Datasets (2527)
mRNA expression data from differentiation of human ESCs into definitive endoderm, Cyt49 on matrigel
Homo sapiens ["Expression profiling by array"]LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance (splicing array)
Homo sapiens ["Expression profiling by array"]Transcriptome-pathology correlations predict CSNK1E-mediated TDP-43 phosphorylation in sporadic amyotrophic lateral sclerosis
Homo sapiens ["Expression profiling by high throughput sequencing"]LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance
Homo sapiens ["Expression profiling by array", "Expression profiling by …Disrupted processing of long pre-mRNAs and widespread RNA missplicing are components of neuronal vulnerability from loss of nuclear TDP-43
Mus musculus ["Genome binding/occupancy profiling by array", "Genome bin…Open chromatin regions at the single cell level of CD8+ T cells from the spleens of LCMV-Armstrong or LCMV-Clone 13 infected mice
Mus musculus ["Genome binding/occupancy profiling by high throughput seq…Nonsense-mediated mRNA decay counteracts TRP53 to maintain the progenitor cell pool for brain development (snRNA-seq_e15invivo)
Mus musculus ["Expression profiling by high throughput sequencing"]HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons [hnRNPA2B1_Arrays_mouse_SC]
Mus musculus ["Expression profiling by array"]Enhanced CLIP uncovers IMP protein-RNA targets in human pluripotent stem cells important for cell adhesion and survival [eCLIP-Seq]
Homo sapiens ["Other"]Pooled CRISPR screens with imaging on microRaft arrays reveals stress granule-regulatory factors
Homo sapiens ["Other"]RNA-Seq of circCDYL knockdown (KD) samples in HepG2, J82, and UMUC3 cells and of GRWD1, IGF2BP1, and IGF2BP2 knockdown (KD) samples in J82 and UMUC3 cells
Homo sapiens ["Expression profiling by high throughput sequencing"]Small intestine and colon tissue-resident memory CD8+ T cells exhibit transcriptional, epigenetic, and functional heterogeneity in concert with differential dependence on Eomesodermin
Mus musculus ["Genome binding/occupancy profiling by high throughput seq…MicroRNA expression data from differentiation of human Cyt49 ESCs into definitive endoderm on MEF feeder layers
Homo sapiens ["Non-coding RNA profiling by array"]CRISPR/Cas9-mediated integration enables TAG-eCLIP of endogenously tagged RNA binding proteins
Homo sapiens ["Expression profiling by high throughput sequencing"]Long-read Ribo-STAMP simultaneously measures transcription and translation at full length isoform resolution
Homo sapiens ["Expression profiling by high throughput sequencing"]Transcriptome analysis of diverse cell types infected with human cytomegalovirus [array]
Homo sapiens ["Expression profiling by array"]Discovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins [Ribo-Seq]
Homo sapiens ["Expression profiling by high throughput sequencing"]Cancer avatars derived from genetically engineered pluripotent stem cells allow for longitudinal assessment of tumor development
Homo sapiens ["Expression profiling by high throughput sequencing"]A role for alternative splicing in circadian control of insulin secretion and glucose homeostasis
Mus musculus ["Expression profiling by high throughput sequencing", "Gen…Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [Ribo-STAMP cell lines]
Homo sapiens ["Expression profiling by high throughput sequencing"]SLE lupus RNA-seq
Homo sapiens ["Expression profiling by high throughput sequencing"]The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [RNA-seq2]
Homo sapiens ["Expression profiling by high throughput sequencing"]RNA binding protein CPEB1 remodels host and viral RNA landscapes [RNA-Seq]
Homo sapiens ["Expression profiling by high throughput sequencing", "Oth…The LncRNA NEAT1 Nests RNA Binding Proteins and the Microprocessor to Globally Enhance Pri-miRNA Processing
Homo sapiens ["Other", "Non-coding RNA profiling by high throughput sequ…Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-based Regulation of Transcription [GRO-Seq]
Homo sapiens ["Expression profiling by high throughput sequencing"]