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Datasets 25+
Inhibition of RNA splicing triggers CHMP7 nuclear entry impacting TDP-43 function and leading to onset of ALS (eCLIP).
Homo sapiens · GPL24676
Inhibition of RNA splicing triggers CHMP7 nuclear entry impacting TDP-43 function and leading to onset of ALS (RNA-Seq).
Homo sapiens · Illumina
Foxo1 regulates intestinal tissue-resident memory CD8 T cell biology in an anatomic compartment- and context-specific manner
GPL24247
RNA-seq on K562 cells treated with a CRISPR gRNA against PSMA1. (PSMA1-BGKcLV13)
Homo sapiens
RNA-seq on K562 cells treated with a CRISPR gRNA against SMAD5. (SMAD5-BGKcLV19)
Homo sapiens
RNA-seq on K562 cells treated with a CRISPR gRNA against SMAD2. (SMAD2-BGKcLV15)
Homo sapiens
RNA-seq on HepG2 cells treated with a CRISPR gRNA against SMAD2. (SMAD2-BGHcLV16)
Homo sapiens
RNA-seq on K562 cells treated with a CRISPR gRNA against SMAD4. (SMAD4-BGKcLV17)
Homo sapiens
RNA-seq on HepG2 cells treated with a CRISPR gRNA against SMAD5. (SMAD5-BGHcLV18)
Homo sapiens
RNA-seq on HepG2 cells treated with a CRISPR gRNA against SMAD4. (SMAD4-BGHcLV18)
Homo sapiens
RNA-seq on HepG2 cells treated with a CRISPR gRNA against PSMA1. (PSMA1-BGHcLV25)
Homo sapiens
The C. elegans neural editome reveals an ADAR target mRNA required for proper chemotaxis
6239 · GPL19757
A seven-gene signature aggregates a subgroup of stage II colon cancers with stage III.
Homo sapiens · GPL570
Colorectal cancer susceptibility loci as predictive markers of rectal cancer prognosis after surgery
Homo sapiens · GPL13497
Transcriptome-wide Profiling of Multiple RNA Modifications Simultaneously at Single-base Resolution
Homo sapiens · GPL15520
Definition of a Small Core Transcriptional Circuit Regulated by AML1-ETO [ChIP-seq, Cut&Run]
Homo sapiens · GPL24676
Definition of a Small Core Transcriptional Circuit Regulated by AML1-ETO [RNA-seq]
Homo sapiens · GPL18573
Transcriptional Survey of Ileal-Anal Pouch Immune Cells from Ulcerative Colitis
Homo sapiens · GPL20301
Single-cell analysis of Crohnâs disease lesions identifies a pathogenic cellular module associated with resistance to anti-TNF therapy
Homo sapiens · GPL18573
Proteomic discovery of chemical probes that perturb protein complexes in human cells
Homo sapiens · GPL24676
Proteomic discovery of chemical probes that perturb protein complexes in human cells II
Homo sapiens · GPL18573
Alternative polyadenylation mediates genetic regulation of gene expression
Homo sapiens · GPL18573
Remodeling of oncogenic transcriptomes by small-molecules targeting the RNA-binding protein NONO
Homo sapiens · GPL24676
An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [in_situ_STAMP]
Mus musculus · GPL24247
An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [eCLIP-seq ]
Mus musculus · GPL21103
Showing first 25 dataset results.
Analyses 16
GSE295421 · 3 steps · RNA-Seq · code_examples
Enhancing RNA base editing on mammalian transcripts with small nuclear RNAs. (2025)
GSE92332 · 8 steps · RNA-Seq · code_examples
Stratification of enterochromaffin cells by single-cell expression analysis. (2025)
GSE198212 · 7 steps · RIP-Seq · code_examples
Remodeling oncogenic transcriptomes by small molecules targeting NONO. (2023)
GSE198419 · 7 steps · RNA-Seq · code_examples
Remodeling oncogenic transcriptomes by small molecules targeting NONO. (2023)
GSE205549 · 3 steps · ATAC-seq · code_examples
Small intestine and colon tissue-resident memory CD8<sup>+</sup> T cells exhibit molecular heterogeneity and differential dependence on Eomes. (2023)
GSE205941 · 5 steps · OTHER · code_examples
Small intestine and colon tissue-resident memory CD8<sup>+</sup> T cells exhibit molecular heterogeneity and differential dependence on Eomes. (2023)
GSE205942 · 3 steps · GSE · code_examples
Small intestine and colon tissue-resident memory CD8<sup>+</sup> T cells exhibit molecular heterogeneity and differential dependence on Eomes. (2023)
GSE222216 · 4 steps · RNA-Seq · code_examples
Remodeling oncogenic transcriptomes by small molecules targeting NONO. (2023)
GSE222217 · 7 steps · GSE · code_examples
Remodeling oncogenic transcriptomes by small molecules targeting NONO. (2023)
GSE153264 · 3 steps · RNA-Seq · code_examples
Identification of the global miR-130a targetome reveals a role for TBL1XR1 in hematopoietic stem cell self-renewal and t(8;21) AML. (2022)
GSE153279 · 13 steps · OTHER · code_examples
Identification of the global miR-130a targetome reveals a role for TBL1XR1 in hematopoietic stem cell self-renewal and t(8;21) AML. (2022)
GSE184564 · 3 steps · RNA-Seq · code_examples
RNA binding protein DDX5 directs tuft cell specification and function to regulate microbial repertoire and disease susceptibility in the intestine. (2022)
GSE136911 · 2 steps · miRNA-Seq · code_examples
Suppression of Endothelial AGO1 Promotes Adipose Tissue Browning and Improves Metabolic Dysfunction. (2020)
GSE75128 · 7 steps · RNA-Seq · code_examples
A Small RNA-Catalytic Argonaute Pathway Tunes Germline Transcript Levels to Ensure Embryonic Divisions. (2016)
GSE86227 · 5 steps · ncRNA-Seq · code_examples
Protein-RNA Networks Regulated by Normal and ALS-Associated Mutant HNRNPA2B1 in the Nervous System. (2016)
GSE33584 · 2 steps · RNA-Seq · code_examples
High-resolution profiling and analysis of viral and host small RNAs during human cytomegalovirus infection. (2012)