687.1 MB
ENCFF677SWL.bed bed (peaks); assembly: hg19 1.3 MB
ENCFF704AZS.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 43.1 MB
ENCFF769IXL.fastq fastq (reads) 620.7 MB
ENCFF769QQG.bigBed bigBed (peaks); assembly: hg19 6.1 MB
ENCFF776ICY.bigBed bigBed (peaks); assembly: GRCh38 1.0 MB
ENCFF887BFF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 30.3 MB
ENCFF907DUD.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 31.3 MB
ENCFF958DHS.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 45.1 MB
ENCFF975XTM.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 29.3 MB
ENCFF992CXW.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF994NUD.bigBed bigBed (peaks); assembly: GRCh38 6.1 MB
ENCSR291XPT ENCSR via encode_api

eCLIP experiment on K562 against PUS1

Homo sapiens
34 data files
FileTypeSize
ENCFF049SUS.fastq fastq (reads) 689.4 MB
ENCFF053SPH.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.0 MB
ENCFF064GVD.bigBed bigBed (peaks); assembly: GRCh38 389.1 KB
ENCFF098UHH.bam bam (alignments); assembly: GRCh38 166.7 MB
ENCFF129INC.bigBed bigBed (peaks); assembly: GRCh38 1.3 MB
ENCFF236ACF.bigBed bigBed (peaks); assembly: hg19 713.7 KB
ENCFF247NXL.bed bed (peaks); assembly: GRCh38 895.0 B
ENCFF256TFB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 2.6 MB
ENCFF268XIE.bed bed (peaks); assembly: hg19 770.9 KB
ENCFF318MQO.bed bed (peaks); assembly: hg19 330.7 KB
ENCFF320HAD.fastq fastq (reads) 751.0 MB
ENCFF334MWZ.bam bam (alignments); assembly: hg19 47.1 MB
ENCFF389JHH.bed bed (peaks); assembly: GRCh38 183.7 KB
ENCFF459KBL.bigBed bigBed (peaks); assembly: GRCh38 334.1 KB
ENCFF470JIH.bed bed (peaks); assembly: hg19 657.0 B
ENCFF479SQA.fastq fastq (reads) 225.8 MB
ENCFF489AEX.bam bam (alignments); assembly: hg19 174.0 MB
ENCFF509ACI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.7 MB
ENCFF552FLR.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 2.7 MB
ENCFF560YRG.bed bed (peaks); assembly: GRCh38 68.3 KB
ENCFF567WPT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 2.7 MB
ENCFF603CDW.bigBed bigBed (peaks); assembly: hg19 1.4 MB
ENCFF644LCK.bigBed bigBed (peaks); assembly: GRCh38 212.8 KB
ENCFF713FGP.bed bed (peaks); assembly: hg19 151.7 KB
ENCFF761HNN.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 2.5 MB
ENCFF824TUZ.bam bam (alignments); assembly: GRCh38 45.9 MB
ENCFF877UIT.bigBed bigBed (peaks); assembly: hg19 394.7 KB
ENCFF883KAB.bigBed bigBed (peaks); assembly: hg19 349.5 KB
ENCFF904FWY.bed bed (peaks); assembly: GRCh38 741.1 KB
ENCFF906EMD.fastq fastq (reads) 206.6 MB
ENCFF908YJN.bed bed (peaks); assembly: GRCh38 116.0 KB
ENCFF951UFE.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.6 MB
ENCFF985YQV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.2 MB
ENCFF990JXJ.bed bed (peaks); assembly: hg19 187.9 KB
ENCSR543TPH ENCSR via encode_api

eCLIP experiment on HepG2 against AGGF1

Homo sapiens
36 data files
FileTypeSize
ENCFF031POH.bigBed bigBed (peaks) 3.7 MB
ENCFF036HIA.bam bam (alignments) 695.0 MB
ENCFF061KAN.bigWig bigWig (minus strand signal of unique reads) 29.8 MB
ENCFF082GTJ.bigWig bigWig (minus strand signal of unique reads) 22.4 MB
ENCFF105HLG.bigWig bigWig (minus strand signal of unique reads) 28.8 MB
ENCFF139PUX.fastq fastq (reads) 574.5 MB
ENCFF164QUS.fastq fastq (reads) 705.6 MB
ENCFF208VFO.fastq fastq (reads) 660.1 MB
ENCFF214URR.bed bed (peaks) 908.2 KB
ENCFF217AOH.bigWig bigWig (plus strand signal of unique reads) 29.8 MB
ENCFF220HXJ.bigBed bigBed (peaks) 3.0 MB
ENCFF249CVU.bam bam (alignments) 533.8 MB
ENCFF273EAT.bigBed bigBed (peaks) 3.8 MB
ENCFF283MCJ.bed bed (peaks) 1.9 MB
ENCFF302BJD.bam bam (alignments) 664.1 MB
ENCFF306RCT.bigBed bigBed (peaks) 1.9 MB
ENCFF388PDG.bed bed (peaks) 2.8 MB
ENCFF410IYU.bigBed bigBed (peaks) 1.4 MB
ENCFF590RYI.bigWig bigWig (plus strand signal of unique reads) 30.9 MB
ENCFF617LAH.bed bed (peaks) 89.7 KB
ENCFF631WSW.bed bed (peaks) 296.8 KB
ENCFF632ZWR.bigBed bigBed (peaks) 5.3 MB
ENCFF654QLO.bed bed (peaks) 208.8 KB
ENCFF657LSN.bigWig bigWig (plus strand signal of unique reads) 22.9 MB
ENCFF673EQX.bed bed (peaks) 2.7 MB
ENCFF689ZAK.bed bed (peaks) 671.5 KB
ENCFF737WJV.bigBed bigBed (peaks) 2.3 MB
ENCFF738HMR.bigWig bigWig (minus strand signal of unique reads) 23.6 MB
ENCFF752CZC.bigBed bigBed (peaks) 485.4 KB
ENCFF860RNX.bigBed bigBed (peaks) 5.4 MB
ENCFF936QKU.bed bed (peaks) 1.8 MB
ENCFF939TIW.bigBed bigBed (peaks) 631.5 KB
ENCFF948TWD.bam bam (alignments) 564.5 MB
ENCFF958HKG.fastq fastq (reads) 612.9 MB
ENCFF992LCW.bed bed (peaks) 90.4 KB
ENCFF995SUK.bigWig bigWig (plus strand signal of unique reads) 24.1 MB
ENCSR820WHR ENCSR via encode_api

eCLIP experiment on HepG2 against POLR2G

Homo sapiens
28 data files
FileTypeSize
ENCFF004PFP.bed bed (peaks) 383.8 KB
ENCFF014MZO.bed bed (peaks) 1.5 KB
ENCFF042CEP.bigWig bigWig (plus strand signal of unique reads) 17.8 MB
ENCFF045AEV.bed bed (peaks) 1.9 MB
ENCFF048PAF.bigWig bigWig (plus strand signal of unique reads) 14.0 MB
ENCFF061RCA.bigWig bigWig (plus strand signal of unique reads) 18.1 MB
ENCFF079ZKD.bed bed (peaks) 1.4 MB
ENCFF086EHM.fastq fastq (reads) 530.8 MB
ENCFF184PPV.bigWig bigWig (minus strand signal of unique reads) 17.4 MB
ENCFF199INE.bigBed bigBed (peaks) 2.3 MB
ENCFF219FAE.fastq fastq (reads) 529.7 MB
ENCFF290GPH.bigBed bigBed (peaks) 2.9 MB
ENCFF365BHW.bigWig bigWig (plus strand signal of unique reads) 14.3 MB
ENCFF385AIL.bam bam (alignments) 254.6 MB
ENCFF429JCN.bam bam (alignments) 262.9 MB
ENCFF460SKC.bam bam (alignments) 339.6 MB
ENCFF486DVN.bed bed (peaks) 414.1 KB
ENCFF497VHY.fastq fastq (reads) 518.4 MB
ENCFF527HFU.bigBed bigBed (peaks) 2.9 MB
ENCFF544TEP.bigWig bigWig (minus strand signal of unique reads) 13.4 MB
ENCFF591BUK.bed bed (peaks) 1.5 KB
ENCFF624BGB.bigWig bigWig (minus strand signal of unique reads) 17.2 MB
ENCFF635IBM.bed bed (peaks) 1.9 MB
ENCFF749CYD.bed bed (peaks) 1.4 MB
ENCFF760EDL.bigBed bigBed (peaks) 2.2 MB
ENCFF783TNF.bam bam (alignments) 346.3 MB
ENCFF865UYY.fastq fastq (reads) 512.3 MB
ENCFF983IBZ.bigWig bigWig (minus strand signal of unique reads) 13.7 MB
ENCSR351PVI ENCSR via encode_api

eCLIP experiment on HepG2 against SLTM

Homo sapiens
36 data files
FileTypeSize
ENCFF021KOR.bam bam (alignments) 358.4 MB
ENCFF040YXD.bigBed bigBed (peaks) 634.8 KB
ENCFF049EQG.bed bed (peaks) 547.8 KB
ENCFF065END.fastq fastq (reads) 231.6 MB
ENCFF076LTL.bed bed (peaks) 102.9 KB
ENCFF082MTD.bigWig bigWig (plus strand signal of unique reads) 20.6 MB
ENCFF083YUQ.bigBed bigBed (peaks) 1.9 MB
ENCFF086FAD.bigWig bigWig (minus strand signal of unique reads) 20.2 MB
ENCFF105HLP.bigWig bigWig (minus strand signal of unique reads) 20.1 MB
ENCFF121RVH.bed bed (peaks) 27.0 KB
ENCFF125BHF.bam bam (alignments) 143.1 MB
ENCFF142LPF.fastq fastq (reads) 239.2 MB
ENCFF201XIY.bam bam (alignments) 142.0 MB
ENCFF208JVP.fastq fastq (reads) 290.4 MB
ENCFF214GAX.bigBed bigBed (peaks) 3.3 MB
ENCFF233GXU.bigBed bigBed (peaks) 266.5 KB
ENCFF241UUY.bigBed bigBed (peaks) 1.2 MB
ENCFF364FAX.bigBed bigBed (peaks) 1.2 MB
ENCFF447RUX.bigWig bigWig (plus strand signal of unique reads) 7.7 MB
ENCFF487JJR.bigBed bigBed (peaks) 1.3 MB
ENCFF510GIR.bigBed bigBed (peaks) 3.3 MB
ENCFF613KGS.bigWig bigWig (plus strand signal of unique reads) 20.7 MB
ENCFF629HGT.bigWig bigWig (minus strand signal of unique reads) 7.5 MB
ENCFF636UAR.bigBed bigBed (peaks) 1.3 MB
ENCFF637CLF.bigBed bigBed (peaks) 543.3 KB
ENCFF663JSG.bigWig bigWig (minus strand signal of unique reads) 7.5 MB
ENCFF725FNJ.bed bed (peaks) 761.1 KB
ENCFF736YMC.bam bam (alignments) 361.6 MB
ENCFF836HBV.bed bed (peaks) 196.3 KB
ENCFF837ZOX.bed bed (peaks) 27.9 KB
ENCFF870XZV.bed bed (peaks) 760.8 KB
ENCFF892IWC.bed bed (peaks) 1.7 MB
ENCFF957GRM.bed bed (peaks) 1.7 MB
ENCFF958NRC.fastq fastq (reads) 280.4 MB
ENCFF972AEX.bed bed (peaks) 276.1 KB
ENCFF991OLB.bigWig bigWig (plus strand signal of unique reads) 7.7 MB
ENCSR641PRC ENCSR via encode_api

eCLIP control experiment on HepG2 against SUB1

Homo sapiens
8 data files
FileTypeSize
ENCFF184TPS.bigWig bigWig (plus strand signal of unique reads) 11.1 MB
ENCFF298VBU.bigWig bigWig (minus strand signal of unique reads) 10.7 MB
ENCFF402KQE.bam bam (alignments) 210.5 MB
ENCFF511JHV.bigWig bigWig (plus strand signal of unique reads) 11.0 MB
ENCFF694OPV.bigWig bigWig (minus strand signal of unique reads) 10.6 MB
ENCFF723IPF.bam bam (alignments) 211.6 MB
ENCFF838LHV.fastq fastq (reads) 660.1 MB
ENCFF988APT.fastq fastq (reads) 619.5 MB
ENCSR438XYI ENCSR via encode_api

eCLIP control experiment on HepG2 against MATR3

Homo sapiens
8 data files
FileTypeSize
ENCFF198CUU.bigWig bigWig (minus strand signal of unique reads) 23.4 MB
ENCFF226MDW.bigWig bigWig (minus strand signal of unique reads) 22.9 MB
ENCFF296CLI.bigWig bigWig (plus strand signal of unique reads) 23.6 MB
ENCFF396MHA.fastq fastq (reads) 521.0 MB
ENCFF480VLX.fastq fastq (reads) 480.5 MB
ENCFF790VFN.bam bam (alignments) 512.9 MB
ENCFF794ILP.bam bam (alignments) 526.1 MB
ENCFF893NBT.bigWig bigWig (plus strand signal of unique reads) 22.9 MB
ENCSR513UTE ENCSR via encode_api

eCLIP control experiment on HepG2 against HNRNPL

Homo sapiens
8 data files
FileTypeSize
ENCFF139YRQ.bam bam (alignments) 679.6 MB
ENCFF255EGS.bam bam (alignments) 691.3 MB
ENCFF375ZHC.fastq fastq (reads) 796.9 MB
ENCFF530ZIY.bigWig bigWig (minus strand signal of unique reads) 31.0 MB
ENCFF676LYW.fastq fastq (reads) 723.6 MB
ENCFF751YCQ.bigWig bigWig (plus strand signal of unique reads) 31.1 MB
ENCFF843CKP.bigWig bigWig (minus strand signal of unique reads) 30.2 MB
ENCFF909QTN.bigWig bigWig (plus strand signal of unique reads) 31.5 MB
ENCSR321GBR ENCSR via encode_api

eCLIP control experiment on K562 against ZC3H11A

Homo sapiens
8 data files
FileTypeSize
ENCFF177WFE.bigWig bigWig (minus strand signal of unique reads) 21.2 MB
ENCFF227WPB.bigWig bigWig (plus strand signal of unique reads) 21.9 MB
ENCFF394SQZ.fastq fastq (reads) 721.0 MB
ENCFF489FQK.bigWig bigWig (minus strand signal of unique reads) 21.6 MB
ENCFF610DOP.bam bam (alignments) 493.8 MB
ENCFF713XZZ.bam bam (alignments) 481.3 MB
ENCFF721JZR.fastq fastq (reads) 703.2 MB
ENCFF958DFY.bigWig bigWig (plus strand signal of unique reads) 22.4 MB
ENCSR411IMJ ENCSR via encode_api

eCLIP control experiment on K562 against FXR2

Homo sapiens
8 data files
FileTypeSize
ENCFF161OXR.bam bam (alignments) 198.7 MB
ENCFF277PAA.fastq fastq (reads) 338.1 MB
ENCFF331TPL.bigWig bigWig (minus strand signal of unique reads) 11.8 MB
ENCFF410ICZ.bigWig bigWig (minus strand signal of unique reads) 11.9 MB
ENCFF497DMS.bam bam (alignments) 199.8 MB
ENCFF508IIT.fastq fastq (reads) 323.7 MB
ENCFF702MEX.bigWig bigWig (plus strand signal of unique reads) 12.3 MB
ENCFF717CBD.bigWig bigWig (plus strand signal of unique reads) 12.4 MB
ENCSR869TOB ENCSR via encode_api

eCLIP control experiment on K562 against PUS1

Homo sapiens
8 data files
FileTypeSize
ENCFF283DWL.bam bam (alignments) 370.0 MB
ENCFF292NQE.bam bam (alignments) 374.9 MB
ENCFF339KXC.fastq fastq (reads) 694.2 MB
ENCFF428CCS.bigWig bigWig (minus strand signal of unique reads) 17.2 MB
ENCFF497CCO.bigWig bigWig (plus strand signal of unique reads) 17.9 MB
ENCFF555JVP.bigWig bigWig (minus strand signal of unique reads) 17.5 MB
ENCFF586BVD.fastq fastq (reads) 665.5 MB
ENCFF683XOT.bigWig bigWig (plus strand signal of unique reads) 18.2 MB
ENCSR751CSY ENCSR via encode_api

eCLIP control experiment on K562 against UCHL5

Homo sapiens
8 data files
FileTypeSize
ENCFF156RQC.bigWig bigWig (minus strand signal of unique reads) 34.8 MB
ENCFF156WVL.bam bam (alignments) 769.2 MB
ENCFF434XME.fastq fastq (reads) 977.5 MB
ENCFF544QCC.bigWig bigWig (plus strand signal of unique reads) 36.8 MB
ENCFF545RPT.fastq fastq (reads) 874.5 MB
ENCFF620KOF.bigWig bigWig (minus strand signal of unique reads) 35.5 MB
ENCFF886HUH.bam bam (alignments) 758.2 MB
ENCFF980ZKW.bigWig bigWig (plus strand signal of unique reads) 36.1 MB
ENCSR125CLF ENCSR via encode_api

eCLIP control experiment on K562 against IGF2BP1

Homo sapiens
8 data files
FileTypeSize
ENCFF187LSM.bigWig bigWig (minus strand signal of unique reads) 7.2 MB
ENCFF347HAW.bigWig bigWig (plus strand signal of unique reads) 9.9 MB
ENCFF425DPU.bam bam (alignments) 173.8 MB
ENCFF592FNJ.fastq fastq (reads) 251.6 MB
ENCFF609BRP.bigWig bigWig (plus strand signal of unique reads) 10.0 MB
ENCFF672RWL.fastq fastq (reads) 244.8 MB
ENCFF828HOS.bigWig bigWig (minus strand signal of unique reads) 7.2 MB
ENCFF982JPX.bam bam (alignments) 174.7 MB
ENCSR863ZGZ ENCSR via encode_api

eCLIP control experiment on K562 against LARP7

Homo sapiens
8 data files
FileTypeSize
ENCFF085TYL.bigWig bigWig (plus strand signal of unique reads) 15.7 MB
ENCFF351JZY.bigWig bigWig (minus strand signal of unique reads) 15.1 MB
ENCFF476ASR.fastq fastq (reads) 436.6 MB
ENCFF480XFE.bigWig bigWig (plus strand signal of unique reads) 15.7 MB
ENCFF487BLB.bam bam (alignments) 299.5 MB
ENCFF699GNU.bam bam (alignments) 299.3 MB
ENCFF967IQR.fastq fastq (reads) 428.0 MB
ENCFF987WXS.bigWig bigWig (minus strand signal of unique reads) 15.1 MB
ENCSR651NUF ENCSR via encode_api

eCLIP control experiment on K562 against EIF4G2

Homo sapiens
8 data files
FileTypeSize
ENCFF009NZR.bigWig bigWig (plus strand signal of unique reads) 19.4 MB
ENCFF013DLR.fastq fastq (reads) 529.1 MB
ENCFF380JNI.bigWig bigWig (minus strand signal of unique reads) 18.9 MB
ENCFF425TFV.bigWig bigWig (plus strand signal of unique reads) 19.5 MB
ENCFF467NGI.bigWig bigWig (minus strand signal of unique reads) 18.7 MB
ENCFF551LIR.bam bam (alignments) 327.8 MB
ENCFF566LOT.fastq fastq (reads) 515.1 MB
ENCFF956SAT.bam bam (alignments) 328.6 MB
ENCSR820GBM ENCSR via encode_api

eCLIP control experiment on K562 against SLTM

Homo sapiens
8 data files
FileTypeSize
ENCFF048VBN.bam bam (alignments); assembly: GRCh38 391.9 MB
ENCFF076TJQ.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 22.5 MB
ENCFF266KVU.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 23.2 MB
ENCFF266WBL.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 22.8 MB
ENCFF457TVS.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 23.4 MB
ENCFF699JUE.fastq fastq (reads) 492.9 MB
ENCFF864EZE.fastq fastq (reads) 510.2 MB
ENCFF869ACG.bam bam (alignments); assembly: hg19 390.3 MB
ENCSR438KWZ ENCSR via encode_api

eCLIP experiment on K562 against ILF3

Homo sapiens
36 data files
FileTypeSize
ENCFF026RUN.bigBed bigBed (peaks) 4.8 MB
ENCFF040WMA.bigBed bigBed (peaks) 1.9 MB
ENCFF062BOK.bigWig bigWig (minus strand signal of unique reads) 27.0 MB
ENCFF098RFI.bam bam (alignments) 655.7 MB
ENCFF244WAP.bigWig bigWig (plus strand signal of unique reads) 28.5 MB
ENCFF256BBJ.bed bed (peaks) 571.2 KB
ENCFF271DXJ.bigWig bigWig (minus strand signal of unique reads) 30.2 MB
ENCFF302RDD.bigBed bigBed (peaks) 4.8 MB
ENCFF353RQP.bed bed (peaks) 2.6 MB
ENCFF370GDB.bed bed (peaks) 63.3 KB
ENCFF379UOT.bigBed bigBed (peaks) 1.7 MB
ENCFF385MJU.bed bed (peaks) 63.0 KB
ENCFF412NAX.fastq fastq (reads) 444.8 MB
ENCFF415JAG.bam bam (alignments) 567.4 MB
ENCFF417LIC.bigBed bigBed (peaks) 5.5 MB
ENCFF526EKC.fastq fastq (reads) 466.4 MB
ENCFF566ACZ.bigBed bigBed (peaks) 572.4 KB
ENCFF585YOO.fastq fastq (reads) 428.6 MB
ENCFF587ENP.bigWig bigWig (minus strand signal of unique reads) 27.2 MB
ENCFF591IKM.bed bed (peaks) 178.5 KB
ENCFF599CNJ.bigBed bigBed (peaks) 1.1 MB
ENCFF623LPT.bed bed (peaks) 3.0 MB
ENCFF635JLZ.bigWig bigWig (plus strand signal of unique reads) 28.3 MB
ENCFF654XEU.bigBed bigBed (peaks) 5.4 MB
ENCFF670QMD.bed bed (peaks) 214.5 KB
ENCFF676EJB.bigWig bigWig (plus strand signal of unique reads) 31.7 MB
ENCFF814ZTD.bigWig bigWig (minus strand signal of unique reads) 30.0 MB
ENCFF821QFO.bed bed (peaks) 2.6 MB
ENCFF824RQD.fastq fastq (reads) 484.3 MB
ENCFF831OQK.bigWig bigWig (plus strand signal of unique reads) 31.5 MB
ENCFF857MJR.bed bed (peaks) 3.0 MB
ENCFF889XJU.bam bam (alignments) 562.2 MB
ENCFF905QUI.bigBed bigBed (peaks) 499.2 KB
ENCFF942IEZ.bigBed bigBed (peaks) 1.2 MB
ENCFF958RKH.bam bam (alignments) 661.9 MB
ENCFF996VIT.bed bed (peaks) 485.1 KB
ENCSR406OOZ ENCSR via encode_api

eCLIP experiment on HepG2 against SUB1

Homo sapiens
34 data files
FileTypeSize
ENCFF017WSJ.bigBed bigBed (peaks) 1.4 MB
ENCFF033IXH.bed bed (peaks) 944.2 KB
ENCFF061KCU.bigBed bigBed (peaks) 749.6 KB
ENCFF098VAP.bigWig bigWig (minus strand signal of unique reads) 4.1 MB
ENCFF136QVH.bed bed (peaks) 341.9 KB
ENCFF178PSK.bigBed bigBed (peaks) 1.4 MB
ENCFF211CBI.bigWig bigWig (plus strand signal of unique reads) 4.2 MB
ENCFF228FAK.bam bam (alignments) 79.0 MB
ENCFF277RZH.bed bed (peaks) 753.6 KB
ENCFF335JTC.bed bed (peaks) 75.7 KB
ENCFF400IPB.bigBed bigBed (peaks) 1.6 MB
ENCFF401JKW.bigBed bigBed (peaks) 1.6 MB
ENCFF416HFS.bam bam (alignments) 78.1 MB
ENCFF443VTY.bed bed (peaks) 809.2 KB
ENCFF457GXO.fastq fastq (reads) 464.7 MB
ENCFF470VNT.bigWig bigWig (plus strand signal of unique reads) 4.1 MB
ENCFF510KUY.bed bed (peaks) 77.9 KB
ENCFF513BPQ.fastq fastq (reads) 489.8 MB
ENCFF514FZF.bigWig bigWig (minus strand signal of unique reads) 4.1 MB
ENCFF514SOO.fastq fastq (reads) 689.1 MB
ENCFF564EGL.bed bed (peaks) 839.1 KB
ENCFF606GDB.bed bed (peaks) 374.7 KB
ENCFF630HUR.bigBed bigBed (peaks) 1.5 MB
ENCFF702PLE.bigBed bigBed (peaks) 1.5 MB
ENCFF719WCP.bigWig bigWig (plus strand signal of unique reads) 4.3 MB
ENCFF762NHP.bigWig bigWig (minus strand signal of unique reads) 4.1 MB
ENCFF790BKB.bed bed (peaks) 936.0 KB
ENCFF811LOQ.fastq fastq (reads) 643.8 MB
ENCFF830DRY.bigWig bigWig (plus strand signal of unique reads) 4.2 MB
ENCFF908VRY.bam bam (alignments) 83.5 MB
ENCFF974INA.bigWig bigWig (minus strand signal of unique reads) 4.2 MB
ENCFF978MMK.bed bed (peaks) 836.0 KB
ENCFF983TVE.bigBed bigBed (peaks) 813.2 KB
ENCFF994CFH.bam bam (alignments) 80.0 MB
ENCSR278BZH ENCSR via encode_api

eCLIP control experiment on HepG2 against NOLC1

Homo sapiens
8 data files
FileTypeSize
ENCFF094LAU.bigWig bigWig (plus strand signal of unique reads) 25.0 MB
ENCFF134DMB.fastq fastq (reads) 776.3 MB
ENCFF200IHY.fastq fastq (reads) 807.5 MB
ENCFF221KHG.bam bam (alignments) 543.4 MB
ENCFF694SYB.bigWig bigWig (plus strand signal of unique reads) 25.4 MB
ENCFF793GFK.bigWig bigWig (minus strand signal of unique reads) 24.6 MB
ENCFF852DRN.bam bam (alignments) 553.2 MB
ENCFF884FUD.bigWig bigWig (minus strand signal of unique reads) 24.2 MB
ENCSR454EER ENCSR via encode_api

eCLIP control experiment on K562 against RBM15

Homo sapiens
8 data files
FileTypeSize
ENCFF078XFM.bigWig bigWig (plus strand signal of unique reads) 19.5 MB
ENCFF301ZAC.bigWig bigWig (minus strand signal of unique reads) 18.9 MB
ENCFF413OBS.bam bam (alignments) 392.7 MB
ENCFF584YFH.fastq fastq (reads) 515.7 MB
ENCFF697LPT.bam bam (alignments) 408.8 MB
ENCFF890YWF.bigWig bigWig (minus strand signal of unique reads) 19.8 MB
ENCFF933ORH.fastq fastq (reads) 492.3 MB
ENCFF939CDY.bigWig bigWig (plus strand signal of unique reads) 20.4 MB
ENCSR192PUP ENCSR via encode_api

eCLIP control experiment on HepG2 against LARP4

Homo sapiens
8 data files
FileTypeSize
ENCFF234DAV.bam bam (alignments) 565.2 MB
ENCFF234QFN.bigWig bigWig (plus strand signal of unique reads) 26.0 MB
ENCFF337XDN.bigWig bigWig (minus strand signal of unique reads) 25.6 MB
ENCFF460IZX.bigWig bigWig (minus strand signal of unique reads) 25.8 MB
ENCFF512AHQ.fastq fastq (reads) 561.7 MB
ENCFF649CHF.fastq fastq (reads) 533.0 MB
ENCFF856VFR.bigWig bigWig (plus strand signal of unique reads) 26.2 MB
ENCFF881RZM.bam bam (alignments) 569.9 MB
ENCSR993FMY ENCSR via encode_api

eCLIP experiment on HepG2 against TROVE2

Homo sapiens
36 data files
FileTypeSize
ENCFF029CYV.bed bed (peaks) 1.6 MB
ENCFF049UNM.fastq fastq (reads) 594.8 MB
ENCFF124ZON.bed bed (peaks) 1.9 MB
ENCFF154QAS.bigBed bigBed (peaks) 3.1 MB
ENCFF236UCB.bigWig bigWig (plus strand signal of unique reads) 20.0 MB
ENCFF305FNR.bam bam (alignments) 317.7 MB
ENCFF357SOW.bed bed (peaks) 422.1 KB
ENCFF371SYJ.bigWig bigWig (plus strand signal of unique reads) 21.8 MB
ENCFF373HXL.bigWig bigWig (plus strand signal of unique reads) 22.0 MB
ENCFF401RUI.bed bed (peaks) 1.7 MB
ENCFF425LQP.bigBed bigBed (peaks) 384.8 KB
ENCFF476NYI.fastq fastq (reads) 628.3 MB
ENCFF480INU.bigBed bigBed (peaks) 843.3 KB
ENCFF485HPD.bigWig bigWig (minus strand signal of unique reads) 19.2 MB
ENCFF490VDU.bigWig bigWig (minus strand signal of unique reads) 19.3 MB
ENCFF515SVK.bed bed (peaks) 1.9 MB
ENCFF518RWV.bigBed bigBed (peaks) 1.9 MB
ENCFF527CKN.bam bam (alignments) 385.2 MB
ENCFF551QMO.bed bed (peaks) 506.1 KB
ENCFF580PEL.bam bam (alignments) 313.8 MB
ENCFF611SOO.bed bed (peaks) 4.2 KB
ENCFF649XQE.bigBed bigBed (peaks) 2.7 MB
ENCFF681SRL.fastq fastq (reads) 629.6 MB
ENCFF728DBN.bigBed bigBed (peaks) 437.5 KB
ENCFF735GLT.bigBed bigBed (peaks) 2.7 MB
ENCFF763EMA.bed bed (peaks) 149.0 KB
ENCFF769CBK.bigWig bigWig (plus strand signal of unique reads) 19.8 MB
ENCFF813HZT.bed bed (peaks) 173.7 KB
ENCFF857CKQ.fastq fastq (reads) 676.9 MB
ENCFF876ONV.bam bam (alignments) 390.4 MB
ENCFF877QKG.bed bed (peaks) 4.2 KB
ENCFF919QBR.bigBed bigBed (peaks) 1.6 MB
ENCFF943FKR.bigBed bigBed (peaks) 992.2 KB
ENCFF959CKO.bigWig bigWig (minus strand signal of unique reads) 21.5 MB
ENCFF992LYC.bigWig bigWig (minus strand signal of unique reads) 21.4 MB
ENCFF998DQS.bigBed bigBed (peaks) 3.1 MB
ENCSR766FAC ENCSR via encode_api

eCLIP experiment on HepG2 against RPS3

Homo sapiens
29 data files
FileTypeSize
ENCFF048FYV.fastq fastq (reads) 627.1 MB
ENCFF055PDH.bam bam (alignments) 167.8 MB
ENCFF070BLX.bigWig bigWig (plus strand signal of unique reads) 7.1 MB
ENCFF150LAG.bigWig bigWig (minus strand signal of unique reads) 7.0 MB
ENCFF163XOB.bed bed (peaks) 797.5 KB
ENCFF167GCB.bigBed bigBed (peaks) 1.6 MB
ENCFF233HCD.bam bam (alignments) 151.5 MB
ENCFF251QTX.bed bed (peaks) 813.6 KB
ENCFF275HKC.bed bed (peaks) 778.4 KB
ENCFF293CYV.bigBed bigBed (peaks) 1.7 MB
ENCFF301IJW.bed bed (peaks) 135.2 KB
ENCFF310CSZ.bigWig bigWig (plus strand signal of unique reads) 7.3 MB
ENCFF368GUH.fastq fastq (reads) 497.7 MB
ENCFF435LHP.bigBed bigBed (peaks) 1.3 MB
ENCFF552YOF.bigWig bigWig (minus strand signal of unique reads) 7.1 MB
ENCFF562LNH.bed bed (peaks) 694.8 KB
ENCFF574FKW.fastq fastq (reads) 582.9 MB
ENCFF584APK.bigBed bigBed (peaks) 1.6 MB
ENCFF624UFQ.bigWig bigWig (minus strand signal of unique reads) 7.2 MB
ENCFF634IHJ.bam bam (alignments) 160.4 MB
ENCFF756GJP.bigWig bigWig (plus strand signal of unique reads) 7.3 MB
ENCFF766RBQ.bigWig bigWig (minus strand signal of unique reads) 6.9 MB
ENCFF843WBE.bed bed (peaks) 840.4 KB
ENCFF848LEJ.bigBed bigBed (peaks) 1.7 MB
ENCFF850KGS.fastq fastq (reads) 462.3 MB
ENCFF959SXJ.bam bam (alignments) 160.6 MB
ENCFF984MNA.bigWig bigWig (plus strand signal of unique reads) 7.1 MB
ENCFF985DTC.bed bed (peaks) 139.0 KB
ENCFF993QKG.bed bed (peaks) 653.2 KB
ENCSR834YLD ENCSR via encode_api

eCLIP experiment on HepG2 against DROSHA

Homo sapiens
30 data files
FileTypeSize
ENCFF023OZW.bigBed bigBed (peaks) 6.3 MB
ENCFF101QTP.bigWig bigWig (minus strand signal of unique reads) 26.1 MB
ENCFF110FOW.fastq fastq (reads) 787.9 MB
ENCFF110MMH.bed bed (peaks) 3.4 MB
ENCFF127OES.bigWig bigWig (plus strand signal of unique reads) 27.4 MB
ENCFF146RNO.bed bed (peaks) 3.4 MB
ENCFF146VLV.bigWig bigWig (minus strand signal of unique reads) 36.4 MB
ENCFF166TWT.bigBed bigBed (peaks) 5.8 MB
ENCFF190HNU.bam bam (alignments) 742.7 MB
ENCFF322CWI.bigWig bigWig (plus strand signal of unique reads) 27.7 MB
ENCFF370VET.bigWig bigWig (minus strand signal of unique reads) 36.0 MB
ENCFF392REB.bigBed bigBed (peaks) 1.3 MB
ENCFF401NJF.bam bam (alignments) 567.8 MB
ENCFF413DZP.bam bam (alignments) 733.3 MB
ENCFF473PFJ.bigWig bigWig (plus strand signal of unique reads) 36.3 MB
ENCFF484RCY.fastq fastq (reads) 841.0 MB
ENCFF548JFY.bed bed (peaks) 3.1 MB
ENCFF602SWL.bigBed bigBed (peaks) 1.6 MB
ENCFF624RZR.bed bed (peaks) 50.6 KB
ENCFF655WIT.bigBed bigBed (peaks) 6.4 MB
ENCFF673CDP.fastq fastq (reads) 995.4 MB
ENCFF674RKD.bigWig bigWig (plus strand signal of unique reads) 37.2 MB
ENCFF685BHL.bed bed (peaks) 604.2 KB
ENCFF744PVS.fastq fastq (reads) 1.0 GB
ENCFF773TOS.bam bam (alignments) 578.3 MB
ENCFF779CTU.bigBed bigBed (peaks) 5.8 MB
ENCFF806NCH.bed bed (peaks) 761.7 KB
ENCFF854BHP.bed bed (peaks) 52.7 KB
ENCFF897UHS.bigWig bigWig (minus strand signal of unique reads) 26.8 MB
ENCFF967UUI.bed bed (peaks) 3.1 MB
ENCSR121GQH ENCSR via encode_api

eCLIP experiment on K562 against SERBP1

Homo sapiens
34 data files
FileTypeSize
ENCFF007VAP.fastq fastq (reads) 360.0 MB
ENCFF058ORL.bed bed (peaks) 32.0 KB
ENCFF065ZBY.bed bed (peaks) 33.3 KB
ENCFF072GRP.bigWig bigWig (plus strand signal of unique reads) 991.8 KB
ENCFF083SYX.bigWig bigWig (plus strand signal of unique reads) 650.9 KB
ENCFF272WVO.bigWig bigWig (minus strand signal of unique reads) 460.8 KB
ENCFF287EUA.bam bam (alignments) 9.4 MB
ENCFF295HRZ.bed bed (peaks) 4.3 KB
ENCFF404ACO.bigWig bigWig (plus strand signal of unique reads) 997.7 KB
ENCFF405QJO.bed bed (peaks) 58.7 KB
ENCFF412TCD.fastq fastq (reads) 538.9 MB
ENCFF418FMB.bigWig bigWig (minus strand signal of unique reads) 937.5 KB
ENCFF457VMC.bigBed bigBed (peaks) 168.8 KB
ENCFF478QGG.bigBed bigBed (peaks) 176.0 KB
ENCFF619XEH.bigWig bigWig (plus strand signal of unique reads) 632.6 KB
ENCFF626HNR.bed bed (peaks) 33.9 KB
ENCFF628QLB.fastq fastq (reads) 322.4 MB
ENCFF648ONJ.bed bed (peaks) 21.3 KB
ENCFF682VXY.bigBed bigBed (peaks) 176.4 KB
ENCFF685GGU.bigBed bigBed (peaks) 147.6 KB
ENCFF690PXO.fastq fastq (reads) 469.4 MB
ENCFF710IZS.bed bed (peaks) 34.4 KB
ENCFF727HMM.bed bed (peaks) 4.0 KB
ENCFF762OZT.bigBed bigBed (peaks) 233.3 KB
ENCFF787NKL.bed bed (peaks) 58.8 KB
ENCFF802OIB.bigBed bigBed (peaks) 230.2 KB
ENCFF884YGW.bigBed bigBed (peaks) 235.5 KB
ENCFF902UZA.bigBed bigBed (peaks) 167.9 KB
ENCFF905IAJ.bigWig bigWig (minus strand signal of unique reads) 487.2 KB
ENCFF918RID.bam bam (alignments) 17.0 MB
ENCFF943MCZ.bam bam (alignments) 16.0 MB
ENCFF951GRM.bam bam (alignments) 8.5 MB
ENCFF963DCK.bigWig bigWig (minus strand signal of unique reads) 909.0 KB
ENCFF979XAE.bed bed (peaks) 60.6 KB
ENCSR930BZL ENCSR via encode_api

eCLIP experiment on K562 against DDX3X

Homo sapiens
36 data files
FileTypeSize
ENCFF017FYD.bigWig bigWig (minus strand signal of unique reads) 12.1 MB
ENCFF029BAQ.fastq fastq (reads) 378.2 MB
ENCFF039BKT.bed bed (peaks) 1.1 MB
ENCFF087MAJ.bed bed (peaks) 157.0 KB
ENCFF151JUK.fastq fastq (reads) 391.2 MB
ENCFF159TMA.bigWig bigWig (minus strand signal of unique reads) 8.8 MB
ENCFF188BJH.bam bam (alignments) 217.8 MB
ENCFF260CNL.bam bam (alignments) 198.9 MB
ENCFF272XGA.bed bed (peaks) 783.7 KB
ENCFF294VBN.bigWig bigWig (plus strand signal of unique reads) 12.5 MB
ENCFF343OME.bam bam (alignments) 191.3 MB
ENCFF346EYN.bigBed bigBed (peaks) 1.9 MB
ENCFF357NSP.fastq fastq (reads) 343.1 MB
ENCFF381YRZ.bed bed (peaks) 923.7 KB
ENCFF385QZV.bed bed (peaks) 770.4 KB
ENCFF432AKR.bigWig bigWig (plus strand signal of unique reads) 8.8 MB
ENCFF467TOC.bigWig bigWig (plus strand signal of unique reads) 9.1 MB
ENCFF483OBV.bed bed (peaks) 334.9 KB
ENCFF502YJV.bigWig bigWig (minus strand signal of unique reads) 12.3 MB
ENCFF565FNW.bigBed bigBed (peaks) 2.3 MB
ENCFF601TGO.bigBed bigBed (peaks) 2.3 MB
ENCFF667MXK.bed bed (peaks) 161.1 KB
ENCFF717JPQ.bigWig bigWig (plus strand signal of unique reads) 12.7 MB
ENCFF737NAW.bigBed bigBed (peaks) 2.8 MB
ENCFF737SOJ.bed bed (peaks) 929.4 KB
ENCFF762LWU.bigBed bigBed (peaks) 2.8 MB
ENCFF803EEU.bigBed bigBed (peaks) 1.9 MB
ENCFF818BXB.bigWig bigWig (minus strand signal of unique reads) 8.6 MB
ENCFF842AIM.bigBed bigBed (peaks) 1.6 MB
ENCFF854EXH.bigBed bigBed (peaks) 928.7 KB
ENCFF896YXV.bigBed bigBed (peaks) 1.6 MB
ENCFF901BYH.bed bed (peaks) 1.1 MB
ENCFF912NCS.bed bed (peaks) 397.8 KB
ENCFF943MML.fastq fastq (reads) 325.9 MB
ENCFF944DLO.bigBed bigBed (peaks) 814.9 KB
ENCFF969SMQ.bam bam (alignments) 212.0 MB
ENCSR445LJH ENCSR via encode_api

eCLIP control experiment on HepG2 against PPIG

Homo sapiens
8 data files
FileTypeSize
ENCFF112XIJ.bigWig bigWig (minus strand signal of unique reads) 28.3 MB
ENCFF228NIC.bam bam (alignments) 603.0 MB
ENCFF469MCT.fastq fastq (reads) 704.0 MB
ENCFF652DDU.bigWig bigWig (minus strand signal of unique reads) 27.6 MB
ENCFF774GNF.bam bam (alignments) 587.3 MB
ENCFF825NBG.fastq fastq (reads) 774.2 MB
ENCFF856LAP.bigWig bigWig (plus strand signal of unique reads) 29.0 MB
ENCFF954QHQ.bigWig bigWig (plus strand signal of unique reads) 28.3 MB
ENCSR298SAD ENCSR via encode_api

eCLIP control experiment on HepG2 against DGCR8

Homo sapiens
8 data files
FileTypeSize
ENCFF209NTM.bam bam (alignments) 419.5 MB
ENCFF225SLP.fastq fastq (reads) 376.0 MB
ENCFF673PHP.bigWig bigWig (minus strand signal of unique reads) 18.9 MB
ENCFF842EEC.bigWig bigWig (plus strand signal of unique reads) 19.7 MB
ENCFF869IBS.fastq fastq (reads) 428.1 MB
ENCFF883DQC.bam bam (alignments) 428.0 MB
ENCFF985AMT.bigWig bigWig (plus strand signal of unique reads) 19.4 MB
ENCFF997DNX.bigWig bigWig (minus strand signal of unique reads) 19.3 MB
ENCSR628IDK ENCSR via encode_api

eCLIP experiment on K562 against KHDRBS1

Homo sapiens
38 data files
FileTypeSize
ENCFF027UTH.bed bed (peaks); assembly: GRCh38 26.0 KB
ENCFF050ONU.bigBed bigBed (peaks); assembly: hg19 1.2 MB
ENCFF052ABQ.bed bed (peaks); assembly: hg19 3.7 MB
ENCFF090VQN.bed bed (peaks); assembly: hg19 493.0 KB
ENCFF104SYR.bigBed bigBed (peaks); assembly: GRCh38 566.9 KB
ENCFF124YKO.bed bed (peaks); assembly: hg19 26.5 KB
ENCFF134SUE.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 37.7 MB
ENCFF141IVW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 40.4 MB
ENCFF154ZDF.bigBed bigBed (peaks); assembly: GRCh38 456.2 KB
ENCFF164NCN.bigBed bigBed (peaks); assembly: hg19 6.1 MB
ENCFF167NEJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 41.5 MB
ENCFF214SWT.bed bed (peaks); assembly: GRCh38 3.7 MB
ENCFF228IEH.bigBed bigBed (peaks); assembly: hg19 1.9 MB
ENCFF289UZZ.fastq fastq (reads) 590.9 MB
ENCFF308KNI.bed bed (peaks); assembly: GRCh38 185.3 KB
ENCFF335DOX.bed bed (peaks); assembly: hg19 493.1 KB
ENCFF352QTY.bam bam (alignments); assembly: hg19 859.3 MB
ENCFF381KMI.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 41.1 MB
ENCFF388PCV.bigBed bigBed (peaks); assembly: GRCh38 6.5 MB
ENCFF390ANM.bed bed (peaks); assembly: hg19 3.4 MB
ENCFF406JXO.bed bed (peaks); assembly: GRCh38 208.9 KB
ENCFF412OIS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 38.4 MB
ENCFF564WBK.bed bed (peaks); assembly: hg19 541.5 KB
ENCFF577PBB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 38.6 MB
ENCFF603CPZ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 39.3 MB
ENCFF608WLW.bam bam (alignments); assembly: hg19 776.7 MB
ENCFF610VBL.bigBed bigBed (peaks); assembly: GRCh38 6.1 MB
ENCFF651RTO.fastq fastq (reads) 506.4 MB
ENCFF676NAG.fastq fastq (reads) 569.2 MB
ENCFF707HNB.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 40.8 MB
ENCFF733UTQ.bigBed bigBed (peaks); assembly: hg19 961.4 KB
ENCFF738QUP.bed bed (peaks); assembly: GRCh38 3.4 MB
ENCFF778POI.bam bam (alignments); assembly: GRCh38 842.3 MB
ENCFF787ROO.bam bam (alignments); assembly: GRCh38 759.8 MB
ENCFF854ZHW.bed bed (peaks); assembly: hg19 541.3 KB
ENCFF862UDL.bigBed bigBed (peaks); assembly: hg19 6.5 MB
ENCFF923QOM.bigBed bigBed (peaks); assembly: hg19 1.9 MB
ENCFF947CCD.fastq fastq (reads) 487.0 MB
ENCSR550DVK ENCSR via encode_api

eCLIP experiment on HepG2 against HNRNPC

Homo sapiens
36 data files
FileTypeSize
ENCFF006KTQ.bigBed bigBed (peaks); assembly: GRCh38 11.2 MB
ENCFF035QUK.fastq fastq (reads) 629.1 MB
ENCFF040BGS.fastq fastq (reads) 886.2 MB
ENCFF065BIC.fastq fastq (reads) 646.7 MB
ENCFF103MEF.bed bed (peaks); assembly: hg19 926.6 KB
ENCFF105AKX.bed bed (peaks); assembly: hg19 67.4 KB
ENCFF162FHQ.bam bam (alignments); assembly: GRCh38 781.2 MB
ENCFF230QOU.bed bed (peaks); assembly: GRCh38 4.9 MB
ENCFF244ESX.bed bed (peaks); assembly: hg19 1.1 MB
ENCFF260KPQ.bigBed bigBed (peaks); assembly: hg19 8.6 MB
ENCFF264TJL.bed bed (peaks); assembly: GRCh38 450.6 KB
ENCFF344JSD.bigBed bigBed (peaks); assembly: GRCh38 8.6 MB
ENCFF361VEU.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 38.9 MB
ENCFF401SPQ.bed bed (peaks); assembly: hg19 6.4 MB
ENCFF406EWT.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 54.7 MB
ENCFF440ROZ.bed bed (peaks); assembly: GRCh38 70.1 KB
ENCFF470TOW.bigBed bigBed (peaks); assembly: hg19 3.4 MB
ENCFF524SLW.bigBed bigBed (peaks); assembly: GRCh38 911.5 KB
ENCFF534YQS.bed bed (peaks); assembly: GRCh38 6.5 MB
ENCFF576LCX.bigBed bigBed (peaks); assembly: hg19 11.0 MB
ENCFF584MZO.fastq fastq (reads) 807.5 MB
ENCFF630YNF.bam bam (alignments); assembly: GRCh38 1.1 GB
ENCFF652VTM.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 54.4 MB
ENCFF674FGK.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 39.9 MB
ENCFF705SJW.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 56.0 MB
ENCFF736ZQQ.bam bam (alignments); assembly: hg19 1.0 GB
ENCFF738FJS.bed bed (peaks); assembly: hg19 4.9 MB
ENCFF774JCA.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 56.3 MB
ENCFF857KDA.bigBed bigBed (peaks); assembly: hg19 2.0 MB
ENCFF869PNM.bam bam (alignments); assembly: hg19 785.9 MB
ENCFF887LOE.bigBed bigBed (peaks); assembly: GRCh38 748.8 KB
ENCFF891BFD.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 38.7 MB
ENCFF930WRN.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 39.7 MB
ENCFF950TEB.bigBed bigBed (peaks); assembly: hg19 4.1 MB
ENCFF962BZR.bigBed bigBed (peaks); assembly: hg19 1.7 MB
ENCFF991KAG.bed bed (peaks); assembly: GRCh38 352.5 KB
ENCSR614VYQ ENCSR via encode_api

eCLIP control experiment on HepG2 against HNRNPU

Homo sapiens
8 data files
FileTypeSize
ENCFF027WDY.bam bam (alignments); assembly: GRCh38 359.0 MB
ENCFF149QMI.fastq fastq (reads) 451.8 MB
ENCFF234DPO.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 18.3 MB
ENCFF424XSW.bam bam (alignments); assembly: hg19 354.6 MB
ENCFF474XPU.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 18.2 MB
ENCFF672MVL.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 18.6 MB
ENCFF855ECL.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 17.9 MB
ENCFF962DLT.fastq fastq (reads) 472.4 MB
ENCSR871RTL ENCSR via encode_api

eCLIP control experiment on K562 against U2AF2

Homo sapiens
8 data files
FileTypeSize
ENCFF097VMD.bam bam (alignments); assembly: hg19 153.7 MB
ENCFF126CZT.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.4 MB
ENCFF227TON.bam bam (alignments); assembly: GRCh38 153.9 MB
ENCFF303MYY.fastq fastq (reads) 308.0 MB
ENCFF325JZX.fastq fastq (reads) 307.5 MB
ENCFF498CTW.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 6.9 MB
ENCFF780WFJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 9.4 MB
ENCFF945AJC.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 6.9 MB
ENCSR200SAU ENCSR via encode_api

eCLIP control experiment on K562 against DDX42

Homo sapiens
8 data files
FileTypeSize
ENCFF037AIE.fastq fastq (reads) 417.2 MB
ENCFF254IMV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 19.3 MB
ENCFF378IEN.bam bam (alignments); assembly: GRCh38 378.0 MB
ENCFF379ULH.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 20.0 MB
ENCFF409TRK.fastq fastq (reads) 435.8 MB
ENCFF581XBE.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 20.0 MB
ENCFF623MFK.bam bam (alignments); assembly: hg19 377.2 MB
ENCFF847PAT.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 19.3 MB
ENCSR214BZA ENCSR via encode_api

eCLIP experiment on HepG2 against DDX59

Homo sapiens
34 data files
FileTypeSize
ENCFF018RKD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 14.2 MB
ENCFF074EQM.bed bed (peaks); assembly: hg19 67.9 KB
ENCFF103EDF.bigBed bigBed (peaks); assembly: GRCh38 3.5 MB
ENCFF112UBR.bam bam (alignments); assembly: hg19 264.2 MB
ENCFF115ZKB.bed bed (peaks); assembly: hg19 530.2 KB
ENCFF191WAJ.fastq fastq (reads) 407.7 MB
ENCFF213PRP.bed bed (peaks); assembly: GRCh38 1.3 MB
ENCFF225KVF.bigBed bigBed (peaks); assembly: GRCh38 2.6 MB
ENCFF233GUF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.2 MB
ENCFF237BSF.bigBed bigBed (peaks); assembly: hg19 2.7 MB
ENCFF292WGO.bigBed bigBed (peaks); assembly: hg19 993.0 KB
ENCFF298QDG.fastq fastq (reads) 607.2 MB
ENCFF362KWY.bam bam (alignments); assembly: GRCh38 254.6 MB
ENCFF373XJU.bigBed bigBed (peaks); assembly: hg19 1011.5 KB
ENCFF441KPC.bed bed (peaks); assembly: hg19 1.3 MB
ENCFF447KAW.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 13.6 MB
ENCFF463LTL.bed bed (peaks); assembly: hg19 512.4 KB
ENCFF472QKI.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 20.4 MB
ENCFF480MRD.bam bam (alignments); assembly: hg19 398.8 MB
ENCFF485MSN.bed bed (peaks); assembly: hg19 1.8 MB
ENCFF489JEJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 14.7 MB
ENCFF538KWA.bam bam (alignments); assembly: GRCh38 386.1 MB
ENCFF546NOY.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 19.8 MB
ENCFF630DNS.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 14.0 MB
ENCFF656DVH.bigBed bigBed (peaks); assembly: GRCh38 437.8 KB
ENCFF703NTG.bigBed bigBed (peaks); assembly: hg19 3.6 MB
ENCFF731EXL.bigBed bigBed (peaks); assembly: GRCh38 437.6 KB
ENCFF735YZN.fastq fastq (reads) 567.4 MB
ENCFF751GMU.bed bed (peaks); assembly: GRCh38 175.4 KB
ENCFF828OKI.fastq fastq (reads) 378.9 MB
ENCFF842ALM.bed bed (peaks); assembly: GRCh38 177.7 KB
ENCFF899AWZ.bed bed (peaks); assembly: GRCh38 68.5 KB
ENCFF924DAL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 20.9 MB
ENCFF991VJI.bed bed (peaks); assembly: GRCh38 1.7 MB
ENCSR366YOG ENCSR via encode_api

eCLIP experiment on K562 against QKI

Homo sapiens
36 data files
FileTypeSize
ENCFF012WMS.bam bam (alignments) 240.1 MB
ENCFF027CBV.bed bed (peaks) 51.6 KB
ENCFF048ERC.bigBed bigBed (peaks) 1.6 MB
ENCFF120WPV.fastq fastq (reads) 1.0 GB
ENCFF162USL.bigWig bigWig (plus strand signal of unique reads) 4.7 MB
ENCFF190XSX.bed bed (peaks) 611.8 KB
ENCFF210STZ.bigBed bigBed (peaks) 806.2 KB
ENCFF216ZHP.bigBed bigBed (peaks) 678.0 KB
ENCFF303OZO.bigWig bigWig (plus strand signal of unique reads) 11.2 MB
ENCFF310GLH.bigWig bigWig (minus strand signal of unique reads) 10.8 MB
ENCFF342CVS.bed bed (peaks) 158.2 KB
ENCFF364FBK.bigBed bigBed (peaks) 1.5 MB
ENCFF372LCI.bam bam (alignments) 111.1 MB
ENCFF379OMP.bed bed (peaks) 144.8 KB
ENCFF475LRP.fastq fastq (reads) 642.2 MB
ENCFF494AKD.bam bam (alignments) 245.4 MB
ENCFF534JXG.bed bed (peaks) 622.8 KB
ENCFF640OEG.bigWig bigWig (minus strand signal of unique reads) 4.5 MB
ENCFF678IFH.bigWig bigWig (minus strand signal of unique reads) 4.4 MB
ENCFF698BKX.bam bam (alignments) 108.8 MB
ENCFF715YVP.bigWig bigWig (plus strand signal of unique reads) 11.0 MB
ENCFF735OFZ.bigWig bigWig (minus strand signal of unique reads) 10.7 MB
ENCFF765IFG.bigBed bigBed (peaks) 1.6 MB
ENCFF767WUU.bed bed (peaks) 937.3 KB
ENCFF776ISN.fastq fastq (reads) 646.0 MB
ENCFF786UOW.bed bed (peaks) 50.5 KB
ENCFF791PUD.bigBed bigBed (peaks) 337.7 KB
ENCFF815DJH.bigWig bigWig (plus strand signal of unique reads) 4.6 MB
ENCFF823SQL.fastq fastq (reads) 1.0 GB
ENCFF828YIT.bed bed (peaks) 376.4 KB
ENCFF872LOO.bigBed bigBed (peaks) 1.2 MB
ENCFF899FGS.bed bed (peaks) 370.2 KB
ENCFF938WRT.bigBed bigBed (peaks) 1.6 MB
ENCFF963AMI.bed bed (peaks) 953.7 KB
ENCFF992KRR.bigBed bigBed (peaks) 363.8 KB
ENCFF992VMD.bigBed bigBed (peaks) 1.2 MB
ENCSR388VKV ENCSR via encode_api

eCLIP control experiment on HepG2 against SMNDC1

Homo sapiens
8 data files
FileTypeSize
ENCFF040CHT.fastq fastq (reads) 507.2 MB
ENCFF232TXN.bigWig bigWig (plus strand signal of unique reads) 16.6 MB
ENCFF263MRM.bam bam (alignments) 371.2 MB
ENCFF410TUD.bam bam (alignments) 367.2 MB
ENCFF723YJC.bigWig bigWig (plus strand signal of unique reads) 16.4 MB
ENCFF740IJH.bigWig bigWig (minus strand signal of unique reads) 16.3 MB
ENCFF966FGF.bigWig bigWig (minus strand signal of unique reads) 16.1 MB
ENCFF993KFQ.fastq fastq (reads) 464.2 MB
ENCSR669DKA ENCSR via encode_api

eCLIP control experiment on K562 against HNRNPK

Homo sapiens
8 data files
FileTypeSize
ENCFF192JZL.bigWig bigWig (minus strand signal of unique reads) 10.3 MB
ENCFF214MOY.bigWig bigWig (plus strand signal of unique reads) 10.6 MB
ENCFF223QBU.fastq fastq (reads) 251.2 MB
ENCFF280QZL.fastq fastq (reads) 261.3 MB
ENCFF399CEH.bam bam (alignments) 213.1 MB
ENCFF567GNU.bigWig bigWig (minus strand signal of unique reads) 10.2 MB
ENCFF742LSN.bam bam (alignments) 212.0 MB
ENCFF801TXF.bigWig bigWig (plus strand signal of unique reads) 10.6 MB
ENCSR722LZB ENCSR via encode_api

eCLIP control experiment on K562 against CSTF2T

Homo sapiens
8 data files
FileTypeSize
ENCFF048AYC.bigWig bigWig (plus strand signal of unique reads) 22.4 MB
ENCFF161QNF.bigWig bigWig (plus strand signal of unique reads) 22.2 MB
ENCFF234QSA.bam bam (alignments) 439.4 MB
ENCFF271URZ.fastq fastq (reads) 552.6 MB
ENCFF469KLO.bigWig bigWig (minus strand signal of unique reads) 21.4 MB
ENCFF599GSZ.fastq fastq (reads) 532.6 MB
ENCFF729BOP.bam bam (alignments) 437.2 MB
ENCFF999RGE.bigWig bigWig (minus strand signal of unique reads) 21.7 MB
ENCSR435EVK ENCSR via encode_api

eCLIP control experiment on K562 against SND1

Homo sapiens
8 data files
FileTypeSize
ENCFF056XTI.fastq fastq (reads) 561.9 MB
ENCFF127WBJ.bigWig bigWig (plus strand signal of unique reads) 27.6 MB
ENCFF153XAY.bigWig bigWig (minus strand signal of unique reads) 26.8 MB
ENCFF438IIB.bam bam (alignments) 596.1 MB
ENCFF501RLP.bigWig bigWig (plus strand signal of unique reads) 27.7 MB
ENCFF502YXG.bam bam (alignments) 594.7 MB
ENCFF711IGJ.fastq fastq (reads) 542.6 MB
ENCFF914JXE.bigWig bigWig (minus strand signal of unique reads) 26.7 MB
ENCSR619LRH ENCSR via encode_api

eCLIP control experiment on HepG2 against TROVE2

Homo sapiens
8 data files
FileTypeSize
ENCFF035KPX.bigWig bigWig (minus strand signal of unique reads) 37.5 MB
ENCFF194SFB.bam bam (alignments) 751.6 MB
ENCFF238PHM.bigWig bigWig (minus strand signal of unique reads) 36.2 MB
ENCFF456RUG.fastq fastq (reads) 750.8 MB
ENCFF465JRJ.fastq fastq (reads) 673.1 MB
ENCFF777TUS.bigWig bigWig (plus strand signal of unique reads) 37.5 MB
ENCFF835FXZ.bigWig bigWig (plus strand signal of unique reads) 36.8 MB
ENCFF894PGH.bam bam (alignments) 766.9 MB
ENCSR387RGT ENCSR via encode_api

eCLIP control experiment on K562 against IGF2BP2

Homo sapiens
8 data files
FileTypeSize
ENCFF011HZT.bam bam (alignments) 169.9 MB
ENCFF426FUU.bigWig bigWig (plus strand signal of unique reads) 10.9 MB
ENCFF491AKD.bigWig bigWig (minus strand signal of unique reads) 10.4 MB
ENCFF610LIH.fastq fastq (reads) 261.8 MB
ENCFF647SFR.bigWig bigWig (plus strand signal of unique reads) 10.9 MB
ENCFF810PVM.bigWig bigWig (minus strand signal of unique reads) 10.5 MB
ENCFF819GBX.bam bam (alignments) 170.8 MB
ENCFF939IUP.fastq fastq (reads) 272.1 MB
ENCSR799EKA ENCSR via encode_api

eCLIP control experiment on HepG2 against RBFOX2

Homo sapiens
8 data files
FileTypeSize
ENCFF139QQP.bigWig bigWig (plus strand signal of unique reads) 16.5 MB
ENCFF264UQQ.fastq fastq (reads) 488.2 MB
ENCFF515BTB.bam bam (alignments) 353.9 MB
ENCFF582MIQ.bigWig bigWig (minus strand signal of unique reads) 16.0 MB
ENCFF590UCY.bam bam (alignments) 349.6 MB
ENCFF592MRJ.bigWig bigWig (minus strand signal of unique reads) 15.8 MB
ENCFF648TWD.fastq fastq (reads) 469.4 MB
ENCFF655YBJ.bigWig bigWig (plus strand signal of unique reads) 16.2 MB
ENCSR709ABG ENCSR via encode_api

eCLIP control experiment on HepG2 against NOL12

Homo sapiens
8 data files
FileTypeSize
ENCFF026OKT.bam bam (alignments) 444.3 MB
ENCFF218DLM.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCFF464UMY.bigWig bigWig (plus strand signal of unique reads) 19.6 MB
ENCFF579SPM.bigWig bigWig (minus strand signal of unique reads) 19.2 MB
ENCFF635VEP.fastq fastq (reads) 588.0 MB
ENCFF818JLM.bam bam (alignments) 435.5 MB
ENCFF847HXV.fastq fastq (reads) 618.6 MB
ENCFF853LVO.bigWig bigWig (plus strand signal of unique reads) 20.0 MB
ENCSR305KNE ENCSR via encode_api

eCLIP control experiment on K562 against SF3B4

Homo sapiens
8 data files
FileTypeSize
ENCFF002UEA.bigWig bigWig (plus strand signal of unique reads) 24.3 MB
ENCFF492WZW.fastq fastq (reads) 807.4 MB
ENCFF503WPM.bam bam (alignments) 514.1 MB
ENCFF586CAN.bigWig bigWig (minus strand signal of unique reads) 22.9 MB
ENCFF627KBO.bigWig bigWig (plus strand signal of unique reads) 23.7 MB
ENCFF735PKL.bam bam (alignments) 524.9 MB
ENCFF763PEV.bigWig bigWig (minus strand signal of unique reads) 23.5 MB
ENCFF802HAI.fastq fastq (reads) 769.3 MB
ENCSR009CIV ENCSR via encode_api

eCLIP control experiment on K562 against NOLC1

Homo sapiens
8 data files
FileTypeSize
ENCFF011IBT.bigWig bigWig (minus strand signal of unique reads) 13.8 MB
ENCFF032GIW.bam bam (alignments) 280.1 MB
ENCFF105DRR.bigWig bigWig (minus strand signal of unique reads) 13.7 MB
ENCFF415WMT.bam bam (alignments) 278.6 MB
ENCFF418BBL.bigWig bigWig (plus strand signal of unique reads) 14.4 MB
ENCFF648BBJ.bigWig bigWig (plus strand signal of unique reads) 14.5 MB
ENCFF813QRH.fastq fastq (reads) 550.3 MB
ENCFF900HNJ.fastq fastq (reads) 541.6 MB
ENCSR412NOW ENCSR via encode_api

eCLIP experiment on K562 against HNRNPM

Homo sapiens
36 data files
FileTypeSize
ENCFF005PKK.bed bed (peaks) 1.5 MB
ENCFF016LSY.bed bed (peaks) 1.5 MB
ENCFF024KBB.fastq fastq (reads) 246.9 MB
ENCFF050PTL.bam bam (alignments) 230.3 MB
ENCFF058WYR.bed bed (peaks) 699.9 KB
ENCFF100CFV.bigBed bigBed (peaks) 2.9 MB
ENCFF100HQU.bigWig bigWig (minus strand signal of unique reads) 14.2 MB
ENCFF123ODC.bigBed bigBed (peaks) 708.0 KB
ENCFF168OOY.bigWig bigWig (minus strand signal of unique reads) 13.8 MB
ENCFF169FPF.fastq fastq (reads) 236.5 MB
ENCFF243GOY.bigWig bigWig (plus strand signal of unique reads) 14.7 MB
ENCFF251TWP.bigWig bigWig (plus strand signal of unique reads) 15.2 MB
ENCFF259AUE.bam bam (alignments) 230.4 MB
ENCFF295POA.bigBed bigBed (peaks) 2.9 MB
ENCFF307KHE.bigBed bigBed (peaks) 1.5 MB
ENCFF315KYY.fastq fastq (reads) 223.5 MB
ENCFF327FBF.bed bed (peaks) 1.5 MB
ENCFF329VCJ.bigWig bigWig (minus strand signal of unique reads) 14.3 MB
ENCFF342PGS.bed bed (peaks) 134.0 KB
ENCFF379LZD.bam bam (alignments) 228.5 MB
ENCFF389NRU.fastq fastq (reads) 214.3 MB
ENCFF426AJD.bigWig bigWig (plus strand signal of unique reads) 14.9 MB
ENCFF445ENC.bed bed (peaks) 134.3 KB
ENCFF462KTW.bed bed (peaks) 1.5 MB
ENCFF571NRK.bed bed (peaks) 272.1 KB
ENCFF630VFK.bigBed bigBed (peaks) 588.5 KB
ENCFF675ZIU.bed bed (peaks) 260.4 KB
ENCFF706HGN.bigBed bigBed (peaks) 2.9 MB
ENCFF810CZY.bigBed bigBed (peaks) 1.5 MB
ENCFF848MRK.bigBed bigBed (peaks) 2.4 MB
ENCFF854ARI.bigBed bigBed (peaks) 2.8 MB
ENCFF854QQW.bam bam (alignments) 232.9 MB
ENCFF868FLU.bigWig bigWig (minus strand signal of unique reads) 13.6 MB
ENCFF892XDU.bigBed bigBed (peaks) 2.9 MB
ENCFF895QHH.bigWig bigWig (plus strand signal of unique reads) 15.1 MB
ENCFF979QTN.bed bed (peaks) 663.2 KB
ENCSR080OLK ENCSR via encode_api

eCLIP control experiment on HepG2 against ILF3

Homo sapiens
8 data files
FileTypeSize
ENCFF107PWV.bigWig bigWig (plus strand signal of unique reads) 14.8 MB
ENCFF160LFR.bam bam (alignments) 260.8 MB
ENCFF442SJM.bigWig bigWig (plus strand signal of unique reads) 15.2 MB
ENCFF489GBW.fastq fastq (reads) 371.2 MB
ENCFF500NQE.fastq fastq (reads) 324.5 MB
ENCFF641BAD.bigWig bigWig (minus strand signal of unique reads) 14.4 MB
ENCFF950TBS.bam bam (alignments) 253.5 MB
ENCFF982BUX.bigWig bigWig (minus strand signal of unique reads) 14.8 MB
ENCSR811FFO ENCSR via encode_api

eCLIP control experiment on K562 against FAM120A

Homo sapiens
8 data files
FileTypeSize
ENCFF020ZSX.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 21.3 MB
ENCFF133OWC.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 21.4 MB
ENCFF135HYO.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 20.5 MB
ENCFF160DFZ.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 20.6 MB
ENCFF161YHF.fastq fastq (reads) 549.9 MB
ENCFF847OPT.bam bam (alignments); assembly: hg19 413.3 MB
ENCFF897LLL.fastq fastq (reads) 531.2 MB
ENCFF948CVQ.bam bam (alignments); assembly: GRCh38 414.9 MB
ENCSR309GHK ENCSR via encode_api

eCLIP control experiment on HepG2 against CSTF2

Homo sapiens
8 data files
FileTypeSize
ENCFF091VTP.bam bam (alignments) 239.0 MB
ENCFF129RTI.bigWig bigWig (plus strand signal of unique reads) 13.5 MB
ENCFF413QVJ.fastq fastq (reads) 275.9 MB
ENCFF539ISA.bigWig bigWig (minus strand signal of unique reads) 13.1 MB
ENCFF583PLK.bigWig bigWig (plus strand signal of unique reads) 13.7 MB
ENCFF815MIN.bigWig bigWig (minus strand signal of unique reads) 13.3 MB
ENCFF836AYV.bam bam (alignments) 235.6 MB
ENCFF900NQN.fastq fastq (reads) 243.4 MB
ENCSR704LTK ENCSR via encode_api

eCLIP control experiment on HepG2 against FKBP4

Homo sapiens
8 data files
FileTypeSize
ENCFF143QIL.fastq fastq (reads) 306.6 MB
ENCFF151HZU.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 17.2 MB
ENCFF194AMH.bam bam (alignments); assembly: hg19 328.7 MB
ENCFF233ONK.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 17.6 MB
ENCFF648UKF.fastq fastq (reads) 313.5 MB
ENCFF677BNB.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 17.1 MB
ENCFF903KIZ.bam bam (alignments); assembly: GRCh38 330.8 MB
ENCFF904BPY.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 17.5 MB
ENCSR619RLC ENCSR via encode_api

eCLIP control experiment on K562 against TRA2A

Homo sapiens
8 data files
FileTypeSize
ENCFF057LEI.fastq fastq (reads) 380.0 MB
ENCFF068LVA.bam bam (alignments) 157.0 MB
ENCFF169EQC.fastq fastq (reads) 367.9 MB
ENCFF175TON.bam bam (alignments) 156.9 MB
ENCFF373CDK.bigWig bigWig (plus strand signal of unique reads) 9.6 MB
ENCFF489NNT.bigWig bigWig (plus strand signal of unique reads) 9.6 MB
ENCFF665TWY.bigWig bigWig (minus strand signal of unique reads) 9.1 MB
ENCFF673NIM.bigWig bigWig (minus strand signal of unique reads) 9.1 MB
ENCSR735MBZ ENCSR via encode_api

eCLIP control experiment on K562 against FMR1

Homo sapiens
8 data files
FileTypeSize
ENCFF140QVQ.bam bam (alignments); assembly: GRCh38 180.0 MB
ENCFF227RQD.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 10.3 MB
ENCFF233FKH.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 10.4 MB
ENCFF328KAL.bam bam (alignments); assembly: hg19 178.8 MB
ENCFF456EHJ.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 10.9 MB
ENCFF495FSA.fastq fastq (reads) 301.8 MB
ENCFF524AJF.fastq fastq (reads) 284.0 MB
ENCFF813XOE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 11.0 MB
ENCSR459ONR ENCSR via encode_api

eCLIP control experiment on HepG2 against HNRNPM

Homo sapiens
8 data files
FileTypeSize
ENCFF021ZKT.bigWig bigWig (plus strand signal of unique reads) 18.4 MB
ENCFF072DMY.bigWig bigWig (plus strand signal of unique reads) 18.3 MB
ENCFF302HGT.fastq fastq (reads) 333.5 MB
ENCFF355NYZ.bam bam (alignments) 357.7 MB
ENCFF374BGY.fastq fastq (reads) 349.3 MB
ENCFF381PFB.bam bam (alignments) 355.7 MB
ENCFF572VPO.bigWig bigWig (minus strand signal of unique reads) 17.8 MB
ENCFF934TYZ.bigWig bigWig (minus strand signal of unique reads) 18.1 MB
ENCSR060VZF ENCSR via encode_api

eCLIP control experiment on HepG2 against SRSF9

Homo sapiens
8 data files
FileTypeSize
ENCFF060BMG.bam bam (alignments) 186.9 MB
ENCFF078ESP.bigWig bigWig (minus strand signal of unique reads) 9.0 MB
ENCFF361CSS.fastq fastq (reads) 379.2 MB
ENCFF442LIA.bigWig bigWig (plus strand signal of unique reads) 9.2 MB
ENCFF463PBP.fastq fastq (reads) 370.8 MB
ENCFF487XVX.bigWig bigWig (minus strand signal of unique reads) 9.1 MB
ENCFF554CGX.bigWig bigWig (plus strand signal of unique reads) 9.3 MB
ENCFF849LMJ.bam bam (alignments) 185.1 MB
ENCSR205ZCE ENCSR via encode_api

eCLIP control experiment on HepG2 against IGF2BP1

Homo sapiens
8 data files
FileTypeSize
ENCFF032OPL.bam bam (alignments); assembly: GRCh38 231.3 MB
ENCFF162ZOL.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 9.3 MB
ENCFF207TDD.fastq fastq (reads) 419.1 MB
ENCFF389YBN.fastq fastq (reads) 405.0 MB
ENCFF444KWD.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 9.5 MB
ENCFF546UAX.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 9.3 MB
ENCFF699NWF.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 9.1 MB
ENCFF772RXA.bam bam (alignments); assembly: hg19 227.6 MB
ENCSR170XQH ENCSR via encode_api

eCLIP control experiment on K562 against XRN2

Homo sapiens
8 data files
FileTypeSize
ENCFF210MRS.bigWig bigWig (plus strand signal of unique reads) 16.1 MB
ENCFF449OPY.fastq fastq (reads) 365.1 MB
ENCFF624VHF.fastq fastq (reads) 381.9 MB
ENCFF651CUS.bam bam (alignments) 297.7 MB
ENCFF668YFI.bigWig bigWig (minus strand signal of unique reads) 15.5 MB
ENCFF768FYM.bam bam (alignments) 298.2 MB
ENCFF883VSG.bigWig bigWig (plus strand signal of unique reads) 16.1 MB
ENCFF888NSV.bigWig bigWig (minus strand signal of unique reads) 15.5 MB
ENCSR249WNK ENCSR via encode_api

eCLIP control experiment on K562 against CPSF6

Homo sapiens
8 data files
FileTypeSize
ENCFF523STK.fastq fastq (reads) 368.2 MB
ENCFF727WOV.bigWig bigWig (minus strand signal of unique reads); assembly: GRCh38 12.7 MB
ENCFF747XJC.bam bam (alignments); assembly: hg19 230.5 MB
ENCFF751WNT.bigWig bigWig (plus strand signal of unique reads); assembly: hg19 13.1 MB
ENCFF753TBE.bigWig bigWig (plus strand signal of unique reads); assembly: GRCh38 13.2 MB
ENCFF842FFD.bam bam (alignments); assembly: GRCh38 231.2 MB
ENCFF887HZS.fastq fastq (reads) 379.5 MB
ENCFF969QLN.bigWig bigWig (minus strand signal of unique reads); assembly: hg19 12.6 MB
ENCSR018ZUE ENCSR via encode_api

eCLIP experiment on HepG2 against FKBP4

Homo sapiens
36 data files
FileTypeSize
ENCFF006UHG.bigBed bigBed (peaks) 1.4 MB
ENCFF017NNY.bigBed bigBed (peaks) 334.6 KB
ENCFF035UHD.bam bam (alignments) 113.1 MB
ENCFF048HXO.bigWig bigWig (minus strand signal of unique reads) 10.3 MB
ENCFF068KHY.bed bed (peaks) 117.1 KB
ENCFF073OON.bigBed bigBed (peaks) 1.4 MB
ENCFF096DJH.bigBed bigBed (peaks) 952.6 KB
ENCFF134QII.bed bed (peaks) 345.6 KB
ENCFF141QHH.bam bam (alignments) 166.6 MB
ENCFF214SWU.fastq fastq (reads) 222.6 MB
ENCFF249FBZ.bam bam (alignments) 168.4 MB
ENCFF331RXS.bigBed bigBed (peaks) 530.2 KB
ENCFF374GKD.bed bed (peaks) 28.7 KB
ENCFF401RMG.bigWig bigWig (minus strand signal of unique reads) 5.9 MB
ENCFF415AKY.bed bed (peaks) 225.5 KB
ENCFF437VVV.fastq fastq (reads) 233.7 MB
ENCFF447CKJ.bigWig bigWig (plus strand signal of unique reads) 6.2 MB
ENCFF458VOM.bigBed bigBed (peaks) 721.7 KB
ENCFF487PAA.fastq fastq (reads) 221.7 MB
ENCFF493KJV.bigWig bigWig (plus strand signal of unique reads) 10.7 MB
ENCFF518MXG.bigBed bigBed (peaks) 1.3 MB
ENCFF521RNZ.bigBed bigBed (peaks) 984.8 KB
ENCFF546BPY.bigWig bigWig (minus strand signal of unique reads) 10.2 MB
ENCFF585PKG.bed bed (peaks) 847.8 KB
ENCFF704SMP.bigWig bigWig (minus strand signal of unique reads) 5.9 MB
ENCFF768JXM.bigWig bigWig (plus strand signal of unique reads) 6.1 MB
ENCFF802VWZ.bam bam (alignments) 111.7 MB
ENCFF808SPL.bigBed bigBed (peaks) 229.7 KB
ENCFF814MSM.bed bed (peaks) 521.1 KB
ENCFF821LAJ.bigWig bigWig (plus strand signal of unique reads) 10.8 MB
ENCFF841KIH.bed bed (peaks) 81.3 KB
ENCFF949BFD.bed bed (peaks) 845.1 KB
ENCFF957AOZ.bed bed (peaks) 28.7 KB
ENCFF975CKG.fastq fastq (reads) 209.7 MB
ENCFF977KIJ.bigBed bigBed (peaks) 955.7 KB
ENCFF993XGD.bed bed (peaks) 523.1 KB
ENCSR661ICQ ENCSR via encode_api

eCLIP experiment on K562 against PUM2

Homo sapiens
36 data files
FileTypeSize
ENCFF041KJT.fastq fastq (reads) 454.9 MB
ENCFF079UZP.bigWig bigWig (minus strand signal of unique reads) 13.4 MB
ENCFF091HXE.bed bed (peaks) 942.4 KB
ENCFF133DNM.fastq fastq (reads) 421.6 MB
ENCFF133NMP.bigWig bigWig (plus strand signal of unique reads) 13.7 MB
ENCFF141SVY.bed bed (peaks) 1.2 MB
ENCFF177VQI.bam bam (alignments) 113.4 MB
ENCFF223ACT.bigBed bigBed (peaks) 2.4 MB
ENCFF231WHF.bam bam (alignments) 108.1 MB
ENCFF262JRE.bed bed (peaks) 1.2 MB
ENCFF280ONP.bam bam (alignments) 218.7 MB
ENCFF284AUN.bigBed bigBed (peaks) 670.1 KB
ENCFF285IAZ.bigBed bigBed (peaks) 2.5 MB
ENCFF345UFC.bigBed bigBed (peaks) 1.4 MB
ENCFF372VPV.bed bed (peaks) 918.7 KB
ENCFF406SXD.bigWig bigWig (plus strand signal of unique reads) 5.9 MB
ENCFF440FWO.bed bed (peaks) 305.6 KB
ENCFF446GYQ.bed bed (peaks) 273.2 KB
ENCFF452BKL.bigWig bigWig (minus strand signal of unique reads) 5.5 MB
ENCFF462SCV.fastq fastq (reads) 451.3 MB
ENCFF657MOM.bigWig bigWig (minus strand signal of unique reads) 13.2 MB
ENCFF662CVN.bigBed bigBed (peaks) 1.6 MB
ENCFF673PJB.bigBed bigBed (peaks) 1.6 MB
ENCFF730GJX.bed bed (peaks) 650.7 KB
ENCFF730KQX.bigWig bigWig (plus strand signal of unique reads) 13.9 MB
ENCFF732EQX.bam bam (alignments) 212.5 MB
ENCFF767LWE.bed bed (peaks) 133.7 KB
ENCFF769SCB.bigWig bigWig (plus strand signal of unique reads) 5.7 MB
ENCFF862WPA.bigBed bigBed (peaks) 2.0 MB
ENCFF870FHW.bigBed bigBed (peaks) 2.2 MB
ENCFF880MWQ.bed bed (peaks) 127.5 KB
ENCFF891PQB.bed bed (peaks) 632.2 KB
ENCFF902VHV.bigWig bigWig (minus strand signal of unique reads) 5.6 MB
ENCFF952WJW.bigBed bigBed (peaks) 1.2 MB
ENCFF956TOZ.fastq fastq (reads) 422.3 MB
ENCFF980IAB.bigBed bigBed (peaks) 688.9 KB
ENCSR828ZID ENCSR via encode_api

eCLIP experiment on HepG2 against HNRNPK

Homo sapiens
36 data files
FileTypeSize
ENCFF016HQT.fastq fastq (reads) 211.8 MB
ENCFF025QVR.bed bed (peaks) 572.5 KB
ENCFF052YOQ.bigBed bigBed (peaks) 3.1 MB
ENCFF073VAO.bigWig bigWig (minus strand signal of unique reads) 16.2 MB
ENCFF078NBU.bigWig bigWig (plus strand signal of unique reads) 16.9 MB
ENCFF118YMC.fastq fastq (reads) 212.0 MB
ENCFF120AAW.fastq fastq (reads) 208.3 MB
ENCFF147EIS.bigWig bigWig (plus strand signal of unique reads) 16.9 MB
ENCFF159LAW.bigBed bigBed (peaks) 3.0 MB
ENCFF184UOA.bed bed (peaks) 705.9 KB
ENCFF198ISB.bam bam (alignments) 311.0 MB
ENCFF234AEU.bigWig bigWig (minus strand signal of unique reads) 18.1 MB
ENCFF271ASO.bed bed (peaks) 287.1 KB
ENCFF288MWL.bed bed (peaks) 1.5 MB
ENCFF303CFU.bigBed bigBed (peaks) 2.2 MB
ENCFF329QRR.bam bam (alignments) 290.7 MB
ENCFF391DOL.bigBed bigBed (peaks) 1.1 MB
ENCFF404YRY.bigWig bigWig (plus strand signal of unique reads) 18.9 MB
ENCFF424UDJ.bigBed bigBed (peaks) 660.9 KB
ENCFF457EXY.bam bam (alignments) 310.2 MB
ENCFF457MFA.bigBed bigBed (peaks) 531.3 KB
ENCFF494CVZ.bigWig bigWig (minus strand signal of unique reads) 16.2 MB
ENCFF553XCL.bam bam (alignments) 289.5 MB
ENCFF556EBT.bed bed (peaks) 1.5 MB
ENCFF578NZU.bigBed bigBed (peaks) 2.8 MB
ENCFF608OWA.bigWig bigWig (minus strand signal of unique reads) 18.0 MB
ENCFF649FBV.bigBed bigBed (peaks) 1.3 MB
ENCFF689WRD.bigWig bigWig (plus strand signal of unique reads) 18.8 MB
ENCFF754XAQ.bed bed (peaks) 1.7 MB
ENCFF855CPQ.bed bed (peaks) 120.4 KB
ENCFF861DAK.bigBed bigBed (peaks) 3.5 MB
ENCFF877KBJ.bed bed (peaks) 1.7 MB
ENCFF887CFI.bigBed bigBed (peaks) 3.5 MB
ENCFF924WZQ.fastq fastq (reads) 212.3 MB
ENCFF993NVI.bed bed (peaks) 121.4 KB
ENCFF994SDB.bed bed (peaks) 220.7 KB
ENCSR268ETU ENCSR via encode_api

eCLIP experiment on K562 against HNRNPK

Homo sapiens
36 data files
FileTypeSize
ENCFF049KXT.bam bam (alignments) 262.8 MB
ENCFF071EBB.bigWig bigWig (plus strand signal of unique reads) 8.4 MB
ENCFF079MYZ.bed bed (peaks) 794.9 KB
ENCFF087BUT.bed bed (peaks) 411.4 KB
ENCFF088TEB.bigBed bigBed (peaks) 1.8 MB
ENCFF095TLF.bigBed bigBed (peaks) 853.9 KB
ENCFF131UIL.bigWig bigWig (minus strand signal of unique reads) 8.0 MB
ENCFF156HRW.bigWig bigWig (plus strand signal of unique reads) 14.5 MB
ENCFF169OLG.fastq fastq (reads) 249.5 MB
ENCFF228HUK.fastq fastq (reads) 206.2 MB
ENCFF241AOZ.bed bed (peaks) 800.3 KB
ENCFF302VJK.bigBed bigBed (peaks) 452.3 KB
ENCFF335HRO.fastq fastq (reads) 154.7 MB
ENCFF353ZBK.bigWig bigWig (plus strand signal of unique reads) 8.4 MB
ENCFF378VYJ.bigWig bigWig (plus strand signal of unique reads) 14.5 MB
ENCFF405ESF.bam bam (alignments) 263.2 MB
ENCFF448SCQ.bed bed (peaks) 62.9 KB
ENCFF449ANI.bigBed bigBed (peaks) 1.8 MB
ENCFF508MTN.bigBed bigBed (peaks) 1.7 MB
ENCFF525XIM.bam bam (alignments) 179.1 MB
ENCFF562ZXX.bigWig bigWig (minus strand signal of unique reads) 13.8 MB
ENCFF592UVI.bigBed bigBed (peaks) 1.4 MB
ENCFF636QVD.bigBed bigBed (peaks) 1.4 MB
ENCFF655RBH.bed bed (peaks) 161.3 KB
ENCFF737WBM.bigBed bigBed (peaks) 934.6 KB
ENCFF769QNG.bed bed (peaks) 1.0 MB
ENCFF818LIK.bigBed bigBed (peaks) 1.8 MB
ENCFF824IDO.bed bed (peaks) 1.1 MB
ENCFF825KDQ.bigBed bigBed (peaks) 352.5 KB
ENCFF887DHR.bed bed (peaks) 475.6 KB
ENCFF890SLG.bigWig bigWig (minus strand signal of unique reads) 8.0 MB
ENCFF894NKS.bam bam (alignments) 178.5 MB
ENCFF900FEK.fastq fastq (reads) 177.8 MB
ENCFF918XJQ.bed bed (peaks) 62.3 KB
ENCFF926VXD.bigWig bigWig (minus strand signal of unique reads) 13.7 MB
ENCFF951RJR.bed bed (peaks) 181.1 KB
ENCSR028CRL ENCSR via encode_api

eCLIP control experiment on K562 against DDX3X

Homo sapiens
8 data files
FileTypeSize
ENCFF006DQH.fastq fastq (reads) 569.2 MB
ENCFF051BYG.bigWig bigWig (minus strand signal of unique reads) 20.4 MB
ENCFF057VZS.bam bam (alignments) 449.3 MB
ENCFF098VCG.bigWig bigWig (plus strand signal of unique reads) 21.3 MB
ENCFF106OWX.bigWig bigWig (plus strand signal of unique reads) 21.1 MB
ENCFF697EJY.bam bam (alignments) 444.6 MB
ENCFF724CMM.bigWig bigWig (minus strand signal of unique reads) 20.7 MB
ENCFF768GAB.fastq fastq (reads) 514.7 MB
ENCSR977GTT ENCSR via encode_api

eCLIP control experiment on K562 against GNL3

Homo sapiens
8 data files
FileTypeSize
ENCFF419JON.bam bam (alignments) 513.3 MB
ENCFF449DRT.bigWig bigWig (plus strand signal of unique reads) 25.6 MB
ENCFF651VHA.bam bam (alignments) 513.5 MB
ENCFF667ZVM.bigWig bigWig (plus strand signal of unique reads) 25.6 MB
ENCFF720COV.fastq fastq (reads) 807.9 MB
ENCFF832LGA.bigWig bigWig (minus strand signal of unique reads) 24.7 MB
ENCFF892UQR.fastq fastq (reads) 705.5 MB
ENCFF997HAK.bigWig bigWig (minus strand signal of unique reads) 24.7 MB
ENCSR989SMC ENCSR via encode_api

eCLIP experiment on K562 against FTO

Homo sapiens
34 data files
FileTypeSize
ENCFF016FLK.bigWig bigWig (minus strand signal of unique reads) 13.5 MB
ENCFF018SYJ.bed bed (peaks) 1.2 MB
ENCFF022CWN.bigBed bigBed (peaks) 2.0 MB
ENCFF157EDZ.bigBed bigBed (peaks) 998.3 KB
ENCFF176CHW.bigWig bigWig (plus strand signal of unique reads) 14.0 MB
ENCFF185EIE.fastq fastq (reads) 444.4 MB
ENCFF220KGX.bigWig bigWig (plus strand signal of unique reads) 12.3 MB
ENCFF344ATE.bigWig bigWig (minus strand signal of unique reads) 11.8 MB
ENCFF356RFY.bigBed bigBed (peaks) 2.3 MB
ENCFF374PSI.fastq fastq (reads) 552.0 MB
ENCFF387LVD.bigBed bigBed (peaks) 408.0 KB
ENCFF397ROZ.bigBed bigBed (peaks) 456.0 KB
ENCFF441YAZ.bed bed (peaks) 18.5 KB
ENCFF462TDG.bam bam (alignments) 245.0 MB
ENCFF465VTS.bed bed (peaks) 1.4 MB
ENCFF472SQF.bed bed (peaks) 446.2 KB
ENCFF485IYX.bed bed (peaks) 1.2 MB
ENCFF503NFZ.bigWig bigWig (minus strand signal of unique reads) 13.6 MB
ENCFF507ZJR.bed bed (peaks) 1.4 MB
ENCFF527LQR.bigWig bigWig (plus strand signal of unique reads) 12.1 MB
ENCFF538JIE.bigBed bigBed (peaks) 2.3 MB
ENCFF552FOU.bam bam (alignments) 212.7 MB
ENCFF589ZWA.bam bam (alignments) 250.4 MB
ENCFF618MGU.bigWig bigWig (plus strand signal of unique reads) 14.2 MB
ENCFF624VSA.bed bed (peaks) 157.4 KB
ENCFF636JOT.bigWig bigWig (minus strand signal of unique reads) 11.6 MB
ENCFF642JKU.bigBed bigBed (peaks) 2.0 MB
ENCFF666GWV.bam bam (alignments) 207.4 MB
ENCFF733GGA.bigBed bigBed (peaks) 889.3 KB
ENCFF782STX.bed bed (peaks) 188.8 KB
ENCFF836JKJ.fastq fastq (reads) 469.4 MB
ENCFF877URW.fastq fastq (reads) 521.8 MB
ENCFF907KMM.bed bed (peaks) 523.2 KB
ENCFF924OVC.bed bed (peaks) 18.2 KB
ENCSR775UPS ENCSR via encode_api

eCLIP control experiment on HepG2 against RBM22

Homo sapiens
8 data files
FileTypeSize
ENCFF091VIF.bam bam (alignments) 658.2 MB
ENCFF124SOF.bigWig bigWig (minus strand signal of unique reads) 30.0 MB
ENCFF273WXJ.fastq fastq (reads) 981.2 MB
ENCFF380JVP.bigWig bigWig (minus strand signal of unique reads) 29.2 MB
ENCFF615UKX.bam bam (alignments) 677.1 MB
ENCFF783CZE.bigWig bigWig (plus strand signal of unique reads) 30.0 MB
ENCFF792JLI.bigWig bigWig (plus strand signal of unique reads) 30.8 MB
ENCFF936IFL.fastq fastq (reads) 904.3 MB
ENCSR595PFU ENCSR via encode_api

eCLIP control experiment on K562 against NSUN2

Homo sapiens
8 data files
FileTypeSize
ENCFF112GWP.bam bam (alignments) 448.0 MB
ENCFF244XCT.bigWig bigWig (plus strand signal of unique reads) 21.3 MB
ENCFF450ZCN.bigWig bigWig (minus strand signal of unique reads) 21.1 MB
ENCFF489IRY.fastq fastq (reads) 658.6 MB
ENCFF568SAI.bam bam (alignments) 459.0 MB
ENCFF596OTS.bigWig bigWig (plus strand signal of unique reads) 21.8 MB
ENCFF645ZNG.fastq fastq (reads) 570.4 MB
ENCFF840IMU.bigWig bigWig (minus strand signal of unique reads) 20.6 MB
ENCSR461LGW ENCSR via encode_api

eCLIP control experiment on K562 against UPF1

Homo sapiens
8 data files
FileTypeSize
ENCFF135FSK.bigWig bigWig (plus strand signal of unique reads) 23.7 MB
ENCFF210JCS.fastq fastq (reads) 472.9 MB
ENCFF429YHX.bam bam (alignments) 488.2 MB
ENCFF519MAY.fastq fastq (reads) 409.3 MB
ENCFF612OKV.bigWig bigWig (minus strand signal of unique reads) 22.5 MB
ENCFF735CEZ.bigWig bigWig (plus strand signal of unique reads) 23.3 MB
ENCFF761QQO.bigWig bigWig (minus strand signal of unique reads) 23.0 MB
ENCFF806EIK.bam bam (alignments) 478.4 MB
ENCSR746ZSV ENCSR via encode_api

eCLIP control experiment on HepG2 against LIN28B

Homo sapiens
8 data files
FileTypeSize
ENCFF244QMW.bam bam (alignments) 204.1 MB
ENCFF255JRN.bigWig bigWig (plus strand signal of unique reads) 10.4 MB
ENCFF314BSZ.bigWig bigWig (plus strand signal of unique reads) 7.7 MB
ENCFF362UUB.bam bam (alignments) 200.5 MB
ENCFF436NGE.fastq fastq (reads) 321.0 MB
ENCFF439RMU.fastq fastq (reads) 353.5 MB
ENCFF708NYA.bigWig bigWig (minus strand signal of unique reads) 10.2 MB
ENCFF782EGF.bigWig bigWig (minus strand signal of unique reads) 10.0 MB
ENCSR529FKI ENCSR via encode_api

eCLIP experiment on K562 against CSDA

Homo sapiens
36 data files
FileTypeSize
ENCFF007ERP.bigBed bigBed (peaks) 7.6 MB
ENCFF036YTF.bed bed (peaks) 2.5 MB
ENCFF047HLT.fastq fastq (reads) 670.7 MB
ENCFF047ZXN.bigWig bigWig (minus strand signal of unique reads) 22.3 MB
ENCFF048UHG.bigWig bigWig (plus strand signal of unique reads) 23.1 MB
ENCFF048XVA.bigBed bigBed (peaks) 7.8 MB
ENCFF087QMG.bigWig bigWig (plus strand signal of unique reads) 24.1 MB
ENCFF163JFW.bigBed bigBed (peaks) 2.3 MB
ENCFF176ZDX.bam bam (alignments) 707.7 MB
ENCFF184OIG.bam bam (alignments) 660.6 MB
ENCFF210TQC.bed bed (peaks) 2.7 MB
ENCFF231IID.bed bed (peaks) 2.7 MB
ENCFF279AVU.bam bam (alignments) 664.2 MB
ENCFF375SSS.bigBed bigBed (peaks) 6.0 MB
ENCFF398VQU.bed bed (peaks) 1.0 MB
ENCFF472NTC.bigBed bigBed (peaks) 5.3 MB
ENCFF526YVR.bed bed (peaks) 2.7 MB
ENCFF562INS.bed bed (peaks) 1.0 MB
ENCFF567MGK.bed bed (peaks) 432.6 KB
ENCFF611POQ.bigWig bigWig (plus strand signal of unique reads) 23.6 MB
ENCFF622BNJ.bigBed bigBed (peaks) 5.2 MB
ENCFF631SCU.fastq fastq (reads) 620.2 MB
ENCFF644FFX.bed bed (peaks) 2.7 MB
ENCFF655OVT.fastq fastq (reads) 702.8 MB
ENCFF678RVK.bigWig bigWig (minus strand signal of unique reads) 23.3 MB
ENCFF691NBP.bigBed bigBed (peaks) 6.0 MB
ENCFF706VIH.bigBed bigBed (peaks) 2.4 MB
ENCFF715TOV.bigWig bigWig (minus strand signal of unique reads) 22.7 MB
ENCFF724COO.bigBed bigBed (peaks) 6.1 MB
ENCFF746XLE.bed bed (peaks) 422.0 KB
ENCFF749RQN.bigWig bigWig (minus strand signal of unique reads) 22.5 MB
ENCFF829JJE.bigWig bigWig (plus strand signal of unique reads) 23.0 MB
ENCFF841ECJ.fastq fastq (reads) 763.1 MB
ENCFF914IQD.bigBed bigBed (peaks) 6.1 MB
ENCFF916BBS.bam bam (alignments) 684.1 MB
ENCFF923XZP.bed bed (peaks) 2.4 MB
ENCSR941GJG ENCSR via encode_api

eCLIP control experiment on HepG2 against U2AF1

Homo sapiens
8 data files
FileTypeSize
ENCFF036XAD.fastq fastq (reads) 453.6 MB
ENCFF076WAG.bam bam (alignments) 292.9 MB
ENCFF189CPD.fastq fastq (reads) 436.9 MB
ENCFF241MHK.bigWig bigWig (minus strand signal of unique reads) 14.4 MB
ENCFF390LHZ.bigWig bigWig (minus strand signal of unique reads) 14.5 MB
ENCFF553PCH.bigWig bigWig (plus strand signal of unique reads) 15.0 MB
ENCFF664JCF.bigWig bigWig (plus strand signal of unique reads) 14.7 MB
ENCFF753HXO.bam bam (alignments) 290.9 MB
ENCSR655BRZ ENCSR via encode_api

eCLIP control experiment on HepG2 against BCCIP

Homo sapiens
8 data files
FileTypeSize
ENCFF216CAI.bigWig bigWig (minus strand signal of unique reads) 5.7 MB
ENCFF371GVL.fastq fastq (reads) 313.5 MB
ENCFF421BZA.bam bam (alignments) 115.0 MB
ENCFF487PQZ.bam bam (alignments) 116.5 MB
ENCFF500SVA.bigWig bigWig (plus strand signal of unique reads) 5.8 MB
ENCFF636XDP.bigWig bigWig (minus strand signal of unique reads) 5.6 MB
ENCFF945LNO.bigWig bigWig (plus strand signal of unique reads) 5.9 MB
ENCFF996LKZ.fastq fastq (reads) 326.0 MB
ENCSR224SND ENCSR via encode_api

eCLIP control experiment on K562 against DHX30

Homo sapiens
8 data files
FileTypeSize
ENCFF245WDH.fastq fastq (reads) 743.1 MB
ENCFF325PKM.bam bam (alignments) 856.0 MB
ENCFF418SOC.fastq fastq (reads) 835.7 MB
ENCFF620NIR.bigWig bigWig (plus strand signal of unique reads) 39.5 MB
ENCFF703NSH.bam bam (alignments) 870.2 MB
ENCFF754IIK.bigWig bigWig (minus strand signal of unique reads) 38.3 MB
ENCFF782MCB.bigWig bigWig (plus strand signal of unique reads) 40.1 MB
ENCFF996RON.bigWig bigWig (minus strand signal of unique reads) 38.9 MB
ENCSR384KAN ENCSR via encode_api

eCLIP experiment on HepG2 against PTBP1

Homo sapiens
34 data files
FileTypeSize
ENCFF051PIE.bigWig bigWig (minus strand signal of unique reads) 18.2 MB
ENCFF052DNE.bigWig bigWig (plus strand signal of unique reads) 19.7 MB
ENCFF059MNT.bed bed (peaks) 255.0 KB
ENCFF100OEX.bed bed (peaks) 2.6 MB
ENCFF105OLG.bed bed (peaks) 853.2 KB
ENCFF130PWU.bed bed (peaks) 1.7 MB
ENCFF154BAE.bed bed (peaks) 1.8 MB
ENCFF170SCU.bed bed (peaks) 183.2 KB
ENCFF173FHO.bed bed (peaks) 334.0 KB
ENCFF176JNE.fastq fastq (reads) 568.8 MB
ENCFF216WAA.bigBed bigBed (peaks) 5.0 MB
ENCFF245YUN.bigWig bigWig (plus strand signal of unique reads) 18.9 MB
ENCFF295MQP.bam bam (alignments) 553.4 MB
ENCFF301FYI.bigBed bigBed (peaks) 5.0 MB
ENCFF320OEB.bigWig bigWig (plus strand signal of unique reads) 27.7 MB
ENCFF363UDO.bigWig bigWig (plus strand signal of unique reads) 27.1 MB
ENCFF386UIG.bam bam (alignments) 343.9 MB
ENCFF395VNE.bam bam (alignments) 364.3 MB
ENCFF471GJE.bed bed (peaks) 2.6 MB
ENCFF515WDT.fastq fastq (reads) 533.3 MB
ENCFF542ACI.bigWig bigWig (minus strand signal of unique reads) 27.1 MB
ENCFF563KDH.bigBed bigBed (peaks) 592.5 KB
ENCFF609IKI.bigWig bigWig (minus strand signal of unique reads) 19.0 MB
ENCFF689VFH.bed bed (peaks) 695.2 KB
ENCFF696ZPD.bigBed bigBed (peaks) 3.7 MB
ENCFF722NCH.bigBed bigBed (peaks) 719.7 KB
ENCFF726SQU.bed bed (peaks) 179.3 KB
ENCFF771NAP.bigBed bigBed (peaks) 1.9 MB
ENCFF786LWX.bigBed bigBed (peaks) 1.3 MB
ENCFF795DEV.bigBed bigBed (peaks) 3.6 MB
ENCFF824TZM.fastq fastq (reads) 533.4 MB
ENCFF921MMF.fastq fastq (reads) 505.3 MB
ENCFF936SHU.bigWig bigWig (minus strand signal of unique reads) 26.5 MB
ENCFF938PTT.bam bam (alignments) 569.1 MB
ENCSR081WUU ENCSR via encode_api

eCLIP control experiment on HepG2 against TBRG4

Homo sapiens
8 data files
FileTypeSize
ENCFF082JCZ.bam bam (alignments) 458.3 MB
ENCFF102ZRL.bigWig bigWig (plus strand signal of unique reads) 20.8 MB
ENCFF228SIR.bigWig bigWig (minus strand signal of unique reads) 20.4 MB
ENCFF312KNQ.fastq fastq (reads) 656.1 MB
ENCFF384XQK.bigWig bigWig (minus strand signal of unique reads) 20.6 MB
ENCFF438RDQ.bigWig bigWig (plus strand signal of unique reads) 21.1 MB
ENCFF727FEM.fastq fastq (reads) 688.8 MB
ENCFF949QUQ.bam bam (alignments) 465.0 MB
ENCSR207DWI ENCSR via encode_api

eCLIP control experiment on K562 against DDX6

Homo sapiens
8 data files
FileTypeSize
ENCFF157LAQ.bigWig bigWig (minus strand signal of unique reads) 22.1 MB
ENCFF162THS.bigWig bigWig (plus strand signal of unique reads) 22.5 MB
ENCFF301TAX.fastq fastq (reads) 651.9 MB
ENCFF398FVI.bigWig bigWig (plus strand signal of unique reads) 22.9 MB
ENCFF510SNL.fastq fastq (reads) 607.3 MB
ENCFF593SPI.bam bam (alignments) 492.2 MB
ENCFF604TNC.bigWig bigWig (minus strand signal of unique reads) 21.7 MB
ENCFF982ORK.bam bam (alignments) 484.3 MB
ENCSR506EIW ENCSR via encode_api

eCLIP control experiment on HepG2 against SFPQ

Homo sapiens
8 data files
FileTypeSize
ENCFF017QIP.bigWig bigWig (plus strand signal of unique reads) 27.5 MB
ENCFF163HDX.fastq fastq (reads) 538.7 MB
ENCFF257DFX.bigWig bigWig (minus strand signal of unique reads) 27.7 MB
ENCFF302WLD.bigWig bigWig (plus strand signal of unique reads) 28.0 MB
ENCFF526FTD.fastq fastq (reads) 575.6 MB
ENCFF750AIQ.bigWig bigWig (minus strand signal of unique reads) 26.9 MB
ENCFF839ZIO.bam bam (alignments) 615.3 MB
ENCFF949MMS.bam bam (alignments) 627.2 MB
ENCSR308RMD ENCSR via encode_api

eCLIP control experiment on K562 against EXOSC5

Homo sapiens
8 data files
FileTypeSize
ENCFF044BSI.bam bam (alignments) 336.1 MB
ENCFF156NIJ.fastq fastq (reads) 686.6 MB
ENCFF243MGY.bigWig bigWig (minus strand signal of unique reads) 18.2 MB
ENCFF332UNI.bam bam (alignments) 339.7 MB
ENCFF339YTF.bigWig bigWig (plus strand signal of unique reads) 18.9 MB
ENCFF577TAB.fastq fastq (reads) 620.7 MB
ENCFF885TCI.bigWig bigWig (minus strand signal of unique reads) 17.9 MB
ENCFF921KOH.bigWig bigWig (plus strand signal of unique reads) 18.6 MB
ENCSR835ZOK ENCSR via encode_api

eCLIP control experiment on HepG2 against GRWD1

Homo sapiens
8 data files
FileTypeSize
ENCFF112YNS.bigWig bigWig (plus strand signal of unique reads) 26.4 MB
ENCFF138IDT.fastq fastq (reads) 651.6 MB
ENCFF305DED.fastq fastq (reads) 685.1 MB
ENCFF403RNH.bam bam (alignments) 588.4 MB
ENCFF677YGL.bigWig bigWig (plus strand signal of unique reads) 26.7 MB
ENCFF732COU.bigWig bigWig (minus strand signal of unique reads) 26.6 MB
ENCFF842JTZ.bigWig bigWig (minus strand signal of unique reads) 25.9 MB
ENCFF950JUB.bam bam (alignments) 597.0 MB
ENCSR828ALT ENCSR via encode_api

eCLIP control experiment on HepG2 against CDC40

Homo sapiens
8 data files
FileTypeSize
ENCFF127GEV.bam bam (alignments) 635.8 MB
ENCFF146LGF.bigWig bigWig (minus strand signal of unique reads) 28.9 MB
ENCFF188PUE.fastq fastq (reads) 475.1 MB
ENCFF238HQO.fastq fastq (reads) 506.0 MB
ENCFF517ENZ.bigWig bigWig (plus strand signal of unique reads) 29.3 MB
ENCFF574ISZ.bigWig bigWig (plus strand signal of unique reads) 28.7 MB
ENCFF656NLF.bam bam (alignments) 629.5 MB
ENCFF792MED.bigWig bigWig (minus strand signal of unique reads) 28.6 MB
ENCSR921SHJ ENCSR via encode_api

eCLIP control experiment on K562 against NCBP2

Homo sapiens
8 data files
FileTypeSize
ENCFF009XXJ.bigWig bigWig (plus strand signal of unique reads) 11.9 MB
ENCFF074LHS.bam bam (alignments) 230.2 MB
ENCFF093FNE.fastq fastq (reads) 706.9 MB
ENCFF184DBI.fastq fastq (reads) 726.6 MB
ENCFF569ICA.bigWig bigWig (minus strand signal of unique reads) 11.2 MB
ENCFF627PAV.bigWig bigWig (minus strand signal of unique reads) 11.4 MB
ENCFF645DVZ.bigWig bigWig (plus strand signal of unique reads) 11.6 MB
ENCFF792PAX.bam bam (alignments) 231.9 MB
ENCSR334OMC ENCSR via encode_api

eCLIP control experiment on HepG2 against DDX59

Homo sapiens
8 data files
FileTypeSize
ENCFF064OAG.bigWig bigWig (plus strand signal of unique reads) 30.0 MB
ENCFF077CNB.bigWig bigWig (plus strand signal of unique reads) 30.3 MB
ENCFF390FNJ.bam bam (alignments) 663.6 MB
ENCFF626WWC.bigWig bigWig (minus strand signal of unique reads) 29.6 MB
ENCFF678SWO.fastq fastq (reads) 556.4 MB
ENCFF810FHS.bigWig bigWig (minus strand signal of unique reads) 29.9 MB
ENCFF993FHX.fastq fastq (reads) 593.8 MB
ENCFF995MPE.bam bam (alignments) 656.4 MB
ENCSR643JMB ENCSR via encode_api

eCLIP control experiment on HepG2 against HNRNPUL1

Homo sapiens
8 data files
FileTypeSize
ENCFF129GZF.bigWig bigWig (plus strand signal of unique reads) 32.1 MB
ENCFF300XRU.fastq fastq (reads) 649.6 MB
ENCFF382BPZ.fastq fastq (reads) 615.8 MB
ENCFF558HAM.bigWig bigWig (plus strand signal of unique reads) 32.3 MB
ENCFF603RBW.bigWig bigWig (minus strand signal of unique reads) 31.4 MB
ENCFF635FQJ.bam bam (alignments) 754.2 MB
ENCFF647EHU.bam bam (alignments) 748.9 MB
ENCFF840PPW.bigWig bigWig (minus strand signal of unique reads) 32.0 MB
ENCSR157BRV ENCSR via encode_api

eCLIP control experiment on K562 against GTF2F1

Homo sapiens
8 data files
FileTypeSize
ENCFF057SJT.fastq fastq (reads) 530.6 MB
ENCFF135DTM.bam bam (alignments) 371.1 MB
ENCFF317QOW.fastq fastq (reads) 545.3 MB
ENCFF412TBZ.bigWig bigWig (plus strand signal of unique reads) 17.9 MB
ENCFF471ZFP.bam bam (alignments) 373.2 MB
ENCFF821SOM.bigWig bigWig (plus strand signal of unique reads) 18.0 MB
ENCFF850NEA.bigWig bigWig (minus strand signal of unique reads) 17.3 MB
ENCFF931JAI.bigWig bigWig (minus strand signal of unique reads) 17.4 MB
ENCSR670UPZ ENCSR via encode_api

eCLIP control experiment on HepG2 against SLTM

Homo sapiens
8 data files
FileTypeSize
ENCFF171JWT.bigWig bigWig (plus strand signal of unique reads) 24.0 MB
ENCFF262DRT.bam bam (alignments) 455.9 MB
ENCFF489KGX.fastq fastq (reads) 383.7 MB
ENCFF514JKI.bigWig bigWig (plus strand signal of unique reads) 24.2 MB
ENCFF596UYR.bam bam (alignments) 458.9 MB
ENCFF876NHB.bigWig bigWig (minus strand signal of unique reads) 23.7 MB
ENCFF956MVA.bigWig bigWig (minus strand signal of unique reads) 23.5 MB
ENCFF995SCZ.fastq fastq (reads) 407.7 MB
ENCSR925TYQ ENCSR via encode_api

eCLIP control experiment on K562 against SRSF1

Homo sapiens
8 data files
FileTypeSize
ENCFF017BEN.fastq fastq (reads) 571.4 MB
ENCFF160TSX.bigWig bigWig (minus strand signal of unique reads) 13.4 MB
ENCFF222JZO.bigWig bigWig (minus strand signal of unique reads) 13.3 MB
ENCFF376PZO.fastq fastq (reads) 582.9 MB
ENCFF563VJQ.bam bam (alignments) 287.9 MB
ENCFF772TJM.bigWig bigWig (plus strand signal of unique reads) 13.9 MB
ENCFF913MGS.bam bam (alignments) 287.6 MB
ENCFF914MGN.bigWig bigWig (plus strand signal of unique reads) 13.9 MB
ENCSR167OYL ENCSR via encode_api

eCLIP control experiment on HepG2 against SND1

Homo sapiens
8 data files
FileTypeSize
ENCFF178GMB.bigWig bigWig (minus strand signal of unique reads) 16.4 MB
ENCFF259IKG.bigWig bigWig (plus strand signal of unique reads) 17.0 MB
ENCFF354GQD.fastq fastq (reads) 460.7 MB
ENCFF358QQZ.bigWig bigWig (plus strand signal of unique reads) 16.8 MB
ENCFF431GGI.fastq fastq (reads) 441.7 MB
ENCFF543YCY.bam bam (alignments) 344.6 MB
ENCFF635IJV.bigWig bigWig (minus strand signal of unique reads) 16.5 MB
ENCFF774RKG.bam bam (alignments) 346.3 MB
ENCSR575DKE ENCSR via encode_api

eCLIP control experiment on K562 against FTO

Homo sapiens
8 data files
FileTypeSize
ENCFF383LSV.bigWig bigWig (plus strand signal of unique reads) 23.1 MB
ENCFF506OAM.bam bam (alignments) 509.6 MB
ENCFF527PPO.bigWig bigWig (plus strand signal of unique reads) 22.7 MB
ENCFF604ASW.bigWig bigWig (minus strand signal of unique reads) 21.9 MB
ENCFF679NRW.fastq fastq (reads) 738.4 MB
ENCFF687LVV.bigWig bigWig (minus strand signal of unique reads) 22.3 MB
ENCFF755GLY.bam bam (alignments) 500.3 MB
ENCFF757EAS.fastq fastq (reads) 659.2 MB
ENCSR687HHB ENCSR via encode_api

eCLIP control experiment on K562 against XRCC6

Homo sapiens
8 data files
FileTypeSize
ENCFF015IHV.bigWig bigWig (minus strand signal of unique reads) 33.3 MB
ENCFF018HDR.fastq fastq (reads) 865.8 MB
ENCFF043FPL.bigWig bigWig (plus strand signal of unique reads) 35.5 MB
ENCFF314GJB.fastq fastq (reads) 900.9 MB
ENCFF424DIC.bam bam (alignments) 786.6 MB
ENCFF639NLY.bigWig bigWig (minus strand signal of unique reads) 34.3 MB
ENCFF688WAC.bigWig bigWig (plus strand signal of unique reads) 34.5 MB
ENCFF984WTC.bam bam (alignments) 801.3 MB
ENCSR439GXW ENCSR via encode_api

eCLIP control experiment on K562 against PUM2

Homo sapiens
8 data files
FileTypeSize
ENCFF034QCL.bigWig bigWig (minus strand signal of unique reads) 45.2 MB
ENCFF043ERY.bam bam (alignments) 1.0 GB
ENCFF495ZPY.fastq fastq (reads) 917.2 MB
ENCFF557YVW.bigWig bigWig (plus strand signal of unique reads) 45.9 MB
ENCFF616FCF.fastq fastq (reads) 1020.9 MB
ENCFF776BXG.bigWig bigWig (minus strand signal of unique reads) 44.4 MB
ENCFF786ZZB.bam bam (alignments) 1.1 GB
ENCFF880UXZ.bigWig bigWig (plus strand signal of unique reads) 46.8 MB
ENCSR391GLS ENCSR via encode_api

eCLIP control experiment on HepG2 against CSTF2T

Homo sapiens
8 data files
FileTypeSize
ENCFF073SGO.bam bam (alignments) 643.4 MB
ENCFF094OOZ.fastq fastq (reads) 682.3 MB
ENCFF302NNV.bigWig bigWig (plus strand signal of unique reads) 28.5 MB
ENCFF384VPJ.bigWig bigWig (plus strand signal of unique reads) 28.7 MB
ENCFF539YZX.bam bam (alignments) 647.4 MB
ENCFF586TVW.bigWig bigWig (minus strand signal of unique reads) 27.8 MB
ENCFF895RAR.fastq fastq (reads) 668.3 MB
ENCFF979VAZ.bigWig bigWig (minus strand signal of unique reads) 27.6 MB
ENCSR616BTD ENCSR via encode_api

eCLIP control experiment on K562 against DGCR8

Homo sapiens
8 data files
FileTypeSize
ENCFF291ITN.bam bam (alignments) 296.2 MB
ENCFF379FKC.bam bam (alignments) 298.1 MB
ENCFF389CTP.fastq fastq (reads) 333.6 MB
ENCFF500PPL.bigWig bigWig (plus strand signal of unique reads) 14.7 MB
ENCFF544FVH.bigWig bigWig (minus strand signal of unique reads) 14.4 MB
ENCFF757BQX.bigWig bigWig (plus strand signal of unique reads) 14.9 MB
ENCFF917MFZ.bigWig bigWig (minus strand signal of unique reads) 14.2 MB
ENCFF933TIF.fastq fastq (reads) 333.2 MB
ENCSR924OLO ENCSR via encode_api

eCLIP control experiment on K562 against TARDBP

Homo sapiens
8 data files
FileTypeSize
ENCFF250LFZ.bigWig bigWig (plus strand signal of unique reads) 9.3 MB
ENCFF333DTJ.fastq fastq (reads) 266.1 MB
ENCFF394DDJ.bam bam (alignments) 186.6 MB
ENCFF558NTZ.fastq fastq (reads) 250.5 MB
ENCFF607TDB.bigWig bigWig (plus strand signal of unique reads) 9.2 MB
ENCFF887NON.bam bam (alignments) 185.6 MB
ENCFF936VVM.bigWig bigWig (minus strand signal of unique reads) 8.9 MB
ENCFF947JGK.bigWig bigWig (minus strand signal of unique reads) 8.8 MB
ENCSR653CNZ ENCSR via encode_api

eCLIP control experiment on K562 against TAF15

Homo sapiens
8 data files
FileTypeSize
ENCFF053BXG.bam bam (alignments) 457.1 MB
ENCFF252UPV.bam bam (alignments) 454.8 MB
ENCFF277JPO.bigWig bigWig (minus strand signal of unique reads) 19.5 MB
ENCFF334CSX.bigWig bigWig (plus strand signal of unique reads) 20.1 MB
ENCFF367IMM.bigWig bigWig (minus strand signal of unique reads) 19.4 MB
ENCFF868SVO.fastq fastq (reads) 513.2 MB
ENCFF895IJH.fastq fastq (reads) 519.9 MB
ENCFF908IFQ.bigWig bigWig (plus strand signal of unique reads) 20.2 MB
ENCSR562BJW ENCSR via encode_api

eCLIP control experiment on K562 against FXR1

Homo sapiens
8 data files
FileTypeSize
ENCFF047HSP.bam bam (alignments) 105.5 MB
ENCFF130TTZ.bigWig bigWig (plus strand signal of unique reads) 4.8 MB
ENCFF376FLH.bigWig bigWig (minus strand signal of unique reads) 4.6 MB
ENCFF585MMC.bigWig bigWig (plus strand signal of unique reads) 4.8 MB
ENCFF589FSV.bam bam (alignments) 105.4 MB
ENCFF608BOA.fastq fastq (reads) 106.9 MB
ENCFF742KQJ.fastq fastq (reads) 107.2 MB
ENCFF773SOP.bigWig bigWig (minus strand signal of unique reads) 4.6 MB
ENCSR344EGD ENCSR via encode_api

eCLIP control experiment on K562 against RBM22

Homo sapiens
8 data files
FileTypeSize
ENCFF006NOC.bigWig bigWig (plus strand signal of unique reads) 10.9 MB
ENCFF135PIG.fastq fastq (reads) 452.7 MB
ENCFF404SLQ.bigWig bigWig (plus strand signal of unique reads) 10.8 MB
ENCFF422MWK.bigWig bigWig (minus strand signal of unique reads) 10.5 MB
ENCFF556BXK.bam bam (alignments) 241.6 MB
ENCFF663GEE.bigWig bigWig (minus strand signal of unique reads) 10.4 MB
ENCFF672MVA.fastq fastq (reads) 452.6 MB
ENCFF802LNA.bam bam (alignments) 243.5 MB
ENCSR376KLZ ENCSR via encode_api

eCLIP control experiment on HepG2 against SUPV3L1

Homo sapiens
8 data files
FileTypeSize
ENCFF021OMD.bigWig bigWig (plus strand signal of unique reads) 27.5 MB
ENCFF142AIM.bigWig bigWig (minus strand signal of unique reads) 27.4 MB
ENCFF258APN.fastq fastq (reads) 600.6 MB
ENCFF295JKG.bigWig bigWig (plus strand signal of unique reads) 28.2 MB
ENCFF369GNR.bam bam (alignments) 620.1 MB
ENCFF504PBT.bigWig bigWig (minus strand signal of unique reads) 27.8 MB
ENCFF708EUI.fastq fastq (reads) 541.5 MB
ENCFF737MAB.bam bam (alignments) 611.6 MB
ENCSR752YLF ENCSR via encode_api

eCLIP control experiment on K562 against SERBP1

Homo sapiens
8 data files
FileTypeSize
ENCFF012GQR.fastq fastq (reads) 484.4 MB
ENCFF070MKB.bigWig bigWig (plus strand signal of unique reads) 13.5 MB
ENCFF166ZIY.bam bam (alignments) 291.2 MB
ENCFF257CGL.bam bam (alignments) 286.0 MB
ENCFF407AHP.bigWig bigWig (minus strand signal of unique reads) 13.1 MB
ENCFF736OAS.bigWig bigWig (plus strand signal of unique reads) 13.2 MB
ENCFF783AZJ.bigWig bigWig (minus strand signal of unique reads) 12.9 MB
ENCFF997VKX.fastq fastq (reads) 492.6 MB
ENCSR356GCJ ENCSR via encode_api

eCLIP control experiment on K562 against TIA1

Homo sapiens
11 data files
FileTypeSize
ENCFF165FRB.fastq fastq (reads) 2.3 GB
ENCFF402DIC.bigWig bigWig (plus strand signal of unique reads) 28.1 MB
ENCFF441RYK.fastq fastq (reads) 1.8 GB
ENCFF504YTU.fastq fastq (reads) 2.0 GB
ENCFF523SWX.bigWig bigWig (minus strand signal of unique reads) 27.6 MB
ENCFF608ODO.bam bam (alignments) 262.4 MB
ENCFF644ZWS.bam bam (alignments) 442.4 MB
ENCFF698IQD.bigWig bigWig (plus strand signal of unique reads) 28.6 MB
ENCFF754WQS.fastq fastq (reads) 2.1 GB
ENCFF892JNM.bigWig bigWig (minus strand signal of unique reads) 27.1 MB
ENCFF910OEJ.bam bam (alignments) 445.4 MB
ENCSR056RZV ENCSR via encode_api

eCLIP control experiment on HepG2 against FUBP3

Homo sapiens
8 data files
FileTypeSize
ENCFF024OZW.fastq fastq (reads) 405.5 MB
ENCFF041QFN.bigWig bigWig (plus strand signal of unique reads) 16.2 MB
ENCFF370QJE.bam bam (alignments) 347.5 MB
ENCFF414YHF.fastq fastq (reads) 450.0 MB
ENCFF802EVV.bigWig bigWig (minus strand signal of unique reads) 16.1 MB
ENCFF864ZGV.bigWig bigWig (plus strand signal of unique reads) 16.4 MB
ENCFF878TBN.bam bam (alignments) 352.9 MB
ENCFF889KML.bigWig bigWig (minus strand signal of unique reads) 15.8 MB
ENCSR895TTM ENCSR via encode_api

eCLIP control experiment on HepG2 against SUGP2

Homo sapiens
8 data files
FileTypeSize
ENCFF021LLL.bam bam (alignments) 786.3 MB
ENCFF032POO.bigWig bigWig (plus strand signal of unique reads) 34.7 MB
ENCFF059GAD.bigWig bigWig (minus strand signal of unique reads) 34.2 MB
ENCFF126HSC.fastq fastq (reads) 780.1 MB
ENCFF245GQM.bigWig bigWig (minus strand signal of unique reads) 33.8 MB
ENCFF496GNO.bigWig bigWig (plus strand signal of unique reads) 34.3 MB
ENCFF598EKW.fastq fastq (reads) 707.9 MB
ENCFF734JUL.bam bam (alignments) 796.4 MB
ENCSR785VKF ENCSR via encode_api

eCLIP control experiment on HepG2 against DROSHA

Homo sapiens
8 data files
FileTypeSize
ENCFF058SWB.bigWig bigWig (plus strand signal of unique reads) 24.7 MB
ENCFF064NLH.fastq fastq (reads) 404.8 MB
ENCFF485KGB.bigWig bigWig (minus strand signal of unique reads) 24.6 MB
ENCFF687BMD.fastq fastq (reads) 448.1 MB
ENCFF797RXZ.bam bam (alignments) 495.5 MB
ENCFF854DJS.bigWig bigWig (plus strand signal of unique reads) 25.2 MB
ENCFF960QIE.bam bam (alignments) 486.8 MB
ENCFF991KAM.bigWig bigWig (minus strand signal of unique reads) 24.1 MB
ENCSR696PRX ENCSR via encode_api

eCLIP control experiment on K562 against AARS

Homo sapiens
8 data files
FileTypeSize
ENCFF082RVJ.bigWig bigWig (plus strand signal of unique reads) 36.8 MB
ENCFF159ZFD.fastq fastq (reads) 933.9 MB
ENCFF268ZWV.bigWig bigWig (minus strand signal of unique reads) 35.2 MB
ENCFF273HDK.bam bam (alignments) 877.7 MB
ENCFF430BUF.bigWig bigWig (plus strand signal of unique reads) 36.5 MB
ENCFF595YFZ.fastq fastq (reads) 904.4 MB
ENCFF703VEL.bigWig bigWig (minus strand signal of unique reads) 35.5 MB
ENCFF713BCH.bam bam (alignments) 869.9 MB
ENCSR013CTQ ENCSR via encode_api

eCLIP experiment on K562 against EXOSC5

Homo sapiens
28 data files
FileTypeSize
ENCFF070QII.bam bam (alignments) 257.3 MB
ENCFF127WRQ.bed bed (peaks) 1.4 MB
ENCFF140TMZ.bigBed bigBed (peaks) 2.7 MB
ENCFF164EXA.bigWig bigWig (minus strand signal of unique reads) 15.9 MB
ENCFF193VEK.fastq fastq (reads) 605.5 MB
ENCFF293TAU.fastq fastq (reads) 589.0 MB
ENCFF344ZBI.bam bam (alignments) 255.1 MB
ENCFF357QDX.fastq fastq (reads) 647.7 MB
ENCFF418BNV.bigWig bigWig (plus strand signal of unique reads) 16.7 MB
ENCFF427AAU.bed bed (peaks) 237.1 KB
ENCFF517HCP.bigBed bigBed (peaks) 2.6 MB
ENCFF532CWB.bed bed (peaks) 1.4 MB
ENCFF609MDJ.fastq fastq (reads) 627.9 MB
ENCFF614IEN.bigBed bigBed (peaks) 2.6 MB
ENCFF623VXC.bigWig bigWig (minus strand signal of unique reads) 15.8 MB
ENCFF624PJV.bigWig bigWig (plus strand signal of unique reads) 16.8 MB
ENCFF710TEK.bam bam (alignments) 258.7 MB
ENCFF741JYV.bigWig bigWig (plus strand signal of unique reads) 16.5 MB
ENCFF781WWB.bed bed (peaks) 1.3 MB
ENCFF858CSS.bed bed (peaks) 238.9 KB
ENCFF876TQQ.bed bed (peaks) 514.8 KB
ENCFF887KRP.bed bed (peaks) 513.0 KB
ENCFF890CZT.bigBed bigBed (peaks) 2.7 MB
ENCFF917THD.bigWig bigWig (minus strand signal of unique reads) 15.9 MB
ENCFF918VFZ.bed bed (peaks) 1.4 MB
ENCFF923WWZ.bigWig bigWig (plus strand signal of unique reads) 17.0 MB
ENCFF925JID.bam bam (alignments) 253.8 MB
ENCFF942QUP.bigWig bigWig (minus strand signal of unique reads) 15.8 MB
ENCSR119AFY ENCSR via encode_api

eCLIP control experiment on K562 against FASTKD2

Homo sapiens
8 data files
FileTypeSize
ENCFF154DNE.bigWig bigWig (plus strand signal of unique reads) 41.9 MB
ENCFF197INO.fastq fastq (reads) 1.1 GB
ENCFF297BGD.bigWig bigWig (minus strand signal of unique reads) 39.7 MB
ENCFF350APU.bigWig bigWig (plus strand signal of unique reads) 41.1 MB
ENCFF367FDD.bam bam (alignments) 975.8 MB
ENCFF507IXS.fastq fastq (reads) 1.1 GB
ENCFF882EEN.bigWig bigWig (minus strand signal of unique reads) 40.5 MB
ENCFF928RKY.bam bam (alignments) 955.8 MB
ENCSR195IWB ENCSR via encode_api

eCLIP control experiment on K562 against DDX24

Homo sapiens
8 data files
FileTypeSize
ENCFF113HCY.fastq fastq (reads) 744.8 MB
ENCFF327VQR.bam bam (alignments) 635.2 MB
ENCFF407HUR.bam bam (alignments) 651.0 MB
ENCFF480NVQ.bigWig bigWig (plus strand signal of unique reads) 30.4 MB
ENCFF689NNO.bigWig bigWig (minus strand signal of unique reads) 29.5 MB
ENCFF696XDE.bigWig bigWig (minus strand signal of unique reads) 28.5 MB
ENCFF739MOT.fastq fastq (reads) 702.6 MB
ENCFF755IBA.bigWig bigWig (plus strand signal of unique reads) 29.4 MB
ENCSR952UOL ENCSR via encode_api

eCLIP control experiment on K562 against LSM11

Homo sapiens
8 data files
FileTypeSize
ENCFF037JOL.bam bam (alignments) 464.5 MB
ENCFF122YZY.fastq fastq (reads) 577.3 MB
ENCFF308SPS.fastq fastq (reads) 498.6 MB
ENCFF311ARO.bigWig bigWig (plus strand signal of unique reads) 22.0 MB
ENCFF587LFL.bigWig bigWig (minus strand signal of unique reads) 20.8 MB
ENCFF711QBZ.bigWig bigWig (minus strand signal of unique reads) 21.2 MB
ENCFF816DYE.bam bam (alignments) 456.5 MB
ENCFF819ZIQ.bigWig bigWig (plus strand signal of unique reads) 21.5 MB
ENCSR687GJH ENCSR via encode_api

eCLIP control experiment on K562 against TROVE2

Homo sapiens
8 data files
FileTypeSize
ENCFF003UEN.bigWig bigWig (plus strand signal of unique reads) 32.1 MB
ENCFF015EIO.fastq fastq (reads) 675.1 MB
ENCFF228JKT.fastq fastq (reads) 745.3 MB
ENCFF332OGT.bigWig bigWig (plus strand signal of unique reads) 31.5 MB
ENCFF421ZLE.bigWig bigWig (minus strand signal of unique reads) 30.4 MB
ENCFF497KTD.bam bam (alignments) 682.9 MB
ENCFF509QCQ.bigWig bigWig (minus strand signal of unique reads) 31.0 MB
ENCFF536YVM.bam bam (alignments) 669.4 MB
ENCSR494JFR ENCSR via encode_api

eCLIP control experiment on K562 against RPS3

Homo sapiens
8 data files
FileTypeSize
ENCFF175VIN.bigWig bigWig (minus strand signal of unique reads) 29.2 MB
ENCFF672BYS.fastq fastq (reads) 954.7 MB
ENCFF676RIE.bigWig bigWig (plus strand signal of unique reads) 30.2 MB
ENCFF700HKI.bam bam (alignments) 574.8 MB
ENCFF744CGY.fastq fastq (reads) 1.0 GB
ENCFF745ZUQ.bigWig bigWig (plus strand signal of unique reads) 29.7 MB
ENCFF892BBY.bigWig bigWig (minus strand signal of unique reads) 28.8 MB
ENCFF987HHN.bam bam (alignments) 581.6 MB
ENCSR479XOI ENCSR via encode_api

eCLIP control experiment on HepG2 against NKRF

Homo sapiens
8 data files
FileTypeSize
ENCFF053RMP.bigWig bigWig (plus strand signal of unique reads) 28.1 MB
ENCFF085NXC.bam bam (alignments) 567.5 MB
ENCFF224SVT.bigWig bigWig (minus strand signal of unique reads) 27.1 MB
ENCFF273RFL.bam bam (alignments) 580.1 MB
ENCFF374APS.fastq fastq (reads) 729.9 MB
ENCFF489BZK.bigWig bigWig (plus strand signal of unique reads) 27.2 MB
ENCFF837GYT.fastq fastq (reads) 676.7 MB
ENCFF840LKD.bigWig bigWig (minus strand signal of unique reads) 26.3 MB
ENCSR317PWQ ENCSR via encode_api

eCLIP control experiment on HepG2 against RBM15

Homo sapiens
8 data files
FileTypeSize
ENCFF038DLJ.bigWig bigWig (minus strand signal of unique reads) 17.7 MB
ENCFF314IKA.fastq fastq (reads) 469.5 MB
ENCFF559GCX.bigWig bigWig (plus strand signal of unique reads) 18.3 MB
ENCFF807WFL.bam bam (alignments) 374.1 MB
ENCFF809OPL.bam bam (alignments) 367.2 MB
ENCFF836BAF.bigWig bigWig (plus strand signal of unique reads) 18.6 MB
ENCFF882PYI.fastq fastq (reads) 444.4 MB
ENCFF982GAJ.bigWig bigWig (minus strand signal of unique reads) 18.1 MB
ENCSR346IHS ENCSR via encode_api

eCLIP control experiment on K562 against PPIL4

Homo sapiens
8 data files
FileTypeSize
ENCFF027EPH.bigWig bigWig (minus strand signal of unique reads) 12.3 MB
ENCFF051QKU.bigWig bigWig (plus strand signal of unique reads) 12.5 MB
ENCFF096VVP.bigWig bigWig (minus strand signal of unique reads) 12.1 MB
ENCFF221USS.fastq fastq (reads) 450.9 MB
ENCFF296UEW.bam bam (alignments) 246.9 MB
ENCFF459RGB.bam bam (alignments) 251.3 MB
ENCFF674WSW.bigWig bigWig (plus strand signal of unique reads) 12.8 MB
ENCFF932XAN.fastq fastq (reads) 448.1 MB
ENCSR679NKE ENCSR via encode_api

eCLIP control experiment on K562 against LARP4

Homo sapiens
8 data files
FileTypeSize
ENCFF171EBM.bigWig bigWig (plus strand signal of unique reads) 21.7 MB
ENCFF246ZNB.fastq fastq (reads) 545.2 MB
ENCFF305KSU.bigWig bigWig (minus strand signal of unique reads) 21.1 MB
ENCFF586LZV.fastq fastq (reads) 517.3 MB
ENCFF729JDN.bigWig bigWig (plus strand signal of unique reads) 22.3 MB
ENCFF776GPK.bam bam (alignments) 441.3 MB
ENCFF795SCL.bigWig bigWig (minus strand signal of unique reads) 21.6 MB
ENCFF848GHI.bam bam (alignments) 451.2 MB
ENCSR512EZA ENCSR via encode_api

eCLIP control experiment on K562 against TBRG4

Homo sapiens
8 data files
FileTypeSize
ENCFF083OHX.bam bam (alignments) 433.3 MB
ENCFF365ZFZ.bam bam (alignments) 428.0 MB
ENCFF429NCV.bigWig bigWig (minus strand signal of unique reads) 18.5 MB
ENCFF469JBA.bigWig bigWig (plus strand signal of unique reads) 19.5 MB
ENCFF491PHA.fastq fastq (reads) 683.9 MB
ENCFF698NCA.bigWig bigWig (plus strand signal of unique reads) 19.2 MB
ENCFF741GJZ.bigWig bigWig (minus strand signal of unique reads) 18.8 MB
ENCFF986GFV.fastq fastq (reads) 698.3 MB
ENCSR266UVO ENCSR via encode_api

eCLIP control experiment on K562 against EFTUD2

Homo sapiens
8 data files
FileTypeSize
ENCFF051JXL.bigWig bigWig (plus strand signal of unique reads) 31.0 MB
ENCFF283JNS.fastq fastq (reads) 773.8 MB
ENCFF290HUG.bigWig bigWig (minus strand signal of unique reads) 29.9 MB
ENCFF480DFF.fastq fastq (reads) 746.1 MB
ENCFF640KTQ.bam bam (alignments) 698.2 MB
ENCFF769KKV.bigWig bigWig (plus strand signal of unique reads) 31.7 MB
ENCFF786JER.bam bam (alignments) 688.4 MB
ENCFF897JTV.bigWig bigWig (minus strand signal of unique reads) 30.6 MB
ENCSR755PSW ENCSR via encode_api

eCLIP control experiment on HepG2 against EIF3D

Homo sapiens
8 data files
FileTypeSize
ENCFF222TZU.bam bam (alignments) 740.2 MB
ENCFF281FID.bigWig bigWig (plus strand signal of unique reads) 30.9 MB
ENCFF400HLC.bam bam (alignments) 726.0 MB
ENCFF419ATF.bigWig bigWig (minus strand signal of unique reads) 29.9 MB
ENCFF432GMP.fastq fastq (reads) 786.5 MB
ENCFF491VMT.bigWig bigWig (minus strand signal of unique reads) 30.7 MB
ENCFF576RGH.fastq fastq (reads) 816.4 MB
ENCFF615NKF.bigWig bigWig (plus strand signal of unique reads) 30.4 MB
ENCSR299AAB ENCSR via encode_api

eCLIP control experiment on K562 against HNRNPL

Homo sapiens
8 data files
FileTypeSize
ENCFF209EIX.bam bam (alignments) 428.2 MB
ENCFF539IDG.bigWig bigWig (plus strand signal of unique reads) 20.5 MB
ENCFF545SRQ.bigWig bigWig (minus strand signal of unique reads) 19.8 MB
ENCFF639SDC.bam bam (alignments) 423.1 MB
ENCFF796BVT.fastq fastq (reads) 586.6 MB
ENCFF818FZZ.bigWig bigWig (minus strand signal of unique reads) 19.6 MB
ENCFF862OAB.fastq fastq (reads) 568.6 MB
ENCFF945GXS.bigWig bigWig (plus strand signal of unique reads) 20.3 MB
ENCSR881RJL ENCSR via encode_api

eCLIP control experiment on K562 against RPS11

Homo sapiens
8 data files
FileTypeSize
ENCFF067EPR.bam bam (alignments) 280.6 MB
ENCFF159ANK.fastq fastq (reads) 592.7 MB
ENCFF192VLG.bigWig bigWig (minus strand signal of unique reads) 13.6 MB
ENCFF194GKN.bigWig bigWig (plus strand signal of unique reads) 14.5 MB
ENCFF370VFC.bigWig bigWig (minus strand signal of unique reads) 13.9 MB
ENCFF431WVH.fastq fastq (reads) 620.4 MB
ENCFF536KJC.bam bam (alignments) 286.0 MB
ENCFF838NWM.bigWig bigWig (plus strand signal of unique reads) 14.2 MB
ENCSR454OFD ENCSR via encode_api

eCLIP control experiment on HepG2 against DDX55

Homo sapiens
8 data files
FileTypeSize
ENCFF188HQX.bigWig bigWig (plus strand signal of unique reads) 24.6 MB
ENCFF227AUX.bigWig bigWig (plus strand signal of unique reads) 25.4 MB
ENCFF284VKE.fastq fastq (reads) 556.1 MB
ENCFF372ONC.bigWig bigWig (minus strand signal of unique reads) 24.2 MB
ENCFF419WYK.bam bam (alignments) 526.7 MB
ENCFF426NRC.fastq fastq (reads) 617.7 MB
ENCFF525BGY.bam bam (alignments) 539.2 MB
ENCFF635CCR.bigWig bigWig (minus strand signal of unique reads) 25.0 MB
ENCSR098VKQ ENCSR via encode_api

eCLIP control experiment on HepG2 against ZC3H11A

Homo sapiens
8 data files
FileTypeSize
ENCFF025DXI.bam bam (alignments) 610.6 MB
ENCFF102OYH.bam bam (alignments) 601.7 MB
ENCFF374COS.bigWig bigWig (plus strand signal of unique reads) 30.2 MB
ENCFF562ADU.bigWig bigWig (minus strand signal of unique reads) 29.8 MB
ENCFF612GEW.fastq fastq (reads) 636.0 MB
ENCFF657EOF.bigWig bigWig (plus strand signal of unique reads) 29.8 MB
ENCFF813QVI.bigWig bigWig (minus strand signal of unique reads) 29.4 MB
ENCFF854LFS.fastq fastq (reads) 559.2 MB
ENCSR594RFP ENCSR via encode_api

eCLIP control experiment on K562 against ZNF622

Homo sapiens
8 data files
FileTypeSize
ENCFF091KVP.bam bam (alignments) 705.2 MB
ENCFF406BSG.bigWig bigWig (plus strand signal of unique reads) 29.5 MB
ENCFF626LUV.fastq fastq (reads) 1001.5 MB
ENCFF664BQD.bigWig bigWig (minus strand signal of unique reads) 28.1 MB
ENCFF790DUN.bam bam (alignments) 699.7 MB
ENCFF795SBP.fastq fastq (reads) 975.1 MB
ENCFF922SZZ.bigWig bigWig (plus strand signal of unique reads) 29.3 MB
ENCFF980WWB.bigWig bigWig (minus strand signal of unique reads) 28.4 MB
ENCSR878HWU ENCSR via encode_api

eCLIP control experiment on HepG2 against EFTUD2

Homo sapiens
8 data files
FileTypeSize
ENCFF056AWB.bam bam (alignments) 828.7 MB
ENCFF131PIV.bigWig bigWig (plus strand signal of unique reads) 35.5 MB
ENCFF348XHW.bigWig bigWig (minus strand signal of unique reads) 36.0 MB
ENCFF427MYH.bigWig bigWig (plus strand signal of unique reads) 36.1 MB
ENCFF671ZYB.fastq fastq (reads) 744.9 MB
ENCFF723JLV.bam bam (alignments) 845.6 MB
ENCFF826QWS.fastq fastq (reads) 789.1 MB
ENCFF864HJS.bigWig bigWig (minus strand signal of unique reads) 35.4 MB
ENCSR638YHN ENCSR via encode_api

eCLIP control experiment on HepG2 against GRSF1

Homo sapiens
8 data files
FileTypeSize
ENCFF015RNL.fastq fastq (reads) 489.5 MB
ENCFF073MFR.bam bam (alignments) 328.4 MB
ENCFF172RGZ.bigWig bigWig (plus strand signal of unique reads) 16.2 MB
ENCFF174GAK.bigWig bigWig (minus strand signal of unique reads) 15.8 MB
ENCFF229LHL.bam bam (alignments) 336.4 MB
ENCFF277VRQ.bigWig bigWig (plus strand signal of unique reads) 16.5 MB
ENCFF632IKX.fastq fastq (reads) 448.6 MB
ENCFF865DDM.bigWig bigWig (minus strand signal of unique reads) 16.2 MB
ENCSR414RME ENCSR via encode_api

eCLIP control experiment on HepG2 against RBM5

Homo sapiens
8 data files
FileTypeSize
ENCFF021GAP.fastq fastq (reads) 533.3 MB
ENCFF094MLU.bigWig bigWig (minus strand signal of unique reads) 24.6 MB
ENCFF496ODC.bigWig bigWig (plus strand signal of unique reads) 24.4 MB
ENCFF613LRN.bam bam (alignments) 444.9 MB
ENCFF646LJL.bam bam (alignments) 453.9 MB
ENCFF749SQA.bigWig bigWig (plus strand signal of unique reads) 25.0 MB
ENCFF768UAP.bigWig bigWig (minus strand signal of unique reads) 24.1 MB
ENCFF783GFR.fastq fastq (reads) 612.4 MB

Potentially Related Datasets (5)

These accessions were text-mined from the PMC full text. They may be referenced for comparison, cited from other studies, or otherwise mentioned without being primary data for this paper.

ENCFF286GLL ENCFF ENCODE
ENCSR456FVU ENCSR ENCODE
ENCFF533XPJ ENCFF ENCODE
ENCFF321JIT ENCFF ENCODE
ENCFF986DBN ENCFF ENCODE