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3 results for “p53”

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  1. Zmat3 Is a Key Splicing Regulator in the p53 Tumor Suppression Program.

    Molecular cell · 2020 · 80(3): 452-469.e9

    Although TP53 is the most commonly mutated gene in human cancers, the p53-dependent transcriptional programs mediating tumor suppression remain incompletely understood. Here, to uncover critical components downstream of p53 in tumor suppression, we perform unbiased RNAi and CRISPR-Cas9-based genetic screens …

    PMID 33157015 DOI ↗

  2. A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.

    Scientific reports · 2019 · 9(1): 11071

    AATF is a central regulator of the cellular outcome upon p53 activation, a finding that has primarily been attributed to its function as a transcription factor. Recent data showed that AATF is essential for ribosome biogenesis and plays a role …

    PMID 31363146 DOI ↗

  3. Nol12 is a multifunctional RNA binding protein at the nexus of RNA and DNA metabolism.

    Nucleic acids research · 2017 · 45(21): 12509-12528

    To counteract the breakdown of genome integrity, eukaryotic cells have developed a network of surveillance pathways to prevent and resolve DNA damage. Recent data has recognized the importance of RNA binding proteins (RBPs) in DNA damage repair (DDR) pathways. Here, …

    PMID 29069457 DOI ↗

Datasets 11

GSE55727 GSE · GEO

Integrative Genomic Analysis Reveals Widespread Enhancer Regulation by p53 in Response to DNA Damage

Mus musculus · GPL9115

GSE46240 GSE · GEO

Global genomic profiling of p53-regulated genes

Mus musculus · GPL9185

GSE27901 GSE · GEO

Transactivation-deficient p53 Mutants in Ras-induced Cellular Senescence

Mus musculus · GPL1261

GSE147005 GSE · GEO

Loss of canonical splicing factor SRSF1 in hepatocytes results in acute liver injury and regeneration

Mus musculus · GPL21103

GSE220459 GSE · GEO

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size (RNA-seq NPC)

Mus musculus · GPL21103

GSE220460 GSE · GEO

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size (RNA-seq e13invivo)

Mus musculus · GPL21103

GSE220462 GSE · GEO

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size

Mus musculus · GPL21103

GSE220461 GSE · GEO

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size (scRNA-seq)

Mus musculus · GPL21103

GSE133479 GSE · GEO

Cancer avatars derived from genetically engineered pluripotent stem cells allow for longitudinal assessment of tumor development

Homo sapiens · GPL20301

GSE134597 GSE · GEO

Musashi1 is a master regulator of aberrant translation in Group 3 medulloblastoma

Homo sapiens · GPL20301

GSE253825 GSE · GEO

Nonsense-mediated mRNA decay counteracts TRP53 to maintain the progenitor cell pool for brain development (snRNA-seq_e15invivo)

Mus musculus · GPL21103

Analyses 13

GSE107122 Processing Pipeline

GSE107122 · 4 steps · RNA-Seq · code_examples

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size. (2024)

GSE210437 Processing Pipeline

GSE210437 · 9 steps · RNA-Seq · code_examples

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size. (2024)

GSE217735 Processing Pipeline

GSE217735 · 2 steps · OTHER · code_examples

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size. (2024)

GSE220459 Processing Pipeline

GSE220459 · 2 steps · RNA-Seq · code_examples

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size. (2024)

GSE220460 Processing Pipeline

GSE220460 · 2 steps · RNA-Seq · code_examples

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size. (2024)

GSE220461 Processing Pipeline

GSE220461 · 1 step · RNA-Seq · code_examples

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size. (2024)

GSE220462 Processing Pipeline

GSE220462 · 2 steps · GSE · code_examples

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size. (2024)

GSE253825 Processing Pipeline

GSE253825 · 1 step · RNA-Seq · code_examples

Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size. (2024)

GSE145430 Processing Pipeline

GSE145430 · 2 steps · RNA-Seq · code_examples

Zmat3 Is a Key Splicing Regulator in the p53 Tumor Suppression Program. (2020)

GSE14555 Processing Pipeline

GSE14555 · 2 steps · GSE · code_examples

Zmat3 Is a Key Splicing Regulator in the p53 Tumor Suppression Program. (2020)

GSE27901 Processing Pipeline

GSE27901 · 1 step · GSE · code_examples

Zmat3 Is a Key Splicing Regulator in the p53 Tumor Suppression Program. (2020)

GSE46240 Processing Pipeline

GSE46240 · 5 steps · RNA-Seq · code_examples

Zmat3 Is a Key Splicing Regulator in the p53 Tumor Suppression Program. (2020)

GSE55727 Processing Pipeline

GSE55727 · 5 steps · RNA-Seq · code_examples

Zmat3 Is a Key Splicing Regulator in the p53 Tumor Suppression Program. (2020)