Datasets (2527)
The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [CLIP-Seq]
Homo sapiens ["Expression profiling by high throughput sequencing", "Oth…RBM17 Mediates Evasion of Pro-Leukemic Factors from Splicing-coupled NMD to Enforce Leukemic Stem Cell Maintenance
Homo sapiens ["Expression profiling by high throughput sequencing"]RNA-Targeting CRISPR/Cas13d System Alleviates Disease-Related Phenotypes in Pre-clinical Models of Huntingtonâs Disease (Human).
Homo sapiens ["Expression profiling by high throughput sequencing"]Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size (RNA-seq e13invivo)
Mus musculus ["Expression profiling by high throughput sequencing"]Ythdf m6A readers compensate each other in a context dependent manner
Mus musculus ["Expression profiling by high throughput sequencing", "Oth…Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_human]
Homo sapiens ["Expression profiling by high throughput sequencing"]Global Identification of the miR-130a targetome in human HSPC Reveals a Novel Role for TBL1XR1 in Hematopoietic Stem Cell Self-Renewal and t(8;21) AML [CUT&RUN]
Homo sapiens ["Genome binding/occupancy profiling by high throughput seq…Footprinting SHAPE-eCLIP reveals transcriptome-wide hydrogen bonds at RNA-protein interfaces
Homo sapiens ["Other", "Third-party reanalysis"]Widespread RNA editing dysregulation in Autism Spectrum Disorders
Homo sapiens ["Expression profiling by high throughput sequencing"]Analysis of skeletal muscle gene expression upon mouse hindlimb unloading and reloading
Mus musculus ["Expression profiling by high throughput sequencing"]Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation.
Homo sapiens ["Other", "Expression profiling by high throughput sequenci…hESC-derived liver transcriptome analysis
Homo sapiens ["Expression profiling by high throughput sequencing"]Genome-wide maps of H3K27me3 in CD8 T cell subsets
Mus musculus ["Genome binding/occupancy profiling by high throughput seq…Crosstalk between CRISPR-Cas9 and the human transcriptome
Homo sapiens ["Expression profiling by high throughput sequencing"]AMPK regulation of Raptor and TSC2 mediate Metformin effects on transcriptional control of anabolism and inflammation
Mus musculus ["Expression profiling by high throughput sequencing", "Oth…Epigenetics CRISPRi screen in mouse neuronal progenitor cells (NPCs)
Mus musculus ["Other"]Autism-associated CHD8 controls reactive gliosis and neuroinflammation via remodeling chromatin in astrocytes [ATAC-seq]
Mus musculus ["Genome binding/occupancy profiling by high throughput seq…Expanded repertoire of RNA-editing-based detection for RNA binding protein interactions (5)
Homo sapiens ["Other"]Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes [NP]
Homo sapiens ["Expression profiling by high throughput sequencing"]SONAR discovers RNA binding proteins from analysis of large-scale protein-protein interactomes.
Homo sapiens ["Other"]Expanded repertoire of RNA-editing-based detection for RNA binding protein interactions (4)
Homo sapiens ["Expression profiling by high throughput sequencing"]HydRA: Deep-learning models for predicting RNA-binding capacity from protein interaction association context and protein sequence
Homo sapiens ["Other"]HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons [hnRNPA2B1_small_rnaseq]
Mus musculus ["Non-coding RNA profiling by high throughput sequencing"]LARP4 Is an RNA-Binding Protein That Binds Nuclear-Encoded Mitochondrial mRNAs To Promote Mitochondrial Function
Homo sapiens ["Other"]Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites [eCLIP - HepG2/K562 cells]
Homo sapiens ["Other"]