Discovery and functional interrogation of SARS-CoV-2 protein-RNA interactions.
Joy S Xiang,
Jasmine R Mueller,
En-Ching Luo,
Brian A Yee,
Danielle Schafer,
Jonathan C Schmok,
Frederick E Tan,
Katherine Rothamel,
Rachael N McVicar,
Elizabeth M Kwong,
Krysten L Jones,
Hsuan-Lin Her,
Chun-Yuan Chen,
Anthony Q Vu,
Wenhao Jin,
Samuel S Park,
Phuong Le,
Kristopher W Brannan,
Eric R Kofman,
Yanhua Li,
Alexandra T Tankka,
Kevin D Dong,
Yan Song,
Aaron F Carlin,
Eric L Van Nostrand,
Sandra L Leibel,
Gene W Yeo
bioRxiv : the preprint server for biology
· 2022
Abstract
The COVID-19 pandemic is caused by severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2). The betacoronvirus has a positive sense RNA genome which encodes for several RNA binding proteins. Here, we use enhanced crosslinking and immunoprecipitation to investigate SARS-CoV-2 protein interactions with viral and host RNAs in authentic virus-infected cells. SARS-CoV-2 proteins, NSP8, NSP12, and nucleocapsid display distinct preferences to specific regions in the RNA viral genome, providing evidence for their shared and separate roles in replication, transcription, and viral packaging. SARS-CoV-2 proteins expressed in human lung epithelial cells bind to 4773 unique host coding RNAs. Nine SARS-CoV-2 proteins upregulate target gene expression, including NSP12 and ORF9c, whose RNA substrates are associated with pathways in protein N-linked glycosylation ER processing and mitochondrial processes. Furthermore, siRNA knockdown of host genes targeted by viral proteins in human lung organoid cells identify potential antiviral host targets across different SARS-CoV-2 variants. Conversely, NSP9 inhibits host gene expression by blocking mRNA export and dampens cytokine productions, including interleukin-1α/β. Our viral protein-RNA interactome provides a catalog of potential therapeutic targets and offers insight into the etiology of COVID-19 as a safeguard against future pandemics.
Funding
S10 OD026929
NIH HHS
(United States)
T32 CA067754
NCI NIH HHS
(United States)
R00 HG009530
NHGRI NIH HHS
(United States)
K08 AI130381
NIAID NIH HHS
(United States)
Linked Datasets (4)
Discovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins [eCLIP]
Homo sapiens588 data files
| File | Type | Size |
|---|---|---|
| E-IN1_S86_L002_R1_001.fastq.gz | OTHER | 525.9 MB |
| E-IN1_S86_L002_R1_001.fastq.gz | OTHER | 525.9 MB |
| E-IN1_S86_L002_R1_001.fastq.gz | OTHER | 525.9 MB |
| E-IN1_S86_L002_R1_001.fastq.gz | OTHER | 525.9 MB |
| E-IN2_S87_L002_R1_001.fastq.gz | OTHER | 766.1 MB |
| E-IN2_S87_L002_R1_001.fastq.gz | OTHER | 766.1 MB |
| E-IN2_S87_L002_R1_001.fastq.gz | OTHER | 766.1 MB |
| E-IN2_S87_L002_R1_001.fastq.gz | OTHER | 766.1 MB |
| E-IP1_S65_L002_R1_001.fastq.gz | OTHER | 2.1 GB |
| E-IP1_S65_L002_R1_001.fastq.gz | OTHER | 2.1 GB |
| E-IP1_S65_L002_R1_001.fastq.gz | OTHER | 2.1 GB |
| E-IP1_S65_L002_R1_001.fastq.gz | OTHER | 2.1 GB |
| E-IP2_S66_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| E-IP2_S66_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| E-IP2_S66_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| E-IP2_S66_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| M-IN1_S53_L002_R1_001.fastq.gz | OTHER | 519.3 MB |
| M-IN1_S53_L002_R1_001.fastq.gz | OTHER | 519.3 MB |
| M-IN1_S53_L002_R1_001.fastq.gz | OTHER | 519.3 MB |
| M-IN1_S53_L002_R1_001.fastq.gz | OTHER | 519.3 MB |
| M-IN2_S54_L002_R1_001.fastq.gz | OTHER | 537.8 MB |
| M-IN2_S54_L002_R1_001.fastq.gz | OTHER | 537.8 MB |
| M-IN2_S54_L002_R1_001.fastq.gz | OTHER | 537.8 MB |
| M-IN2_S54_L002_R1_001.fastq.gz | OTHER | 537.8 MB |
| M-IP1_S97_L002_R1_001.fastq.gz | OTHER | 661.8 MB |
| M-IP1_S97_L002_R1_001.fastq.gz | OTHER | 661.8 MB |
| M-IP1_S97_L002_R1_001.fastq.gz | OTHER | 661.8 MB |
| M-IP1_S97_L002_R1_001.fastq.gz | OTHER | 661.8 MB |
| M-IP2_S98_L002_R1_001.fastq.gz | OTHER | 605.7 MB |
| M-IP2_S98_L002_R1_001.fastq.gz | OTHER | 605.7 MB |
| M-IP2_S98_L002_R1_001.fastq.gz | OTHER | 605.7 MB |
| M-IP2_S98_L002_R1_001.fastq.gz | OTHER | 605.7 MB |
| N-IN1_S74_L002_R1_001.fastq.gz | OTHER | 406.4 MB |
| N-IN1_S74_L002_R1_001.fastq.gz | OTHER | 406.4 MB |
| N-IN1_S74_L002_R1_001.fastq.gz | OTHER | 406.4 MB |
| N-IN1_S74_L002_R1_001.fastq.gz | OTHER | 406.4 MB |
| N-IN2_S76_L002_R1_001.fastq.gz | OTHER | 560.1 MB |
| N-IN2_S76_L002_R1_001.fastq.gz | OTHER | 560.1 MB |
| N-IN2_S76_L002_R1_001.fastq.gz | OTHER | 560.1 MB |
| N-IN2_S76_L002_R1_001.fastq.gz | OTHER | 560.1 MB |
| N-IP1_S75_L002_R1_001.fastq.gz | OTHER | 474.7 MB |
| N-IP1_S75_L002_R1_001.fastq.gz | OTHER | 474.7 MB |
| N-IP1_S75_L002_R1_001.fastq.gz | OTHER | 474.7 MB |
| N-IP1_S75_L002_R1_001.fastq.gz | OTHER | 474.7 MB |
| N-IP2_S77_L002_R1_001.fastq.gz | OTHER | 798.6 MB |
| N-IP2_S77_L002_R1_001.fastq.gz | OTHER | 798.6 MB |
| N-IP2_S77_L002_R1_001.fastq.gz | OTHER | 798.6 MB |
| N-IP2_S77_L002_R1_001.fastq.gz | OTHER | 798.6 MB |
| nsp10-IN1__S63_L002_R1_001.fastq.gz | OTHER | 743.9 MB |
| nsp10-IN1__S63_L002_R1_001.fastq.gz | OTHER | 743.9 MB |
| nsp10-IN1__S63_L002_R1_001.fastq.gz | OTHER | 743.9 MB |
| nsp10-IN1__S63_L002_R1_001.fastq.gz | OTHER | 743.9 MB |
| nsp10-IN1_S64_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp10-IN1_S64_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp10-IN1_S64_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp10-IN1_S64_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp10-IP1_S103_L002_R1_001.fastq.gz | OTHER | 813.4 MB |
| nsp10-IP1_S103_L002_R1_001.fastq.gz | OTHER | 813.4 MB |
| nsp10-IP1_S103_L002_R1_001.fastq.gz | OTHER | 813.4 MB |
| nsp10-IP1_S103_L002_R1_001.fastq.gz | OTHER | 813.4 MB |
| nsp10-IP2_S104_L002_R1_001.fastq.gz | OTHER | 721.5 MB |
| nsp10-IP2_S104_L002_R1_001.fastq.gz | OTHER | 721.5 MB |
| nsp10-IP2_S104_L002_R1_001.fastq.gz | OTHER | 721.5 MB |
| nsp10-IP2_S104_L002_R1_001.fastq.gz | OTHER | 721.5 MB |
| Nsp11-1-IN_S28_L007_R1_001.fastq.gz | OTHER | 407.0 MB |
| Nsp11-1-IN_S28_L007_R1_001.fastq.gz | OTHER | 407.0 MB |
| Nsp11-1-IN_S28_L007_R1_001.fastq.gz | OTHER | 407.0 MB |
| Nsp11-1-IN_S28_L007_R1_001.fastq.gz | OTHER | 407.0 MB |
| NSP11_1_IP_S47_L003_R1_001.fastq.gz | OTHER | 734.6 MB |
| NSP11_1_IP_S47_L003_R1_001.fastq.gz | OTHER | 734.6 MB |
| NSP11_1_IP_S47_L003_R1_001.fastq.gz | OTHER | 734.6 MB |
| NSP11_1_IP_S47_L003_R1_001.fastq.gz | OTHER | 734.6 MB |
| NSP11_2_iN_S18_L003_R1_001.fastq.gz | OTHER | 847.0 MB |
| NSP11_2_iN_S18_L003_R1_001.fastq.gz | OTHER | 847.0 MB |
| NSP11_2_iN_S18_L003_R1_001.fastq.gz | OTHER | 847.0 MB |
| NSP11_2_iN_S18_L003_R1_001.fastq.gz | OTHER | 847.0 MB |
| NSP11_2_IP_S44_L003_R1_001.fastq.gz | OTHER | 727.6 MB |
| NSP11_2_IP_S44_L003_R1_001.fastq.gz | OTHER | 727.6 MB |
| NSP11_2_IP_S44_L003_R1_001.fastq.gz | OTHER | 727.6 MB |
| NSP11_2_IP_S44_L003_R1_001.fastq.gz | OTHER | 727.6 MB |
| NSP1-1-IN_S1_L002_R1_001.fastq.gz | OTHER | 343.2 MB |
| NSP1-1-IN_S1_L002_R1_001.fastq.gz | OTHER | 343.2 MB |
| NSP1-1-IN_S1_L002_R1_001.fastq.gz | OTHER | 343.2 MB |
| NSP1-1-IN_S1_L002_R1_001.fastq.gz | OTHER | 343.2 MB |
| NSP1-1-IP_S2_L002_R1_001.fastq.gz | OTHER | 1.4 GB |
| NSP1-1-IP_S2_L002_R1_001.fastq.gz | OTHER | 1.4 GB |
| NSP1-1-IP_S2_L002_R1_001.fastq.gz | OTHER | 1.4 GB |
| NSP1-1-IP_S2_L002_R1_001.fastq.gz | OTHER | 1.4 GB |
| nsp12-1-IN_S24_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp12-1-IN_S24_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp12-1-IN_S24_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp12-1-IN_S24_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp12-1-IP_S42_L004_R1_001.fastq.gz | OTHER | 1.4 GB |
| nsp12-1-IP_S42_L004_R1_001.fastq.gz | OTHER | 1.4 GB |
| nsp12-1-IP_S42_L004_R1_001.fastq.gz | OTHER | 1.4 GB |
| nsp12-1-IP_S42_L004_R1_001.fastq.gz | OTHER | 1.4 GB |
| nsp12-2-IN_S26_L004_R1_001.fastq.gz | OTHER | 2.6 GB |
| nsp12-2-IN_S26_L004_R1_001.fastq.gz | OTHER | 2.6 GB |
| nsp12-2-IN_S26_L004_R1_001.fastq.gz | OTHER | 2.6 GB |
| nsp12-2-IN_S26_L004_R1_001.fastq.gz | OTHER | 2.6 GB |
| nsp12-2-IP_S43_L004_R1_001.fastq.gz | OTHER | 1.4 GB |
| nsp12-2-IP_S43_L004_R1_001.fastq.gz | OTHER | 1.4 GB |
| nsp12-2-IP_S43_L004_R1_001.fastq.gz | OTHER | 1.4 GB |
| nsp12-2-IP_S43_L004_R1_001.fastq.gz | OTHER | 1.4 GB |
| NSP1-2-IP_S4_L002_R1_001.fastq.gz | OTHER | 533.0 MB |
| NSP1-2-IP_S4_L002_R1_001.fastq.gz | OTHER | 533.0 MB |
| NSP1-2-IP_S4_L002_R1_001.fastq.gz | OTHER | 533.0 MB |
| NSP1-2-IP_S4_L002_R1_001.fastq.gz | OTHER | 533.0 MB |
| NSP13_1_IN_S36_L003_R1_001.fastq.gz | OTHER | 811.0 MB |
| NSP13_1_IN_S36_L003_R1_001.fastq.gz | OTHER | 811.0 MB |
| NSP13_1_IN_S36_L003_R1_001.fastq.gz | OTHER | 811.0 MB |
| NSP13_1_IN_S36_L003_R1_001.fastq.gz | OTHER | 811.0 MB |
| NSP13_1_IP_S45_L003_R1_001.fastq.gz | OTHER | 771.9 MB |
| NSP13_1_IP_S45_L003_R1_001.fastq.gz | OTHER | 771.9 MB |
| NSP13_1_IP_S45_L003_R1_001.fastq.gz | OTHER | 771.9 MB |
| NSP13_1_IP_S45_L003_R1_001.fastq.gz | OTHER | 771.9 MB |
| Nsp13-2-IN_S29_L007_R1_001.fastq.gz | OTHER | 388.5 MB |
| Nsp13-2-IN_S29_L007_R1_001.fastq.gz | OTHER | 388.5 MB |
| Nsp13-2-IN_S29_L007_R1_001.fastq.gz | OTHER | 388.5 MB |
| Nsp13-2-IN_S29_L007_R1_001.fastq.gz | OTHER | 388.5 MB |
| NSP13_2_IP_S38_L003_R1_001.fastq.gz | OTHER | 804.8 MB |
| NSP13_2_IP_S38_L003_R1_001.fastq.gz | OTHER | 804.8 MB |
| NSP13_2_IP_S38_L003_R1_001.fastq.gz | OTHER | 804.8 MB |
| NSP13_2_IP_S38_L003_R1_001.fastq.gz | OTHER | 804.8 MB |
| NSP14_1_IN_S2_L003_R1_001.fastq.gz | OTHER | 717.5 MB |
| NSP14_1_IN_S2_L003_R1_001.fastq.gz | OTHER | 717.5 MB |
| NSP14_1_IN_S2_L003_R1_001.fastq.gz | OTHER | 717.5 MB |
| NSP14_1_IN_S2_L003_R1_001.fastq.gz | OTHER | 717.5 MB |
| NSP14_1_IP_S31_L003_R1_001.fastq.gz | OTHER | 641.1 MB |
| NSP14_1_IP_S31_L003_R1_001.fastq.gz | OTHER | 641.1 MB |
| NSP14_1_IP_S31_L003_R1_001.fastq.gz | OTHER | 641.1 MB |
| NSP14_1_IP_S31_L003_R1_001.fastq.gz | OTHER | 641.1 MB |
| NSP14_2_iN_S3_L003_R1_001.fastq.gz | OTHER | 810.5 MB |
| NSP14_2_iN_S3_L003_R1_001.fastq.gz | OTHER | 810.5 MB |
| NSP14_2_iN_S3_L003_R1_001.fastq.gz | OTHER | 810.5 MB |
| NSP14_2_iN_S3_L003_R1_001.fastq.gz | OTHER | 810.5 MB |
| NSP14_2_IP_S22_L003_R1_001.fastq.gz | OTHER | 719.3 MB |
| NSP14_2_IP_S22_L003_R1_001.fastq.gz | OTHER | 719.3 MB |
| NSP14_2_IP_S22_L003_R1_001.fastq.gz | OTHER | 719.3 MB |
| NSP14_2_IP_S22_L003_R1_001.fastq.gz | OTHER | 719.3 MB |
| nsp15-IN1_S78_L002_R1_001.fastq.gz | OTHER | 307.1 MB |
| nsp15-IN1_S78_L002_R1_001.fastq.gz | OTHER | 307.1 MB |
| nsp15-IN2_S79_L002_R1_001.fastq.gz | OTHER | 673.1 MB |
| nsp15-IN2_S79_L002_R1_001.fastq.gz | OTHER | 673.1 MB |
| nsp15-IN2_S79_L002_R1_001.fastq.gz | OTHER | 673.1 MB |
| nsp15-IN2_S79_L002_R1_001.fastq.gz | OTHER | 673.1 MB |
| nsp15-IP1_S45_L002_R1_001.fastq.gz | OTHER | 613.1 MB |
| nsp15-IP1_S45_L002_R1_001.fastq.gz | OTHER | 613.1 MB |
| nsp15-IP1_S45_L002_R1_001.fastq.gz | OTHER | 613.1 MB |
| nsp15-IP1_S45_L002_R1_001.fastq.gz | OTHER | 613.1 MB |
| nsp15-IP2_S46_L002_R1_001.fastq.gz | OTHER | 470.8 MB |
| nsp15-IP2_S46_L002_R1_001.fastq.gz | OTHER | 470.8 MB |
| nsp15-IP2_S46_L002_R1_001.fastq.gz | OTHER | 470.8 MB |
| nsp15-IP2_S46_L002_R1_001.fastq.gz | OTHER | 470.8 MB |
| NSP16-1-IN_S9_L002_R1_001.fastq.gz | OTHER | 442.0 MB |
| NSP16-1-IN_S9_L002_R1_001.fastq.gz | OTHER | 442.0 MB |
| NSP16-1-IN_S9_L002_R1_001.fastq.gz | OTHER | 442.0 MB |
| NSP16-1-IN_S9_L002_R1_001.fastq.gz | OTHER | 442.0 MB |
| NSP16-1-IP_S10_L002_R1_001.fastq.gz | OTHER | 465.3 MB |
| NSP16-1-IP_S10_L002_R1_001.fastq.gz | OTHER | 465.3 MB |
| NSP16-1-IP_S10_L002_R1_001.fastq.gz | OTHER | 465.3 MB |
| NSP16-1-IP_S10_L002_R1_001.fastq.gz | OTHER | 465.3 MB |
| NSP16-2-IN_S11_L002_R1_001.fastq.gz | OTHER | 389.8 MB |
| NSP16-2-IN_S11_L002_R1_001.fastq.gz | OTHER | 389.8 MB |
| NSP16-2-IN_S11_L002_R1_001.fastq.gz | OTHER | 389.8 MB |
| NSP16-2-IN_S11_L002_R1_001.fastq.gz | OTHER | 389.8 MB |
| NSP16-2-IP_S12_L002_R1_001.fastq.gz | OTHER | 436.8 MB |
| NSP16-2-IP_S12_L002_R1_001.fastq.gz | OTHER | 436.8 MB |
| NSP16-2-IP_S12_L002_R1_001.fastq.gz | OTHER | 436.8 MB |
| NSP16-2-IP_S12_L002_R1_001.fastq.gz | OTHER | 436.8 MB |
| nsp2-1-IN_S3_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp2-1-IN_S3_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp2-1-IN_S3_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp2-1-IN_S3_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp2-1-IP_S8_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp2-1-IP_S8_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp2-1-IP_S8_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp2-1-IP_S8_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp2-2-IN_S4_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp2-2-IN_S4_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp2-2-IN_S4_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp2-2-IN_S4_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp2-2-IP_S11_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp2-2-IP_S11_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp2-2-IP_S11_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp2-2-IP_S11_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp3-1-IN_S5_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp3-1-IN_S5_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp3-1-IN_S5_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp3-1-IN_S5_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp3-1-IP_S9_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp3-1-IP_S9_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp3-1-IP_S9_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp3-1-IP_S9_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp3-2-IN_S6_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp3-2-IN_S6_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp3-2-IN_S6_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp3-2-IN_S6_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp3-2-IP_S12_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp3-2-IP_S12_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp3-2-IP_S12_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp3-2-IP_S12_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| NSP4_1_IN_S5_L003_R1_001.fastq.gz | OTHER | 743.2 MB |
| NSP4_1_IN_S5_L003_R1_001.fastq.gz | OTHER | 743.2 MB |
| NSP4_1_IN_S5_L003_R1_001.fastq.gz | OTHER | 743.2 MB |
| NSP4_1_IN_S5_L003_R1_001.fastq.gz | OTHER | 743.2 MB |
| Nsp4-1-IP_S27_L007_R1_001.fastq.gz | OTHER | 396.0 MB |
| Nsp4-1-IP_S27_L007_R1_001.fastq.gz | OTHER | 396.0 MB |
| Nsp4-1-IP_S27_L007_R1_001.fastq.gz | OTHER | 396.0 MB |
| Nsp4-1-IP_S27_L007_R1_001.fastq.gz | OTHER | 396.0 MB |
| NSP4_2_iN_S4_L003_R1_001.fastq.gz | OTHER | 731.3 MB |
| NSP4_2_iN_S4_L003_R1_001.fastq.gz | OTHER | 731.3 MB |
| NSP4_2_iN_S4_L003_R1_001.fastq.gz | OTHER | 731.3 MB |
| NSP4_2_iN_S4_L003_R1_001.fastq.gz | OTHER | 731.3 MB |
| NSP4_2_IP_S28_L003_R1_001.fastq.gz | OTHER | 737.6 MB |
| NSP4_2_IP_S28_L003_R1_001.fastq.gz | OTHER | 737.6 MB |
| NSP4_2_IP_S28_L003_R1_001.fastq.gz | OTHER | 737.6 MB |
| NSP4_2_IP_S28_L003_R1_001.fastq.gz | OTHER | 737.6 MB |
| nsp5-1-IN_S20_L004_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp5-1-IN_S20_L004_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp5-1-IN_S20_L004_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp5-1-IN_S20_L004_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp5-1-IP_S44_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp5-1-IP_S44_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp5-1-IP_S44_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp5-1-IP_S44_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp5-2-IN_S17_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp5-2-IN_S17_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp5-2-IN_S17_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp5-2-IN_S17_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp5-2-IP_S39_L004_R1_001.fastq.gz | OTHER | 2.7 GB |
| nsp5-2-IP_S39_L004_R1_001.fastq.gz | OTHER | 2.7 GB |
| nsp5-2-IP_S39_L004_R1_001.fastq.gz | OTHER | 2.7 GB |
| nsp5-2-IP_S39_L004_R1_001.fastq.gz | OTHER | 2.7 GB |
| nsp5_C145A-IN1_S47_L002_R1_001.fastq.gz | OTHER | 557.6 MB |
| nsp5_C145A-IN1_S47_L002_R1_001.fastq.gz | OTHER | 557.6 MB |
| nsp5_C145A-IN1_S47_L002_R1_001.fastq.gz | OTHER | 557.6 MB |
| nsp5_C145A-IN1_S47_L002_R1_001.fastq.gz | OTHER | 557.6 MB |
| nsp5_C145A-IN2_S49_L002_R1_001.fastq.gz | OTHER | 628.0 MB |
| nsp5_C145A-IN2_S49_L002_R1_001.fastq.gz | OTHER | 628.0 MB |
| nsp5_C145A-IN2_S49_L002_R1_001.fastq.gz | OTHER | 628.0 MB |
| nsp5_C145A-IN2_S49_L002_R1_001.fastq.gz | OTHER | 628.0 MB |
| nsp5_C145A-IP1_S48_L002_R1_001.fastq.gz | OTHER | 522.0 MB |
| nsp5_C145A-IP1_S48_L002_R1_001.fastq.gz | OTHER | 522.0 MB |
| nsp5_C145A-IP1_S48_L002_R1_001.fastq.gz | OTHER | 522.0 MB |
| nsp5_C145A-IP1_S48_L002_R1_001.fastq.gz | OTHER | 522.0 MB |
| nsp5_C145A-IP2_S50_L002_R1_001.fastq.gz | OTHER | 528.5 MB |
| nsp5_C145A-IP2_S50_L002_R1_001.fastq.gz | OTHER | 528.5 MB |
| nsp5_C145A-IP2_S50_L002_R1_001.fastq.gz | OTHER | 528.5 MB |
| nsp5_C145A-IP2_S50_L002_R1_001.fastq.gz | OTHER | 528.5 MB |
| nsp6-1-IN_S2_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp6-1-IN_S2_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp6-1-IN_S2_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp6-1-IN_S2_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp6-1-IP_S10_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp6-1-IP_S10_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp6-1-IP_S10_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp6-1-IP_S10_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| nsp6-2-IN_S1_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp6-2-IN_S1_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp6-2-IN_S1_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp6-2-IN_S1_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| nsp6-2-IP_S7_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp6-2-IP_S7_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp6-2-IP_S7_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp6-2-IP_S7_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| nsp7-1-IN_S13_L004_R1_001.fastq.gz | OTHER | 968.5 MB |
| nsp7-1-IN_S13_L004_R1_001.fastq.gz | OTHER | 968.5 MB |
| nsp7-1-IN_S13_L004_R1_001.fastq.gz | OTHER | 968.5 MB |
| nsp7-1-IN_S13_L004_R1_001.fastq.gz | OTHER | 968.5 MB |
| nsp7-1-IP_S16_L004_R1_001.fastq.gz | OTHER | 829.7 MB |
| nsp7-1-IP_S16_L004_R1_001.fastq.gz | OTHER | 829.7 MB |
| nsp7-1-IP_S16_L004_R1_001.fastq.gz | OTHER | 829.7 MB |
| nsp7-1-IP_S16_L004_R1_001.fastq.gz | OTHER | 829.7 MB |
| nsp7-2-IN_S14_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp7-2-IN_S14_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp7-2-IN_S14_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp7-2-IN_S14_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| nsp7-2-IP_S15_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| nsp7-2-IP_S15_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| nsp7-2-IP_S15_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| nsp7-2-IP_S15_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| NSP8_1_IN_S35_L003_R1_001.fastq.gz | OTHER | 649.7 MB |
| NSP8_1_IN_S35_L003_R1_001.fastq.gz | OTHER | 649.7 MB |
| NSP8_1_IN_S35_L003_R1_001.fastq.gz | OTHER | 649.7 MB |
| NSP8_1_IN_S35_L003_R1_001.fastq.gz | OTHER | 649.7 MB |
| NSP8_1_IP_S39_L003_R1_001.fastq.gz | OTHER | 1.0 GB |
| NSP8_1_IP_S39_L003_R1_001.fastq.gz | OTHER | 1.0 GB |
| NSP8_1_IP_S39_L003_R1_001.fastq.gz | OTHER | 1.0 GB |
| NSP8_1_IP_S39_L003_R1_001.fastq.gz | OTHER | 1.0 GB |
| NSP8_2_iN_S33_L003_R1_001.fastq.gz | OTHER | 757.6 MB |
| NSP8_2_iN_S33_L003_R1_001.fastq.gz | OTHER | 757.6 MB |
| NSP8_2_iN_S33_L003_R1_001.fastq.gz | OTHER | 757.6 MB |
| NSP8_2_iN_S33_L003_R1_001.fastq.gz | OTHER | 757.6 MB |
| NSP8_2_IP_S43_L003_R1_001.fastq.gz | OTHER | 942.8 MB |
| NSP8_2_IP_S43_L003_R1_001.fastq.gz | OTHER | 942.8 MB |
| NSP8_2_IP_S43_L003_R1_001.fastq.gz | OTHER | 942.8 MB |
| NSP8_2_IP_S43_L003_R1_001.fastq.gz | OTHER | 942.8 MB |
| nsp8-IP2_S57_L002_R1_001.fastq.InvRNA2.fq.gz | OTHER | 407.6 MB |
| nsp8-IP2_S57_L002_R1_001.fastq.InvRNA2.fq.gz | OTHER | 407.6 MB |
| nsp8-IP2_S57_L002_R1_001.fastq.InvRNA2.fq.gz | OTHER | 407.6 MB |
| nsp8-IP2_S57_L002_R1_001.fastq.InvRNA2.fq.gz | OTHER | 407.6 MB |
| nsp9-1-IN_S5_L001_R1_001.fastq.gz | OTHER | 958.0 MB |
| nsp9-1-IN_S5_L001_R1_001.fastq.gz | OTHER | 958.0 MB |
| nsp9-1-IN_S5_L001_R1_001.fastq.gz | OTHER | 958.0 MB |
| nsp9-1-IN_S5_L001_R1_001.fastq.gz | OTHER | 958.0 MB |
| nsp9-1-IP_S36_L001_R1_001.fastq.gz | OTHER | 775.2 MB |
| nsp9-1-IP_S36_L001_R1_001.fastq.gz | OTHER | 775.2 MB |
| nsp9-1-IP_S36_L001_R1_001.fastq.gz | OTHER | 775.2 MB |
| nsp9-1-IP_S36_L001_R1_001.fastq.gz | OTHER | 775.2 MB |
| nsp9-2-IN_S4_L001_R1_001.fastq.gz | OTHER | 872.3 MB |
| nsp9-2-IN_S4_L001_R1_001.fastq.gz | OTHER | 872.3 MB |
| nsp9-2-IN_S4_L001_R1_001.fastq.gz | OTHER | 872.3 MB |
| nsp9-2-IN_S4_L001_R1_001.fastq.gz | OTHER | 872.3 MB |
| nsp9-2-IP_S31_L001_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp9-2-IP_S31_L001_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp9-2-IP_S31_L001_R1_001.fastq.gz | OTHER | 1.1 GB |
| nsp9-2-IP_S31_L001_R1_001.fastq.gz | OTHER | 1.1 GB |
| ORF10_1_IN_S14_L003_R1_001.fastq.gz | OTHER | 661.7 MB |
| ORF10_1_IN_S14_L003_R1_001.fastq.gz | OTHER | 661.7 MB |
| ORF10_1_IN_S14_L003_R1_001.fastq.gz | OTHER | 661.7 MB |
| ORF10_1_IN_S14_L003_R1_001.fastq.gz | OTHER | 661.7 MB |
| ORF10_1_IP_S48_L003_R1_001.fastq.gz | OTHER | 673.3 MB |
| ORF10_1_IP_S48_L003_R1_001.fastq.gz | OTHER | 673.3 MB |
| ORF10_1_IP_S48_L003_R1_001.fastq.gz | OTHER | 673.3 MB |
| ORF10_1_IP_S48_L003_R1_001.fastq.gz | OTHER | 673.3 MB |
| ORF10_2_iN_S7_L003_R1_001.fastq.gz | OTHER | 738.7 MB |
| ORF10_2_iN_S7_L003_R1_001.fastq.gz | OTHER | 738.7 MB |
| ORF10_2_iN_S7_L003_R1_001.fastq.gz | OTHER | 738.7 MB |
| ORF10_2_iN_S7_L003_R1_001.fastq.gz | OTHER | 738.7 MB |
| ORF10_2_IP_S41_L003_R1_001.fastq.gz | OTHER | 762.8 MB |
| ORF10_2_IP_S41_L003_R1_001.fastq.gz | OTHER | 762.8 MB |
| ORF10_2_IP_S41_L003_R1_001.fastq.gz | OTHER | 762.8 MB |
| ORF10_2_IP_S41_L003_R1_001.fastq.gz | OTHER | 762.8 MB |
| ORF3a-IN1_S82_L002_R1_001.fastq.gz | OTHER | 481.0 MB |
| ORF3a-IN1_S82_L002_R1_001.fastq.gz | OTHER | 481.0 MB |
| ORF3a-IN1_S82_L002_R1_001.fastq.gz | OTHER | 481.0 MB |
| ORF3a-IN1_S82_L002_R1_001.fastq.gz | OTHER | 481.0 MB |
| ORF3a-IN2_S81_L002_R1_001.fastq.gz | OTHER | 538.6 MB |
| ORF3a-IN2_S81_L002_R1_001.fastq.gz | OTHER | 538.6 MB |
| ORF3a-IN2_S81_L002_R1_001.fastq.gz | OTHER | 538.6 MB |
| ORF3a-IN2_S81_L002_R1_001.fastq.gz | OTHER | 538.6 MB |
| ORF3a-IP1_S51_L002_R1_001.fastq.gz | OTHER | 601.0 MB |
| ORF3a-IP1_S51_L002_R1_001.fastq.gz | OTHER | 601.0 MB |
| ORF3a-IP1_S51_L002_R1_001.fastq.gz | OTHER | 601.0 MB |
| ORF3a-IP1_S51_L002_R1_001.fastq.gz | OTHER | 601.0 MB |
| ORF3a-IP2_S52_L002_R1_001.fastq.gz | OTHER | 632.0 MB |
| ORF3a-IP2_S52_L002_R1_001.fastq.gz | OTHER | 632.0 MB |
| ORF3a-IP2_S52_L002_R1_001.fastq.gz | OTHER | 632.0 MB |
| ORF3a-IP2_S52_L002_R1_001.fastq.gz | OTHER | 632.0 MB |
| orf3b-1-IN_S23_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf3b-1-IN_S23_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf3b-1-IN_S23_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf3b-1-IN_S23_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf3b-1-IP_S46_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf3b-1-IP_S46_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf3b-1-IP_S46_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf3b-1-IP_S46_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf3b-2-IN_S22_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| orf3b-2-IN_S22_L004_R1_001.fastq.gz | OTHER | 1.9 GB |
| orf3b-2-IP_S40_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf3b-2-IP_S40_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf3b-2-IP_S40_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf3b-2-IP_S40_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| ORF6-IN1_S88_L002_R1_001.fastq.gz | OTHER | 512.9 MB |
| ORF6-IN1_S88_L002_R1_001.fastq.gz | OTHER | 512.9 MB |
| ORF6-IN2_S89_L002_R1_001.fastq.gz | OTHER | 522.2 MB |
| ORF6-IN2_S89_L002_R1_001.fastq.gz | OTHER | 522.2 MB |
| ORF6-IN2_S89_L002_R1_001.fastq.gz | OTHER | 522.2 MB |
| ORF6-IN2_S89_L002_R1_001.fastq.gz | OTHER | 522.2 MB |
| ORF6-IP1_S67_L002_R1_001.fastq.gz | OTHER | 874.8 MB |
| ORF6-IP1_S67_L002_R1_001.fastq.gz | OTHER | 874.8 MB |
| ORF6-IP1_S67_L002_R1_001.fastq.gz | OTHER | 874.8 MB |
| ORF6-IP1_S67_L002_R1_001.fastq.gz | OTHER | 874.8 MB |
| ORF6-IP2_S68_L002_R1_001.fastq.gz | OTHER | 956.5 MB |
| ORF6-IP2_S68_L002_R1_001.fastq.gz | OTHER | 956.5 MB |
| ORF6-IP2_S68_L002_R1_001.fastq.gz | OTHER | 956.5 MB |
| ORF6-IP2_S68_L002_R1_001.fastq.gz | OTHER | 956.5 MB |
| ORF7a-IN1_S59_L002_R1_001.fastq.gz | OTHER | 1.9 GB |
| ORF7a-IN1_S59_L002_R1_001.fastq.gz | OTHER | 1.9 GB |
| ORF7a-IN1_S59_L002_R1_001.fastq.gz | OTHER | 1.9 GB |
| ORF7a-IN1_S59_L002_R1_001.fastq.gz | OTHER | 1.9 GB |
| ORF7a-IN2_S60_L002_R1_001.fastq.gz | OTHER | 1.3 GB |
| ORF7a-IN2_S60_L002_R1_001.fastq.gz | OTHER | 1.3 GB |
| ORF7a-IN2_S60_L002_R1_001.fastq.gz | OTHER | 1.3 GB |
| ORF7a-IN2_S60_L002_R1_001.fastq.gz | OTHER | 1.3 GB |
| ORF7a-IP1_S101_L002_R1_001.fastq.gz | OTHER | 590.3 MB |
| ORF7a-IP1_S101_L002_R1_001.fastq.gz | OTHER | 590.3 MB |
| ORF7a-IP1_S101_L002_R1_001.fastq.gz | OTHER | 590.3 MB |
| ORF7a-IP1_S101_L002_R1_001.fastq.gz | OTHER | 590.3 MB |
| ORF7a-IP2_S102_L002_R1_001.fastq.gz | OTHER | 774.5 MB |
| ORF7a-IP2_S102_L002_R1_001.fastq.gz | OTHER | 774.5 MB |
| ORF7a-IP2_S102_L002_R1_001.fastq.gz | OTHER | 774.5 MB |
| ORF7a-IP2_S102_L002_R1_001.fastq.gz | OTHER | 774.5 MB |
| orf7b-1-IN_S29_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf7b-1-IN_S29_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf7b-1-IN_S29_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf7b-1-IN_S29_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf7b-1-IP_S52_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf7b-1-IP_S52_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf7b-1-IP_S52_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf7b-1-IP_S52_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf7b-2-IN_S21_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf7b-2-IN_S21_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf7b-2-IN_S21_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf7b-2-IN_S21_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf7b-2-IP_S38_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf7b-2-IP_S38_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf7b-2-IP_S38_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf7b-2-IP_S38_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf8-1-IN_S47_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf8-1-IN_S47_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf8-1-IN_S47_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf8-1-IN_S47_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf8-1-IP_S57_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf8-1-IP_S57_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf8-1-IP_S57_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf8-1-IP_S57_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf8-2-IN_S37_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf8-2-IN_S37_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf8-2-IN_S37_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf8-2-IN_S37_L004_R1_001.fastq.gz | OTHER | 1.3 GB |
| orf8-2-IP_S55_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf8-2-IP_S55_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf8-2-IP_S55_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf8-2-IP_S55_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf9b-1-IN_S30_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf9b-1-IN_S30_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf9b-1-IN_S30_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf9b-1-IN_S30_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf9b-1-IP_S54_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf9b-1-IP_S54_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf9b-1-IP_S54_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf9b-1-IP_S54_L004_R1_001.fastq.gz | OTHER | 1.2 GB |
| orf9b-2-IN_S32_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf9b-2-IN_S32_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf9b-2-IN_S32_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf9b-2-IN_S32_L004_R1_001.fastq.gz | OTHER | 1.5 GB |
| orf9b-2-IP_S41_L004_R1_001.fastq.gz | OTHER | 3.2 GB |
| orf9b-2-IP_S41_L004_R1_001.fastq.gz | OTHER | 3.2 GB |
| orf9b-2-IP_S41_L004_R1_001.fastq.gz | OTHER | 3.2 GB |
| orf9b-2-IP_S41_L004_R1_001.fastq.gz | OTHER | 3.2 GB |
| orf9c-1-IN_S27_L004_R1_001.fastq.gz | OTHER | 2.4 GB |
| orf9c-1-IN_S27_L004_R1_001.fastq.gz | OTHER | 2.4 GB |
| orf9c-1-IP_S34_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf9c-1-IP_S34_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf9c-1-IP_S34_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf9c-1-IP_S34_L004_R1_001.fastq.gz | OTHER | 1.6 GB |
| orf9c-2-IN_S35_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| orf9c-2-IN_S35_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| orf9c-2-IN_S35_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| orf9c-2-IN_S35_L004_R1_001.fastq.gz | OTHER | 1.7 GB |
| orf9c-2-IP_S53_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf9c-2-IP_S53_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf9c-2-IP_S53_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| orf9c-2-IP_S53_L004_R1_001.fastq.gz | OTHER | 1.8 GB |
| SPIKE_1_IN_S16_L003_R1_001.fastq.gz | OTHER | 750.8 MB |
| SPIKE_1_IN_S16_L003_R1_001.fastq.gz | OTHER | 750.8 MB |
| SPIKE_1_IN_S16_L003_R1_001.fastq.gz | OTHER | 750.8 MB |
| SPIKE_1_IN_S16_L003_R1_001.fastq.gz | OTHER | 750.8 MB |
| SPIKE_1_IP_S42_L003_R1_001.fastq.gz | OTHER | 1002.8 MB |
| SPIKE_1_IP_S42_L003_R1_001.fastq.gz | OTHER | 1002.8 MB |
| SPIKE_1_IP_S42_L003_R1_001.fastq.gz | OTHER | 1002.8 MB |
| SPIKE_1_IP_S42_L003_R1_001.fastq.gz | OTHER | 1002.8 MB |
| SPIKE_2_iN_S17_L003_R1_001.fastq.gz | OTHER | 675.1 MB |
| SPIKE_2_iN_S17_L003_R1_001.fastq.gz | OTHER | 675.1 MB |
| SPIKE_2_iN_S17_L003_R1_001.fastq.gz | OTHER | 675.1 MB |
| SPIKE_2_iN_S17_L003_R1_001.fastq.gz | OTHER | 675.1 MB |
| SPIKE_2_IP_S34_L003_R1_001.fastq.gz | OTHER | 668.7 MB |
| SPIKE_2_IP_S34_L003_R1_001.fastq.gz | OTHER | 668.7 MB |
| SPIKE_2_IP_S34_L003_R1_001.fastq.gz | OTHER | 668.7 MB |
| SPIKE_2_IP_S34_L003_R1_001.fastq.gz | OTHER | 668.7 MB |
| SRR14344084.lite | OTHER | 307.1 MB |
| SRR14344084.lite | OTHER | 307.1 MB |
| SRR14344093.lite | OTHER | 1.9 GB |
| SRR14344093.lite | OTHER | 1.9 GB |
| SRR14344098.lite | OTHER | 512.9 MB |
| SRR14344098.lite | OTHER | 512.9 MB |
| SRR14344110.lite | OTHER | 2.4 GB |
| SRR14344110.lite | OTHER | 2.4 GB |
| SRR14344127 | OTHER | 2.7 GB |
| SRR14344127 | OTHER | 2.7 GB |
| Vero_N-1-IN_S13_L001_R1_001.fastq.gz | OTHER | 1.9 GB |
| Vero_N-1-IN_S13_L001_R1_001.fastq.gz | OTHER | 1.9 GB |
| Vero_N-1-IN_S13_L001_R1_001.fastq.gz | OTHER | 1.9 GB |
| Vero_N-1-IN_S13_L001_R1_001.fastq.gz | OTHER | 1.9 GB |
| Vero_N-1-IP_S5_L001_R1_001.fastq.gz | OTHER | 1.6 GB |
| Vero_N-1-IP_S5_L001_R1_001.fastq.gz | OTHER | 1.6 GB |
| Vero_N-1-IP_S5_L001_R1_001.fastq.gz | OTHER | 1.6 GB |
| Vero_N-1-IP_S5_L001_R1_001.fastq.gz | OTHER | 1.6 GB |
| Vero_N-2-IN_S14_L001_R1_001.fastq.gz | OTHER | 1.4 GB |
| Vero_N-2-IN_S14_L001_R1_001.fastq.gz | OTHER | 1.4 GB |
| Vero_N-2-IN_S14_L001_R1_001.fastq.gz | OTHER | 1.4 GB |
| Vero_N-2-IN_S14_L001_R1_001.fastq.gz | OTHER | 1.4 GB |
| Vero_N-2-IP_S6_L001_R1_001.fastq.gz | OTHER | 1.8 GB |
| Vero_N-2-IP_S6_L001_R1_001.fastq.gz | OTHER | 1.8 GB |
| Vero_N-2-IP_S6_L001_R1_001.fastq.gz | OTHER | 1.8 GB |
| Vero_N-2-IP_S6_L001_R1_001.fastq.gz | OTHER | 1.8 GB |
| Vero_NSP12-1-IN_S11_L001_R1_001.fastq.gz | OTHER | 2.3 GB |
| Vero_NSP12-1-IN_S11_L001_R1_001.fastq.gz | OTHER | 2.3 GB |
| Vero_NSP12-1-IN_S11_L001_R1_001.fastq.gz | OTHER | 2.3 GB |
| Vero_NSP12-1-IN_S11_L001_R1_001.fastq.gz | OTHER | 2.3 GB |
| Vero_NSP12-1-IP_S3_L001_R1_001.fastq.gz | OTHER | 2.2 GB |
| Vero_NSP12-1-IP_S3_L001_R1_001.fastq.gz | OTHER | 2.2 GB |
| Vero_NSP12-1-IP_S3_L001_R1_001.fastq.gz | OTHER | 2.2 GB |
| Vero_NSP12-1-IP_S3_L001_R1_001.fastq.gz | OTHER | 2.2 GB |
| Vero_NSP12-2-IN_S12_L001_R1_001.fastq.gz | OTHER | 2.7 GB |
| Vero_NSP12-2-IN_S12_L001_R1_001.fastq.gz | OTHER | 2.7 GB |
| Vero_NSP12-2-IP_S4_L001_R1_001.fastq.gz | OTHER | 1.9 GB |
| Vero_NSP12-2-IP_S4_L001_R1_001.fastq.gz | OTHER | 1.9 GB |
| Vero_NSP12-2-IP_S4_L001_R1_001.fastq.gz | OTHER | 1.9 GB |
| Vero_NSP12-2-IP_S4_L001_R1_001.fastq.gz | OTHER | 1.9 GB |
| Vero_NSP8-1-IN_S9_L001_R1_001.fastq.gz | OTHER | 2.0 GB |
| Vero_NSP8-1-IN_S9_L001_R1_001.fastq.gz | OTHER | 2.0 GB |
| Vero_NSP8-1-IN_S9_L001_R1_001.fastq.gz | OTHER | 2.0 GB |
| Vero_NSP8-1-IN_S9_L001_R1_001.fastq.gz | OTHER | 2.0 GB |
| Vero_NSP8-1-IP_S1_L001_R1_001.fastq.gz | OTHER | 2.2 GB |
| Vero_NSP8-1-IP_S1_L001_R1_001.fastq.gz | OTHER | 2.2 GB |
| Vero_NSP8-1-IP_S1_L001_R1_001.fastq.gz | OTHER | 2.2 GB |
| Vero_NSP8-1-IP_S1_L001_R1_001.fastq.gz | OTHER | 2.2 GB |
| Vero_NSP8-2-IN_S10_L001_R1_001.fastq.gz | OTHER | 2.0 GB |
| Vero_NSP8-2-IN_S10_L001_R1_001.fastq.gz | OTHER | 2.0 GB |
| Vero_NSP8-2-IN_S10_L001_R1_001.fastq.gz | OTHER | 2.0 GB |
| Vero_NSP8-2-IN_S10_L001_R1_001.fastq.gz | OTHER | 2.0 GB |
| Vero_NSP8-2-IP_S2_L001_R1_001.fastq.gz | OTHER | 3.2 GB |
| Vero_NSP8-2-IP_S2_L001_R1_001.fastq.gz | OTHER | 3.2 GB |
| Vero_NSP8-2-IP_S2_L001_R1_001.fastq.gz | OTHER | 3.2 GB |
| Vero_NSP8-2-IP_S2_L001_R1_001.fastq.gz | OTHER | 3.2 GB |
| WTH_1_IN_S13_L003_R1_001.fastq.gz | OTHER | 631.3 MB |
| WTH_1_IN_S13_L003_R1_001.fastq.gz | OTHER | 631.3 MB |
| WTH_1_IN_S13_L003_R1_001.fastq.gz | OTHER | 631.3 MB |
| WTH_1_IN_S13_L003_R1_001.fastq.gz | OTHER | 631.3 MB |
| WTH_1_IP_S30_L003_R1_001.fastq.gz | OTHER | 689.2 MB |
| WTH_1_IP_S30_L003_R1_001.fastq.gz | OTHER | 689.2 MB |
| WTH_1_IP_S30_L003_R1_001.fastq.gz | OTHER | 689.2 MB |
| WTH_1_IP_S30_L003_R1_001.fastq.gz | OTHER | 689.2 MB |
| WTH_2_iN_S12_L003_R1_001.fastq.gz | OTHER | 765.8 MB |
| WTH_2_iN_S12_L003_R1_001.fastq.gz | OTHER | 765.8 MB |
| WTH_2_iN_S12_L003_R1_001.fastq.gz | OTHER | 765.8 MB |
| WTH_2_iN_S12_L003_R1_001.fastq.gz | OTHER | 765.8 MB |
| WTH_2_IP_S24_L003_R1_001.fastq.gz | OTHER | 447.4 MB |
| WTH_2_IP_S24_L003_R1_001.fastq.gz | OTHER | 447.4 MB |
| WTH_2_IP_S24_L003_R1_001.fastq.gz | OTHER | 447.4 MB |
| WTH_2_IP_S24_L003_R1_001.fastq.gz | OTHER | 447.4 MB |
| WT-high-IN1_S92_L002_R1_001.fastq.gz | OTHER | 580.9 MB |
| WT-high-IN1_S92_L002_R1_001.fastq.gz | OTHER | 580.9 MB |
| WT-high-IN1_S92_L002_R1_001.fastq.gz | OTHER | 580.9 MB |
| WT-high-IN1_S92_L002_R1_001.fastq.gz | OTHER | 580.9 MB |
| WT-high-IN2_S93_L002_R1_001.fastq.gz | OTHER | 494.1 MB |
| WT-high-IN2_S93_L002_R1_001.fastq.gz | OTHER | 494.1 MB |
| WT-high-IN2_S93_L002_R1_001.fastq.gz | OTHER | 494.1 MB |
| WT-high-IN2_S93_L002_R1_001.fastq.gz | OTHER | 494.1 MB |
| WT-high-IP1_S71_L002_R1_001.fastq.gz | OTHER | 884.3 MB |
| WT-high-IP1_S71_L002_R1_001.fastq.gz | OTHER | 884.3 MB |
| WT-high-IP1_S71_L002_R1_001.fastq.gz | OTHER | 884.3 MB |
| WT-high-IP1_S71_L002_R1_001.fastq.gz | OTHER | 884.3 MB |
| WTL_1_IN_S10_L003_R1_001.fastq.gz | OTHER | 610.6 MB |
| WTL_1_IN_S10_L003_R1_001.fastq.gz | OTHER | 610.6 MB |
| WTL_1_IN_S10_L003_R1_001.fastq.gz | OTHER | 610.6 MB |
| WTL_1_IN_S10_L003_R1_001.fastq.gz | OTHER | 610.6 MB |
| WTL_1_IP_S11_L003_R1_001.fastq.gz | OTHER | 393.3 MB |
| WTL_1_IP_S11_L003_R1_001.fastq.gz | OTHER | 393.3 MB |
| WTL_1_IP_S11_L003_R1_001.fastq.gz | OTHER | 393.3 MB |
| WTL_1_IP_S11_L003_R1_001.fastq.gz | OTHER | 393.3 MB |
| WTL_2_iN_S20_L003_R1_001.fastq.gz | OTHER | 558.5 MB |
| WTL_2_iN_S20_L003_R1_001.fastq.gz | OTHER | 558.5 MB |
| WTL_2_iN_S20_L003_R1_001.fastq.gz | OTHER | 558.5 MB |
| WTL_2_iN_S20_L003_R1_001.fastq.gz | OTHER | 558.5 MB |
| WTL_2_IP_S21_L003_R1_001.fastq.gz | OTHER | 686.8 MB |
| WTL_2_IP_S21_L003_R1_001.fastq.gz | OTHER | 686.8 MB |
| WTL_2_IP_S21_L003_R1_001.fastq.gz | OTHER | 686.8 MB |
| WTL_2_IP_S21_L003_R1_001.fastq.gz | OTHER | 686.8 MB |
| WT-low-IN1_S90_L002_R1_001.fastq.gz | OTHER | 459.6 MB |
| WT-low-IN1_S90_L002_R1_001.fastq.gz | OTHER | 459.6 MB |
| WT-low-IN1_S90_L002_R1_001.fastq.gz | OTHER | 459.6 MB |
| WT-low-IN1_S90_L002_R1_001.fastq.gz | OTHER | 459.6 MB |
| WT-low-IN2_S91_L002_R1_001.fastq.gz | OTHER | 569.8 MB |
| WT-low-IN2_S91_L002_R1_001.fastq.gz | OTHER | 569.8 MB |
| WT-low-IN2_S91_L002_R1_001.fastq.gz | OTHER | 569.8 MB |
| WT-low-IN2_S91_L002_R1_001.fastq.gz | OTHER | 569.8 MB |
| WT-low-IP1_S69_L002_R1_001.fastq.gz | OTHER | 1.0 GB |
| WT-low-IP1_S69_L002_R1_001.fastq.gz | OTHER | 1.0 GB |
| WT-low-IP1_S69_L002_R1_001.fastq.gz | OTHER | 1.0 GB |
| WT-low-IP1_S69_L002_R1_001.fastq.gz | OTHER | 1.0 GB |
| WT-low-IP2_S70_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| WT-low-IP2_S70_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| WT-low-IP2_S70_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
| WT-low-IP2_S70_L002_R1_001.fastq.gz | OTHER | 1.1 GB |
Discovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins
Homo sapiensDiscovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins [RNA-Seq]
Homo sapiens16 data files
| File | Type | Size |
|---|---|---|
| A549-APO-moi-3_S9_L004_R1_001.fastq.gz | RNA-Seq | 11.7 GB |
| A549-APO-moi-3_S9_L004_R1_001.fastq.gz | RNA-Seq | 11.7 GB |
| A549-APO-moi-3_S9_L004_R1_001.fastq.gz | RNA-Seq | 11.7 GB |
| A549-APO-moi-3_S9_L004_R1_001.fastq.gz | RNA-Seq | 11.7 GB |
| Veros-APO-moi-0p1_S1_L004_R1_001.fastq.gz | RNA-Seq | 14.2 GB |
| Veros-APO-moi-0p1_S1_L004_R1_001.fastq.gz | RNA-Seq | 14.2 GB |
| Veros-APO-moi-0p1_S1_L004_R1_001.fastq.gz | RNA-Seq | 14.2 GB |
| Veros-APO-moi-0p1_S1_L004_R1_001.fastq.gz | RNA-Seq | 14.2 GB |
| WT-1__S34_L004_R1_001.fastq.gz | RNA-Seq | 635.4 MB |
| WT-1__S34_L004_R1_001.fastq.gz | RNA-Seq | 635.4 MB |
| WT-1__S34_L004_R1_001.fastq.gz | RNA-Seq | 635.4 MB |
| WT-1__S34_L004_R1_001.fastq.gz | RNA-Seq | 635.4 MB |
| WT-2_S21_L004_R1_001.fastq.gz | RNA-Seq | 6.0 GB |
| WT-2_S21_L004_R1_001.fastq.gz | RNA-Seq | 6.0 GB |
| WT-2_S21_L004_R1_001.fastq.gz | RNA-Seq | 6.0 GB |
| WT-2_S21_L004_R1_001.fastq.gz | RNA-Seq | 6.0 GB |
Discovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins [Ribo-Seq]
Homo sapiens16 data files
| File | Type | Size |
|---|---|---|
| Ctrl-input-1_S43_L002_R1_001.fastq.gz | OTHER | 1.3 GB |
| Ctrl-input-1_S43_L002_R1_001.fastq.gz | OTHER | 1.3 GB |
| Ctrl-input-2_S44_L002_R1_001.fastq.gz | OTHER | 1.3 GB |
| Ctrl-input-2_S44_L002_R1_001.fastq.gz | OTHER | 1.3 GB |
| Ctrl-poly-1_S49_L002_R1_001.fastq.gz | OTHER | 2.0 GB |
| Ctrl-poly-1_S49_L002_R1_001.fastq.gz | OTHER | 2.0 GB |
| Ctrl-poly-2_S50_L002_R1_001.fastq.gz | OTHER | 1.8 GB |
| Ctrl-poly-2_S50_L002_R1_001.fastq.gz | OTHER | 1.8 GB |
| ORF9c-input-1_S41_L002_R1_001.fastq.gz | OTHER | 1.4 GB |
| ORF9c-input-1_S41_L002_R1_001.fastq.gz | OTHER | 1.4 GB |
| ORF9c-input-2_S42_L002_R1_001.fastq.gz | OTHER | 1.6 GB |
| ORF9c-input-2_S42_L002_R1_001.fastq.gz | OTHER | 1.6 GB |
| ORF9c-poly-1_S47_L002_R1_001.fastq.gz | OTHER | 1.6 GB |
| ORF9c-poly-1_S47_L002_R1_001.fastq.gz | OTHER | 1.6 GB |
| ORF9c-poly-2_S48_L002_R1_001.fastq.gz | OTHER | 1.6 GB |
| ORF9c-poly-2_S48_L002_R1_001.fastq.gz | OTHER | 1.6 GB |