Datasets (2527)

Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [Cut&Run]

Divergent transcription from active promoters

Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [array]

Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs (microarray)

Enhanced CLIP uncovers IMP protein-RNA targets in human pluripotent stem cells important for cell adhesion and survival [RNA-Seq]

Musashi-2 attenuates AHR signalling to expand human haematopoietic stem cells

The Thermus thermophilus DEAD-box protein Hera is a general RNA chaperone and plays a key role in tRNA metabolism

Enhancing RNA base editing on mammalian transcripts with small nuclear RNAs

Direct RNA sequencing enables single-nucleotide m6A detection in endogenous transcript isoforms

Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-based Regulation of Transcription

Best practices for eCLIP experiments and analysis [poor quality]

Identification of the Global miR-130a Targetome Reveals a Novel Role for TBL1XR1 in Hematopoietic Stem Cell Self-Renewal and t(8;21) AML [miR-130a OE]

MECP2-related pathways are dysregulated in a cortical organoid model of Myotonic dystrophy [bulk RNA-Seq]

SOX9 targets in hESC-derived pancreatic progenitors

RNA-Seq of CD8+ T cell subsets during LCMV infection I

HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons [hnRNPA2B1_RNA-seq_mouse_SC]

RNA-Seq of isogenic human iPS cell-derived cardiomyocytes with RBM20 mutations created by genome editing (WTB RNA-Seq)

RNA-seq of metformin treatment in primary murine hepatocytes in WT, Raptor Ser-Ala mutant, Tsc2-null, Raptor mutant;Tsc2-null, and Ampk-null cells

Modeling the Neuropathology of Tuberous Sclerosis with Human Stem Cells Reveals a Role for Inflammation and Angiogenic Growth Factors

Widespread RNA editing dysregulation in Autism Spectrum Disorders II

Single-Cell Analyses Elucidate the Cellular and Molecular Landscape of Ulcerative Colitis

Best practices for eCLIP experiments and analysis [uncertain quality]

The long noncoding RNA Malat1 regulates CD8+ T cell differentiation by mediating epigenetic repression (GRID-Seq)

Disrupted processing of long pre-mRNAs and widespread RNA missplicing are components of neuronal vulnerability from loss of nuclear TDP-43 (CLIP)

The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells