Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription.
Rui Xiao,
Jia-Yu Chen,
Zhengyu Liang,
Daji Luo,
Geng Chen,
Zhi John Lu,
Yang Chen,
Bing Zhou,
Hairi Li,
Xian Du,
Yang Yang,
Mingkui San,
Xintao Wei,
Wen Liu,
Eric Lécuyer,
Brenton R Graveley,
Gene W Yeo,
Christopher B Burge,
Michael Q Zhang,
Yu Zhou,
Xiang-Dong Fu
Cell
· 2019
· Vol. 178
(1)
· pp. 107-121.e18
Abstract
Increasing evidence suggests that transcriptional control and chromatin activities at large involve regulatory RNAs, which likely enlist specific RNA-binding proteins (RBPs). Although multiple RBPs have been implicated in transcription control, it has remained unclear how extensively RBPs directly act on chromatin. We embarked on a large-scale RBP ChIP-seq analysis, revealing widespread RBP presence in active chromatin regions in the human genome. Like transcription factors (TFs), RBPs also show strong preference for hotspots in the genome, particularly gene promoters, where their association is frequently linked to transcriptional output. Unsupervised clustering reveals extensive co-association between TFs and RBPs, as exemplified by YY1, a known RNA-dependent TF, and RBM25, an RBP involved in splicing regulation. Remarkably, RBM25 depletion attenuates all YY1-dependent activities, including chromatin binding, DNA looping, and transcription. We propose that various RBPs may enhance network interaction through harnessing regulatory RNAs to control transcription.
Publication Types
["Journal Article", "Research Support, N.I.H., Extramural", "Research Support, Non-U.S. Gov't"]
MeSH Terms
["Binding Sites", "Chromatin", "Gene Expression Regulation", "Genome, Human", "Hep G2 Cells", "Humans", "K562 Cells", "Nuclear Proteins", "Promoter Regions, Genetic", "Protein Binding", "RNA", "RNA-Binding Proteins", "RNA-Seq", "Transcription, Genetic", "Transcriptome", "YY1 Transcription Factor"]
Funding
R01 HG004659
NHGRI NIH HHS
(United States)
U54 HG007005
NHGRI NIH HHS
(United States)
K99 DK120952
NIDDK NIH HHS
(United States)
R01 GM052872
NIGMS NIH HHS
(United States)
RC1 CA145889
NCI NIH HHS
(United States)
R01 GM049369
NIGMS NIH HHS
(United States)
Linked Datasets (4)
Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-based Regulation of Transcription [HiC-Seq]
Homo sapiens8 data files
| File | Type | Size |
|---|---|---|
| Control_BLHiC_HepG2_rep1_R1.fq.gz | OTHER | 10.4 GB |
| Control_BLHiC_HepG2_rep1_R1.fq.gz | OTHER | 10.4 GB |
| Control_BLHiC_HepG2_rep2_R1.fq.gz | OTHER | 10.2 GB |
| Control_BLHiC_HepG2_rep2_R1.fq.gz | OTHER | 10.2 GB |
| RBM25.KD_BLHiC_HepG2_rep1_R1.fq.gz | OTHER | 12.0 GB |
| RBM25.KD_BLHiC_HepG2_rep1_R1.fq.gz | OTHER | 12.0 GB |
| RBM25.KD_BLHiC_HepG2_rep2_R1.fq.gz | OTHER | 9.6 GB |
| RBM25.KD_BLHiC_HepG2_rep2_R1.fq.gz | OTHER | 9.6 GB |
Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-based Regulation of Transcription
Homo sapiensPervasive Chromatin-RNA Binding Protein Interactions Enable RNA-based Regulation of Transcription [GRO-Seq]
Homo sapiens76 data files
| File | Type | Size |
|---|---|---|
| AGO1.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 338.5 MB |
| AGO1.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 338.5 MB |
| AGO1.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 398.8 MB |
| AGO1.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 398.8 MB |
| AGO2.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 316.8 MB |
| AGO2.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 316.8 MB |
| AGO2.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 367.4 MB |
| AGO2.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 367.4 MB |
| Control_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 321.8 MB |
| Control_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 321.8 MB |
| Control_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 254.2 MB |
| Control_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 254.2 MB |
| Control_GRO_rep1_HepG2_batch3.fastq.gz | OTHER | 761.9 MB |
| Control_GRO_rep1_HepG2_batch3.fastq.gz | OTHER | 761.9 MB |
| Control_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 426.4 MB |
| Control_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 426.4 MB |
| Control_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 269.1 MB |
| Control_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 269.1 MB |
| Control_GRO_rep2_HepG2_batch3.fastq.gz | OTHER | 763.2 MB |
| Control_GRO_rep2_HepG2_batch3.fastq.gz | OTHER | 763.2 MB |
| HNRNPH1.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 245.8 MB |
| HNRNPH1.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 260.2 MB |
| HNRNPH1.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 260.2 MB |
| HNRNPK.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 254.5 MB |
| HNRNPK.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 254.5 MB |
| HNRNPK.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 230.1 MB |
| HNRNPL.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 329.8 MB |
| HNRNPL.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 329.8 MB |
| HNRNPL.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 374.7 MB |
| HNRNPLL.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 257.3 MB |
| HNRNPLL.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 257.3 MB |
| HNRNPLL.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 285.0 MB |
| HNRNPLL.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 285.0 MB |
| PCBP2.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 254.4 MB |
| PCBP2.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 254.4 MB |
| PCBP2.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 268.5 MB |
| PCBP2.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 268.5 MB |
| PTBP1.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 245.6 MB |
| PTBP1.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 270.8 MB |
| PTBP1.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 270.8 MB |
| RBM22.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 264.3 MB |
| RBM22.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 264.3 MB |
| RBM22.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 288.9 MB |
| RBM22.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 288.9 MB |
| RBM25.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 225.0 MB |
| RBM25.KD_GRO_rep1_HepG2_batch3.fastq.gz | OTHER | 871.8 MB |
| RBM25.KD_GRO_rep1_HepG2_batch3.fastq.gz | OTHER | 871.8 MB |
| RBM25.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 256.0 MB |
| RBM25.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 256.0 MB |
| RBM25.KD_GRO_rep2_HepG2_batch3.fastq.gz | OTHER | 835.0 MB |
| RBM25.KD_GRO_rep2_HepG2_batch3.fastq.gz | OTHER | 835.0 MB |
| SRR7868792 | OTHER | 374.7 MB |
| SRR7868795 | OTHER | 321.8 MB |
| SRR7868801 | OTHER | 245.8 MB |
| SRR7868804 | OTHER | 230.1 MB |
| SRR7868809 | OTHER | 245.6 MB |
| SRR7868813 | OTHER | 225.0 MB |
| SRSF4.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 309.2 MB |
| SRSF4.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 309.2 MB |
| SRSF4.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 407.1 MB |
| SRSF4.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 407.1 MB |
| U2AF1.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 321.8 MB |
| U2AF1.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 411.6 MB |
| U2AF1.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 411.6 MB |
| U2AF2.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 314.2 MB |
| U2AF2.KD_GRO_rep1_HepG2_batch1.fastq.gz | OTHER | 314.2 MB |
| U2AF2.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 397.6 MB |
| U2AF2.KD_GRO_rep2_HepG2_batch1.fastq.gz | OTHER | 397.6 MB |
| XRCC5.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 274.4 MB |
| XRCC5.KD_GRO_rep1_HepG2_batch2.fastq.gz | OTHER | 274.4 MB |
| XRCC5.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 270.5 MB |
| XRCC5.KD_GRO_rep2_HepG2_batch2.fastq.gz | OTHER | 270.5 MB |
| YY1.KD_GRO_rep1_HepG2_batch3.fastq.gz | OTHER | 881.2 MB |
| YY1.KD_GRO_rep1_HepG2_batch3.fastq.gz | OTHER | 881.2 MB |
| YY1.KD_GRO_rep2_HepG2_batch3.fastq.gz | OTHER | 687.0 MB |
| YY1.KD_GRO_rep2_HepG2_batch3.fastq.gz | OTHER | 687.0 MB |
Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-based Regulation of Transcription [ChIP-Seq]
Homo sapiens408 data files
| File | Type | Size |
|---|---|---|
| AGO1_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 847.7 MB |
| AGO1_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 847.7 MB |
| AGO1_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 570.4 MB |
| AGO1_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 570.4 MB |
| AGO1_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 1.0 GB |
| AGO1_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 1.0 GB |
| AGO1_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 532.4 MB |
| AGO1_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 532.4 MB |
| AGO2_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 463.9 MB |
| AGO2_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 463.9 MB |
| AGO2_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 513.6 MB |
| AGO2_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 513.6 MB |
| CCAR2_ChIP_rep1_HepG2_batch11.fastq.gz | ChIP-Seq | 1.1 GB |
| CCAR2_ChIP_rep1_HepG2_batch11.fastq.gz | ChIP-Seq | 1.1 GB |
| CCAR2_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 344.2 MB |
| CCAR2_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 344.2 MB |
| CCAR2_ChIP_rep2_HepG2_batch11.fastq.gz | ChIP-Seq | 1.1 GB |
| CCAR2_ChIP_rep2_HepG2_batch11.fastq.gz | ChIP-Seq | 1.1 GB |
| CCAR2_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 338.5 MB |
| CCAR2_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 338.5 MB |
| FIP1L1_ChIP_rep1_HepG2_batch8.fastq.gz | ChIP-Seq | 385.4 MB |
| FIP1L1_ChIP_rep1_HepG2_batch8.fastq.gz | ChIP-Seq | 385.4 MB |
| FIP1L1_ChIP_rep1_K562_batch6.fastq.gz | ChIP-Seq | 286.4 MB |
| FIP1L1_ChIP_rep2_HepG2_batch8.fastq.gz | ChIP-Seq | 376.7 MB |
| FIP1L1_ChIP_rep2_HepG2_batch8.fastq.gz | ChIP-Seq | 376.7 MB |
| FIP1L1_ChIP_rep2_K562_batch6.fastq.gz | ChIP-Seq | 385.2 MB |
| FUS_ChIP_rep1_HepG2_batch12.fastq.gz | ChIP-Seq | 465.6 MB |
| FUS_ChIP_rep1_HepG2_batch12.fastq.gz | ChIP-Seq | 465.6 MB |
| FUS_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 243.6 MB |
| FUS_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 243.6 MB |
| FUS_ChIP_rep2_HepG2_batch12.fastq.gz | ChIP-Seq | 755.0 MB |
| FUS_ChIP_rep2_HepG2_batch12.fastq.gz | ChIP-Seq | 755.0 MB |
| FUS_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 251.5 MB |
| FUS_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 251.5 MB |
| GTF2F1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 348.6 MB |
| GTF2F1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 348.6 MB |
| GTF2F1_ChIP_rep1_K562_batch3.fastq.gz | ChIP-Seq | 773.7 MB |
| GTF2F1_ChIP_rep1_K562_batch3.fastq.gz | ChIP-Seq | 773.7 MB |
| GTF2F1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 394.5 MB |
| GTF2F1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 394.5 MB |
| GTF2F1_ChIP_rep2_K562_batch3.fastq.gz | ChIP-Seq | 510.6 MB |
| GTF2F1_ChIP_rep2_K562_batch3.fastq.gz | ChIP-Seq | 510.6 MB |
| HNRNPC_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 473.9 MB |
| HNRNPC_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 473.9 MB |
| HNRNPC_ChIP_rep1_K562_batch4.fastq.gz | ChIP-Seq | 291.5 MB |
| HNRNPC_ChIP_rep1_K562_batch4.fastq.gz | ChIP-Seq | 291.5 MB |
| HNRNPC_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 488.0 MB |
| HNRNPC_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 488.0 MB |
| HNRNPC_ChIP_rep2_K562_batch4.fastq.gz | ChIP-Seq | 305.0 MB |
| HNRNPC_ChIP_rep2_K562_batch4.fastq.gz | ChIP-Seq | 305.0 MB |
| HNRNPH1_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 592.6 MB |
| HNRNPH1_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 592.6 MB |
| HNRNPH1_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 426.4 MB |
| HNRNPH1_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 426.4 MB |
| HNRNPH1_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 551.4 MB |
| HNRNPH1_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 551.4 MB |
| HNRNPH1_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 458.5 MB |
| HNRNPH1_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 458.5 MB |
| HNRNPK_ChIP_rep1_HepG2_batch6.fastq.gz | ChIP-Seq | 492.7 MB |
| HNRNPK_ChIP_rep1_HepG2_batch6.fastq.gz | ChIP-Seq | 492.7 MB |
| HNRNPK_ChIP_rep1_K562_batch1.fastq.gz | ChIP-Seq | 887.9 MB |
| HNRNPK_ChIP_rep1_K562_batch1.fastq.gz | ChIP-Seq | 887.9 MB |
| HNRNPK_ChIP_rep2_HepG2_batch6.fastq.gz | ChIP-Seq | 673.9 MB |
| HNRNPK_ChIP_rep2_HepG2_batch6.fastq.gz | ChIP-Seq | 673.9 MB |
| HNRNPK_ChIP_rep2_K562_batch1.fastq.gz | ChIP-Seq | 965.2 MB |
| HNRNPK_ChIP_rep2_K562_batch1.fastq.gz | ChIP-Seq | 965.2 MB |
| HNRNPL_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 353.1 MB |
| HNRNPL_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 353.1 MB |
| HNRNPL_ChIP_rep1_K562_batch9.fastq.gz | ChIP-Seq | 359.6 MB |
| HNRNPL_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 323.6 MB |
| HNRNPL_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 323.6 MB |
| HNRNPL_ChIP_rep2_K562_batch9.fastq.gz | ChIP-Seq | 392.2 MB |
| HNRNPL_ChIP_rep2_K562_batch9.fastq.gz | ChIP-Seq | 392.2 MB |
| HNRNPLL_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 731.4 MB |
| HNRNPLL_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 731.4 MB |
| HNRNPLL_ChIP_rep1_K562_batch9.fastq.gz | ChIP-Seq | 1003.5 MB |
| HNRNPLL_ChIP_rep1_K562_batch9.fastq.gz | ChIP-Seq | 1003.5 MB |
| HNRNPLL_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 1.0 GB |
| HNRNPLL_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 1.0 GB |
| HNRNPLL_ChIP_rep2_K562_batch9.fastq.gz | ChIP-Seq | 1.1 GB |
| HNRNPLL_ChIP_rep2_K562_batch9.fastq.gz | ChIP-Seq | 1.1 GB |
| HNRNPUL1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 514.0 MB |
| HNRNPUL1_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 701.3 MB |
| HNRNPUL1_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 701.3 MB |
| HNRNPUL1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 577.4 MB |
| HNRNPUL1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 577.4 MB |
| HNRNPUL1_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 601.6 MB |
| HNRNPUL1_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 601.6 MB |
| input_Control_rep1_HepG2_batch10.fastq.gz | ChIP-Seq | 900.5 MB |
| input_Control_rep1_HepG2_batch10.fastq.gz | ChIP-Seq | 900.5 MB |
| input_Control_rep1_HepG2_batch11.fastq.gz | ChIP-Seq | 917.1 MB |
| input_Control_rep1_HepG2_batch11.fastq.gz | ChIP-Seq | 917.1 MB |
| input_Control_rep1_HepG2_batch12.fastq.gz | ChIP-Seq | 898.9 MB |
| input_Control_rep1_HepG2_batch12.fastq.gz | ChIP-Seq | 898.9 MB |
| input_Control_rep1_HepG2_batch13.fastq.gz | ChIP-Seq | 2.3 GB |
| input_Control_rep1_HepG2_batch13.fastq.gz | ChIP-Seq | 2.3 GB |
| input_Control_rep1_HepG2_batch14.fastq.gz | ChIP-Seq | 556.8 MB |
| input_Control_rep1_HepG2_batch14.fastq.gz | ChIP-Seq | 556.8 MB |
| input_Control_rep1_HepG2_batch15.fastq.gz | ChIP-Seq | 594.9 MB |
| input_Control_rep1_HepG2_batch15.fastq.gz | ChIP-Seq | 594.9 MB |
| input_Control_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 664.2 MB |
| input_Control_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 664.2 MB |
| input_Control_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 575.4 MB |
| input_Control_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 575.4 MB |
| input_Control_rep1_HepG2_batch3.fastq.gz | ChIP-Seq | 1.3 GB |
| input_Control_rep1_HepG2_batch3.fastq.gz | ChIP-Seq | 1.3 GB |
| input_Control_rep1_HepG2_batch5.fastq.gz | ChIP-Seq | 980.9 MB |
| input_Control_rep1_HepG2_batch5.fastq.gz | ChIP-Seq | 980.9 MB |
| input_Control_rep1_HepG2_batch6.fastq.gz | ChIP-Seq | 717.9 MB |
| input_Control_rep1_HepG2_batch6.fastq.gz | ChIP-Seq | 717.9 MB |
| input_Control_rep1_HepG2_batch7.fastq.gz | ChIP-Seq | 652.0 MB |
| input_Control_rep1_HepG2_batch7.fastq.gz | ChIP-Seq | 652.0 MB |
| input_Control_rep1_HepG2_batch8.fastq.gz | ChIP-Seq | 964.1 MB |
| input_Control_rep1_HepG2_batch8.fastq.gz | ChIP-Seq | 964.1 MB |
| input_Control_rep1_K562_batch10.fastq.gz | ChIP-Seq | 693.2 MB |
| input_Control_rep1_K562_batch10.fastq.gz | ChIP-Seq | 693.2 MB |
| input_Control_rep1_K562_batch11.fastq.gz | ChIP-Seq | 522.8 MB |
| input_Control_rep1_K562_batch11.fastq.gz | ChIP-Seq | 522.8 MB |
| input_Control_rep1_K562_batch1.fastq.gz | ChIP-Seq | 672.2 MB |
| input_Control_rep1_K562_batch1.fastq.gz | ChIP-Seq | 672.2 MB |
| input_Control_rep1_K562_batch2.fastq.gz | ChIP-Seq | 633.8 MB |
| input_Control_rep1_K562_batch2.fastq.gz | ChIP-Seq | 633.8 MB |
| input_Control_rep1_K562_batch3.fastq.gz | ChIP-Seq | 591.3 MB |
| input_Control_rep1_K562_batch3.fastq.gz | ChIP-Seq | 591.3 MB |
| input_Control_rep1_K562_batch4.fastq.gz | ChIP-Seq | 549.3 MB |
| input_Control_rep1_K562_batch4.fastq.gz | ChIP-Seq | 549.3 MB |
| input_Control_rep1_K562_batch5.fastq.gz | ChIP-Seq | 751.0 MB |
| input_Control_rep1_K562_batch5.fastq.gz | ChIP-Seq | 751.0 MB |
| input_Control_rep1_K562_batch6.fastq.gz | ChIP-Seq | 706.7 MB |
| input_Control_rep1_K562_batch6.fastq.gz | ChIP-Seq | 706.7 MB |
| input_Control_rep1_K562_batch7.fastq.gz | ChIP-Seq | 1.8 GB |
| input_Control_rep1_K562_batch7.fastq.gz | ChIP-Seq | 1.8 GB |
| input_Control_rep1_K562_batch8.fastq.gz | ChIP-Seq | 502.0 MB |
| input_Control_rep1_K562_batch8.fastq.gz | ChIP-Seq | 502.0 MB |
| input_Control_rep1_K562_batch9.fastq.gz | ChIP-Seq | 640.4 MB |
| input_Control_rep1_K562_batch9.fastq.gz | ChIP-Seq | 640.4 MB |
| input_Control_rep2_HepG2_batch10.fastq.gz | ChIP-Seq | 874.8 MB |
| input_Control_rep2_HepG2_batch10.fastq.gz | ChIP-Seq | 874.8 MB |
| input_Control_rep2_HepG2_batch11.fastq.gz | ChIP-Seq | 868.2 MB |
| input_Control_rep2_HepG2_batch11.fastq.gz | ChIP-Seq | 868.2 MB |
| input_Control_rep2_HepG2_batch12.fastq.gz | ChIP-Seq | 1.1 GB |
| input_Control_rep2_HepG2_batch12.fastq.gz | ChIP-Seq | 1.1 GB |
| input_Control_rep2_HepG2_batch13.fastq.gz | ChIP-Seq | 2.1 GB |
| input_Control_rep2_HepG2_batch13.fastq.gz | ChIP-Seq | 2.1 GB |
| input_Control_rep2_HepG2_batch14.fastq.gz | ChIP-Seq | 721.4 MB |
| input_Control_rep2_HepG2_batch14.fastq.gz | ChIP-Seq | 721.4 MB |
| input_Control_rep2_HepG2_batch15.fastq.gz | ChIP-Seq | 691.9 MB |
| input_Control_rep2_HepG2_batch15.fastq.gz | ChIP-Seq | 691.9 MB |
| input_Control_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 608.4 MB |
| input_Control_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 608.4 MB |
| input_Control_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 635.2 MB |
| input_Control_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 635.2 MB |
| input_Control_rep2_HepG2_batch3.fastq.gz | ChIP-Seq | 1.3 GB |
| input_Control_rep2_HepG2_batch3.fastq.gz | ChIP-Seq | 1.3 GB |
| input_Control_rep2_HepG2_batch5.fastq.gz | ChIP-Seq | 1.1 GB |
| input_Control_rep2_HepG2_batch5.fastq.gz | ChIP-Seq | 1.1 GB |
| input_Control_rep2_HepG2_batch6.fastq.gz | ChIP-Seq | 696.9 MB |
| input_Control_rep2_HepG2_batch6.fastq.gz | ChIP-Seq | 696.9 MB |
| input_Control_rep2_HepG2_batch7.fastq.gz | ChIP-Seq | 837.8 MB |
| input_Control_rep2_HepG2_batch7.fastq.gz | ChIP-Seq | 837.8 MB |
| input_Control_rep2_HepG2_batch8.fastq.gz | ChIP-Seq | 739.5 MB |
| input_Control_rep2_HepG2_batch8.fastq.gz | ChIP-Seq | 739.5 MB |
| input_Control_rep2_K562_batch10.fastq.gz | ChIP-Seq | 561.3 MB |
| input_Control_rep2_K562_batch10.fastq.gz | ChIP-Seq | 561.3 MB |
| input_Control_rep2_K562_batch11.fastq.gz | ChIP-Seq | 510.6 MB |
| input_Control_rep2_K562_batch11.fastq.gz | ChIP-Seq | 510.6 MB |
| input_Control_rep2_K562_batch1.fastq.gz | ChIP-Seq | 614.2 MB |
| input_Control_rep2_K562_batch2.fastq.gz | ChIP-Seq | 636.8 MB |
| input_Control_rep2_K562_batch2.fastq.gz | ChIP-Seq | 636.8 MB |
| input_Control_rep2_K562_batch3.fastq.gz | ChIP-Seq | 637.0 MB |
| input_Control_rep2_K562_batch3.fastq.gz | ChIP-Seq | 637.0 MB |
| input_Control_rep2_K562_batch4.fastq.gz | ChIP-Seq | 542.8 MB |
| input_Control_rep2_K562_batch4.fastq.gz | ChIP-Seq | 542.8 MB |
| input_Control_rep2_K562_batch5.fastq.gz | ChIP-Seq | 852.2 MB |
| input_Control_rep2_K562_batch5.fastq.gz | ChIP-Seq | 852.2 MB |
| input_Control_rep2_K562_batch6.fastq.gz | ChIP-Seq | 779.8 MB |
| input_Control_rep2_K562_batch6.fastq.gz | ChIP-Seq | 779.8 MB |
| input_Control_rep2_K562_batch7.fastq.gz | ChIP-Seq | 2.1 GB |
| input_Control_rep2_K562_batch7.fastq.gz | ChIP-Seq | 2.1 GB |
| input_Control_rep2_K562_batch8.fastq.gz | ChIP-Seq | 731.1 MB |
| input_Control_rep2_K562_batch8.fastq.gz | ChIP-Seq | 731.1 MB |
| input_Control_rep2_K562_batch9.fastq.gz | ChIP-Seq | 690.0 MB |
| input_Control_rep2_K562_batch9.fastq.gz | ChIP-Seq | 690.0 MB |
| input-NC4rbm25chip-rep1_R1.fq.gz | ChIP-Seq | 2.1 GB |
| input-NC4rbm25chip-rep1_R1.fq.gz | ChIP-Seq | 2.1 GB |
| input-NC4rbm25chip-rep2_R1.fq.gz | ChIP-Seq | 2.0 GB |
| input-NC4rbm25chip-rep2_R1.fq.gz | ChIP-Seq | 2.0 GB |
| input-NC4yy1chip-rep1_R1.fq.gz | ChIP-Seq | 2.2 GB |
| input-NC4yy1chip-rep1_R1.fq.gz | ChIP-Seq | 2.2 GB |
| input-NC4yy1chip-rep2_R1.fq.gz | ChIP-Seq | 1.8 GB |
| input-NC4yy1chip-rep2_R1.fq.gz | ChIP-Seq | 1.8 GB |
| input-rbm25kd4yy1chip-rep1_R1.fq.gz | ChIP-Seq | 1.7 GB |
| input-rbm25kd4yy1chip-rep1_R1.fq.gz | ChIP-Seq | 1.7 GB |
| input-rbm25kd4yy1chip-rep2_R1.fq.gz | ChIP-Seq | 1.9 GB |
| input-rbm25kd4yy1chip-rep2_R1.fq.gz | ChIP-Seq | 1.9 GB |
| input-yy1kd4rbm25chip-rep1_R1.fq.gz | ChIP-Seq | 2.4 GB |
| input-yy1kd4rbm25chip-rep1_R1.fq.gz | ChIP-Seq | 2.4 GB |
| input-yy1kd4rbm25chip-rep2_R1.fq.gz | ChIP-Seq | 2.0 GB |
| input-yy1kd4rbm25chip-rep2_R1.fq.gz | ChIP-Seq | 2.0 GB |
| NONO_ChIP_rep1_HepG2_batch14.fastq.gz | ChIP-Seq | 340.8 MB |
| NONO_ChIP_rep1_HepG2_batch14.fastq.gz | ChIP-Seq | 340.8 MB |
| NONO_ChIP_rep1_K562_batch8.fastq.gz | ChIP-Seq | 340.0 MB |
| NONO_ChIP_rep1_K562_batch8.fastq.gz | ChIP-Seq | 340.0 MB |
| NONO_ChIP_rep2_HepG2_batch14.fastq.gz | ChIP-Seq | 317.2 MB |
| NONO_ChIP_rep2_HepG2_batch14.fastq.gz | ChIP-Seq | 317.2 MB |
| NONO_ChIP_rep2_K562_batch8.fastq.gz | ChIP-Seq | 290.8 MB |
| PCBP1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 381.0 MB |
| PCBP1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 381.0 MB |
| PCBP1_ChIP_rep1_K562_batch2.fastq.gz | ChIP-Seq | 750.1 MB |
| PCBP1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 346.6 MB |
| PCBP1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 346.6 MB |
| PCBP1_ChIP_rep2_K562_batch2.fastq.gz | ChIP-Seq | 684.6 MB |
| PCBP2_ChIP_rep1_HepG2_batch7.fastq.gz | ChIP-Seq | 774.8 MB |
| PCBP2_ChIP_rep1_HepG2_batch7.fastq.gz | ChIP-Seq | 774.8 MB |
| PCBP2_ChIP_rep1_K562_batch2.fastq.gz | ChIP-Seq | 773.7 MB |
| PCBP2_ChIP_rep1_K562_batch2.fastq.gz | ChIP-Seq | 773.7 MB |
| PCBP2_ChIP_rep2_HepG2_batch7.fastq.gz | ChIP-Seq | 839.7 MB |
| PCBP2_ChIP_rep2_HepG2_batch7.fastq.gz | ChIP-Seq | 839.7 MB |
| PCBP2_ChIP_rep2_K562_batch2.fastq.gz | ChIP-Seq | 354.7 MB |
| PCBP2_ChIP_rep2_K562_batch2.fastq.gz | ChIP-Seq | 354.7 MB |
| POLR2G_ChIP_rep1_HepG2_batch7.fastq.gz | ChIP-Seq | 450.4 MB |
| POLR2G_ChIP_rep1_HepG2_batch7.fastq.gz | ChIP-Seq | 450.4 MB |
| POLR2G_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 455.2 MB |
| POLR2G_ChIP_rep2_HepG2_batch7.fastq.gz | ChIP-Seq | 549.9 MB |
| POLR2G_ChIP_rep2_HepG2_batch7.fastq.gz | ChIP-Seq | 549.9 MB |
| POLR2G_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 419.6 MB |
| POLR2G_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 419.6 MB |
| PRPF4_ChIP_rep1_HepG2_batch7.fastq.gz | ChIP-Seq | 611.0 MB |
| PRPF4_ChIP_rep1_HepG2_batch7.fastq.gz | ChIP-Seq | 611.0 MB |
| PRPF4_ChIP_rep1_K562_batch2.fastq.gz | ChIP-Seq | 1.6 GB |
| PRPF4_ChIP_rep1_K562_batch2.fastq.gz | ChIP-Seq | 1.6 GB |
| PRPF4_ChIP_rep2_HepG2_batch7.fastq.gz | ChIP-Seq | 1.0 GB |
| PRPF4_ChIP_rep2_HepG2_batch7.fastq.gz | ChIP-Seq | 1.0 GB |
| PRPF4_ChIP_rep2_K562_batch2.fastq.gz | ChIP-Seq | 1.5 GB |
| PRPF4_ChIP_rep2_K562_batch2.fastq.gz | ChIP-Seq | 1.5 GB |
| PTBP1_ChIP_rep1_HepG2_batch3.fastq.gz | ChIP-Seq | 1022.8 MB |
| PTBP1_ChIP_rep1_HepG2_batch3.fastq.gz | ChIP-Seq | 1022.8 MB |
| PTBP1_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 256.4 MB |
| PTBP1_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 256.4 MB |
| PTBP1_ChIP_rep2_HepG2_batch3.fastq.gz | ChIP-Seq | 801.5 MB |
| PTBP1_ChIP_rep2_HepG2_batch3.fastq.gz | ChIP-Seq | 801.5 MB |
| PTBP1_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 254.3 MB |
| PTBP1_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 254.3 MB |
| RBFOX2_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 293.1 MB |
| RBFOX2_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 293.1 MB |
| RBFOX2_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 460.8 MB |
| RBFOX2_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 460.8 MB |
| RBFOX2_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 271.2 MB |
| RBFOX2_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 271.2 MB |
| RBFOX2_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 544.2 MB |
| RBFOX2_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 544.2 MB |
| RBM22_ChIP_rep1_HepG2_batch13.fastq.gz | ChIP-Seq | 740.3 MB |
| RBM22_ChIP_rep1_HepG2_batch13.fastq.gz | ChIP-Seq | 740.3 MB |
| RBM22_ChIP_rep1_K562_batch5.fastq.gz | ChIP-Seq | 537.6 MB |
| RBM22_ChIP_rep1_K562_batch5.fastq.gz | ChIP-Seq | 537.6 MB |
| RBM22_ChIP_rep2_HepG2_batch13.fastq.gz | ChIP-Seq | 820.9 MB |
| RBM22_ChIP_rep2_HepG2_batch13.fastq.gz | ChIP-Seq | 820.9 MB |
| RBM22_ChIP_rep2_K562_batch5.fastq.gz | ChIP-Seq | 533.0 MB |
| RBM22_ChIP_rep2_K562_batch5.fastq.gz | ChIP-Seq | 533.0 MB |
| RBM25chip-NC.rep1_R1.fq.gz | ChIP-Seq | 1.7 GB |
| RBM25chip-NC.rep1_R1.fq.gz | ChIP-Seq | 1.7 GB |
| RBM25chip-NC.rep2_R1.fq.gz | ChIP-Seq | 1.9 GB |
| RBM25chip-NC.rep2_R1.fq.gz | ChIP-Seq | 1.9 GB |
| RBM25_ChIP_rep1_HepG2_batch14.fastq.gz | ChIP-Seq | 436.2 MB |
| RBM25_ChIP_rep1_HepG2_batch14.fastq.gz | ChIP-Seq | 436.2 MB |
| RBM25_ChIP_rep1_K562_batch5.fastq.gz | ChIP-Seq | 431.0 MB |
| RBM25_ChIP_rep1_K562_batch5.fastq.gz | ChIP-Seq | 431.0 MB |
| RBM25_ChIP_rep2_HepG2_batch14.fastq.gz | ChIP-Seq | 575.0 MB |
| RBM25_ChIP_rep2_HepG2_batch14.fastq.gz | ChIP-Seq | 575.0 MB |
| RBM25_ChIP_rep2_K562_batch5.fastq.gz | ChIP-Seq | 433.4 MB |
| RBM25_ChIP_rep2_K562_batch5.fastq.gz | ChIP-Seq | 433.4 MB |
| RBM25chip-yy1kd.rep1_R1.fq.gz | ChIP-Seq | 1.3 GB |
| RBM25chip-yy1kd.rep1_R1.fq.gz | ChIP-Seq | 1.3 GB |
| RBM25chip-yy1kd.rep2_R1.fq.gz | ChIP-Seq | 1.9 GB |
| RBM25chip-yy1kd.rep2_R1.fq.gz | ChIP-Seq | 1.9 GB |
| RBM39_ChIP_rep1_HepG2_batch14.fastq.gz | ChIP-Seq | 1.1 GB |
| RBM39_ChIP_rep1_HepG2_batch14.fastq.gz | ChIP-Seq | 1.1 GB |
| RBM39_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 467.0 MB |
| RBM39_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 467.0 MB |
| RBM39_ChIP_rep2_HepG2_batch14.fastq.gz | ChIP-Seq | 1.9 GB |
| RBM39_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 441.6 MB |
| RBM39_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 441.6 MB |
| SAFB2_ChIP_rep1_HepG2_batch10.fastq.gz | ChIP-Seq | 430.3 MB |
| SAFB2_ChIP_rep1_HepG2_batch10.fastq.gz | ChIP-Seq | 430.3 MB |
| SAFB2_ChIP_rep1_K562_batch5.fastq.gz | ChIP-Seq | 230.6 MB |
| SAFB2_ChIP_rep1_K562_batch5.fastq.gz | ChIP-Seq | 230.6 MB |
| SAFB2_ChIP_rep2_HepG2_batch10.fastq.gz | ChIP-Seq | 460.8 MB |
| SAFB2_ChIP_rep2_HepG2_batch10.fastq.gz | ChIP-Seq | 460.8 MB |
| SAFB2_ChIP_rep2_K562_batch5.fastq.gz | ChIP-Seq | 306.9 MB |
| SAFB2_ChIP_rep2_K562_batch5.fastq.gz | ChIP-Seq | 306.9 MB |
| SAFB_ChIP_rep1_K562_batch3.fastq.gz | ChIP-Seq | 339.1 MB |
| SAFB_ChIP_rep1_K562_batch3.fastq.gz | ChIP-Seq | 339.1 MB |
| SAFB_ChIP_rep2_K562_batch3.fastq.gz | ChIP-Seq | 303.9 MB |
| SAFB_ChIP_rep2_K562_batch3.fastq.gz | ChIP-Seq | 303.9 MB |
| SFPQ_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 358.3 MB |
| SFPQ_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 358.3 MB |
| SFPQ_ChIP_rep1_K562_batch9.fastq.gz | ChIP-Seq | 489.3 MB |
| SFPQ_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 366.7 MB |
| SFPQ_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 366.7 MB |
| SFPQ_ChIP_rep2_K562_batch9.fastq.gz | ChIP-Seq | 417.6 MB |
| SFPQ_ChIP_rep2_K562_batch9.fastq.gz | ChIP-Seq | 417.6 MB |
| SNRNP70_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 443.9 MB |
| SNRNP70_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 443.9 MB |
| SNRNP70_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 388.8 MB |
| SNRNP70_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 388.8 MB |
| SNRNP70_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 526.4 MB |
| SNRNP70_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 526.4 MB |
| SNRNP70_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 403.2 MB |
| SNRNP70_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 403.2 MB |
| SRR7868864 | ChIP-Seq | 514.0 MB |
| SRR7868889 | ChIP-Seq | 1.9 GB |
| SRR7868945 | ChIP-Seq | 241.8 MB |
| SRR7868946 | ChIP-Seq | 458.6 MB |
| SRR7868956 | ChIP-Seq | 359.6 MB |
| SRR7868964 | ChIP-Seq | 750.1 MB |
| SRR7868965 | ChIP-Seq | 684.6 MB |
| SRR7868976 | ChIP-Seq | 286.4 MB |
| SRR7868977 | ChIP-Seq | 385.2 MB |
| SRR7868993 | ChIP-Seq | 290.8 MB |
| SRR7868996 | ChIP-Seq | 455.2 MB |
| SRR7868998 | ChIP-Seq | 489.3 MB |
| SRR7869007 | ChIP-Seq | 614.2 MB |
| SRSF1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 457.4 MB |
| SRSF1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 457.4 MB |
| SRSF1_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 417.5 MB |
| SRSF1_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 417.5 MB |
| SRSF1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 466.0 MB |
| SRSF1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 466.0 MB |
| SRSF1_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 452.5 MB |
| SRSF1_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 452.5 MB |
| SRSF3_ChIP_rep1_HepG2_batch3.fastq.gz | ChIP-Seq | 605.2 MB |
| SRSF3_ChIP_rep1_HepG2_batch3.fastq.gz | ChIP-Seq | 605.2 MB |
| SRSF3_ChIP_rep1_K562_batch4.fastq.gz | ChIP-Seq | 338.6 MB |
| SRSF3_ChIP_rep1_K562_batch4.fastq.gz | ChIP-Seq | 338.6 MB |
| SRSF3_ChIP_rep2_HepG2_batch3.fastq.gz | ChIP-Seq | 630.6 MB |
| SRSF3_ChIP_rep2_HepG2_batch3.fastq.gz | ChIP-Seq | 630.6 MB |
| SRSF3_ChIP_rep2_K562_batch4.fastq.gz | ChIP-Seq | 496.2 MB |
| SRSF3_ChIP_rep2_K562_batch4.fastq.gz | ChIP-Seq | 496.2 MB |
| SRSF4_ChIP_rep1_HepG2_batch5.fastq.gz | ChIP-Seq | 868.7 MB |
| SRSF4_ChIP_rep1_HepG2_batch5.fastq.gz | ChIP-Seq | 868.7 MB |
| SRSF4_ChIP_rep1_K562_batch6.fastq.gz | ChIP-Seq | 360.1 MB |
| SRSF4_ChIP_rep1_K562_batch6.fastq.gz | ChIP-Seq | 360.1 MB |
| SRSF4_ChIP_rep2_HepG2_batch5.fastq.gz | ChIP-Seq | 1005.1 MB |
| SRSF4_ChIP_rep2_HepG2_batch5.fastq.gz | ChIP-Seq | 1005.1 MB |
| SRSF4_ChIP_rep2_K562_batch6.fastq.gz | ChIP-Seq | 398.1 MB |
| SRSF4_ChIP_rep2_K562_batch6.fastq.gz | ChIP-Seq | 398.1 MB |
| SRSF7_ChIP_rep1_HepG2_batch5.fastq.gz | ChIP-Seq | 480.6 MB |
| SRSF7_ChIP_rep1_HepG2_batch5.fastq.gz | ChIP-Seq | 480.6 MB |
| SRSF7_ChIP_rep1_K562_batch4.fastq.gz | ChIP-Seq | 323.7 MB |
| SRSF7_ChIP_rep1_K562_batch4.fastq.gz | ChIP-Seq | 323.7 MB |
| SRSF7_ChIP_rep2_HepG2_batch5.fastq.gz | ChIP-Seq | 528.9 MB |
| SRSF7_ChIP_rep2_HepG2_batch5.fastq.gz | ChIP-Seq | 528.9 MB |
| SRSF7_ChIP_rep2_K562_batch4.fastq.gz | ChIP-Seq | 280.9 MB |
| SRSF7_ChIP_rep2_K562_batch4.fastq.gz | ChIP-Seq | 280.9 MB |
| SRSF9_ChIP_rep1_HepG2_batch5.fastq.gz | ChIP-Seq | 842.9 MB |
| SRSF9_ChIP_rep1_HepG2_batch5.fastq.gz | ChIP-Seq | 842.9 MB |
| SRSF9_ChIP_rep1_K562_batch4.fastq.gz | ChIP-Seq | 271.1 MB |
| SRSF9_ChIP_rep1_K562_batch4.fastq.gz | ChIP-Seq | 271.1 MB |
| SRSF9_ChIP_rep2_HepG2_batch5.fastq.gz | ChIP-Seq | 974.6 MB |
| SRSF9_ChIP_rep2_HepG2_batch5.fastq.gz | ChIP-Seq | 974.6 MB |
| SRSF9_ChIP_rep2_K562_batch4.fastq.gz | ChIP-Seq | 241.8 MB |
| TAF15_ChIP_rep1_HepG2_batch12.fastq.gz | ChIP-Seq | 737.8 MB |
| TAF15_ChIP_rep1_HepG2_batch12.fastq.gz | ChIP-Seq | 737.8 MB |
| TAF15_ChIP_rep1_K562_batch9.fastq.gz | ChIP-Seq | 334.8 MB |
| TAF15_ChIP_rep1_K562_batch9.fastq.gz | ChIP-Seq | 334.8 MB |
| TAF15_ChIP_rep2_HepG2_batch12.fastq.gz | ChIP-Seq | 1.3 GB |
| TAF15_ChIP_rep2_HepG2_batch12.fastq.gz | ChIP-Seq | 1.3 GB |
| TAF15_ChIP_rep2_K562_batch9.fastq.gz | ChIP-Seq | 419.1 MB |
| TAF15_ChIP_rep2_K562_batch9.fastq.gz | ChIP-Seq | 419.1 MB |
| TARDBP_ChIP_rep1_HepG2_batch15.fastq.gz | ChIP-Seq | 716.2 MB |
| TARDBP_ChIP_rep1_HepG2_batch15.fastq.gz | ChIP-Seq | 716.2 MB |
| TARDBP_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 569.9 MB |
| TARDBP_ChIP_rep1_K562_batch10.fastq.gz | ChIP-Seq | 569.9 MB |
| TARDBP_ChIP_rep2_HepG2_batch15.fastq.gz | ChIP-Seq | 672.2 MB |
| TARDBP_ChIP_rep2_HepG2_batch15.fastq.gz | ChIP-Seq | 672.2 MB |
| TARDBP_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 594.6 MB |
| TARDBP_ChIP_rep2_K562_batch10.fastq.gz | ChIP-Seq | 594.6 MB |
| U2AF1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 480.9 MB |
| U2AF1_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 480.9 MB |
| U2AF1_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 458.6 MB |
| U2AF1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 389.7 MB |
| U2AF1_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 389.7 MB |
| U2AF1_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 500.3 MB |
| U2AF1_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 500.3 MB |
| U2AF2_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 406.8 MB |
| U2AF2_ChIP_rep1_HepG2_batch17.fastq.gz | ChIP-Seq | 406.8 MB |
| U2AF2_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 305.3 MB |
| U2AF2_ChIP_rep1_K562_batch11.fastq.gz | ChIP-Seq | 305.3 MB |
| U2AF2_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 447.9 MB |
| U2AF2_ChIP_rep2_HepG2_batch17.fastq.gz | ChIP-Seq | 447.9 MB |
| U2AF2_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 351.0 MB |
| U2AF2_ChIP_rep2_K562_batch11.fastq.gz | ChIP-Seq | 351.0 MB |
| XRCC5_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 496.2 MB |
| XRCC5_ChIP_rep1_HepG2_batch16.fastq.gz | ChIP-Seq | 496.2 MB |
| XRCC5_ChIP_rep1_K562_batch7.fastq.gz | ChIP-Seq | 805.3 MB |
| XRCC5_ChIP_rep1_K562_batch7.fastq.gz | ChIP-Seq | 805.3 MB |
| XRCC5_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 573.1 MB |
| XRCC5_ChIP_rep2_HepG2_batch16.fastq.gz | ChIP-Seq | 573.1 MB |
| XRCC5_ChIP_rep2_K562_batch7.fastq.gz | ChIP-Seq | 668.0 MB |
| XRCC5_ChIP_rep2_K562_batch7.fastq.gz | ChIP-Seq | 668.0 MB |
| YY1chip-NC.rep1_R1.fq.gz | ChIP-Seq | 885.2 MB |
| YY1chip-NC.rep1_R1.fq.gz | ChIP-Seq | 885.2 MB |
| YY1chip-NC.rep2_R1.fq.gz | ChIP-Seq | 1.1 GB |
| YY1chip-NC.rep2_R1.fq.gz | ChIP-Seq | 1.1 GB |
| YY1chip-rbm25kd.rep1_R1.fq.gz | ChIP-Seq | 823.8 MB |
| YY1chip-rbm25kd.rep1_R1.fq.gz | ChIP-Seq | 823.8 MB |
| YY1chip-rbm25kd.rep2_R1.fq.gz | ChIP-Seq | 1.4 GB |
| YY1chip-rbm25kd.rep2_R1.fq.gz | ChIP-Seq | 1.4 GB |
Analysis Pipelines (4)
GSE120023 Hi-C Data Processing
5 steps
GSE120105 Data Processing
5 steps
geo_data_processing
GSE120105
GSE120110 Hi-C Data Processing
5 steps